MD15G1145500.v1.1

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0000113
Physical Location & Seq
Forward (+)
10815950 .. 10817299
1350 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1145500.v1.1.491

Sequence Viewer

Length: 1350 bp
ATGGGAACCTTATTGGATCATTCCAATATGCATAATGAACACGATGATCAGAGGCAGCTTCCCTATGAGATTGTGGAGGAAATTCTGCTGCAACTGCCGGTGAAGTCCCTCCTTCGTTTCAGAAGCGTATGCAAGCCATGGCTTGCTCTCATCTCCGACCCAAAGTTTGTCAAGTCACACCTCCTTATCCGCTCTACCAAACAAGACGACGATGACGATGATTGTGCTCATGATCATGATGCTCACGGCAAAACTACATCGTCAAGAGCACGACTCTTGCTCTCCTCTTTGTCCCTCCTCCAGTCCGTCCACGTACAAGTTCTCAATACCACTACTATTGATGCACCCGCAACAGCAACAGCAACCTTGCCATCCCGTGGCGACGGTGAAGGAGAAAGTCTAGCAGAAGCAAGGGCAGAAACAGAAACGAAGGCAGAAGCAGCCGGCACAACTGGTGTTAATAGTACTACTAGGGTCGTGGAGGCGGAGCATGAGTACTCTGTGACAATGAGGCGGCCGGTCAAAGACATGAAGATTGTAGGCTCTTGTAACGGCCTAGTGTGTTTGGTGGTTGACTCGGAAGATATGATGATTTATAATCCATCCACCAGGCAGGTTCATGCAGCCCCAAAATTGGCGACAATCTGCGGCAAGGATTATTTCTATGGCTTCGGTTACGATTCGCGCAAGGAAGACTATAAAATAGTGAGGGCCACTTCTTCAAGCAAGGCCGGCGTTTTCGCCACCCAACTTGACATTTATTCTTTGAAGACCAATACATGGAGAGCCAGGTCCGAAACCCTGCCTTTTTACTTTCTGTTCAACCTTGTCGGAACCCTACTCAACGGGGCTCTCCACTGGGCAGTCCGCCGCGGAAAGACTACTGATCAAGCTTACGCAAACGGTGATGATGAGAGGCCTTTCTCAATCGTTTCTTTCGATATAACGGAGGAGACGTACCGGCAAGTTCCCCTACCGGGCGACGGCGACAAAAATTTCTCGTTCTATGGTTTGGGGGTTTTAGGAGGGCGGCTGAGTATGCTTCACAGCCCTCATGGGTCTGATTACCAGGTGTGGTTAATGAATGAGTACGGGGTCAAGGCATCTTGGTCTATTTTCACTACCATTCCGCAGAAGATGGATTCTGAATACCTAGGGCTGATGTCACTTCTGAGTATTTTGAAGAACGGGGAGATGCTAATCCTCTTGCATCAAAGGAAACTAGTCATTTACAATCCGGCAGACAGAAACTTCCGAGCCGTCTTTGCCGGGGATGTACACTCTTCTCAAGTGGCTTTGTACATGGAGAGCCTTGCTTCACCCACCATGAAATACTCCATGGTCAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

450

Amino Acids

50.14

Weight (kDa)

6.11

Isoelectric Point (pI)

39.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 19 - 57 4.9e-10 F-box domain
F-box-like PF12937 19 - 56 2.3e-07 F-box-like
FBA_1 PF07734 158 - 438 1.1e-28 F-box associated beta propeller domain
FBA_3 PF08268 163 - 429 5.3e-23 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000113)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G41473 AT3G16210
fragaria_vesca FvH4_1g00300 FvH4_1g03000 FvH4_1g03001 FvH4_2g08290 FvH4_2g08290 FvH4_3g33320 FvH4_3g33531 FvH4_3g40660 FvH4_3g41160 FvH4_4g09850 FvH4_4g09850 FvH4_4g09850 FvH4_6g33740 FvH4_6g33751 FvH4_6g39180 FvH4_6g39910 FvH4_6g39910 FvH4_6g39910 FvH4_6g39930 FvH4_6g39930 FvH4_6g40000 FvH4_6g40001 FvH4_6g40002 FvH4_6g40010 FvH4_6g40030 FvH4_6g40070 FvH4_6g40080 FvH4_6g40090 FvH4_6g47950 FvH4_6g47950 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g25410 FvH4_7g25772 FvH4_7g25790 FvH4_7g25790
malus_domestica MD00G1070000.v1.1 MD00G1070100.v1.1 MD02G1002000.v1.1 MD04G1162000.v1.1 MD09G1129200.v1.1 MD09G1144400.v1.1 MD09G1144500.v1.1 MD15G1145500.v1.1 MD17G1124300.v1.1
prunus_persica Prupe.1G567200_v2.0.a1 Prupe.3G191200_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1
pyrus_communis pycom02g00080 pycom02g00090 pycom09g05450 pycom09g06390 pycom15g13040 pycom15g13060 pycom17g11570
rosa_chinensis RchiOBHm_Chr1g0328801 RchiOBHm_Chr1g0347091 RchiOBHm_Chr1g0347101 RchiOBHm_Chr1g0347131 RchiOBHm_Chr1g0347171 RchiOBHm_Chr1g0347211 RchiOBHm_Chr1g0347321 RchiOBHm_Chr1g0347341 RchiOBHm_Chr1g0347361 RchiOBHm_Chr2g0084671 RchiOBHm_Chr2g0153011 RchiOBHm_Chr2g0154441 RchiOBHm_Chr2g0154521 RchiOBHm_Chr2g0154531 RchiOBHm_Chr2g0154541 RchiOBHm_Chr2g0154551 RchiOBHm_Chr2g0154561 RchiOBHm_Chr2g0154571 RchiOBHm_Chr2g0154581 RchiOBHm_Chr2g0154591 RchiOBHm_Chr2g0154601 RchiOBHm_Chr2g0154611 RchiOBHm_Chr2g0154621 RchiOBHm_Chr2g0154641 RchiOBHm_Chr2g0154651 RchiOBHm_Chr2g0154661 RchiOBHm_Chr2g0154671 RchiOBHm_Chr2g0154681 RchiOBHm_Chr2g0154711 RchiOBHm_Chr2g0167131 RchiOBHm_Chr5g0060681 RchiOBHm_Chr5g0060691 RchiOBHm_Chr5g0060711 RchiOBHm_Chr5g0061011 RchiOBHm_Chr6g0275741
rosa_laevigata RLG00000013437 RLG00000015630 RLG00000020778 RLG00000020784 RLG00000020785 RLG00000020787 RLG00000020788 RLG00000020790 RLG00000020791 RLG00000020792 RLG00000020794 RLG00000020795 RLG00000020796 RLG00000020797 RLG00000021699 RLG00000028755 RLG00000035394
rosa_multiflora Rmu_co8119446.1_g000001 Rmu_co8175998.1_g000001 Rmu_co8210288.1_g000001 Rmu_co8317779.1_g000001 Rmu_co8324277.1_g000001 Rmu_co8343471.1_g000001 Rmu_co8346313.1_g000001 Rmu_co8407145.1_g000001 Rmu_co8411851.1_g000001 Rmu_co8437621.1_g000001 Rmu_sc0000218.1_g000006 Rmu_sc0000640.1_g000006 Rmu_sc0000864.1_g000001 Rmu_sc0000864.1_g000002 Rmu_sc0000864.1_g000004 Rmu_sc0000864.1_g000007 Rmu_sc0001004.1_g000008 Rmu_sc0001004.1_g000016 Rmu_sc0001004.1_g000017 Rmu_sc0001004.1_g000023 Rmu_sc0001004.1_g000026 Rmu_sc0001004.1_g000027 Rmu_sc0001004.1_g000033 Rmu_sc0001004.1_g000034 Rmu_sc0001004.1_g000035 Rmu_sc0001027.1_g000008 Rmu_sc0001027.1_g000011 Rmu_sc0001027.1_g000015 Rmu_sc0001027.1_g000019 Rmu_sc0001027.1_g000021 Rmu_sc0001027.1_g000022 Rmu_sc0001027.1_g000023 Rmu_sc0001027.1_g000026 Rmu_sc0001027.1_g000028 Rmu_sc0001027.1_g000029 Rmu_sc0002705.1_g000031 Rmu_sc0002705.1_g000033 Rmu_sc0002705.1_g000036 Rmu_sc0002705.1_g000037 Rmu_sc0003808.1_g000017 Rmu_sc0003808.1_g000018 Rmu_sc0004001.1_g000015 Rmu_sc0006475.1_g000019 Rmu_sc0008818.1_g000006 Rmu_sc0013419.1_g000015 Rmu_sc0015771.1_g000021 Rmu_sc0016102.1_g000001 Rmu_sc0016442.1_g000001 Rmu_sc0016843.1_g000001 Rmu_sc0016843.1_g000002 Rmu_sc0032116.1_g000001
rosa_roxburghii Rroxscaffold_1G00019640 Rroxscaffold_1G00020010 Rroxscaffold_1G00020070 Rroxscaffold_1G00020110 Rroxscaffold_2G00083690 Rroxscaffold_2G00094170 Rroxscaffold_2G00094180 Rroxscaffold_2G00094190 Rroxscaffold_2G00094200 Rroxscaffold_2G00094210 Rroxscaffold_2G00094220 Rroxscaffold_2G00094230 Rroxscaffold_2G00094240 Rroxscaffold_2G00094250 Rroxscaffold_2G00094260 Rroxscaffold_2G00094330 Rroxscaffold_2G00155920 Rroxscaffold_3G00250730 Rroxscaffold_4G00307870 Rroxscaffold_4G00307880 Rroxscaffold_4G00307900 Rroxscaffold_4G00307910 Rroxscaffold_4G00307970 Rroxscaffold_7G00192940
rosa_rugosa Rorug01G0185500 Rorug01G0185600 Rorug01G0185900 Rorug01G0186100 Rorug02G0085700 Rorug02G0444400 Rorug02G0444600 Rorug02G0444700 Rorug02G0444700 Rorug02G0444800 Rorug04G0120600 Rorug05G0332700 Rorug05G0332800 Rorug05G0332900 Rorug05G0333000 Rorug05G0336000 Rorug06G0095900
rosa_samantha Rh2AG003200 Rh2BG004100 Rh2BG606800 Rh2CG004200 Rh2DG003900 Rh2DG531100 Rh6BG210600 Rh6CG214300 Rh6DG203900
rosa_wichuraiana Rw1G007390 Rw1G017020 Rw1G017100 Rw2G000310 Rw2G041790 Rw2G041850 Rw2G041860 Rw2G041870 Rw2G041880 Rw2G041890 Rw2G041900 Rw2G041920 Rw2G041940 Rw2G049600 Rw4G015020 Rw5G037320 Rw5G037330 Rw5G037340 Rw6G018130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 597
Acc36I ACCTGC 1 cut(s) 604
AccB7I CCANNNNNTGG 2 cut(s) 377, 780
AccBSI CCGCTC 1 cut(s) 192
AccII CGCG 2 cut(s) 685, 873
AclWI GGATC 1 cut(s) 24
AcoI YGGCCR 1 cut(s) 515
AcsI RAATTY 2 cut(s) 81, 994
AfaI GTAC 7 cut(s) 315, 466, 497, 959, 1091, 1278, 1301
AfiI CCNNNNNNNGG 5 cut(s) 377, 634, 780, 977, 983
AgsI TTSAA 4 cut(s) 723, 769, 823, 1183
AhlI ACTAGT 1 cut(s) 1222
AjnI CCWGG 3 cut(s) 608, 788, 1068
AluBI AGCT 2 cut(s) 58, 893
AluI AGCT 2 cut(s) 58, 893
Alw21I GWGCWC 2 cut(s) 229, 271
Alw26I GTCTC 1 cut(s) 947
AlwI GGATC 1 cut(s) 24
AoxI GGCC 5 cut(s) 515, 553, 711, 729, 917
ApeKI GCWGC 4 cut(s) 55, 88, 440, 623
ApoI RAATTY 2 cut(s) 81, 994
ArsI GACNNNNNNTTYG 2 cut(s) 149, 181
AspA2I CCTAGG 1 cut(s) 1153
AspLEI GCGC 1 cut(s) 687
AspS9I GGNCC 2 cut(s) 711, 792
AsuC2I CCSGG 2 cut(s) 978, 1270
AsuHPI GGTGA 4 cut(s) 112, 398, 917, 1311
AvaII GGWCC 1 cut(s) 792
AvrII CCTAGG 1 cut(s) 1153
BanII GRGCYC 1 cut(s) 853
BbsI GAAGAC 2 cut(s) 699, 776
Bbv12I GWGCWC 2 cut(s) 229, 271
BbvI GCAGC 4 cut(s) 67, 75, 452, 635
BccI CCATC 3 cut(s) 379, 610, 1132
BceAI ACGGC 4 cut(s) 262, 568, 1000, 1244
BcgI CGANNNNNNTGC 2 cut(s) 206, 240
BciT130I CCWGG 3 cut(s) 610, 790, 1070
BclI TGATCA 3 cut(s) 46, 232, 886
BcnI CCSGG 2 cut(s) 978, 1270
BcoDI GTCTC 1 cut(s) 947
BcuI ACTAGT 1 cut(s) 1222
BfaI CTAG 5 cut(s) 401, 471, 557, 1154, 1223
BfuAI ACCTGC 1 cut(s) 604
BisI GCNGC 8 cut(s) 56, 89, 441, 515, 624, 649, 871, 1031
BlnI CCTAGG 1 cut(s) 1153
BlsI GCNGC 8 cut(s) 57, 90, 442, 516, 625, 650, 872, 1032
BmcAI AGTACT 2 cut(s) 466, 497
Bme1390I CCNGG 5 cut(s) 610, 790, 978, 1070, 1270
Bme18I GGWCC 1 cut(s) 792
BmgT120I GGNCC 2 cut(s) 711, 792
BmiI GGNNCC 2 cut(s) 7, 835
BmrFI CCNGG 5 cut(s) 610, 790, 978, 1070, 1270
BmrI ACTGGG 1 cut(s) 868
BmsI GCATC 5 cut(s) 229, 331, 1112, 1185, 1219
BmuI ACTGGG 1 cut(s) 868
BpiI GAAGAC 2 cut(s) 699, 776
BplI GAGNNNNNCTC 2 cut(s) 258, 290
BpmI CTGGAG 1 cut(s) 284
BpuEI CTTGAG 1 cut(s) 1272
BpuMI CCSGG 2 cut(s) 978, 1270
BsaAI YACGTR 1 cut(s) 313
BsaBI GATNNNNATC 1 cut(s) 1199
BsaJI CCNNGG 6 cut(s) 137, 376, 871, 1153, 1269, 1338
BsaXI ACNNNNNCTCC 4 cut(s) 479, 509, 941, 971
Bsc4I CCNNNNNNNGG 5 cut(s) 377, 634, 780, 977, 983
Bse118I RCCGGY 5 cut(s) 97, 443, 517, 731, 960
Bse1I ACTGG 3 cut(s) 301, 457, 863
Bse8I GATNNNNATC 1 cut(s) 1199
BseBI CCWGG 3 cut(s) 610, 790, 1070
BseDI CCNNGG 6 cut(s) 137, 376, 871, 1153, 1269, 1338
BseGI GGATG 3 cut(s) 371, 602, 1279
BseJI GATNNNNATC 1 cut(s) 1199
BseLI CCNNNNNNNGG 5 cut(s) 377, 634, 780, 977, 983
BseMII CTCAG 2 cut(s) 1025, 1163
BseNI ACTGG 3 cut(s) 301, 457, 863
BseRI GAGGAG 3 cut(s) 274, 287, 965
BseX3I CGGCCG 1 cut(s) 515
BseXI GCAGC 4 cut(s) 67, 75, 452, 635
Bsh1236I CGCG 2 cut(s) 685, 873
Bsh1285I CGRYCG 1 cut(s) 518
BshFI GGCC 5 cut(s) 517, 555, 713, 731, 919
BsiEI CGRYCG 1 cut(s) 518
BsiHKAI GWGCWC 2 cut(s) 229, 271
BsiSI CCGG 8 cut(s) 98, 444, 518, 732, 961, 977, 1238, 1269
BslFI GGGAC 2 cut(s) 91, 277
BslI CCNNNNNNNGG 5 cut(s) 377, 634, 780, 977, 983
BsmAI GTCTC 1 cut(s) 947
BsmBI CGTCTC 1 cut(s) 947
BsmFI GGGAC 2 cut(s) 91, 277
BsnI GGCC 5 cut(s) 517, 555, 713, 731, 919
Bsp1286I GDGCHC 3 cut(s) 229, 271, 853
Bsp1407I TGTACA 2 cut(s) 1276, 1299
Bsp143I GATC 4 cut(s) 16, 46, 232, 886
Bsp19I CCATGG 2 cut(s) 137, 1338
BspANI GGCC 5 cut(s) 517, 555, 713, 731, 919
BspCNI CTCAG 2 cut(s) 1026, 1164
BspFNI CGCG 2 cut(s) 685, 873
BspHI TCATGA 2 cut(s) 229, 235
BspLI GGNNCC 2 cut(s) 7, 835
BspMI ACCTGC 1 cut(s) 604
BspPI GGATC 1 cut(s) 24
BsrBI CCGCTC 1 cut(s) 192
BsrFI RCCGGY 5 cut(s) 97, 443, 517, 731, 960
BsrGI TGTACA 2 cut(s) 1276, 1299
BsrI ACTGG 3 cut(s) 301, 457, 863
BssAI RCCGGY 5 cut(s) 97, 443, 517, 731, 960
BssECI CCNNGG 6 cut(s) 137, 376, 871, 1153, 1269, 1338
BssMI GATC 4 cut(s) 16, 46, 232, 886
BssT1I CCWWGG 3 cut(s) 137, 1153, 1338
Bst2UI CCWGG 3 cut(s) 610, 790, 1070
Bst4CI ACNGT 2 cut(s) 386, 905
Bst6I CTCTTC 1 cut(s) 1288
BstAUI TGTACA 2 cut(s) 1276, 1299
BstBAI YACGTR 1 cut(s) 313
BstC8I GCNNGC 4 cut(s) 134, 144, 445, 733
BstDEI CTNAG 2 cut(s) 1034, 1172
BstDSI CCRYGG 4 cut(s) 137, 376, 871, 1338
BstF5I GGATG 3 cut(s) 371, 602, 1279
BstFNI CGCG 2 cut(s) 685, 873
BstHHI GCGC 1 cut(s) 687
BstKTI GATC 4 cut(s) 19, 49, 235, 889
BstMAI GTCTC 1 cut(s) 947
BstMBI GATC 4 cut(s) 16, 46, 232, 886
BstMCI CGRYCG 1 cut(s) 518
BstMWI GCNNNNNNNGC 5 cut(s) 94, 440, 732, 1039, 1265
BstNI CCWGG 3 cut(s) 610, 790, 1070
BstSCI CCNGG 5 cut(s) 608, 788, 976, 1068, 1268
BstUI CGCG 2 cut(s) 685, 873
BstV1I GCAGC 4 cut(s) 67, 75, 452, 635
BstV2I GAAGAC 2 cut(s) 699, 776
BstZI CGGCCG 1 cut(s) 515
BsuRI GGCC 5 cut(s) 517, 555, 713, 731, 919
BtgI CCRYGG 4 cut(s) 137, 376, 871, 1338
BtsCI GGATG 3 cut(s) 371, 602, 1279
BtsIMutI CAGTG 1 cut(s) 856
BveI ACCTGC 1 cut(s) 604
Cac8I GCNNGC 4 cut(s) 134, 144, 445, 733
CciI TCATGA 2 cut(s) 229, 235
CfoI GCGC 1 cut(s) 687
Cfr10I RCCGGY 5 cut(s) 97, 443, 517, 731, 960
Cfr13I GGNCC 2 cut(s) 711, 792
Cfr42I CCGCGG 1 cut(s) 874
CsiI ACCWGGT 1 cut(s) 1068
Csp6I GTAC 7 cut(s) 314, 465, 496, 958, 1090, 1277, 1300
CspCI CAANNNNNGTGG 4 cut(s) 319, 354, 733, 768
CviQI GTAC 7 cut(s) 314, 465, 496, 958, 1090, 1277, 1300
DdeI CTNAG 2 cut(s) 1034, 1172
DpnI GATC 4 cut(s) 18, 48, 234, 888
DpnII GATC 4 cut(s) 16, 46, 232, 886
EaeI YGGCCR 1 cut(s) 515
EagI CGGCCG 1 cut(s) 515
Eam1104I CTCTTC 1 cut(s) 1288
EarI CTCTTC 1 cut(s) 1288
EciI GGCGGA 2 cut(s) 500, 857
EclXI CGGCCG 1 cut(s) 515
Eco130I CCWWGG 3 cut(s) 137, 1153, 1338
Eco147I AGGCCT 1 cut(s) 919
Eco24I GRGCYC 1 cut(s) 853
Eco47I GGWCC 1 cut(s) 792
Eco52I CGGCCG 1 cut(s) 515
EcoRII CCWGG 3 cut(s) 608, 788, 1068
EcoT14I CCWWGG 3 cut(s) 137, 1153, 1338
EcoT22I ATGCAT 1 cut(s) 33
EcoT38I GRGCYC 1 cut(s) 853
ErhI CCWWGG 3 cut(s) 137, 1153, 1338
Esp3I CGTCTC 1 cut(s) 947
FaqI GGGAC 2 cut(s) 91, 277
FauI CCCGC 1 cut(s) 355
FbaI TGATCA 3 cut(s) 46, 232, 886
Fnu4HI GCNGC 8 cut(s) 56, 89, 441, 515, 624, 649, 871, 1031
FokI GGATG 3 cut(s) 358, 589, 1286
FriOI GRGCYC 1 cut(s) 853
Fsp4HI GCNGC 8 cut(s) 56, 89, 441, 515, 624, 649, 871, 1031
FspBI CTAG 5 cut(s) 401, 471, 557, 1154, 1223
GlaI GCGC 1 cut(s) 686
GluI GCNGC 8 cut(s) 56, 89, 441, 515, 624, 649, 871, 1031
GsuI CTGGAG 1 cut(s) 284
HaeIII GGCC 5 cut(s) 517, 555, 713, 731, 919
HapII CCGG 8 cut(s) 98, 444, 518, 732, 961, 977, 1238, 1269
HhaI GCGC 1 cut(s) 687
Hin6I GCGC 1 cut(s) 685
HinP1I GCGC 1 cut(s) 685
HincII GTYRAC 1 cut(s) 574
HindII GTYRAC 1 cut(s) 574
HindIII AAGCTT 1 cut(s) 891
HinfI GANTC 4 cut(s) 273, 575, 680, 1142
HpaII CCGG 8 cut(s) 98, 444, 518, 732, 961, 977, 1238, 1269
HphI GGTGA 4 cut(s) 112, 398, 917, 1311
Hpy166II GTNNAC 3 cut(s) 310, 574, 1279
Hpy188III TCNNGA 3 cut(s) 230, 236, 264
Hpy8I GTNNAC 3 cut(s) 310, 574, 1279
Hpy99I CGWCG 3 cut(s) 212, 386, 986
HpyAV CCTTC 3 cut(s) 122, 383, 424
HpyCH4III ACNGT 2 cut(s) 386, 905
HpyCH4IV ACGT 2 cut(s) 312, 956
HpyCH4V TGCA 6 cut(s) 31, 91, 132, 344, 623, 1210
HpyF10VI GCNNNNNNNGC 5 cut(s) 94, 440, 732, 1039, 1265
HpyF3I CTNAG 2 cut(s) 1034, 1172
HpySE526I ACGT 2 cut(s) 312, 956
HspAI GCGC 1 cut(s) 685
KroI GCCGGC 2 cut(s) 443, 731
KroNI GCCGGC 2 cut(s) 445, 733
Ksp22I TGATCA 3 cut(s) 46, 232, 886
KspI CCGCGG 1 cut(s) 874
Kzo9I GATC 4 cut(s) 16, 46, 232, 886
LmnI GCTCC 1 cut(s) 487
Lsp1109I GCAGC 4 cut(s) 67, 75, 452, 635
LweI GCATC 5 cut(s) 229, 331, 1112, 1185, 1219
MabI ACCWGGT 1 cut(s) 1068
MaeI CTAG 5 cut(s) 401, 471, 557, 1154, 1223
MaeII ACGT 2 cut(s) 312, 956
MaeIII GTNAC 5 cut(s) 174, 502, 548, 674, 1164
MalI GATC 4 cut(s) 18, 48, 234, 888
MbiI CCGCTC 1 cut(s) 192
MboI GATC 4 cut(s) 16, 46, 232, 886
MboII GAAGA 8 cut(s) 544, 593, 704, 711, 781, 1147, 1195, 1275
MhlI GDGCHC 3 cut(s) 229, 271, 853
MluCI AATT 3 cut(s) 81, 632, 994
MlyI GAGTC 2 cut(s) 267, 569
MmeI TCCRAC 2 cut(s) 180, 811
Mph1103I ATGCAT 1 cut(s) 33
MroNI GCCGGC 2 cut(s) 443, 731
MseI TTAA 2 cut(s) 459, 1079
MslI CAYNNNNRTG 1 cut(s) 234
MspA1I CMGCKG 1 cut(s) 873
MspI CCGG 8 cut(s) 98, 444, 518, 732, 961, 977, 1238, 1269
MspR9I CCNGG 5 cut(s) 610, 790, 978, 1070, 1270
MvaI CCWGG 3 cut(s) 610, 790, 1070
MvnI CGCG 2 cut(s) 685, 873
MwoI GCNNNNNNNGC 5 cut(s) 94, 440, 732, 1039, 1265
NaeI GCCGGC 2 cut(s) 445, 733
NciI CCSGG 2 cut(s) 978, 1270
NcoI CCATGG 2 cut(s) 137, 1338
NdeII GATC 4 cut(s) 16, 46, 232, 886
NgoMIV GCCGGC 2 cut(s) 443, 731
NlaIV GGNNCC 2 cut(s) 7, 835
NmuCI GTSAC 3 cut(s) 174, 502, 1164
NsiI ATGCAT 1 cut(s) 33
PagI TCATGA 2 cut(s) 229, 235
PceI AGGCCT 1 cut(s) 919
PcsI WCGNNNNNNNCGW 3 cut(s) 213, 936, 953
PdiI GCCGGC 2 cut(s) 445, 733
PfeI GAWTC 2 cut(s) 680, 1142
PflMI CCANNNNNTGG 2 cut(s) 377, 780
PkrI GCNGC 8 cut(s) 57, 90, 442, 516, 625, 650, 872, 1032
PleI GAGTC 2 cut(s) 267, 569
PpsI GAGTC 2 cut(s) 267, 569
Ppu21I YACGTR 1 cut(s) 313
PsiI TTATAA 1 cut(s) 597
Psp6I CCWGG 3 cut(s) 608, 788, 1068
PspGI CCWGG 3 cut(s) 608, 788, 1068
PspN4I GGNNCC 2 cut(s) 7, 835
PspPI GGNCC 2 cut(s) 711, 792
RsaI GTAC 7 cut(s) 315, 466, 497, 959, 1091, 1278, 1301
RsaNI GTAC 7 cut(s) 314, 465, 496, 958, 1090, 1277, 1300
RseI CAYNNNNRTG 1 cut(s) 234
SacII CCGCGG 1 cut(s) 874
SaqAI TTAA 2 cut(s) 459, 1079
SatI GCNGC 8 cut(s) 56, 89, 441, 515, 624, 649, 871, 1031
Sau3AI GATC 4 cut(s) 16, 46, 232, 886
Sau96I GGNCC 2 cut(s) 711, 792
ScaI AGTACT 2 cut(s) 466, 497
SchI GAGTC 2 cut(s) 267, 569
ScrFI CCNGG 5 cut(s) 610, 790, 978, 1070, 1270
SduI GDGCHC 3 cut(s) 229, 271, 853
SexAI ACCWGGT 1 cut(s) 1068
SfaNI GCATC 5 cut(s) 229, 331, 1112, 1185, 1219
Sfr303I CCGCGG 1 cut(s) 874
SgrBI CCGCGG 1 cut(s) 874
SinI GGWCC 1 cut(s) 792
SmiMI CAYNNNNRTG 1 cut(s) 234
SmlI CTYRAG 1 cut(s) 1287
SmoI CTYRAG 1 cut(s) 1287
SpeI ACTAGT 1 cut(s) 1222
Sse9I AATT 3 cut(s) 81, 632, 994
SseBI AGGCCT 1 cut(s) 919
SspMI CTAG 5 cut(s) 401, 471, 557, 1154, 1223
StuI AGGCCT 1 cut(s) 919
StyD4I CCNGG 5 cut(s) 608, 788, 976, 1068, 1268
StyI CCWWGG 3 cut(s) 137, 1153, 1338
TaaI ACNGT 2 cut(s) 386, 905
TaiI ACGT 2 cut(s) 315, 959
TaqI TCGA 1 cut(s) 939
TasI AATT 3 cut(s) 81, 632, 994
TatI WGTACW 4 cut(s) 464, 495, 1276, 1299
TauI GCSGC 4 cut(s) 517, 651, 873, 1033
TfiI GAWTC 2 cut(s) 680, 1142
Tru1I TTAA 2 cut(s) 459, 1079
Tru9I TTAA 2 cut(s) 459, 1079
TscAI CASTG 1 cut(s) 863
TseFI GTSAC 3 cut(s) 174, 502, 1164
TseI GCWGC 4 cut(s) 55, 88, 440, 623
Tsp45I GTSAC 3 cut(s) 174, 502, 1164
TspDTI ATGAA 5 cut(s) 51, 545, 608, 1097, 1343
TspGWI ACGGA 2 cut(s) 295, 962
TspRI CASTG 1 cut(s) 863
Van91I CCANNNNNTGG 2 cut(s) 377, 780
VpaK11BI GGWCC 1 cut(s) 792
XapI RAATTY 2 cut(s) 81, 994
XmaJI CCTAGG 1 cut(s) 1153
XspI CTAG 5 cut(s) 401, 471, 557, 1154, 1223
ZrmI AGTACT 2 cut(s) 466, 497
Zsp2I ATGCAT 1 cut(s) 33
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.