FvH4_7g09840

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0000113
Physical Location & Seq
Reverse (-)
9383312 .. 9385738
2427 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g09840.t4

Sequence Viewer

Length: 1134 bp
ATGGCCGAAGGACTCCGGCACCAAAACAAGCAACCCGTCATCTCCGGCGGCCGACCTCACATCGAATCCGACGATCTCCTTATCGACATTCTCTCAAGACTCCCAGTCAAAACCCTAGTTCGATTCCGCTGCGTCTGCAAGTCATGGCGGGCTTTGATCTCCGATTCTCACTTGGTCACGACCCACCTCCGCCGCTCTAACCGCCGCAGGCTGCTTTTCTCACTCGCGCCTTACCAATCTATTGACATCAGAGTGCTAAACGACGTCGTTTGCCACTACTTAATCAGTAAGCATTTCCGACCTGTTGTGCTACCTGTATATATTGGAGCTTTGAAAATTGTGGGTTCTTGCAATGGACTGGTTTGTTTATTGGGAAATTCGGAGTTGATTGTCGTGTGGAACCCTAGTACTAGACATGCCAGGTTGTTGACAGTGCCCAATGAGTTTCGTTTCGGTAGCATAAGGTTTTATGGGTTTGGTTATGATTCCACCATTGATGACTATAAGGTTGTAGTTGGCCACACAAGTATGAAAAATGGTACTCGTACAACCACAGTTGTGATTGTTCAGCTCAAAACCGAGTCTTGGAGGACTTTTGATTGCGTCGATTATGTTCATTTGCTTGGGCAAGGGTGCTTGGTGAATGGTGCTTTACATTGGGTTGAGATGGCATGGAAAGAGGTGTTGATGATTCAGCCTGTGCTTCATGCAAGGATCATGTCTTTTGATTTAGCAGAGGAGACATTTCGGGAGTTTATTCCGTTGTCATATCTTAGTCGGGATGAAAGGCTTATCTCTGCTCGGGTTGGAATTGCTGAAGATAGTCTCTTTGTATATTTGTTTACAGATAGTGGAATTACAATGTGGGTGATGAAAGAATATAGGGTTAATGGGACTTGGACGAAAGAGACGCAAATTCCTACAAAGACACCTCACCTTCCTCAAAAATTCTGTTACTGTAATCCTATATGCATTTTAGAGAATGGTGAAGTTTTGATAAATTCTGGTGACTTGATGCTGTATAATCCAAATGGAGGGGGAAATAGGAATGTTCTCGGCACTCCTGCGGATTTGGCCCCTGAACCAGTTATGTACCTGGAGAGTTTAGTTTCGCCATTTAAGGAAGATAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1

Protein Analysis

378

Amino Acids

42.86

Weight (kDa)

8.28

Isoelectric Point (pI)

41.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 24 - 58 2.6e-10 F-box domain
F-box-like PF12937 24 - 59 6.6e-09 F-box-like
FBA_3 PF08268 111 - 333 5e-20 F-box associated beta propeller domain
FBA_1 PF07734 113 - 328 1.1e-25 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000113)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G41473 AT3G16210
fragaria_vesca FvH4_1g00300 FvH4_1g03000 FvH4_1g03001 FvH4_2g08290 FvH4_2g08290 FvH4_3g33320 FvH4_3g33531 FvH4_3g40660 FvH4_3g41160 FvH4_4g09850 FvH4_4g09850 FvH4_4g09850 FvH4_6g33740 FvH4_6g33751 FvH4_6g39180 FvH4_6g39910 FvH4_6g39910 FvH4_6g39910 FvH4_6g39930 FvH4_6g39930 FvH4_6g40000 FvH4_6g40001 FvH4_6g40002 FvH4_6g40010 FvH4_6g40030 FvH4_6g40070 FvH4_6g40080 FvH4_6g40090 FvH4_6g47950 FvH4_6g47950 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g09840 FvH4_7g25410 FvH4_7g25772 FvH4_7g25790 FvH4_7g25790
malus_domestica MD00G1070000.v1.1 MD00G1070100.v1.1 MD02G1002000.v1.1 MD04G1162000.v1.1 MD09G1129200.v1.1 MD09G1144400.v1.1 MD09G1144500.v1.1 MD15G1145500.v1.1 MD17G1124300.v1.1
prunus_persica Prupe.1G567200_v2.0.a1 Prupe.3G191200_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.3G191300_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1 Prupe.7G269000_v2.0.a1
pyrus_communis pycom02g00080 pycom02g00090 pycom09g05450 pycom09g06390 pycom15g13040 pycom15g13060 pycom17g11570
rosa_chinensis RchiOBHm_Chr1g0328801 RchiOBHm_Chr1g0347091 RchiOBHm_Chr1g0347101 RchiOBHm_Chr1g0347131 RchiOBHm_Chr1g0347171 RchiOBHm_Chr1g0347211 RchiOBHm_Chr1g0347321 RchiOBHm_Chr1g0347341 RchiOBHm_Chr1g0347361 RchiOBHm_Chr2g0084671 RchiOBHm_Chr2g0153011 RchiOBHm_Chr2g0154441 RchiOBHm_Chr2g0154521 RchiOBHm_Chr2g0154531 RchiOBHm_Chr2g0154541 RchiOBHm_Chr2g0154551 RchiOBHm_Chr2g0154561 RchiOBHm_Chr2g0154571 RchiOBHm_Chr2g0154581 RchiOBHm_Chr2g0154591 RchiOBHm_Chr2g0154601 RchiOBHm_Chr2g0154611 RchiOBHm_Chr2g0154621 RchiOBHm_Chr2g0154641 RchiOBHm_Chr2g0154651 RchiOBHm_Chr2g0154661 RchiOBHm_Chr2g0154671 RchiOBHm_Chr2g0154681 RchiOBHm_Chr2g0154711 RchiOBHm_Chr2g0167131 RchiOBHm_Chr5g0060681 RchiOBHm_Chr5g0060691 RchiOBHm_Chr5g0060711 RchiOBHm_Chr5g0061011 RchiOBHm_Chr6g0275741
rosa_laevigata RLG00000013437 RLG00000015630 RLG00000020778 RLG00000020784 RLG00000020785 RLG00000020787 RLG00000020788 RLG00000020790 RLG00000020791 RLG00000020792 RLG00000020794 RLG00000020795 RLG00000020796 RLG00000020797 RLG00000021699 RLG00000028755 RLG00000035394
rosa_multiflora Rmu_co8119446.1_g000001 Rmu_co8175998.1_g000001 Rmu_co8210288.1_g000001 Rmu_co8317779.1_g000001 Rmu_co8324277.1_g000001 Rmu_co8343471.1_g000001 Rmu_co8346313.1_g000001 Rmu_co8407145.1_g000001 Rmu_co8411851.1_g000001 Rmu_co8437621.1_g000001 Rmu_sc0000218.1_g000006 Rmu_sc0000640.1_g000006 Rmu_sc0000864.1_g000001 Rmu_sc0000864.1_g000002 Rmu_sc0000864.1_g000004 Rmu_sc0000864.1_g000007 Rmu_sc0001004.1_g000008 Rmu_sc0001004.1_g000016 Rmu_sc0001004.1_g000017 Rmu_sc0001004.1_g000023 Rmu_sc0001004.1_g000026 Rmu_sc0001004.1_g000027 Rmu_sc0001004.1_g000033 Rmu_sc0001004.1_g000034 Rmu_sc0001004.1_g000035 Rmu_sc0001027.1_g000008 Rmu_sc0001027.1_g000011 Rmu_sc0001027.1_g000015 Rmu_sc0001027.1_g000019 Rmu_sc0001027.1_g000021 Rmu_sc0001027.1_g000022 Rmu_sc0001027.1_g000023 Rmu_sc0001027.1_g000026 Rmu_sc0001027.1_g000028 Rmu_sc0001027.1_g000029 Rmu_sc0002705.1_g000031 Rmu_sc0002705.1_g000033 Rmu_sc0002705.1_g000036 Rmu_sc0002705.1_g000037 Rmu_sc0003808.1_g000017 Rmu_sc0003808.1_g000018 Rmu_sc0004001.1_g000015 Rmu_sc0006475.1_g000019 Rmu_sc0008818.1_g000006 Rmu_sc0013419.1_g000015 Rmu_sc0015771.1_g000021 Rmu_sc0016102.1_g000001 Rmu_sc0016442.1_g000001 Rmu_sc0016843.1_g000001 Rmu_sc0016843.1_g000002 Rmu_sc0032116.1_g000001
rosa_roxburghii Rroxscaffold_1G00019640 Rroxscaffold_1G00020010 Rroxscaffold_1G00020070 Rroxscaffold_1G00020110 Rroxscaffold_2G00083690 Rroxscaffold_2G00094170 Rroxscaffold_2G00094180 Rroxscaffold_2G00094190 Rroxscaffold_2G00094200 Rroxscaffold_2G00094210 Rroxscaffold_2G00094220 Rroxscaffold_2G00094230 Rroxscaffold_2G00094240 Rroxscaffold_2G00094250 Rroxscaffold_2G00094260 Rroxscaffold_2G00094330 Rroxscaffold_2G00155920 Rroxscaffold_3G00250730 Rroxscaffold_4G00307870 Rroxscaffold_4G00307880 Rroxscaffold_4G00307900 Rroxscaffold_4G00307910 Rroxscaffold_4G00307970 Rroxscaffold_7G00192940
rosa_rugosa Rorug01G0185500 Rorug01G0185600 Rorug01G0185900 Rorug01G0186100 Rorug02G0085700 Rorug02G0444400 Rorug02G0444600 Rorug02G0444700 Rorug02G0444700 Rorug02G0444800 Rorug04G0120600 Rorug05G0332700 Rorug05G0332800 Rorug05G0332900 Rorug05G0333000 Rorug05G0336000 Rorug06G0095900
rosa_samantha Rh2AG003200 Rh2BG004100 Rh2BG606800 Rh2CG004200 Rh2DG003900 Rh2DG531100 Rh6BG210600 Rh6CG214300 Rh6DG203900
rosa_wichuraiana Rw1G007390 Rw1G017020 Rw1G017100 Rw2G000310 Rw2G041790 Rw2G041850 Rw2G041860 Rw2G041870 Rw2G041880 Rw2G041890 Rw2G041900 Rw2G041920 Rw2G041940 Rw2G049600 Rw4G015020 Rw5G037320 Rw5G037330 Rw5G037340 Rw6G018130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 267
AccB1I GGYRCC 1 cut(s) 18
AccBSI CCGCTC 1 cut(s) 195
AccII CGCG 1 cut(s) 227
AciI CCGC 8 cut(s) 48, 127, 148, 190, 193, 202, 205, 1067
AclWI GGATC 1 cut(s) 722
AcoI YGGCCR 3 cut(s) 3, 49, 517
AcsI RAATTY 4 cut(s) 376, 915, 947, 1000
AcuI CTGAAG 1 cut(s) 837
AcyI GRCGYC 1 cut(s) 264
AfaI GTAC 4 cut(s) 409, 541, 547, 1094
AfiI CCNNNNNNNGG 2 cut(s) 585, 1034
AgsI TTSAA 1 cut(s) 334
AhdI GACNNNNNGTC 1 cut(s) 104
AjnI CCWGG 2 cut(s) 419, 1095
AleI CACNNNNGTG 1 cut(s) 557
AluBI AGCT 2 cut(s) 329, 571
AluI AGCT 2 cut(s) 329, 571
Alw26I GTCTC 3 cut(s) 734, 830, 902
AlwI GGATC 1 cut(s) 722
Ama87I CYCGRG 1 cut(s) 801
AoxI GGCC 4 cut(s) 3, 49, 517, 1074
ApeKI GCWGC 2 cut(s) 129, 211
ApoI RAATTY 4 cut(s) 376, 915, 947, 1000
AspLEI GCGC 1 cut(s) 229
AspS9I GGNCC 1 cut(s) 1075
AsuHPI GGTGA 5 cut(s) 652, 880, 926, 998, 1019
AvaI CYCGRG 1 cut(s) 801
BaeGI GKGCMC 1 cut(s) 438
BalI TGGCCA 1 cut(s) 519
BanI GGYRCC 1 cut(s) 18
BbvI GCAGC 2 cut(s) 116, 198
BccI CCATC 1 cut(s) 661
BcgI CGANNNNNNTGC 2 cut(s) 111, 145
BciT130I CCWGG 2 cut(s) 421, 1097
BcoDI GTCTC 3 cut(s) 734, 830, 902
BfaI CTAG 3 cut(s) 116, 405, 411
BisI GCNGC 5 cut(s) 49, 130, 193, 205, 212
BlsI GCNGC 5 cut(s) 50, 131, 194, 206, 213
BmcAI AGTACT 1 cut(s) 409
Bme1390I CCNGG 2 cut(s) 421, 1097
BmeRI GACNNNNNGTC 1 cut(s) 104
BmeT110I CYCGRG 1 cut(s) 801
BmgT120I GGNCC 1 cut(s) 1075
BmiI GGNNCC 3 cut(s) 20, 401, 1077
BmrFI CCNGG 2 cut(s) 421, 1097
BmrI ACTGGG 1 cut(s) 98
BmsI GCATC 1 cut(s) 1005
BmuI ACTGGG 1 cut(s) 98
BpmI CTGGAG 1 cut(s) 1118
BpuEI CTTGAG 1 cut(s) 79
BsaHI GRCGYC 1 cut(s) 264
Bsc4I CCNNNNNNNGG 2 cut(s) 585, 1034
Bse1I ACTGG 3 cut(s) 104, 363, 1085
Bse3DI GCAATG 1 cut(s) 358
BseBI CCWGG 2 cut(s) 421, 1097
BseGI GGATG 1 cut(s) 787
BseLI CCNNNNNNNGG 2 cut(s) 585, 1034
BseMI GCAATG 1 cut(s) 358
BseNI ACTGG 3 cut(s) 104, 363, 1085
BseRI GAGGAG 1 cut(s) 752
BseSI GKGCMC 1 cut(s) 438
BseX3I CGGCCG 1 cut(s) 49
BseXI GCAGC 2 cut(s) 116, 198
Bsh1236I CGCG 1 cut(s) 227
Bsh1285I CGRYCG 1 cut(s) 52
BshFI GGCC 4 cut(s) 5, 51, 519, 1076
BshNI GGYRCC 1 cut(s) 18
BsiEI CGRYCG 1 cut(s) 52
BsiHKCI CYCGRG 1 cut(s) 801
BsiSI CCGG 2 cut(s) 16, 45
BslFI GGGAC 1 cut(s) 907
BslI CCNNNNNNNGG 2 cut(s) 585, 1034
BsmAI GTCTC 3 cut(s) 734, 830, 902
BsmBI CGTCTC 1 cut(s) 902
BsmFI GGGAC 1 cut(s) 907
BsnI GGCC 4 cut(s) 5, 51, 519, 1076
BsoBI CYCGRG 1 cut(s) 801
Bsp1286I GDGCHC 1 cut(s) 438
Bsp143I GATC 3 cut(s) 73, 156, 714
BspACI CCGC 8 cut(s) 48, 127, 148, 190, 193, 202, 205, 1067
BspANI GGCC 4 cut(s) 5, 51, 519, 1076
BspFNI CGCG 1 cut(s) 227
BspLI GGNNCC 3 cut(s) 20, 401, 1077
BspPI GGATC 1 cut(s) 722
BspT107I GGYRCC 1 cut(s) 18
BsrBI CCGCTC 1 cut(s) 195
BsrDI GCAATG 1 cut(s) 358
BsrI ACTGG 3 cut(s) 104, 363, 1085
BssMI GATC 3 cut(s) 73, 156, 714
BssNI GRCGYC 1 cut(s) 264
Bst2UI CCWGG 2 cut(s) 421, 1097
Bst4CI ACNGT 3 cut(s) 433, 556, 959
BstACI GRCGYC 1 cut(s) 264
BstC8I GCNNGC 2 cut(s) 150, 209
BstDEI CTNAG 1 cut(s) 773
BstF5I GGATG 1 cut(s) 787
BstFNI CGCG 1 cut(s) 227
BstHHI GCGC 1 cut(s) 229
BstKTI GATC 3 cut(s) 76, 159, 717
BstMAI GTCTC 3 cut(s) 734, 830, 902
BstMBI GATC 3 cut(s) 73, 156, 714
BstMCI CGRYCG 1 cut(s) 52
BstMWI GCNNNNNNNGC 3 cut(s) 135, 201, 1073
BstNI CCWGG 2 cut(s) 421, 1097
BstNSI RCATGY 1 cut(s) 419
BstSCI CCNGG 2 cut(s) 419, 1095
BstSLI GKGCMC 1 cut(s) 438
BstUI CGCG 1 cut(s) 227
BstV1I GCAGC 2 cut(s) 116, 198
BstZI CGGCCG 1 cut(s) 49
BsuRI GGCC 4 cut(s) 5, 51, 519, 1076
BtsCI GGATG 1 cut(s) 787
BtsIMutI CAGTG 1 cut(s) 438
Cac8I GCNNGC 2 cut(s) 150, 209
CfoI GCGC 1 cut(s) 229
Cfr13I GGNCC 1 cut(s) 1075
CseI GACGC 3 cut(s) 121, 592, 919
Csp6I GTAC 4 cut(s) 408, 540, 546, 1093
CviAII CATG 5 cut(s) 144, 416, 672, 707, 718
CviQI GTAC 4 cut(s) 408, 540, 546, 1093
DdeI CTNAG 1 cut(s) 773
DpnI GATC 3 cut(s) 75, 158, 716
DpnII GATC 3 cut(s) 73, 156, 714
DriI GACNNNNNGTC 1 cut(s) 104
EaeI YGGCCR 3 cut(s) 3, 49, 517
EagI CGGCCG 1 cut(s) 49
Eam1105I GACNNNNNGTC 1 cut(s) 104
EciI GGCGGA 1 cut(s) 179
EclXI CGGCCG 1 cut(s) 49
Eco52I CGGCCG 1 cut(s) 49
Eco57I CTGAAG 1 cut(s) 837
Eco88I CYCGRG 1 cut(s) 801
EcoRII CCWGG 2 cut(s) 419, 1095
EcoT22I ATGCAT 1 cut(s) 974
Esp3I CGTCTC 1 cut(s) 902
FaeI CATG 5 cut(s) 147, 419, 675, 710, 721
FaqI GGGAC 1 cut(s) 907
FatI CATG 5 cut(s) 143, 415, 671, 706, 717
FauI CCCGC 1 cut(s) 141
Fnu4HI GCNGC 5 cut(s) 49, 130, 193, 205, 212
FokI GGATG 1 cut(s) 794
Fsp4HI GCNGC 5 cut(s) 49, 130, 193, 205, 212
FspBI CTAG 3 cut(s) 116, 405, 411
GlaI GCGC 1 cut(s) 228
GluI GCNGC 5 cut(s) 49, 130, 193, 205, 212
GsuI CTGGAG 1 cut(s) 1118
HaeIII GGCC 4 cut(s) 5, 51, 519, 1076
HapII CCGG 2 cut(s) 16, 45
HgaI GACGC 3 cut(s) 121, 592, 919
HhaI GCGC 1 cut(s) 229
Hin1I GRCGYC 1 cut(s) 264
Hin1II CATG 5 cut(s) 147, 419, 675, 710, 721
Hin6I GCGC 1 cut(s) 227
HinP1I GCGC 1 cut(s) 227
HincII GTYRAC 1 cut(s) 429
HindII GTYRAC 1 cut(s) 429
HinfI GANTC 8 cut(s) 12, 65, 99, 123, 164, 485, 581, 691
HpaII CCGG 2 cut(s) 16, 45
HphI GGTGA 5 cut(s) 652, 880, 926, 998, 1019
Hpy166II GTNNAC 2 cut(s) 429, 843
Hpy188I TCNGA 5 cut(s) 70, 163, 251, 299, 382
Hpy188III TCNNGA 4 cut(s) 96, 178, 749, 779
Hpy8I GTNNAC 2 cut(s) 429, 843
Hpy99I CGWCG 4 cut(s) 74, 266, 269, 608
HpyAV CCTTC 1 cut(s) 947
HpyCH4III ACNGT 3 cut(s) 433, 556, 959
HpyCH4IV ACGT 1 cut(s) 264
HpyCH4V TGCA 4 cut(s) 138, 351, 710, 972
HpyF10VI GCNNNNNNNGC 3 cut(s) 135, 201, 1073
HpyF3I CTNAG 1 cut(s) 773
HpySE526I ACGT 1 cut(s) 264
Hsp92I GRCGYC 1 cut(s) 264
Hsp92II CATG 5 cut(s) 147, 419, 675, 710, 721
HspAI GCGC 1 cut(s) 227
Kzo9I GATC 3 cut(s) 73, 156, 714
LmnI GCTCC 1 cut(s) 326
Lsp1109I GCAGC 2 cut(s) 116, 198
LweI GCATC 1 cut(s) 1005
MaeI CTAG 3 cut(s) 116, 405, 411
MaeII ACGT 1 cut(s) 264
MaeIII GTNAC 3 cut(s) 175, 953, 1007
MalI GATC 3 cut(s) 75, 158, 716
MbiI CCGCTC 1 cut(s) 195
MboI GATC 3 cut(s) 73, 156, 714
MboII GAAGA 1 cut(s) 830
MhlI GDGCHC 1 cut(s) 438
MlsI TGGCCA 1 cut(s) 519
MluCI AATT 7 cut(s) 336, 376, 810, 855, 915, 947, 1000
MluNI TGGCCA 1 cut(s) 519
MlyI GAGTC 3 cut(s) 6, 93, 590
MmeI TCCRAC 3 cut(s) 93, 322, 787
MnlI CCTC 8 cut(s) 66, 197, 582, 673, 730, 942, 951, 1028
Mox20I TGGCCA 1 cut(s) 519
Mph1103I ATGCAT 1 cut(s) 974
MscI TGGCCA 1 cut(s) 519
MseI TTAA 3 cut(s) 281, 888, 1119
MslI CAYNNNNRTG 3 cut(s) 251, 527, 557
Msp20I TGGCCA 1 cut(s) 519
MspA1I CMGCKG 1 cut(s) 129
MspI CCGG 2 cut(s) 16, 45
MspR9I CCNGG 2 cut(s) 421, 1097
MvaI CCWGG 2 cut(s) 421, 1097
MvnI CGCG 1 cut(s) 227
MwoI GCNNNNNNNGC 3 cut(s) 135, 201, 1073
NdeII GATC 3 cut(s) 73, 156, 714
NlaIII CATG 5 cut(s) 147, 419, 675, 710, 721
NlaIV GGNNCC 3 cut(s) 20, 401, 1077
NmeAIII GCCGAG 1 cut(s) 1035
NmuCI GTSAC 2 cut(s) 175, 1007
NsiI ATGCAT 1 cut(s) 974
NspI RCATGY 1 cut(s) 419
OliI CACNNNNGTG 1 cut(s) 557
PcsI WCGNNNNNNNCGW 1 cut(s) 69
PfeI GAWTC 5 cut(s) 65, 123, 164, 485, 691
PkrI GCNGC 5 cut(s) 50, 131, 194, 206, 213
PleI GAGTC 3 cut(s) 6, 93, 589
PpsI GAGTC 3 cut(s) 6, 93, 589
Psp6I CCWGG 2 cut(s) 419, 1095
PspGI CCWGG 2 cut(s) 419, 1095
PspN4I GGNNCC 3 cut(s) 20, 401, 1077
PspPI GGNCC 1 cut(s) 1075
RsaI GTAC 4 cut(s) 409, 541, 547, 1094
RsaNI GTAC 4 cut(s) 408, 540, 546, 1093
RseI CAYNNNNRTG 3 cut(s) 251, 527, 557
SaqAI TTAA 3 cut(s) 281, 888, 1119
SatI GCNGC 5 cut(s) 49, 130, 193, 205, 212
Sau3AI GATC 3 cut(s) 73, 156, 714
Sau96I GGNCC 1 cut(s) 1075
ScaI AGTACT 1 cut(s) 409
SchI GAGTC 3 cut(s) 6, 93, 590
ScrFI CCNGG 2 cut(s) 421, 1097
SduI GDGCHC 1 cut(s) 438
SfaNI GCATC 1 cut(s) 1005
SmiMI CAYNNNNRTG 3 cut(s) 251, 527, 557
SmlI CTYRAG 1 cut(s) 94
SmoI CTYRAG 1 cut(s) 94
Sse9I AATT 7 cut(s) 336, 376, 810, 855, 915, 947, 1000
SsiI CCGC 8 cut(s) 48, 127, 148, 190, 193, 202, 205, 1067
SspMI CTAG 3 cut(s) 116, 405, 411
StyD4I CCNGG 2 cut(s) 419, 1095
TaaI ACNGT 3 cut(s) 433, 556, 959
TaiI ACGT 1 cut(s) 267
TaqI TCGA 4 cut(s) 63, 84, 121, 606
TasI AATT 7 cut(s) 336, 376, 810, 855, 915, 947, 1000
TatI WGTACW 1 cut(s) 407
TauI GCSGC 3 cut(s) 51, 195, 207
TfiI GAWTC 5 cut(s) 65, 123, 164, 485, 691
Tru1I TTAA 3 cut(s) 281, 888, 1119
Tru9I TTAA 3 cut(s) 281, 888, 1119
TscAI CASTG 1 cut(s) 438
TseFI GTSAC 2 cut(s) 175, 1007
TseI GCWGC 2 cut(s) 129, 211
Tsp45I GTSAC 2 cut(s) 175, 1007
TspDTI ATGAA 5 cut(s) 545, 605, 695, 798, 887
TspGWI ACGGA 1 cut(s) 750
TspRI CASTG 1 cut(s) 438
XapI RAATTY 4 cut(s) 376, 915, 947, 1000
XceI RCATGY 1 cut(s) 419
XspI CTAG 3 cut(s) 116, 405, 411
ZraI GACGTC 1 cut(s) 265
ZrmI AGTACT 1 cut(s) 409
Zsp2I ATGCAT 1 cut(s) 974
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.