Rroxscaffold_1G00064110

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000100
Physical Location & Seq
Forward (+)
85953885 .. 85958721
4837 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00064110.1

Sequence Viewer

Length: 714 bp
ATGCCGATTTGGTTCGGGTCCCCAAACCATAGTGCCACCATCTATCCGACTGCAGCCCTATCGGAGCCATTCTTGATCCGAATTTTGAACTCCAAGACTACATCGGAGTCCCTAGATCCCAAGCCTTCCGGTCACCGCGACCACCAATCTTGGGAGCTGATCCGAAAACAATTCCAAAACCTAGTGCGAAGCCGTCCGGGTAGAAGAGAGAACCATCGCCTCAAGACGGGTCAAGGACCTCGACTTCTTGGAGAAAAATGGAAAAAAGGAAGAGGCGGCAAGGGCCGTGCTAGACAACTGCGACACCAAGGGAGGCTCCGAAAATTTACTTCATCGGAGATGGAGGAAGGTGCAGAATTTCCTACCCATGGGAGGCATTCTCTCGAAACCCTAAGGTTTGCACGTGTGAATTGCACAGCTTTAAAATATGGAGCCAAGTGTACATTGAGATATCATGCATTTGTGCTGTCACGACTTCAACGTGTGAAAATGGAAGATACCCTTATCTCAGGACTCACGGTTCCGAGCCCCACAGTCCACATGCCCACGGTGGAGGAAATGGAACAACAAGTCGACATGTTTCGGATAGTGAAAAGTCCTATAGTTGAAGAAGCATTTCCACTTCGTACATTGAGCATAGAGAAAGAGAAGAAGACACCGGAGCGAGCAAAAAGAGCGAGTTCACAATGCACCTTACACGGCAACATTCGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

237

Amino Acids

27.19

Weight (kDa)

10.51

Isoelectric Point (pI)

58.91

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000100)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr6g0248691
rosa_multiflora Rmu_co8124940.1_g000001 Rmu_co8378695.1_g000001 Rmu_sc0000023.1_g000005 Rmu_sc0000149.1_g000044 Rmu_sc0000195.1_g000019 Rmu_sc0000270.1_g000002 Rmu_sc0000270.1_g000003 Rmu_sc0000433.1_g000016 Rmu_sc0000493.1_g000067 Rmu_sc0000493.1_g000069 Rmu_sc0000493.1_g000070 Rmu_sc0000493.1_g000071 Rmu_sc0000532.1_g000015 Rmu_sc0000532.1_g000017 Rmu_sc0000552.1_g000004 Rmu_sc0000692.1_g000012 Rmu_sc0000733.1_g000017 Rmu_sc0000738.1_g000026 Rmu_sc0000738.1_g000027 Rmu_sc0000738.1_g000028 Rmu_sc0000738.1_g000030 Rmu_sc0000806.1_g000006 Rmu_sc0000863.1_g000026 Rmu_sc0000863.1_g000027 Rmu_sc0000863.1_g000028 Rmu_sc0000863.1_g000029 Rmu_sc0000863.1_g000030 Rmu_sc0000885.1_g000001 Rmu_sc0001168.1_g000020 Rmu_sc0001168.1_g000021 Rmu_sc0001214.1_g000031 Rmu_sc0001214.1_g000032 Rmu_sc0001239.1_g000003 Rmu_sc0001355.1_g000003 Rmu_sc0001373.1_g000008 Rmu_sc0001373.1_g000009 Rmu_sc0001373.1_g000010 Rmu_sc0001587.1_g000003 Rmu_sc0001648.1_g000020 Rmu_sc0001648.1_g000021 Rmu_sc0001648.1_g000022 Rmu_sc0001648.1_g000023 Rmu_sc0001836.1_g000052 Rmu_sc0001836.1_g000053 Rmu_sc0001913.1_g000025 Rmu_sc0001913.1_g000030 Rmu_sc0001938.1_g000005 Rmu_sc0001938.1_g000007 Rmu_sc0001977.1_g000016 Rmu_sc0001977.1_g000017 Rmu_sc0001977.1_g000018 Rmu_sc0001977.1_g000019 Rmu_sc0002080.1_g000031 Rmu_sc0002095.1_g000011 Rmu_sc0002095.1_g000012 Rmu_sc0002202.1_g000002 Rmu_sc0002202.1_g000004 Rmu_sc0002765.1_g000012 Rmu_sc0002955.1_g000003 Rmu_sc0002983.1_g000001 Rmu_sc0002983.1_g000002 Rmu_sc0002983.1_g000005 Rmu_sc0002983.1_g000006 Rmu_sc0003832.1_g000010 Rmu_sc0003880.1_g000041 Rmu_sc0003880.1_g000043 Rmu_sc0003981.1_g000011 Rmu_sc0003981.1_g000016 Rmu_sc0004118.1_g000013 Rmu_sc0004125.1_g000008 Rmu_sc0004155.1_g000007 Rmu_sc0004155.1_g000008 Rmu_sc0004155.1_g000009 Rmu_sc0004465.1_g000004 Rmu_sc0004465.1_g000005 Rmu_sc0004755.1_g000030 Rmu_sc0005014.1_g000009 Rmu_sc0005023.1_g000027 Rmu_sc0005446.1_g000019 Rmu_sc0006273.1_g000001 Rmu_sc0006948.1_g000020 Rmu_sc0007412.1_g000005 Rmu_sc0007996.1_g000001 Rmu_sc0009749.1_g000002 Rmu_sc0011497.1_g000008 Rmu_sc0011497.1_g000009 Rmu_sc0011497.1_g000010 Rmu_sc0012018.1_g000001 Rmu_sc0012347.1_g000004 Rmu_sc0012347.1_g000005 Rmu_sc0013290.1_g000001 Rmu_sc0013576.1_g000009 Rmu_sc0013576.1_g000011 Rmu_sc0014354.1_g000001 Rmu_sc0014482.1_g000006 Rmu_sc0016848.1_g000001 Rmu_sc0018723.1_g000002 Rmu_sc0018723.1_g000003 Rmu_sc0020085.1_g000001 Rmu_sc0022367.1_g000001 Rmu_sc0023661.1_g000001 Rmu_sc0030814.1_g000001 Rmu_sc0034982.1_g000001 Rmu_sc0036901.1_g000001 Rmu_ssc0000064.1_g000016 Rmu_ssc0000170.1_g000012 Rmu_ssc0000170.1_g000014 Rmu_ssc0000189.1_g000048 Rmu_ssc0000443.1_g000005
rosa_roxburghii Rroxscaffold_159G00432950 Rroxscaffold_1G00015760 Rroxscaffold_1G00015770 Rroxscaffold_1G00015780 Rroxscaffold_1G00015950 Rroxscaffold_1G00015980 Rroxscaffold_1G00018050 Rroxscaffold_1G00018060 Rroxscaffold_1G00020330 Rroxscaffold_1G00020340 Rroxscaffold_1G00020350 Rroxscaffold_1G00020370 Rroxscaffold_1G00021720 Rroxscaffold_1G00034800 Rroxscaffold_1G00036050 Rroxscaffold_1G00036060 Rroxscaffold_1G00036070 Rroxscaffold_1G00036160 Rroxscaffold_1G00036170 Rroxscaffold_1G00043200 Rroxscaffold_1G00043210 Rroxscaffold_1G00047700 Rroxscaffold_1G00055120 Rroxscaffold_1G00056300 Rroxscaffold_1G00056320 Rroxscaffold_1G00064030 Rroxscaffold_1G00064050 Rroxscaffold_1G00064110 Rroxscaffold_1G00064130 Rroxscaffold_1G00064140 Rroxscaffold_1G00069580 Rroxscaffold_1G00069590 Rroxscaffold_1G00069600 Rroxscaffold_2G00086000 Rroxscaffold_2G00095520 Rroxscaffold_2G00095530 Rroxscaffold_2G00102950 Rroxscaffold_2G00102960 Rroxscaffold_2G00102980 Rroxscaffold_2G00111430 Rroxscaffold_2G00111440 Rroxscaffold_2G00123850 Rroxscaffold_2G00123860 Rroxscaffold_2G00123870 Rroxscaffold_2G00127600 Rroxscaffold_2G00128430 Rroxscaffold_2G00128440 Rroxscaffold_2G00134550 Rroxscaffold_2G00134560 Rroxscaffold_2G00134570 Rroxscaffold_2G00150440 Rroxscaffold_2G00150450 Rroxscaffold_3G00221670 Rroxscaffold_3G00231550 Rroxscaffold_3G00231560 Rroxscaffold_3G00231580 Rroxscaffold_3G00231590 Rroxscaffold_3G00238200 Rroxscaffold_3G00238210 Rroxscaffold_3G00259430 Rroxscaffold_3G00271580 Rroxscaffold_3G00271590 Rroxscaffold_4G00277030 Rroxscaffold_4G00277050 Rroxscaffold_4G00277060 Rroxscaffold_4G00277070 Rroxscaffold_4G00293250 Rroxscaffold_4G00293260 Rroxscaffold_4G00300140 Rroxscaffold_4G00308740 Rroxscaffold_4G00309540 Rroxscaffold_4G00319500 Rroxscaffold_4G00325410 Rroxscaffold_4G00328420 Rroxscaffold_4G00329630 Rroxscaffold_5G00339100 Rroxscaffold_5G00339110 Rroxscaffold_5G00339130 Rroxscaffold_5G00349460 Rroxscaffold_5G00349470 Rroxscaffold_5G00349480 Rroxscaffold_5G00349490 Rroxscaffold_5G00349800 Rroxscaffold_5G00354000 Rroxscaffold_5G00357420 Rroxscaffold_5G00357430 Rroxscaffold_5G00366730 Rroxscaffold_5G00366740 Rroxscaffold_5G00366750 Rroxscaffold_5G00371380 Rroxscaffold_5G00371390 Rroxscaffold_5G00371410 Rroxscaffold_6G00390390 Rroxscaffold_6G00390400 Rroxscaffold_6G00390410 Rroxscaffold_6G00391800 Rroxscaffold_6G00391810 Rroxscaffold_6G00399200 Rroxscaffold_6G00403500 Rroxscaffold_6G00403510 Rroxscaffold_6G00403520 Rroxscaffold_6G00407230 Rroxscaffold_6G00411100 Rroxscaffold_6G00411700 Rroxscaffold_6G00415300 Rroxscaffold_6G00415310 Rroxscaffold_6G00422180 Rroxscaffold_6G00422200 Rroxscaffold_6G00422210 Rroxscaffold_7G00157710 Rroxscaffold_7G00157720 Rroxscaffold_7G00157740 Rroxscaffold_7G00194140 Rroxscaffold_7G00196750 Rroxscaffold_7G00197960 Rroxscaffold_7G00208750 Rroxscaffold_7G00208760 Rroxscaffold_7G00208780 Rroxscaffold_7G00213740 Rroxscaffold_7G00215180 Rroxscaffold_7G00215190 Rroxscaffold_7G00215200
rosa_rugosa Rorug03G0270600 Rorug05G0169200
rosa_samantha Rh1AG048500 Rh1AG091500 Rh1AG190900 Rh2BG351700 Rh2BG494300 Rh2BG539800 Rh3BG209100 Rh4CG136600 Rh4CG194800 Rh4CG381100 Rh5BG080500 Rh5BG083000 Rh5BG083100 Rh5BG124000 Rh5BG126200 Rh5BG131000 Rh5BG158900 Rh5BG284300 Rh5BG310800 Rh5BG437700 Rh6AG114700 Rh6AG126300 Rh6AG202500 Rh7CG009000 Rh7CG320700 Rh7CG355200 Rh7CG514200
rosa_wichuraiana Rw5G018600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 573
AccII CGCG 1 cut(s) 138
AciI CCGC 2 cut(s) 136, 276
AclWI GGATC 3 cut(s) 70, 110, 154
AcsI RAATTY 3 cut(s) 81, 323, 356
AcvI CACGTG 1 cut(s) 404
AfaI GTAC 2 cut(s) 442, 628
AfiI CCNNNNNNNGG 4 cut(s) 151, 226, 368, 372
AflIII ACRYGT 3 cut(s) 403, 481, 576
AgsI TTSAA 3 cut(s) 88, 479, 608
AloI GAACNNNNNNTCC 2 cut(s) 504, 536
AluBI AGCT 2 cut(s) 157, 419
AluI AGCT 2 cut(s) 157, 419
AlwI GGATC 3 cut(s) 70, 110, 154
AoxI GGCC 1 cut(s) 283
ApeKI GCWGC 1 cut(s) 53
ApoI RAATTY 3 cut(s) 81, 323, 356
Asp700I GAANNNNTTC 1 cut(s) 615
AspS9I GGNCC 3 cut(s) 18, 236, 283
AsuC2I CCSGG 1 cut(s) 198
AsuHPI GGTGA 1 cut(s) 125
AvaII GGWCC 2 cut(s) 18, 236
AxyI CCTNAGG 1 cut(s) 392
BanII GRGCYC 1 cut(s) 530
BbrPI CACGTG 1 cut(s) 404
BbsI GAAGAC 1 cut(s) 659
BbvI GCAGC 1 cut(s) 65
BccI CCATC 3 cut(s) 47, 222, 334
BceAI ACGGC 2 cut(s) 177, 270
BcgI CGANNNNNNTGC 2 cut(s) 42, 76
BcnI CCSGG 1 cut(s) 198
BfaI CTAG 3 cut(s) 113, 182, 291
BfmI CTRYAG 2 cut(s) 51, 600
BisI GCNGC 2 cut(s) 54, 277
BlsI GCNGC 2 cut(s) 55, 278
Bme1390I CCNGG 1 cut(s) 198
Bme18I GGWCC 2 cut(s) 18, 236
BmgT120I GGNCC 3 cut(s) 18, 236, 283
BmiI GGNNCC 6 cut(s) 19, 20, 66, 317, 433, 522
BmrFI CCNGG 1 cut(s) 198
BpiI GAAGAC 1 cut(s) 659
BplI GAGNNNNNCTC 2 cut(s) 364, 396
BpuEI CTTGAG 1 cut(s) 206
BpuMI CCSGG 1 cut(s) 198
BsaAI YACGTR 1 cut(s) 404
BsaJI CCNNGG 3 cut(s) 307, 367, 546
BsaWI WCCGGW 2 cut(s) 128, 658
Bsc4I CCNNNNNNNGG 4 cut(s) 151, 226, 368, 372
Bse21I CCTNAGG 1 cut(s) 392
BseDI CCNNGG 3 cut(s) 307, 367, 546
BseLI CCNNNNNNNGG 4 cut(s) 151, 226, 368, 372
BseMII CTCAG 1 cut(s) 522
BseXI GCAGC 1 cut(s) 65
BsgI GTGCAG 1 cut(s) 372
Bsh1236I CGCG 1 cut(s) 138
BshFI GGCC 1 cut(s) 285
BsiSI CCGG 3 cut(s) 129, 197, 659
BslFI GGGAC 2 cut(s) 4, 94
BslI CCNNNNNNNGG 4 cut(s) 151, 226, 368, 372
BsmFI GGGAC 2 cut(s) 4, 94
BsmI GAATGC 1 cut(s) 376
BsnI GGCC 1 cut(s) 285
Bsp1286I GDGCHC 1 cut(s) 530
Bsp1407I TGTACA 1 cut(s) 440
Bsp143I GATC 3 cut(s) 75, 115, 159
Bsp19I CCATGG 1 cut(s) 367
BspACI CCGC 2 cut(s) 136, 276
BspANI GGCC 1 cut(s) 285
BspCNI CTCAG 1 cut(s) 521
BspFNI CGCG 1 cut(s) 138
BspLI GGNNCC 6 cut(s) 19, 20, 66, 317, 433, 522
BspMAI CTGCAG 1 cut(s) 55
BspPI GGATC 3 cut(s) 70, 110, 154
BsrGI TGTACA 1 cut(s) 440
BssECI CCNNGG 3 cut(s) 307, 367, 546
BssMI GATC 3 cut(s) 75, 115, 159
BssT1I CCWWGG 2 cut(s) 307, 367
Bst4CI ACNGT 3 cut(s) 520, 535, 550
Bst6I CTCTTC 2 cut(s) 199, 265
BstAUI TGTACA 1 cut(s) 440
BstBAI YACGTR 1 cut(s) 404
BstC8I GCNNGC 1 cut(s) 666
BstDEI CTNAG 2 cut(s) 392, 508
BstDSI CCRYGG 2 cut(s) 367, 546
BstEII GGTNACC 1 cut(s) 131
BstFNI CGCG 1 cut(s) 138
BstKTI GATC 3 cut(s) 78, 118, 162
BstMBI GATC 3 cut(s) 75, 115, 159
BstMWI GCNNNNNNNGC 2 cut(s) 282, 674
BstNSI RCATGY 2 cut(s) 544, 580
BstPI GGTNACC 1 cut(s) 131
BstSCI CCNGG 1 cut(s) 196
BstSFI CTRYAG 2 cut(s) 51, 600
BstUI CGCG 1 cut(s) 138
BstV1I GCAGC 1 cut(s) 65
BstV2I GAAGAC 1 cut(s) 659
BstX2I RGATCY 1 cut(s) 115
BstYI RGATCY 1 cut(s) 115
Bsu36I CCTNAGG 1 cut(s) 392
BsuRI GGCC 1 cut(s) 285
BtgI CCRYGG 2 cut(s) 367, 546
BtgZI GCGATG 1 cut(s) 200
Cac8I GCNNGC 1 cut(s) 666
Cfr13I GGNCC 3 cut(s) 18, 236, 283
Csp6I GTAC 2 cut(s) 441, 627
CspCI CAANNNNNGTGG 2 cut(s) 131, 166
CviAII CATG 4 cut(s) 368, 455, 541, 577
CviQI GTAC 2 cut(s) 441, 627
DdeI CTNAG 2 cut(s) 392, 508
DpnI GATC 3 cut(s) 77, 117, 161
DpnII GATC 3 cut(s) 75, 115, 159
DraI TTTAAA 1 cut(s) 423
Eam1104I CTCTTC 2 cut(s) 199, 265
EarI CTCTTC 2 cut(s) 199, 265
Eco130I CCWWGG 2 cut(s) 307, 367
Eco24I GRGCYC 1 cut(s) 530
Eco32I GATATC 1 cut(s) 452
Eco47I GGWCC 2 cut(s) 18, 236
Eco72I CACGTG 1 cut(s) 404
Eco81I CCTNAGG 1 cut(s) 392
Eco91I GGTNACC 1 cut(s) 131
EcoO109I RGGNCCY 2 cut(s) 18, 236
EcoO65I GGTNACC 1 cut(s) 131
EcoRV GATATC 1 cut(s) 452
EcoT14I CCWWGG 2 cut(s) 307, 367
EcoT22I ATGCAT 1 cut(s) 460
EcoT38I GRGCYC 1 cut(s) 530
ErhI CCWWGG 2 cut(s) 307, 367
FaeI CATG 4 cut(s) 371, 458, 544, 580
FaiI YATR 8 cut(s) 30, 369, 429, 456, 542, 578, 602, 638
FalI AAGNNNNNCTT 2 cut(s) 486, 518
FaqI GGGAC 2 cut(s) 4, 94
FatI CATG 4 cut(s) 367, 454, 540, 576
FblI GTMKAC 1 cut(s) 573
Fnu4HI GCNGC 2 cut(s) 54, 277
FriOI GRGCYC 1 cut(s) 530
Fsp4HI GCNGC 2 cut(s) 54, 277
FspBI CTAG 3 cut(s) 113, 182, 291
GluI GCNGC 2 cut(s) 54, 277
HaeIII GGCC 1 cut(s) 285
HapII CCGG 3 cut(s) 129, 197, 659
Hin1II CATG 4 cut(s) 371, 458, 544, 580
HincII GTYRAC 1 cut(s) 574
HindII GTYRAC 1 cut(s) 574
HinfI GANTC 2 cut(s) 107, 513
HpaII CCGG 3 cut(s) 129, 197, 659
HphI GGTGA 1 cut(s) 125
Hpy166II GTNNAC 4 cut(s) 441, 538, 574, 683
Hpy188I TCNGA 9 cut(s) 48, 64, 80, 106, 164, 320, 337, 525, 585
Hpy188III TCNNGA 5 cut(s) 73, 223, 383, 471, 510
Hpy8I GTNNAC 4 cut(s) 441, 538, 574, 683
HpyAV CCTTC 2 cut(s) 135, 341
HpyCH4III ACNGT 3 cut(s) 520, 535, 550
HpyCH4IV ACGT 2 cut(s) 403, 481
HpyCH4V TGCA 6 cut(s) 53, 353, 401, 414, 458, 690
HpyF10VI GCNNNNNNNGC 2 cut(s) 282, 674
HpyF3I CTNAG 2 cut(s) 392, 508
HpySE526I ACGT 2 cut(s) 403, 481
Hsp92II CATG 4 cut(s) 371, 458, 544, 580
KflI GGGWCCC 1 cut(s) 18
Kzo9I GATC 3 cut(s) 75, 115, 159
LmnI GCTCC 5 cut(s) 64, 154, 321, 431, 661
LpnPI CCDG 4 cut(s) 142, 210, 495, 672
Lsp1109I GCAGC 1 cut(s) 65
MaeI CTAG 3 cut(s) 113, 182, 291
MaeII ACGT 2 cut(s) 403, 481
MaeIII GTNAC 2 cut(s) 131, 468
MalI GATC 3 cut(s) 77, 117, 161
MboI GATC 3 cut(s) 75, 115, 159
MboII GAAGA 6 cut(s) 216, 282, 506, 620, 661, 664
MflI RGATCY 1 cut(s) 115
MhlI GDGCHC 1 cut(s) 530
MluCI AATT 5 cut(s) 81, 170, 323, 356, 409
MlyI GAGTC 2 cut(s) 116, 507
MmeI TCCRAC 1 cut(s) 71
MnlI CCTC 7 cut(s) 230, 249, 266, 306, 337, 366, 547
Mph1103I ATGCAT 1 cut(s) 460
MroXI GAANNNNTTC 1 cut(s) 615
MseI TTAA 1 cut(s) 422
MspI CCGG 3 cut(s) 129, 197, 659
MspR9I CCNGG 1 cut(s) 198
Mva1269I GAATGC 1 cut(s) 376
MvnI CGCG 1 cut(s) 138
MwoI GCNNNNNNNGC 2 cut(s) 282, 674
NciI CCSGG 1 cut(s) 198
NcoI CCATGG 1 cut(s) 367
NdeII GATC 3 cut(s) 75, 115, 159
NlaIII CATG 4 cut(s) 371, 458, 544, 580
NlaIV GGNNCC 6 cut(s) 19, 20, 66, 317, 433, 522
NmuCI GTSAC 2 cut(s) 131, 468
NsiI ATGCAT 1 cut(s) 460
NspI RCATGY 2 cut(s) 544, 580
PciI ACATGT 1 cut(s) 576
PcsI WCGNNNNNNNCGW 1 cut(s) 478
PctI GAATGC 1 cut(s) 376
PdmI GAANNNNTTC 1 cut(s) 615
PkrI GCNGC 2 cut(s) 55, 278
PleI GAGTC 2 cut(s) 115, 507
PmaCI CACGTG 1 cut(s) 404
PmlI CACGTG 1 cut(s) 404
PpsI GAGTC 2 cut(s) 115, 507
Ppu21I YACGTR 1 cut(s) 404
PpuMI RGGWCCY 2 cut(s) 18, 236
PscI ACATGT 1 cut(s) 576
Psp5II RGGWCCY 2 cut(s) 18, 236
PspCI CACGTG 1 cut(s) 404
PspEI GGTNACC 1 cut(s) 131
PspN4I GGNNCC 6 cut(s) 19, 20, 66, 317, 433, 522
PspPI GGNCC 3 cut(s) 18, 236, 283
PspPPI RGGWCCY 2 cut(s) 18, 236
PstI CTGCAG 1 cut(s) 55
PsuI RGATCY 1 cut(s) 115
RsaI GTAC 2 cut(s) 442, 628
RsaNI GTAC 2 cut(s) 441, 627
SalI GTCGAC 1 cut(s) 572
SaqAI TTAA 1 cut(s) 422
SatI GCNGC 2 cut(s) 54, 277
Sau3AI GATC 3 cut(s) 75, 115, 159
Sau96I GGNCC 3 cut(s) 18, 236, 283
SchI GAGTC 2 cut(s) 116, 507
ScrFI CCNGG 1 cut(s) 198
SduI GDGCHC 1 cut(s) 530
SetI ASST 9 cut(s) 159, 183, 241, 352, 398, 406, 421, 484, 695
SfcI CTRYAG 2 cut(s) 51, 600
SinI GGWCC 2 cut(s) 18, 236
SmlI CTYRAG 1 cut(s) 221
SmoI CTYRAG 1 cut(s) 221
Sse9I AATT 5 cut(s) 81, 170, 323, 356, 409
SsiI CCGC 2 cut(s) 136, 276
SspMI CTAG 3 cut(s) 113, 182, 291
StyD4I CCNGG 1 cut(s) 196
StyI CCWWGG 2 cut(s) 307, 367
TaaI ACNGT 3 cut(s) 520, 535, 550
TaiI ACGT 2 cut(s) 406, 484
TaqI TCGA 3 cut(s) 241, 384, 573
TasI AATT 5 cut(s) 81, 170, 323, 356, 409
TatI WGTACW 1 cut(s) 440
TauI GCSGC 1 cut(s) 279
Tru1I TTAA 1 cut(s) 422
Tru9I TTAA 1 cut(s) 422
TseFI GTSAC 2 cut(s) 131, 468
TseI GCWGC 1 cut(s) 53
Tsp45I GTSAC 2 cut(s) 131, 468
TspDTI ATGAA 1 cut(s) 321
VpaK11BI GGWCC 2 cut(s) 18, 236
XapI RAATTY 3 cut(s) 81, 323, 356
XceI RCATGY 2 cut(s) 544, 580
XmiI GTMKAC 1 cut(s) 573
XmnI GAANNNNTTC 1 cut(s) 615
XspI CTAG 3 cut(s) 113, 182, 291
Zsp2I ATGCAT 1 cut(s) 460
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.