FvH4_6g40090

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000113
Physical Location & Seq
Reverse (-)
31670445 .. 31672077
1633 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g40090.t1

Sequence Viewer

Length: 1146 bp
ATGTCAGACGCTCTCTCCAGTCGCCGGCAACAGGAGCTGGTTCTCTCCGGCATCGGGTCTCTTGATGATTTGGATGATGTCATCGCCGAGATTCTCTCCTGGCTACCTGTCAAATCTTTGCTCCGTTTCCGGTGTGTATGCAAGGCATGGCACGCATTGATATCCGAGTCTTATTTCGTCGACAAACACCTCCACCGCACCAAAATCAACCCACTACTCAAGAGGAAGAGTCACATTTTCCGATCCATAGAATACCAAGCATTGTTGAACTGTTTAAGTAATGATGGTCCTATTCTGAGCAGAGAGCTTGATTACCCGTTAATGAATCTACCAGTGAGTATTAAACCAGGAACATTTAATTGGGTGTTGATTGGTAGTTGCAATGGCTTGATATGTATACTAATTGATTGGTTTACTAAACTCGTTATGTTATGGAACCTATGTACTAGAATCTCCCAGGTATTACCGCAACCTTGTGATCTTGATTTTGACCTATGTTGTTTTGGATTCGGTTATGATTCCACAACCGATGATTACAAGGTAATACTAAATGGTATACTAAATGGTGGGGATTATTCGAGCGATCAATCTGTTGTCGTGTTCACAGTAAAAACTGGTTCATGGGGGAAGGTCAAAAGCGTGAAGAATTTTGCGGTGAGTGGCAGATCAGGTTATTTAGTTAACGAAGCTCTACATTGGGTATCTGGTAAGTATGACGAAGACAATAACTATATTTATTCAAATATAGTGTCGTTTGATTTAGCTGAGGAGAAAGTTCATGAGATTGCACTCCCGTTTCCTCCCAATCCGGTAGTCGGAGATATTTGGCGTGCTGAAGTTGGAACTCTCCGCAACTGTTTAGCCCTTCATGTTATAACCATGTATGACAGAGGTAGTAGTTGTGATCTCAAGATATGGGTGATGAAGGAATATGGAGTCAAGGAATCATGGACTCAAGTCATATATATTCCTTCAGAGAATCTACCAGAACATGATTATTTCTGCATGACATGCATTTCTGAGAGTGGTGAAGTTTTGATGGGTTCACATAGGCTCGGCAGTTTGATAATGTATAATTCAAAGAAATTTAGGATTTTGCCGTACGTGATTGATGGCTGGGATCGGATGAAAAAGCTACCTATGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

382

Amino Acids

43.37

Weight (kDa)

6.01

Isoelectric Point (pI)

43.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 25 - 59 1.6e-09 F-box domain
F-box-like PF12937 25 - 57 2e-07 F-box-like
FBA_1 PF07734 123 - 341 3.3e-19 F-box associated beta propeller domain
FBA_3 PF08268 124 - 350 6.5e-14 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000113)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G41473 AT3G16210
fragaria_vesca FvH4_1g00300 FvH4_1g03000 FvH4_1g03001 FvH4_2g08290 FvH4_2g08290 FvH4_3g33320 FvH4_3g33531 FvH4_3g40660 FvH4_3g41160 FvH4_4g09850 FvH4_4g09850 FvH4_4g09850 FvH4_6g33740 FvH4_6g33751 FvH4_6g39180 FvH4_6g39910 FvH4_6g39910 FvH4_6g39910 FvH4_6g39930 FvH4_6g39930 FvH4_6g40000 FvH4_6g40001 FvH4_6g40002 FvH4_6g40010 FvH4_6g40030 FvH4_6g40070 FvH4_6g40080 FvH4_6g40090 FvH4_6g47950 FvH4_6g47950 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g25410 FvH4_7g25772 FvH4_7g25790 FvH4_7g25790
malus_domestica MD00G1070000.v1.1 MD00G1070100.v1.1 MD02G1002000.v1.1 MD04G1162000.v1.1 MD09G1129200.v1.1 MD09G1144400.v1.1 MD09G1144500.v1.1 MD15G1145500.v1.1 MD17G1124300.v1.1
prunus_persica Prupe.1G567200_v2.0.a1 Prupe.3G191200_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1
pyrus_communis pycom02g00080 pycom02g00090 pycom09g05450 pycom09g06390 pycom15g13040 pycom15g13060 pycom17g11570
rosa_chinensis RchiOBHm_Chr1g0328801 RchiOBHm_Chr1g0347091 RchiOBHm_Chr1g0347101 RchiOBHm_Chr1g0347131 RchiOBHm_Chr1g0347171 RchiOBHm_Chr1g0347211 RchiOBHm_Chr1g0347321 RchiOBHm_Chr1g0347341 RchiOBHm_Chr1g0347361 RchiOBHm_Chr2g0084671 RchiOBHm_Chr2g0153011 RchiOBHm_Chr2g0154441 RchiOBHm_Chr2g0154521 RchiOBHm_Chr2g0154531 RchiOBHm_Chr2g0154541 RchiOBHm_Chr2g0154551 RchiOBHm_Chr2g0154561 RchiOBHm_Chr2g0154571 RchiOBHm_Chr2g0154581 RchiOBHm_Chr2g0154591 RchiOBHm_Chr2g0154601 RchiOBHm_Chr2g0154611 RchiOBHm_Chr2g0154621 RchiOBHm_Chr2g0154641 RchiOBHm_Chr2g0154651 RchiOBHm_Chr2g0154661 RchiOBHm_Chr2g0154671 RchiOBHm_Chr2g0154681 RchiOBHm_Chr2g0154711 RchiOBHm_Chr2g0167131 RchiOBHm_Chr5g0060681 RchiOBHm_Chr5g0060691 RchiOBHm_Chr5g0060711 RchiOBHm_Chr5g0061011 RchiOBHm_Chr6g0275741
rosa_laevigata RLG00000013437 RLG00000015630 RLG00000020778 RLG00000020784 RLG00000020785 RLG00000020787 RLG00000020788 RLG00000020790 RLG00000020791 RLG00000020792 RLG00000020794 RLG00000020795 RLG00000020796 RLG00000020797 RLG00000021699 RLG00000028755 RLG00000035394
rosa_multiflora Rmu_co8119446.1_g000001 Rmu_co8175998.1_g000001 Rmu_co8210288.1_g000001 Rmu_co8317779.1_g000001 Rmu_co8324277.1_g000001 Rmu_co8343471.1_g000001 Rmu_co8346313.1_g000001 Rmu_co8407145.1_g000001 Rmu_co8411851.1_g000001 Rmu_co8437621.1_g000001 Rmu_sc0000218.1_g000006 Rmu_sc0000640.1_g000006 Rmu_sc0000864.1_g000001 Rmu_sc0000864.1_g000002 Rmu_sc0000864.1_g000004 Rmu_sc0000864.1_g000007 Rmu_sc0001004.1_g000008 Rmu_sc0001004.1_g000016 Rmu_sc0001004.1_g000017 Rmu_sc0001004.1_g000023 Rmu_sc0001004.1_g000026 Rmu_sc0001004.1_g000027 Rmu_sc0001004.1_g000033 Rmu_sc0001004.1_g000034 Rmu_sc0001004.1_g000035 Rmu_sc0001027.1_g000008 Rmu_sc0001027.1_g000011 Rmu_sc0001027.1_g000015 Rmu_sc0001027.1_g000019 Rmu_sc0001027.1_g000021 Rmu_sc0001027.1_g000022 Rmu_sc0001027.1_g000023 Rmu_sc0001027.1_g000026 Rmu_sc0001027.1_g000028 Rmu_sc0001027.1_g000029 Rmu_sc0002705.1_g000031 Rmu_sc0002705.1_g000033 Rmu_sc0002705.1_g000036 Rmu_sc0002705.1_g000037 Rmu_sc0003808.1_g000017 Rmu_sc0003808.1_g000018 Rmu_sc0004001.1_g000015 Rmu_sc0006475.1_g000019 Rmu_sc0008818.1_g000006 Rmu_sc0013419.1_g000015 Rmu_sc0015771.1_g000021 Rmu_sc0016102.1_g000001 Rmu_sc0016442.1_g000001 Rmu_sc0016843.1_g000001 Rmu_sc0016843.1_g000002 Rmu_sc0032116.1_g000001
rosa_roxburghii Rroxscaffold_1G00019640 Rroxscaffold_1G00020010 Rroxscaffold_1G00020070 Rroxscaffold_1G00020110 Rroxscaffold_2G00083690 Rroxscaffold_2G00094170 Rroxscaffold_2G00094180 Rroxscaffold_2G00094190 Rroxscaffold_2G00094200 Rroxscaffold_2G00094210 Rroxscaffold_2G00094220 Rroxscaffold_2G00094230 Rroxscaffold_2G00094240 Rroxscaffold_2G00094250 Rroxscaffold_2G00094260 Rroxscaffold_2G00094330 Rroxscaffold_2G00155920 Rroxscaffold_3G00250730 Rroxscaffold_4G00307870 Rroxscaffold_4G00307880 Rroxscaffold_4G00307900 Rroxscaffold_4G00307910 Rroxscaffold_4G00307970 Rroxscaffold_7G00192940
rosa_rugosa Rorug01G0185500 Rorug01G0185600 Rorug01G0185900 Rorug01G0186100 Rorug02G0085700 Rorug02G0444400 Rorug02G0444600 Rorug02G0444700 Rorug02G0444700 Rorug02G0444800 Rorug04G0120600 Rorug05G0332700 Rorug05G0332800 Rorug05G0332900 Rorug05G0333000 Rorug05G0336000 Rorug06G0095900
rosa_samantha Rh2AG003200 Rh2BG004100 Rh2BG606800 Rh2CG004200 Rh2DG003900 Rh2DG531100 Rh6BG210600 Rh6CG214300 Rh6DG203900
rosa_wichuraiana Rw1G007390 Rw1G017020 Rw1G017100 Rw2G000310 Rw2G041790 Rw2G041850 Rw2G041860 Rw2G041870 Rw2G041880 Rw2G041890 Rw2G041900 Rw2G041920 Rw2G041940 Rw2G049600 Rw4G015020 Rw5G037320 Rw5G037330 Rw5G037340 Rw6G018130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 875
AccI GTMKAC 3 cut(s) 180, 397, 556
AciI CCGC 4 cut(s) 196, 467, 653, 850
AclWI GGATC 2 cut(s) 237, 1128
AcsI RAATTY 2 cut(s) 646, 1085
AcuI CTGAAG 2 cut(s) 855, 957
AfaI GTAC 2 cut(s) 445, 1103
AfiI CCNNNNNNNGG 4 cut(s) 24, 31, 54, 815
AgsI TTSAA 3 cut(s) 268, 741, 1080
AjnI CCWGG 3 cut(s) 98, 346, 456
AjuI GAANNNNNNNTTGG 2 cut(s) 343, 375
AluBI AGCT 5 cut(s) 37, 307, 689, 764, 1135
AluI AGCT 5 cut(s) 37, 307, 689, 764, 1135
Alw26I GTCTC 1 cut(s) 63
AlwI GGATC 2 cut(s) 237, 1128
AlwNI CAGNNNCTG 1 cut(s) 37
ApoI RAATTY 2 cut(s) 646, 1085
ArsI GACNNNNNNTTYG 2 cut(s) 734, 766
AspS9I GGNCC 1 cut(s) 287
AsuHPI GGTGA 3 cut(s) 667, 931, 1040
AvaII GGWCC 1 cut(s) 287
BbsI GAAGAC 1 cut(s) 726
BbvCI CCTCAGC 1 cut(s) 765
BccI CCATC 3 cut(s) 278, 1033, 1106
BceAI ACGGC 1 cut(s) 1084
BciT130I CCWGG 3 cut(s) 100, 348, 458
BcoDI GTCTC 1 cut(s) 63
BfaI CTAG 1 cut(s) 447
Bme1390I CCNGG 3 cut(s) 100, 348, 458
Bme18I GGWCC 1 cut(s) 287
BmgT120I GGNCC 1 cut(s) 287
BmiI GGNNCC 1 cut(s) 437
BmrFI CCNGG 3 cut(s) 100, 348, 458
BmsI GCATC 1 cut(s) 60
BoxI GACNNNNGTC 1 cut(s) 956
BpiI GAAGAC 1 cut(s) 726
BplI GAGNNNNNCTC 2 cut(s) 80, 112
Bpu10I CCTNAGC 1 cut(s) 765
BpuEI CTTGAG 3 cut(s) 203, 893, 939
BsaAI YACGTR 1 cut(s) 1105
BsaI GGTCTC 1 cut(s) 63
BsaJI CCNNGG 1 cut(s) 456
BsaWI WCCGGW 2 cut(s) 129, 808
BsaXI ACNNNNNCTCC 1 cut(s) 29
Bsc4I CCNNNNNNNGG 4 cut(s) 24, 31, 54, 815
Bse118I RCCGGY 1 cut(s) 24
Bse1I ACTGG 3 cut(s) 18, 332, 619
Bse3DI GCAATG 1 cut(s) 388
BseBI CCWGG 3 cut(s) 100, 348, 458
BseDI CCNNGG 1 cut(s) 456
BseGI GGATG 2 cut(s) 79, 1131
BseLI CCNNNNNNNGG 4 cut(s) 24, 31, 54, 815
BseMI GCAATG 1 cut(s) 388
BseMII CTCAG 3 cut(s) 287, 756, 1011
BseNI ACTGG 3 cut(s) 18, 332, 619
BseRI GAGGAG 1 cut(s) 782
BseYI CCCAGC 1 cut(s) 1116
BsiSI CCGG 4 cut(s) 25, 48, 130, 809
BsiWI CGTACG 1 cut(s) 1101
BslI CCNNNNNNNGG 4 cut(s) 24, 31, 54, 815
BsmAI GTCTC 1 cut(s) 63
Bso31I GGTCTC 1 cut(s) 63
Bsp143I GATC 6 cut(s) 242, 478, 583, 665, 904, 1120
BspACI CCGC 4 cut(s) 196, 467, 653, 850
BspCNI CTCAG 3 cut(s) 288, 757, 1012
BspHI TCATGA 1 cut(s) 778
BspLI GGNNCC 1 cut(s) 437
BspPI GGATC 2 cut(s) 237, 1128
BspTNI GGTCTC 1 cut(s) 63
BsrDI GCAATG 1 cut(s) 388
BsrFI RCCGGY 1 cut(s) 24
BsrI ACTGG 3 cut(s) 18, 332, 619
BssAI RCCGGY 1 cut(s) 24
BssECI CCNNGG 1 cut(s) 456
BssMI GATC 6 cut(s) 242, 478, 583, 665, 904, 1120
BssNAI GTATAC 2 cut(s) 398, 557
Bst1107I GTATAC 2 cut(s) 398, 557
Bst2UI CCWGG 3 cut(s) 100, 348, 458
Bst4CI ACNGT 3 cut(s) 272, 607, 857
Bst6I CTCTTC 1 cut(s) 221
BstAPI GCANNNNNTGC 1 cut(s) 1011
BstBAI YACGTR 1 cut(s) 1105
BstC8I GCNNGC 3 cut(s) 26, 153, 831
BstDEI CTNAG 3 cut(s) 296, 765, 1020
BstF5I GGATG 2 cut(s) 79, 1131
BstKTI GATC 6 cut(s) 245, 481, 586, 668, 907, 1123
BstMAI GTCTC 1 cut(s) 63
BstMBI GATC 6 cut(s) 242, 478, 583, 665, 904, 1120
BstMWI GCNNNNNNNGC 3 cut(s) 34, 152, 1011
BstNI CCWGG 3 cut(s) 100, 348, 458
BstNSI RCATGY 1 cut(s) 1014
BstPAI GACNNNNGTC 1 cut(s) 956
BstSCI CCNGG 3 cut(s) 98, 346, 456
BstV2I GAAGAC 1 cut(s) 726
BstZ17I GTATAC 2 cut(s) 398, 557
BtgZI GCGATG 1 cut(s) 67
BtsCI GGATG 2 cut(s) 79, 1131
BtsIMutI CAGTG 1 cut(s) 339
Cac8I GCNNGC 3 cut(s) 26, 153, 831
CaiI CAGNNNCTG 1 cut(s) 37
CciI TCATGA 1 cut(s) 778
Cfr10I RCCGGY 1 cut(s) 24
Cfr13I GGNCC 1 cut(s) 287
CseI GACGC 1 cut(s) 17
Csp6I GTAC 2 cut(s) 444, 1102
CviAII CATG 9 cut(s) 147, 621, 779, 869, 880, 948, 992, 1006, 1011
CviQI GTAC 2 cut(s) 444, 1102
DdeI CTNAG 3 cut(s) 296, 765, 1020
DpnI GATC 6 cut(s) 244, 480, 585, 667, 906, 1122
DpnII GATC 6 cut(s) 242, 478, 583, 665, 904, 1120
Eam1104I CTCTTC 1 cut(s) 221
EarI CTCTTC 1 cut(s) 221
Eco31I GGTCTC 1 cut(s) 63
Eco32I GATATC 1 cut(s) 162
Eco47I GGWCC 1 cut(s) 287
Eco57I CTGAAG 2 cut(s) 855, 957
EcoRII CCWGG 3 cut(s) 98, 346, 456
EcoRV GATATC 1 cut(s) 162
EcoT22I ATGCAT 1 cut(s) 1016
FaeI CATG 9 cut(s) 150, 624, 782, 872, 883, 951, 995, 1009, 1014
FatI CATG 9 cut(s) 146, 620, 778, 868, 879, 947, 991, 1005, 1010
FblI GTMKAC 3 cut(s) 180, 397, 556
FokI GGATG 2 cut(s) 86, 1138
FspBI CTAG 1 cut(s) 447
GsaI CCCAGC 1 cut(s) 1120
HapII CCGG 4 cut(s) 25, 48, 130, 809
HgaI GACGC 1 cut(s) 17
Hin1II CATG 9 cut(s) 150, 624, 782, 872, 883, 951, 995, 1009, 1014
HincII GTYRAC 2 cut(s) 181, 682
HindII GTYRAC 2 cut(s) 181, 682
HpaI GTTAAC 1 cut(s) 682
HpaII CCGG 4 cut(s) 25, 48, 130, 809
HphI GGTGA 3 cut(s) 667, 931, 1040
Hpy166II GTNNAC 7 cut(s) 181, 398, 414, 557, 603, 682, 1046
Hpy188I TCNGA 8 cut(s) 7, 166, 242, 297, 818, 976, 1021, 1125
Hpy188III TCNNGA 5 cut(s) 62, 220, 482, 779, 910
Hpy8I GTNNAC 7 cut(s) 181, 398, 414, 557, 603, 682, 1046
Hpy99I CGWCG 1 cut(s) 182
HpyAV CCTTC 4 cut(s) 622, 875, 919, 981
HpyCH4III ACNGT 3 cut(s) 272, 607, 857
HpyCH4IV ACGT 1 cut(s) 1104
HpyCH4V TGCA 5 cut(s) 141, 381, 788, 1005, 1014
HpyF10VI GCNNNNNNNGC 3 cut(s) 34, 152, 1011
HpyF3I CTNAG 3 cut(s) 296, 765, 1020
HpySE526I ACGT 1 cut(s) 1104
Hsp92II CATG 9 cut(s) 150, 624, 782, 872, 883, 951, 995, 1009, 1014
KroI GCCGGC 1 cut(s) 24
KroNI GCCGGC 1 cut(s) 26
KspAI GTTAAC 1 cut(s) 682
Kzo9I GATC 6 cut(s) 242, 478, 583, 665, 904, 1120
LmnI GCTCC 2 cut(s) 34, 126
LweI GCATC 1 cut(s) 60
MaeI CTAG 1 cut(s) 447
MaeII ACGT 1 cut(s) 1104
MaeIII GTNAC 1 cut(s) 230
MalI GATC 6 cut(s) 244, 480, 585, 667, 906, 1122
MboI GATC 6 cut(s) 242, 478, 583, 665, 904, 1120
MboII GAAGA 3 cut(s) 238, 655, 731
MluCI AATT 5 cut(s) 358, 402, 646, 1075, 1085
MlyI GAGTC 4 cut(s) 176, 238, 945, 946
MmeI TCCRAC 2 cut(s) 796, 820
MnlI CCTC 5 cut(s) 200, 216, 760, 810, 884
Mph1103I ATGCAT 1 cut(s) 1016
MroNI GCCGGC 1 cut(s) 24
MseI TTAA 5 cut(s) 275, 320, 342, 357, 681
MspI CCGG 4 cut(s) 25, 48, 130, 809
MspR9I CCNGG 3 cut(s) 100, 348, 458
MvaI CCWGG 3 cut(s) 100, 348, 458
MwoI GCNNNNNNNGC 3 cut(s) 34, 152, 1011
NaeI GCCGGC 1 cut(s) 26
NdeII GATC 6 cut(s) 242, 478, 583, 665, 904, 1120
NgoMIV GCCGGC 1 cut(s) 24
NlaIII CATG 9 cut(s) 150, 624, 782, 872, 883, 951, 995, 1009, 1014
NlaIV GGNNCC 1 cut(s) 437
NmeAIII GCCGAG 2 cut(s) 112, 1035
NmuCI GTSAC 1 cut(s) 230
NsiI ATGCAT 1 cut(s) 1016
NspI RCATGY 1 cut(s) 1014
PagI TCATGA 1 cut(s) 778
PdiI GCCGGC 1 cut(s) 26
PfeI GAWTC 7 cut(s) 91, 325, 450, 507, 518, 944, 979
Pfl23II CGTACG 1 cut(s) 1101
PleI GAGTC 4 cut(s) 175, 237, 944, 946
PpsI GAGTC 4 cut(s) 175, 237, 944, 946
Ppu21I YACGTR 1 cut(s) 1105
PshAI GACNNNNGTC 1 cut(s) 956
PsiI TTATAA 1 cut(s) 875
Psp6I CCWGG 3 cut(s) 98, 346, 456
PspFI CCCAGC 1 cut(s) 1116
PspGI CCWGG 3 cut(s) 98, 346, 456
PspLI CGTACG 1 cut(s) 1101
PspN4I GGNNCC 1 cut(s) 437
PspPI GGNCC 1 cut(s) 287
PstNI CAGNNNCTG 1 cut(s) 37
RsaI GTAC 2 cut(s) 445, 1103
RsaNI GTAC 2 cut(s) 444, 1102
SalI GTCGAC 1 cut(s) 179
SaqAI TTAA 5 cut(s) 275, 320, 342, 357, 681
Sau3AI GATC 6 cut(s) 242, 478, 583, 665, 904, 1120
Sau96I GGNCC 1 cut(s) 287
SchI GAGTC 4 cut(s) 176, 238, 945, 946
ScrFI CCNGG 3 cut(s) 100, 348, 458
SfaNI GCATC 1 cut(s) 60
SinI GGWCC 1 cut(s) 287
SmlI CTYRAG 3 cut(s) 218, 908, 954
SmoI CTYRAG 3 cut(s) 218, 908, 954
Sse9I AATT 5 cut(s) 358, 402, 646, 1075, 1085
SsiI CCGC 4 cut(s) 196, 467, 653, 850
SspMI CTAG 1 cut(s) 447
StyD4I CCNGG 3 cut(s) 98, 346, 456
TaaI ACNGT 3 cut(s) 272, 607, 857
TaiI ACGT 1 cut(s) 1107
TaqI TCGA 2 cut(s) 180, 578
TasI AATT 5 cut(s) 358, 402, 646, 1075, 1085
TatI WGTACW 1 cut(s) 443
TfiI GAWTC 7 cut(s) 91, 325, 450, 507, 518, 944, 979
Tru1I TTAA 5 cut(s) 275, 320, 342, 357, 681
Tru9I TTAA 5 cut(s) 275, 320, 342, 357, 681
TscAI CASTG 1 cut(s) 339
TseFI GTSAC 1 cut(s) 230
Tsp45I GTSAC 1 cut(s) 230
TspDTI ATGAA 6 cut(s) 338, 609, 767, 857, 938, 1142
TspGWI ACGGA 1 cut(s) 113
TspRI CASTG 1 cut(s) 339
VpaK11BI GGWCC 1 cut(s) 287
XapI RAATTY 2 cut(s) 646, 1085
XceI RCATGY 1 cut(s) 1014
XmiI GTMKAC 3 cut(s) 180, 397, 556
XspI CTAG 1 cut(s) 447
Zsp2I ATGCAT 1 cut(s) 1016
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.