Rmu_sc0002983.1_g000005

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002983.1
OG0000100
Physical Location & Seq
Reverse (-)
10033 .. 16079
6047 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002983.1_g000005.1.cds

Sequence Viewer

Length: 2520 bp
ctgaaggaggatagagaggaatcagaatcagaggaagaggagaatagatcagatgaagcaaagacagttccggaaggagaagaaaaaggagctgatgatcagaattgtgaaaacgaagaagataacctagaagttgaggtggctgaacaggaaacagcttcagaaaaaaacaaatgggagaaagagcttcagaaaaaggaggaggagataacatatatgactgcaaagaaagataatttgaagaaaaagctgaacaaaaaggaacaggaactaagcagaattgaaatagctttagaaaaatacaaatgggagaaagagcttcagaaaaaggaggaggagataagatatatgactgcagagaaagataatttgaagaaaaagctgaatgaaaaggaagaggaactaaggaaaatcacagaggacatggtgaatctggaggaaagaaatgctacacttgtgaccgggaatttctgccttgcatcgtcgcacagctccccacctactaacccaacagaaggaaaaaatgaattaaatgaagctgcatctaaggctgctgaaaacacaaaagagaaagatcaatcgactgttgaggaaggtcagtcccatgggatctgcacagtcgaagaatctgcagaagcagcagcatctcaatctccacctcactgcacagtggcagaagaaactaaatcgacacctccatcacacaaggagtcacagtttcagagccccacagtccacatgctcacagtggcagaaatggaacaacaagctgacaagtgtcagatagtgaaaagtcctatagttgaagaagcatttcaacttcgtacgttgagcatagagaaagagaagaagacaccagagcagagccaaaagggagagttaacaatgcaccttacagagcaacattccggtgaaacggtatcatcaataggtctttactcttacgttgtgagattaaagaataggacaagaacacagaaaaaggacaacatttactggtggggagatgtgaaagcaaaaagacagaagaaagcaaaggagattgaagagaaattgaaagatgctgaaaagagagaaaaagaaaaggagatgaaggcctcactgccagatgctgaacgtaaaaacctagaacagatggtagcacaacagaaattggacgatttaccagaggatgttctggaagcaataagagagatggacgctgcagaaaatgcacaaatcaataaagagccagaagagaaacagatacctgctgaggtcgtaaactgggaggagagcaaagtatacaattttatggaccaggacaccaagaggaaagtccagaaatactggcaaaatgcaccatcaggagtatacttctgggatggaagacggtatggagcacaggtttcaagacaggatttaaaagacataatcatggatgaaccgatagcaagcaattgcatcgaatgttatggaattctcttgactgatcagttgttggagaaagaatcacaaggcttggatgtcccaacttttatgaatccgttatgctggataaaacggaataaagtaaatgagagaaaaaggcgaaagcagaaaactgaagatgaagaagaatcaagtgaagatgaggaagaaacaactaaagttgaagaagaatctaatgaagaacaagtccggggtaagaagacgaagaaggataagaagaagagaagaagaaacagggaagaaactgaagatgaagaagaagaatctgatggagaaaaagttcctgccaagaagaagaagaaaatggataaaaggaaggcaaaaaaagagagtacaaagaaaaaggaagaaactgacgaggaagaagatacaaaggatgatgtagaggaaaaagtcccaggaaaaaggaaaagatatgtaaaagagggttatgtgcaatatcgctgcacaatgattgcttttctgaaaacaattgcagaaaacaaaaataatctgactgaagggactttagagctgctgcataaaactccctttgcaacgctgatagatgcattccatggaggttcaattaaagaaaaggatgcaaagaaattagatgatttaatcacacttctgctacaagcatacaacagcgacacagacctttttgtgtttggaaacaggaaattcagaatgtcaacaagtgatatatctatgatttttggagtgccgggatccgggttatcagtaccaaagaccaaagaaggggcatacaaatatgatcatcagggggaggtgcagacatcagggggagatgtctacatgttcgtctcgaatcgtgaaggaaacctccgccgcccaccttcaagatctcaactccaggagtccagaaccggcgaccccacccccagaaccggccggaaaaccaccgaaccggccaccggaagtatcgaaagtccctctgcccggttcgatgttttcctcccagccaactgctaccaaacttcaccagcagctgtagcccgaccccagatcaccggagacgaaaattcatcaccggaaccggcctaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1985 PMD

Protein Analysis

839

Amino Acids

96.36

Weight (kDa)

5.19

Isoelectric Point (pI)

66.41

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000100)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr6g0248691
rosa_multiflora Rmu_co8124940.1_g000001 Rmu_co8378695.1_g000001 Rmu_sc0000023.1_g000005 Rmu_sc0000149.1_g000044 Rmu_sc0000195.1_g000019 Rmu_sc0000270.1_g000002 Rmu_sc0000270.1_g000003 Rmu_sc0000433.1_g000016 Rmu_sc0000493.1_g000067 Rmu_sc0000493.1_g000069 Rmu_sc0000493.1_g000070 Rmu_sc0000493.1_g000071 Rmu_sc0000532.1_g000015 Rmu_sc0000532.1_g000017 Rmu_sc0000552.1_g000004 Rmu_sc0000692.1_g000012 Rmu_sc0000733.1_g000017 Rmu_sc0000738.1_g000026 Rmu_sc0000738.1_g000027 Rmu_sc0000738.1_g000028 Rmu_sc0000738.1_g000030 Rmu_sc0000806.1_g000006 Rmu_sc0000863.1_g000026 Rmu_sc0000863.1_g000027 Rmu_sc0000863.1_g000028 Rmu_sc0000863.1_g000029 Rmu_sc0000863.1_g000030 Rmu_sc0000885.1_g000001 Rmu_sc0001168.1_g000020 Rmu_sc0001168.1_g000021 Rmu_sc0001214.1_g000031 Rmu_sc0001214.1_g000032 Rmu_sc0001239.1_g000003 Rmu_sc0001355.1_g000003 Rmu_sc0001373.1_g000008 Rmu_sc0001373.1_g000009 Rmu_sc0001373.1_g000010 Rmu_sc0001587.1_g000003 Rmu_sc0001648.1_g000020 Rmu_sc0001648.1_g000021 Rmu_sc0001648.1_g000022 Rmu_sc0001648.1_g000023 Rmu_sc0001836.1_g000052 Rmu_sc0001836.1_g000053 Rmu_sc0001913.1_g000025 Rmu_sc0001913.1_g000030 Rmu_sc0001938.1_g000005 Rmu_sc0001938.1_g000007 Rmu_sc0001977.1_g000016 Rmu_sc0001977.1_g000017 Rmu_sc0001977.1_g000018 Rmu_sc0001977.1_g000019 Rmu_sc0002080.1_g000031 Rmu_sc0002095.1_g000011 Rmu_sc0002095.1_g000012 Rmu_sc0002202.1_g000002 Rmu_sc0002202.1_g000004 Rmu_sc0002765.1_g000012 Rmu_sc0002955.1_g000003 Rmu_sc0002983.1_g000001 Rmu_sc0002983.1_g000002 Rmu_sc0002983.1_g000005 Rmu_sc0002983.1_g000006 Rmu_sc0003832.1_g000010 Rmu_sc0003880.1_g000041 Rmu_sc0003880.1_g000043 Rmu_sc0003981.1_g000011 Rmu_sc0003981.1_g000016 Rmu_sc0004118.1_g000013 Rmu_sc0004125.1_g000008 Rmu_sc0004155.1_g000007 Rmu_sc0004155.1_g000008 Rmu_sc0004155.1_g000009 Rmu_sc0004465.1_g000004 Rmu_sc0004465.1_g000005 Rmu_sc0004755.1_g000030 Rmu_sc0005014.1_g000009 Rmu_sc0005023.1_g000027 Rmu_sc0005446.1_g000019 Rmu_sc0006273.1_g000001 Rmu_sc0006948.1_g000020 Rmu_sc0007412.1_g000005 Rmu_sc0007996.1_g000001 Rmu_sc0009749.1_g000002 Rmu_sc0011497.1_g000008 Rmu_sc0011497.1_g000009 Rmu_sc0011497.1_g000010 Rmu_sc0012018.1_g000001 Rmu_sc0012347.1_g000004 Rmu_sc0012347.1_g000005 Rmu_sc0013290.1_g000001 Rmu_sc0013576.1_g000009 Rmu_sc0013576.1_g000011 Rmu_sc0014354.1_g000001 Rmu_sc0014482.1_g000006 Rmu_sc0016848.1_g000001 Rmu_sc0018723.1_g000002 Rmu_sc0018723.1_g000003 Rmu_sc0020085.1_g000001 Rmu_sc0022367.1_g000001 Rmu_sc0023661.1_g000001 Rmu_sc0030814.1_g000001 Rmu_sc0034982.1_g000001 Rmu_sc0036901.1_g000001 Rmu_ssc0000064.1_g000016 Rmu_ssc0000170.1_g000012 Rmu_ssc0000170.1_g000014 Rmu_ssc0000189.1_g000048 Rmu_ssc0000443.1_g000005
rosa_roxburghii Rroxscaffold_159G00432950 Rroxscaffold_1G00015760 Rroxscaffold_1G00015770 Rroxscaffold_1G00015780 Rroxscaffold_1G00015950 Rroxscaffold_1G00015980 Rroxscaffold_1G00018050 Rroxscaffold_1G00018060 Rroxscaffold_1G00020330 Rroxscaffold_1G00020340 Rroxscaffold_1G00020350 Rroxscaffold_1G00020370 Rroxscaffold_1G00021720 Rroxscaffold_1G00034800 Rroxscaffold_1G00036050 Rroxscaffold_1G00036060 Rroxscaffold_1G00036070 Rroxscaffold_1G00036160 Rroxscaffold_1G00036170 Rroxscaffold_1G00043200 Rroxscaffold_1G00043210 Rroxscaffold_1G00047700 Rroxscaffold_1G00055120 Rroxscaffold_1G00056300 Rroxscaffold_1G00056320 Rroxscaffold_1G00064030 Rroxscaffold_1G00064050 Rroxscaffold_1G00064110 Rroxscaffold_1G00064130 Rroxscaffold_1G00064140 Rroxscaffold_1G00069580 Rroxscaffold_1G00069590 Rroxscaffold_1G00069600 Rroxscaffold_2G00086000 Rroxscaffold_2G00095520 Rroxscaffold_2G00095530 Rroxscaffold_2G00102950 Rroxscaffold_2G00102960 Rroxscaffold_2G00102980 Rroxscaffold_2G00111430 Rroxscaffold_2G00111440 Rroxscaffold_2G00123850 Rroxscaffold_2G00123860 Rroxscaffold_2G00123870 Rroxscaffold_2G00127600 Rroxscaffold_2G00128430 Rroxscaffold_2G00128440 Rroxscaffold_2G00134550 Rroxscaffold_2G00134560 Rroxscaffold_2G00134570 Rroxscaffold_2G00150440 Rroxscaffold_2G00150450 Rroxscaffold_3G00221670 Rroxscaffold_3G00231550 Rroxscaffold_3G00231560 Rroxscaffold_3G00231580 Rroxscaffold_3G00231590 Rroxscaffold_3G00238200 Rroxscaffold_3G00238210 Rroxscaffold_3G00259430 Rroxscaffold_3G00271580 Rroxscaffold_3G00271590 Rroxscaffold_4G00277030 Rroxscaffold_4G00277050 Rroxscaffold_4G00277060 Rroxscaffold_4G00277070 Rroxscaffold_4G00293250 Rroxscaffold_4G00293260 Rroxscaffold_4G00300140 Rroxscaffold_4G00308740 Rroxscaffold_4G00309540 Rroxscaffold_4G00319500 Rroxscaffold_4G00325410 Rroxscaffold_4G00328420 Rroxscaffold_4G00329630 Rroxscaffold_5G00339100 Rroxscaffold_5G00339110 Rroxscaffold_5G00339130 Rroxscaffold_5G00349460 Rroxscaffold_5G00349470 Rroxscaffold_5G00349480 Rroxscaffold_5G00349490 Rroxscaffold_5G00349800 Rroxscaffold_5G00354000 Rroxscaffold_5G00357420 Rroxscaffold_5G00357430 Rroxscaffold_5G00366730 Rroxscaffold_5G00366740 Rroxscaffold_5G00366750 Rroxscaffold_5G00371380 Rroxscaffold_5G00371390 Rroxscaffold_5G00371410 Rroxscaffold_6G00390390 Rroxscaffold_6G00390400 Rroxscaffold_6G00390410 Rroxscaffold_6G00391800 Rroxscaffold_6G00391810 Rroxscaffold_6G00399200 Rroxscaffold_6G00403500 Rroxscaffold_6G00403510 Rroxscaffold_6G00403520 Rroxscaffold_6G00407230 Rroxscaffold_6G00411100 Rroxscaffold_6G00411700 Rroxscaffold_6G00415300 Rroxscaffold_6G00415310 Rroxscaffold_6G00422180 Rroxscaffold_6G00422200 Rroxscaffold_6G00422210 Rroxscaffold_7G00157710 Rroxscaffold_7G00157720 Rroxscaffold_7G00157740 Rroxscaffold_7G00194140 Rroxscaffold_7G00196750 Rroxscaffold_7G00197960 Rroxscaffold_7G00208750 Rroxscaffold_7G00208760 Rroxscaffold_7G00208780 Rroxscaffold_7G00213740 Rroxscaffold_7G00215180 Rroxscaffold_7G00215190 Rroxscaffold_7G00215200
rosa_rugosa Rorug03G0270600 Rorug05G0169200
rosa_samantha Rh1AG048500 Rh1AG091500 Rh1AG190900 Rh2BG351700 Rh2BG494300 Rh2BG539800 Rh3BG209100 Rh4CG136600 Rh4CG194800 Rh4CG381100 Rh5BG080500 Rh5BG083000 Rh5BG083100 Rh5BG124000 Rh5BG126200 Rh5BG131000 Rh5BG158900 Rh5BG284300 Rh5BG310800 Rh5BG437700 Rh6AG114700 Rh6AG126300 Rh6AG202500 Rh7CG009000 Rh7CG320700 Rh7CG355200 Rh7CG514200
rosa_wichuraiana Rw5G018600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1258
AccI GTMKAC 3 cut(s) 1284, 1353, 2268
AccIII TCCGGA 1 cut(s) 70
AciI CCGC 2 cut(s) 2302, 2305
AclWI GGATC 3 cut(s) 617, 2178, 2191
AcoI YGGCCR 2 cut(s) 2365, 2385
AcsI RAATTY 4 cut(s) 466, 1458, 2135, 2497
AcuI CTGAAG 7 cut(s) 23, 144, 173, 305, 1605, 1737, 1989
AfaI GTAC 3 cut(s) 826, 1804, 2199
AfiI CCNNNNNNNGG 6 cut(s) 515, 2186, 2214, 2363, 2390, 2415
AflIII ACRYGT 1 cut(s) 2271
AjnI CCWGG 3 cut(s) 1299, 1867, 2328
AloI GAACNNNNNNTCC 2 cut(s) 1734, 1766
Alw21I GWGCWC 1 cut(s) 1384
Alw26I GTCTC 2 cut(s) 2284, 2484
AlwI GGATC 3 cut(s) 617, 2178, 2191
AlwNI CAGNNNCTG 2 cut(s) 1112, 2465
Aor13HI TCCGGA 1 cut(s) 70
AoxI GGCC 4 cut(s) 1095, 2365, 2385, 2514
ApeKI GCWGC 9 cut(s) 539, 551, 638, 641, 1202, 1914, 1984, 1987, 2462
ApoI RAATTY 4 cut(s) 466, 1458, 2135, 2497
Asp700I GAANNNNTTC 2 cut(s) 813, 1749
AspS9I GGNCC 1 cut(s) 1297
AsuC2I CCSGG 5 cut(s) 463, 1661, 2181, 2188, 2416
AsuHPI GGTGA 5 cut(s) 439, 923, 2448, 2476, 2496
AvaII GGWCC 1 cut(s) 1297
BamHI GGATCC 1 cut(s) 2183
BanII GRGCYC 1 cut(s) 728
BbsI GAAGAC 3 cut(s) 857, 1375, 1676
Bbv12I GWGCWC 1 cut(s) 1384
BbvCI CCTCAGC 1 cut(s) 1254
BbvI GCAGC 9 cut(s) 526, 538, 650, 653, 1189, 1901, 1971, 1974, 2474
BccI CCATC 6 cut(s) 706, 1129, 1189, 1351, 1358, 1733
BcgI CGANNNNNNTGC 4 cut(s) 611, 645, 1426, 1460
BciT130I CCWGG 3 cut(s) 1301, 1869, 2330
BclI TGATCA 3 cut(s) 97, 1471, 2230
BcnI CCSGG 5 cut(s) 463, 1661, 2181, 2188, 2416
BcoDI GTCTC 2 cut(s) 2284, 2484
BfaI CTAG 2 cut(s) 128, 1127
BfmI CTRYAG 5 cut(s) 354, 630, 798, 1203, 2466
BfuAI ACCTGC 1 cut(s) 1258
BglII AGATCT 1 cut(s) 2318
Bme1390I CCNGG 8 cut(s) 463, 1301, 1661, 1869, 2181, 2188, 2330, 2416
Bme18I GGWCC 1 cut(s) 1297
BmgT120I GGNCC 1 cut(s) 1297
BmiI GGNNCC 2 cut(s) 2185, 2511
BmrFI CCNGG 8 cut(s) 463, 1301, 1661, 1869, 2181, 2188, 2330, 2416
BmrI ACTGGG 1 cut(s) 1276
BmsI GCATC 8 cut(s) 488, 551, 653, 1051, 1099, 1452, 2008, 2041
BmuI ACTGGG 1 cut(s) 1276
BoxI GACNNNNGTC 1 cut(s) 777
BpiI GAAGAC 3 cut(s) 857, 1375, 1676
BpmI CTGGAG 2 cut(s) 455, 2312
Bpu10I CCTNAGC 1 cut(s) 1254
BpuMI CCSGG 5 cut(s) 463, 1661, 2181, 2188, 2416
BsaJI CCNNGG 4 cut(s) 604, 1660, 1867, 2026
BsaWI WCCGGW 5 cut(s) 70, 908, 2390, 2486, 2506
BsaXI ACNNNNNCTCC 6 cut(s) 701, 731, 1371, 1401, 1734, 1764
Bsc4I CCNNNNNNNGG 6 cut(s) 515, 2186, 2214, 2363, 2390, 2415
Bse118I RCCGGY 4 cut(s) 2342, 2363, 2383, 2512
Bse1I ACTGG 3 cut(s) 1001, 1271, 1334
BseAI TCCGGA 1 cut(s) 70
BseBI CCWGG 3 cut(s) 1301, 1869, 2330
BseDI CCNNGG 4 cut(s) 604, 1660, 1867, 2026
BseGI GGATG 6 cut(s) 1177, 1369, 1426, 1510, 1852, 2056
BseLI CCNNNNNNNGG 6 cut(s) 515, 2186, 2214, 2363, 2390, 2415
BseMII CTCAG 1 cut(s) 1245
BseNI ACTGG 3 cut(s) 1001, 1271, 1334
BseRI GAGGAG 6 cut(s) 53, 215, 218, 347, 350, 1286
BseX3I CGGCCG 1 cut(s) 2365
BseXI GCAGC 9 cut(s) 526, 538, 650, 653, 1189, 1901, 1971, 1974, 2474
BseYI CCCAGC 1 cut(s) 2434
BsgI GTGCAG 4 cut(s) 598, 649, 1900, 2267
Bsh1285I CGRYCG 1 cut(s) 2368
BshFI GGCC 4 cut(s) 1097, 2367, 2387, 2516
BsiEI CGRYCG 1 cut(s) 2368
BsiHKAI GWGCWC 1 cut(s) 1384
BsiWI CGTACG 1 cut(s) 824
BslFI GGGAC 5 cut(s) 586, 1493, 1850, 1987, 2391
BslI CCNNNNNNNGG 6 cut(s) 515, 2186, 2214, 2363, 2390, 2415
BsmAI GTCTC 2 cut(s) 2284, 2484
BsmBI CGTCTC 2 cut(s) 2284, 2484
BsmFI GGGAC 5 cut(s) 586, 1493, 1850, 1987, 2391
BsmI GAATGC 1 cut(s) 2021
BsnI GGCC 4 cut(s) 1097, 2367, 2387, 2516
Bsp1286I GDGCHC 2 cut(s) 728, 1384
Bsp13I TCCGGA 1 cut(s) 70
Bsp143I GATC 9 cut(s) 47, 97, 574, 609, 1471, 2183, 2230, 2318, 2481
Bsp19I CCATGG 2 cut(s) 604, 2026
BspACI CCGC 2 cut(s) 2302, 2305
BspANI GGCC 4 cut(s) 1097, 2367, 2387, 2516
BspCNI CTCAG 1 cut(s) 1246
BspEI TCCGGA 1 cut(s) 70
BspLI GGNNCC 2 cut(s) 2185, 2511
BspMAI CTGCAG 3 cut(s) 358, 634, 1207
BspMI ACCTGC 1 cut(s) 1258
BspPI GGATC 3 cut(s) 617, 2178, 2191
BsrFI RCCGGY 4 cut(s) 2342, 2363, 2383, 2512
BsrI ACTGG 3 cut(s) 1001, 1271, 1334
BssAI RCCGGY 4 cut(s) 2342, 2363, 2383, 2512
BssECI CCNNGG 4 cut(s) 604, 1660, 1867, 2026
BssMI GATC 9 cut(s) 47, 97, 574, 609, 1471, 2183, 2230, 2318, 2481
BssNAI GTATAC 2 cut(s) 1285, 1354
BssT1I CCWWGG 2 cut(s) 604, 2026
Bst1107I GTATAC 2 cut(s) 1285, 1354
Bst2UI CCWGG 3 cut(s) 1301, 1869, 2330
Bst4CI ACNGT 9 cut(s) 67, 586, 619, 670, 717, 733, 748, 919, 1374
Bst6I CTCTTC 5 cut(s) 30, 390, 1041, 1230, 1685
BstAPI GCANNNNNTGC 1 cut(s) 1211
BstC8I GCNNGC 1 cut(s) 1435
BstDEI CTNAG 4 cut(s) 272, 404, 546, 1254
BstDSI CCRYGG 2 cut(s) 604, 2026
BstF5I GGATG 6 cut(s) 1177, 1369, 1426, 1510, 1852, 2056
BstKTI GATC 9 cut(s) 50, 100, 577, 612, 1474, 2186, 2233, 2321, 2484
BstMAI GTCTC 2 cut(s) 2284, 2484
BstMBI GATC 9 cut(s) 47, 97, 574, 609, 1471, 2183, 2230, 2318, 2481
BstMCI CGRYCG 1 cut(s) 2368
BstMWI GCNNNNNNNGC 4 cut(s) 548, 638, 1211, 2468
BstNI CCWGG 3 cut(s) 1301, 1869, 2330
BstNSI RCATGY 2 cut(s) 742, 2275
BstPAI GACNNNNGTC 1 cut(s) 777
BstSCI CCNGG 8 cut(s) 461, 1299, 1659, 1867, 2179, 2186, 2328, 2414
BstSFI CTRYAG 5 cut(s) 354, 630, 798, 1203, 2466
BstV1I GCAGC 9 cut(s) 526, 538, 650, 653, 1189, 1901, 1971, 1974, 2474
BstV2I GAAGAC 3 cut(s) 857, 1375, 1676
BstX2I RGATCY 3 cut(s) 609, 2183, 2318
BstYI RGATCY 3 cut(s) 609, 2183, 2318
BstZ17I GTATAC 2 cut(s) 1285, 1354
BstZI CGGCCG 1 cut(s) 2365
BsuRI GGCC 4 cut(s) 1097, 2367, 2387, 2516
BtgI CCRYGG 2 cut(s) 604, 2026
BtsCI GGATG 6 cut(s) 1177, 1369, 1426, 1510, 1852, 2056
BtsI GCAGTG 2 cut(s) 661, 1100
BtsIMutI CAGTG 4 cut(s) 661, 675, 753, 1100
BveI ACCTGC 1 cut(s) 1258
Cac8I GCNNGC 1 cut(s) 1435
CaiI CAGNNNCTG 2 cut(s) 1112, 2465
Cfr10I RCCGGY 4 cut(s) 2342, 2363, 2383, 2512
Cfr13I GGNCC 1 cut(s) 1297
CseI GACGC 1 cut(s) 1208
Csp6I GTAC 3 cut(s) 825, 1803, 2198
CviAII CATG 6 cut(s) 424, 605, 739, 1417, 2027, 2272
CviQI GTAC 3 cut(s) 825, 1803, 2198
DdeI CTNAG 4 cut(s) 272, 404, 546, 1254
DpnI GATC 9 cut(s) 49, 99, 576, 611, 1473, 2185, 2232, 2320, 2483
DpnII GATC 9 cut(s) 47, 97, 574, 609, 1471, 2183, 2230, 2318, 2481
DraI TTTAAA 1 cut(s) 1404
EaeI YGGCCR 2 cut(s) 2365, 2385
EagI CGGCCG 1 cut(s) 2365
Eam1104I CTCTTC 5 cut(s) 30, 390, 1041, 1230, 1685
EarI CTCTTC 5 cut(s) 30, 390, 1041, 1230, 1685
EciI GGCGGA 1 cut(s) 2291
EclXI CGGCCG 1 cut(s) 2365
Eco130I CCWWGG 2 cut(s) 604, 2026
Eco147I AGGCCT 1 cut(s) 1097
Eco24I GRGCYC 1 cut(s) 728
Eco47I GGWCC 1 cut(s) 1297
Eco52I CGGCCG 1 cut(s) 2365
Eco57I CTGAAG 7 cut(s) 23, 144, 173, 305, 1605, 1737, 1989
EcoRI GAATTC 1 cut(s) 1458
EcoRII CCWGG 3 cut(s) 1299, 1867, 2328
EcoT14I CCWWGG 2 cut(s) 604, 2026
EcoT22I ATGCAT 1 cut(s) 2023
EcoT38I GRGCYC 1 cut(s) 728
ErhI CCWWGG 2 cut(s) 604, 2026
Esp3I CGTCTC 2 cut(s) 2284, 2484
FaeI CATG 6 cut(s) 427, 608, 742, 1420, 2030, 2275
FaqI GGGAC 5 cut(s) 586, 1493, 1850, 1987, 2391
FatI CATG 6 cut(s) 423, 604, 738, 1416, 2026, 2271
FbaI TGATCA 3 cut(s) 97, 1471, 2230
FblI GTMKAC 3 cut(s) 1284, 1353, 2268
FokI GGATG 6 cut(s) 1184, 1376, 1433, 1517, 1859, 2063
FriOI GRGCYC 1 cut(s) 728
FspBI CTAG 2 cut(s) 128, 1127
GsaI CCCAGC 1 cut(s) 2438
GsuI CTGGAG 2 cut(s) 455, 2312
HaeIII GGCC 4 cut(s) 1097, 2367, 2387, 2516
HgaI GACGC 1 cut(s) 1208
Hin1II CATG 6 cut(s) 427, 608, 742, 1420, 2030, 2275
HincII GTYRAC 2 cut(s) 882, 2148
HindII GTYRAC 2 cut(s) 882, 2148
HpaI GTTAAC 1 cut(s) 882
HphI GGTGA 5 cut(s) 439, 923, 2448, 2476, 2496
Hpy166II GTNNAC 7 cut(s) 736, 882, 1264, 1285, 1354, 2148, 2269
Hpy8I GTNNAC 7 cut(s) 736, 882, 1264, 1285, 1354, 2148, 2269
Hpy99I CGWCG 1 cut(s) 487
HpyCH4III ACNGT 9 cut(s) 67, 586, 619, 670, 717, 733, 748, 919, 1374
HpyCH4IV ACGT 3 cut(s) 827, 945, 1117
HpyF10VI GCNNNNNNNGC 4 cut(s) 548, 638, 1211, 2468
HpyF3I CTNAG 4 cut(s) 272, 404, 546, 1254
HpySE526I ACGT 3 cut(s) 827, 945, 1117
Hsp92II CATG 6 cut(s) 427, 608, 742, 1420, 2030, 2275
Kpn2I TCCGGA 1 cut(s) 70
Ksp22I TGATCA 3 cut(s) 97, 1471, 2230
KspAI GTTAAC 1 cut(s) 882
Kzo9I GATC 9 cut(s) 47, 97, 574, 609, 1471, 2183, 2230, 2318, 2481
LmnI GCTCC 3 cut(s) 89, 497, 1379
Lsp1109I GCAGC 9 cut(s) 526, 538, 650, 653, 1189, 1901, 1971, 1974, 2474
LweI GCATC 8 cut(s) 488, 551, 653, 1051, 1099, 1452, 2008, 2041
MaeI CTAG 2 cut(s) 128, 1127
MaeII ACGT 3 cut(s) 827, 945, 1117
MaeIII GTNAC 2 cut(s) 457, 711
MalI GATC 9 cut(s) 49, 99, 576, 611, 1473, 2185, 2232, 2320, 2483
MboI GATC 9 cut(s) 47, 97, 574, 609, 1471, 2183, 2230, 2318, 2481
MfeI CAATTG 2 cut(s) 1438, 1941
MflI RGATCY 3 cut(s) 609, 2183, 2318
MhlI GDGCHC 2 cut(s) 728, 1384
MlyI GAGTC 2 cut(s) 719, 2342
MmeI TCCRAC 1 cut(s) 1461
Mph1103I ATGCAT 1 cut(s) 2023
MroI TCCGGA 1 cut(s) 70
MroXI GAANNNNTTC 2 cut(s) 813, 1749
MseI TTAA 6 cut(s) 530, 881, 956, 1403, 2040, 2072
MslI CAYNNNNRTG 2 cut(s) 909, 1415
MspA1I CMGCKG 1 cut(s) 2465
MspR9I CCNGG 8 cut(s) 463, 1301, 1661, 1869, 2181, 2188, 2330, 2416
MunI CAATTG 2 cut(s) 1438, 1941
Mva1269I GAATGC 1 cut(s) 2021
MvaI CCWGG 3 cut(s) 1301, 1869, 2330
MwoI GCNNNNNNNGC 4 cut(s) 548, 638, 1211, 2468
NciI CCSGG 5 cut(s) 463, 1661, 2181, 2188, 2416
NcoI CCATGG 2 cut(s) 604, 2026
NdeII GATC 9 cut(s) 47, 97, 574, 609, 1471, 2183, 2230, 2318, 2481
NlaIII CATG 6 cut(s) 427, 608, 742, 1420, 2030, 2275
NlaIV GGNNCC 2 cut(s) 2185, 2511
NmuCI GTSAC 2 cut(s) 457, 711
NsiI ATGCAT 1 cut(s) 2023
NspI RCATGY 2 cut(s) 742, 2275
PceI AGGCCT 1 cut(s) 1097
PciI ACATGT 1 cut(s) 2271
PctI GAATGC 1 cut(s) 2021
PdmI GAANNNNTTC 2 cut(s) 813, 1749
Pfl23II CGTACG 1 cut(s) 824
PfoI TCCNGGA 1 cut(s) 2328
PleI GAGTC 2 cut(s) 718, 2341
PpsI GAGTC 2 cut(s) 718, 2341
PscI ACATGT 1 cut(s) 2271
PshAI GACNNNNGTC 1 cut(s) 777
Psp6I CCWGG 3 cut(s) 1299, 1867, 2328
PspFI CCCAGC 1 cut(s) 2434
PspGI CCWGG 3 cut(s) 1299, 1867, 2328
PspLI CGTACG 1 cut(s) 824
PspN4I GGNNCC 2 cut(s) 2185, 2511
PspPI GGNCC 1 cut(s) 1297
PstI CTGCAG 3 cut(s) 358, 634, 1207
PstNI CAGNNNCTG 2 cut(s) 1112, 2465
PsuI RGATCY 3 cut(s) 609, 2183, 2318
PvuII CAGCTG 1 cut(s) 2465
RsaI GTAC 3 cut(s) 826, 1804, 2199
RsaNI GTAC 3 cut(s) 825, 1803, 2198
RseI CAYNNNNRTG 2 cut(s) 909, 1415
SaqAI TTAA 6 cut(s) 530, 881, 956, 1403, 2040, 2072
Sau3AI GATC 9 cut(s) 47, 97, 574, 609, 1471, 2183, 2230, 2318, 2481
Sau96I GGNCC 1 cut(s) 1297
SchI GAGTC 2 cut(s) 719, 2342
ScrFI CCNGG 8 cut(s) 463, 1301, 1661, 1869, 2181, 2188, 2330, 2416
SduI GDGCHC 2 cut(s) 728, 1384
SfaNI GCATC 8 cut(s) 488, 551, 653, 1051, 1099, 1452, 2008, 2041
SfcI CTRYAG 5 cut(s) 354, 630, 798, 1203, 2466
SinI GGWCC 1 cut(s) 1297
SmiMI CAYNNNNRTG 2 cut(s) 909, 1415
SseBI AGGCCT 1 cut(s) 1097
SsiI CCGC 2 cut(s) 2302, 2305
SspMI CTAG 2 cut(s) 128, 1127
StuI AGGCCT 1 cut(s) 1097
StyD4I CCNGG 8 cut(s) 461, 1299, 1659, 1867, 2179, 2186, 2328, 2414
StyI CCWWGG 2 cut(s) 604, 2026
TaaI ACNGT 9 cut(s) 67, 586, 619, 670, 717, 733, 748, 919, 1374
TaiI ACGT 3 cut(s) 830, 948, 1120
TaqI TCGA 7 cut(s) 581, 621, 689, 1446, 2282, 2400, 2421
TatI WGTACW 1 cut(s) 1802
TauI GCSGC 1 cut(s) 2307
Tru1I TTAA 6 cut(s) 530, 881, 956, 1403, 2040, 2072
Tru9I TTAA 6 cut(s) 530, 881, 956, 1403, 2040, 2072
TscAI CASTG 4 cut(s) 668, 675, 753, 1107
TseFI GTSAC 2 cut(s) 457, 711
TseI GCWGC 9 cut(s) 539, 551, 638, 641, 1202, 1914, 1984, 1987, 2462
Tsp45I GTSAC 2 cut(s) 457, 711
TspGWI ACGGA 2 cut(s) 1515, 1558
TspRI CASTG 4 cut(s) 668, 675, 753, 1107
VpaK11BI GGWCC 1 cut(s) 1297
XapI RAATTY 4 cut(s) 466, 1458, 2135, 2497
XceI RCATGY 2 cut(s) 742, 2275
XmiI GTMKAC 3 cut(s) 1284, 1353, 2268
XmnI GAANNNNTTC 2 cut(s) 813, 1749
XspI CTAG 2 cut(s) 128, 1127
Zsp2I ATGCAT 1 cut(s) 2023
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.