Rh6AG202500

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
OG0000100
Physical Location & Seq
Forward (+)
36292265 .. 36300269
8005 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG202500.1

Sequence Viewer

Length: 1380 bp
ATGGAGACAGAGATAGGAAAGACCGATGAAGAGAAGAATGAATTACAAACAAAGCTTGAGGGAAAGGAAGAAGAGATAAGTGCTTTGAAAAAAGAAGTTGAGGAGAAAGAAAAGCAAATTGGCAGAATAAACGAAGAGAAGGAGGATATGTTACTGGAAAATGAGGTGTTGCAAATTGAGAAAGCCTCACTGATTAAAAGAGTGAAGCAATTGGAGGGCATAGTAATGGCACTAACTGAGAAGTATGAGTCGCCAATAGCACGTCCAGGTGATGACAACGACTCAACTCCACCTCCCCCACCACCTAGTTTCCCTCCACCAAAATCAAAGGCCCCTCAGGACAAGCCAACTGACAGCAAGCACTCCAAAAACACAAAATCTGAAAGTGGAATTCAGGGAACTCAATCACAACCTAGCGACTCCACGGCAAGCGGATCTGCAGAACCTCACTCTACCGACAGAGGACATCAGTCACCACTTGAATGCCTTGCCCAAGTAGCTGCACAAGTTGATTCACCAACCTCCCCTGATGTTAAATTGAGAATGACACAAGATGCTTGCACACCAAATACTGCTTGGGTTAATGCATTGTTTGTGTTTCCACCTCCGAGCGCTTTTCAAACTCCACCTCCAAGAAAAGTCCAGTTGGAAGATATGGAAGCAGAGCCACACAAGTATCAGATCATTGTATCACCAGAAGTTCAGCCTGTTTTTGACGTTGAACCAATCAATTACTGTCCTCATACGCAACAGATGACAAGAGCTGAGTTCACCAAGCCAATATTAGATGACATATCAGGGCAGGACTCAGAATCTATTGGCCTCTATTGTTATGTGATTACTACGAACAAAGAGTGCACATTTTCTTTGCTGTCTTTCATTAGTTTCTCTAGACAAAGAAATATGGTTGACGAGGATTGGCTGGCTGTTATGAAGGAGAAGAAGTGGCTTAAGATTCTTCAAGGTTATAATGCTCCCAAGGGATCTATTCTCTTGCAATCTGCAATAGAGGCAGAAGCCTATTTGAAAATTACAAACCTTCCCGTTGTTGATGAAGCATTCTATGGAGGTGAACTAGGCTCTTTCTCATCAGAATTGAGGCAACTTGGAGTTGAAATTGATACAGTGCAAGAGCACAAGTTAATTGCAGCGAATGTGACTTTGACTGCAAATCTGTCTTCCTTGACCAGTGATTGTGGTTTGTTGATTCTTAAATGCATCAAATGTTTGGGATCTGAAGCTTCTAATTTGATTAAGAGGATTACATTGCCTGCAATTGATGAAATGTATTACAGGAATGAAATTAGGCATTTCACTGAAGAATTGAAAGCAGTGGGTGTGGTTGATAATGCCACAGCAACTGAGATGATTGCTGCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

459

Amino Acids

50.91

Weight (kDa)

4.83

Isoelectric Point (pI)

58.85

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000100)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr6g0248691
rosa_multiflora Rmu_co8124940.1_g000001 Rmu_co8378695.1_g000001 Rmu_sc0000023.1_g000005 Rmu_sc0000149.1_g000044 Rmu_sc0000195.1_g000019 Rmu_sc0000270.1_g000002 Rmu_sc0000270.1_g000003 Rmu_sc0000433.1_g000016 Rmu_sc0000493.1_g000067 Rmu_sc0000493.1_g000069 Rmu_sc0000493.1_g000070 Rmu_sc0000493.1_g000071 Rmu_sc0000532.1_g000015 Rmu_sc0000532.1_g000017 Rmu_sc0000552.1_g000004 Rmu_sc0000692.1_g000012 Rmu_sc0000733.1_g000017 Rmu_sc0000738.1_g000026 Rmu_sc0000738.1_g000027 Rmu_sc0000738.1_g000028 Rmu_sc0000738.1_g000030 Rmu_sc0000806.1_g000006 Rmu_sc0000863.1_g000026 Rmu_sc0000863.1_g000027 Rmu_sc0000863.1_g000028 Rmu_sc0000863.1_g000029 Rmu_sc0000863.1_g000030 Rmu_sc0000885.1_g000001 Rmu_sc0001168.1_g000020 Rmu_sc0001168.1_g000021 Rmu_sc0001214.1_g000031 Rmu_sc0001214.1_g000032 Rmu_sc0001239.1_g000003 Rmu_sc0001355.1_g000003 Rmu_sc0001373.1_g000008 Rmu_sc0001373.1_g000009 Rmu_sc0001373.1_g000010 Rmu_sc0001587.1_g000003 Rmu_sc0001648.1_g000020 Rmu_sc0001648.1_g000021 Rmu_sc0001648.1_g000022 Rmu_sc0001648.1_g000023 Rmu_sc0001836.1_g000052 Rmu_sc0001836.1_g000053 Rmu_sc0001913.1_g000025 Rmu_sc0001913.1_g000030 Rmu_sc0001938.1_g000005 Rmu_sc0001938.1_g000007 Rmu_sc0001977.1_g000016 Rmu_sc0001977.1_g000017 Rmu_sc0001977.1_g000018 Rmu_sc0001977.1_g000019 Rmu_sc0002080.1_g000031 Rmu_sc0002095.1_g000011 Rmu_sc0002095.1_g000012 Rmu_sc0002202.1_g000002 Rmu_sc0002202.1_g000004 Rmu_sc0002765.1_g000012 Rmu_sc0002955.1_g000003 Rmu_sc0002983.1_g000001 Rmu_sc0002983.1_g000002 Rmu_sc0002983.1_g000005 Rmu_sc0002983.1_g000006 Rmu_sc0003832.1_g000010 Rmu_sc0003880.1_g000041 Rmu_sc0003880.1_g000043 Rmu_sc0003981.1_g000011 Rmu_sc0003981.1_g000016 Rmu_sc0004118.1_g000013 Rmu_sc0004125.1_g000008 Rmu_sc0004155.1_g000007 Rmu_sc0004155.1_g000008 Rmu_sc0004155.1_g000009 Rmu_sc0004465.1_g000004 Rmu_sc0004465.1_g000005 Rmu_sc0004755.1_g000030 Rmu_sc0005014.1_g000009 Rmu_sc0005023.1_g000027 Rmu_sc0005446.1_g000019 Rmu_sc0006273.1_g000001 Rmu_sc0006948.1_g000020 Rmu_sc0007412.1_g000005 Rmu_sc0007996.1_g000001 Rmu_sc0009749.1_g000002 Rmu_sc0011497.1_g000008 Rmu_sc0011497.1_g000009 Rmu_sc0011497.1_g000010 Rmu_sc0012018.1_g000001 Rmu_sc0012347.1_g000004 Rmu_sc0012347.1_g000005 Rmu_sc0013290.1_g000001 Rmu_sc0013576.1_g000009 Rmu_sc0013576.1_g000011 Rmu_sc0014354.1_g000001 Rmu_sc0014482.1_g000006 Rmu_sc0016848.1_g000001 Rmu_sc0018723.1_g000002 Rmu_sc0018723.1_g000003 Rmu_sc0020085.1_g000001 Rmu_sc0022367.1_g000001 Rmu_sc0023661.1_g000001 Rmu_sc0030814.1_g000001 Rmu_sc0034982.1_g000001 Rmu_sc0036901.1_g000001 Rmu_ssc0000064.1_g000016 Rmu_ssc0000170.1_g000012 Rmu_ssc0000170.1_g000014 Rmu_ssc0000189.1_g000048 Rmu_ssc0000443.1_g000005
rosa_roxburghii Rroxscaffold_159G00432950 Rroxscaffold_1G00015760 Rroxscaffold_1G00015770 Rroxscaffold_1G00015780 Rroxscaffold_1G00015950 Rroxscaffold_1G00015980 Rroxscaffold_1G00018050 Rroxscaffold_1G00018060 Rroxscaffold_1G00020330 Rroxscaffold_1G00020340 Rroxscaffold_1G00020350 Rroxscaffold_1G00020370 Rroxscaffold_1G00021720 Rroxscaffold_1G00034800 Rroxscaffold_1G00036050 Rroxscaffold_1G00036060 Rroxscaffold_1G00036070 Rroxscaffold_1G00036160 Rroxscaffold_1G00036170 Rroxscaffold_1G00043200 Rroxscaffold_1G00043210 Rroxscaffold_1G00047700 Rroxscaffold_1G00055120 Rroxscaffold_1G00056300 Rroxscaffold_1G00056320 Rroxscaffold_1G00064030 Rroxscaffold_1G00064050 Rroxscaffold_1G00064110 Rroxscaffold_1G00064130 Rroxscaffold_1G00064140 Rroxscaffold_1G00069580 Rroxscaffold_1G00069590 Rroxscaffold_1G00069600 Rroxscaffold_2G00086000 Rroxscaffold_2G00095520 Rroxscaffold_2G00095530 Rroxscaffold_2G00102950 Rroxscaffold_2G00102960 Rroxscaffold_2G00102980 Rroxscaffold_2G00111430 Rroxscaffold_2G00111440 Rroxscaffold_2G00123850 Rroxscaffold_2G00123860 Rroxscaffold_2G00123870 Rroxscaffold_2G00127600 Rroxscaffold_2G00128430 Rroxscaffold_2G00128440 Rroxscaffold_2G00134550 Rroxscaffold_2G00134560 Rroxscaffold_2G00134570 Rroxscaffold_2G00150440 Rroxscaffold_2G00150450 Rroxscaffold_3G00221670 Rroxscaffold_3G00231550 Rroxscaffold_3G00231560 Rroxscaffold_3G00231580 Rroxscaffold_3G00231590 Rroxscaffold_3G00238200 Rroxscaffold_3G00238210 Rroxscaffold_3G00259430 Rroxscaffold_3G00271580 Rroxscaffold_3G00271590 Rroxscaffold_4G00277030 Rroxscaffold_4G00277050 Rroxscaffold_4G00277060 Rroxscaffold_4G00277070 Rroxscaffold_4G00293250 Rroxscaffold_4G00293260 Rroxscaffold_4G00300140 Rroxscaffold_4G00308740 Rroxscaffold_4G00309540 Rroxscaffold_4G00319500 Rroxscaffold_4G00325410 Rroxscaffold_4G00328420 Rroxscaffold_4G00329630 Rroxscaffold_5G00339100 Rroxscaffold_5G00339110 Rroxscaffold_5G00339130 Rroxscaffold_5G00349460 Rroxscaffold_5G00349470 Rroxscaffold_5G00349480 Rroxscaffold_5G00349490 Rroxscaffold_5G00349800 Rroxscaffold_5G00354000 Rroxscaffold_5G00357420 Rroxscaffold_5G00357430 Rroxscaffold_5G00366730 Rroxscaffold_5G00366740 Rroxscaffold_5G00366750 Rroxscaffold_5G00371380 Rroxscaffold_5G00371390 Rroxscaffold_5G00371410 Rroxscaffold_6G00390390 Rroxscaffold_6G00390400 Rroxscaffold_6G00390410 Rroxscaffold_6G00391800 Rroxscaffold_6G00391810 Rroxscaffold_6G00399200 Rroxscaffold_6G00403500 Rroxscaffold_6G00403510 Rroxscaffold_6G00403520 Rroxscaffold_6G00407230 Rroxscaffold_6G00411100 Rroxscaffold_6G00411700 Rroxscaffold_6G00415300 Rroxscaffold_6G00415310 Rroxscaffold_6G00422180 Rroxscaffold_6G00422200 Rroxscaffold_6G00422210 Rroxscaffold_7G00157710 Rroxscaffold_7G00157720 Rroxscaffold_7G00157740 Rroxscaffold_7G00194140 Rroxscaffold_7G00196750 Rroxscaffold_7G00197960 Rroxscaffold_7G00208750 Rroxscaffold_7G00208760 Rroxscaffold_7G00208780 Rroxscaffold_7G00213740 Rroxscaffold_7G00215180 Rroxscaffold_7G00215190 Rroxscaffold_7G00215200
rosa_rugosa Rorug03G0270600 Rorug05G0169200
rosa_samantha Rh1AG048500 Rh1AG091500 Rh1AG190900 Rh2BG351700 Rh2BG494300 Rh2BG539800 Rh3BG209100 Rh4CG136600 Rh4CG194800 Rh4CG381100 Rh5BG080500 Rh5BG083000 Rh5BG083100 Rh5BG124000 Rh5BG126200 Rh5BG131000 Rh5BG158900 Rh5BG284300 Rh5BG310800 Rh5BG437700 Rh6AG114700 Rh6AG126300 Rh6AG202500 Rh7CG009000 Rh7CG320700 Rh7CG355200 Rh7CG514200
rosa_wichuraiana Rw5G018600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 969
AciI CCGC 1 cut(s) 432
AclWI GGATC 3 cut(s) 442, 991, 1240
AcsI RAATTY 1 cut(s) 390
AcuI CTGAAG 2 cut(s) 1257, 1338
AfeI AGCGCT 1 cut(s) 613
AflII CTTAAG 1 cut(s) 950
AgsI TTSAA 8 cut(s) 88, 482, 620, 722, 962, 1027, 1115, 1327
AjiI CACGTC 1 cut(s) 263
AjnI CCWGG 1 cut(s) 265
AjuI GAANNNNNNNTTGG 2 cut(s) 102, 134
AluBI AGCT 4 cut(s) 55, 500, 764, 1241
AluI AGCT 4 cut(s) 55, 500, 764, 1241
Alw21I GWGCWC 2 cut(s) 860, 1137
Alw44I GTGCAC 1 cut(s) 856
AlwI GGATC 3 cut(s) 442, 991, 1240
AlwNI CAGNNNCTG 1 cut(s) 1361
Aor51HI AGCGCT 1 cut(s) 613
AoxI GGCC 2 cut(s) 330, 820
ApaLI GTGCAC 1 cut(s) 856
ApeKI GCWGC 3 cut(s) 500, 1148, 1373
ApoI RAATTY 1 cut(s) 390
AspLEI GCGC 1 cut(s) 614
AspS9I GGNCC 1 cut(s) 331
AsuHPI GGTGA 6 cut(s) 281, 465, 507, 684, 763, 1082
AxyI CCTNAGG 1 cut(s) 336
BaeGI GKGCMC 1 cut(s) 860
BaeI ACNNNNGTAYC 2 cut(s) 659, 692
BbsI GAAGAC 1 cut(s) 1170
Bbv12I GWGCWC 2 cut(s) 860, 1137
BbvI GCAGC 3 cut(s) 487, 1160, 1360
BceAI ACGGC 1 cut(s) 441
BciT130I CCWGG 1 cut(s) 267
BfaI CTAG 4 cut(s) 306, 414, 891, 1076
BfmI CTRYAG 1 cut(s) 438
BfoI RGCGCY 1 cut(s) 615
BfrI CTTAAG 1 cut(s) 950
BisI GCNGC 3 cut(s) 501, 1149, 1374
BlsI GCNGC 3 cut(s) 502, 1150, 1375
Bme1390I CCNGG 1 cut(s) 267
BmgBI CACGTC 1 cut(s) 263
BmgT120I GGNCC 1 cut(s) 331
BmiI GGNNCC 1 cut(s) 333
BmrFI CCNGG 1 cut(s) 267
BmsI GCATC 2 cut(s) 544, 1227
BoxI GACNNNNGTC 1 cut(s) 469
BpiI GAAGAC 1 cut(s) 1170
BplI GAGNNNNNCTC 2 cut(s) 170, 202
BpuEI CTTGAG 1 cut(s) 77
BsaJI CCNNGG 2 cut(s) 423, 978
BsaXI ACNNNNNCTCC 8 cut(s) 134, 164, 277, 307, 613, 643, 929, 959
Bse1I ACTGG 3 cut(s) 159, 643, 1188
Bse21I CCTNAGG 1 cut(s) 336
Bse3DI GCAATG 1 cut(s) 1265
BseBI CCWGG 1 cut(s) 267
BseDI CCNNGG 2 cut(s) 423, 978
BseMI GCAATG 1 cut(s) 1265
BseMII CTCAG 5 cut(s) 228, 350, 756, 822, 1353
BseNI ACTGG 3 cut(s) 159, 643, 1188
BseRI GAGGAG 1 cut(s) 116
BseSI GKGCMC 1 cut(s) 860
BseXI GCAGC 3 cut(s) 487, 1160, 1360
BsgI GTGCAG 1 cut(s) 486
BshFI GGCC 2 cut(s) 332, 822
BsiHKAI GWGCWC 2 cut(s) 860, 1137
BsmI GAATGC 2 cut(s) 488, 1058
BsnI GGCC 2 cut(s) 332, 822
Bsp1286I GDGCHC 2 cut(s) 860, 1137
Bsp143I GATC 4 cut(s) 434, 681, 983, 1232
BspACI CCGC 1 cut(s) 432
BspANI GGCC 2 cut(s) 332, 822
BspCNI CTCAG 5 cut(s) 229, 349, 757, 821, 1354
BspLI GGNNCC 1 cut(s) 333
BspMAI CTGCAG 1 cut(s) 442
BspPI GGATC 3 cut(s) 442, 991, 1240
BspTI CTTAAG 1 cut(s) 950
BsrDI GCAATG 1 cut(s) 1265
BsrI ACTGG 3 cut(s) 159, 643, 1188
BssECI CCNNGG 2 cut(s) 423, 978
BssMI GATC 4 cut(s) 434, 681, 983, 1232
BssT1I CCWWGG 1 cut(s) 978
Bst2UI CCWGG 1 cut(s) 267
Bst4CI ACNGT 2 cut(s) 737, 1126
Bst6I CTCTTC 3 cut(s) 24, 66, 129
BstAFI CTTAAG 1 cut(s) 950
BstC8I GCNNGC 5 cut(s) 359, 430, 559, 924, 1272
BstDEI CTNAG 6 cut(s) 237, 336, 765, 808, 1362, 1377
BstDSI CCRYGG 1 cut(s) 423
BstH2I RGCGCY 1 cut(s) 615
BstHHI GCGC 1 cut(s) 614
BstKTI GATC 4 cut(s) 437, 684, 986, 1235
BstMBI GATC 4 cut(s) 434, 681, 983, 1232
BstMWI GCNNNNNNNGC 2 cut(s) 497, 1010
BstNI CCWGG 1 cut(s) 267
BstPAI GACNNNNGTC 1 cut(s) 469
BstSCI CCNGG 1 cut(s) 265
BstSFI CTRYAG 1 cut(s) 438
BstSLI GKGCMC 1 cut(s) 860
BstV1I GCAGC 3 cut(s) 487, 1160, 1360
BstV2I GAAGAC 1 cut(s) 1170
BstX2I RGATCY 3 cut(s) 434, 983, 1232
BstYI RGATCY 3 cut(s) 434, 983, 1232
Bsu36I CCTNAGG 1 cut(s) 336
BsuRI GGCC 2 cut(s) 332, 822
BtgI CCRYGG 1 cut(s) 423
BtrI CACGTC 1 cut(s) 263
BtsI GCAGTG 1 cut(s) 1338
BtsIMutI CAGTG 5 cut(s) 188, 1131, 1195, 1314, 1338
Cac8I GCNNGC 5 cut(s) 359, 430, 559, 924, 1272
CaiI CAGNNNCTG 1 cut(s) 1361
CfoI GCGC 1 cut(s) 614
Cfr13I GGNCC 1 cut(s) 331
DdeI CTNAG 6 cut(s) 237, 336, 765, 808, 1362, 1377
DpnI GATC 4 cut(s) 436, 683, 985, 1234
DpnII GATC 4 cut(s) 434, 681, 983, 1232
Eam1104I CTCTTC 3 cut(s) 24, 66, 129
EarI CTCTTC 3 cut(s) 24, 66, 129
Eco130I CCWWGG 1 cut(s) 978
Eco47III AGCGCT 1 cut(s) 613
Eco57I CTGAAG 2 cut(s) 1257, 1338
Eco81I CCTNAGG 1 cut(s) 336
EcoO109I RGGNCCY 1 cut(s) 331
EcoRI GAATTC 1 cut(s) 390
EcoRII CCWGG 1 cut(s) 265
EcoT14I CCWWGG 1 cut(s) 978
EcoT22I ATGCAT 2 cut(s) 589, 1220
ErhI CCWWGG 1 cut(s) 978
Fnu4HI GCNGC 3 cut(s) 501, 1149, 1374
Fsp4HI GCNGC 3 cut(s) 501, 1149, 1374
FspBI CTAG 4 cut(s) 306, 414, 891, 1076
GlaI GCGC 1 cut(s) 613
GluI GCNGC 3 cut(s) 501, 1149, 1374
HaeII RGCGCY 1 cut(s) 615
HaeIII GGCC 2 cut(s) 332, 822
HhaI GCGC 1 cut(s) 614
Hin6I GCGC 1 cut(s) 612
HinP1I GCGC 1 cut(s) 612
HincII GTYRAC 1 cut(s) 910
HindII GTYRAC 1 cut(s) 910
HindIII AAGCTT 2 cut(s) 53, 1239
HinfI GANTC 8 cut(s) 248, 281, 419, 512, 806, 812, 955, 1207
HphI GGTGA 6 cut(s) 281, 465, 507, 684, 763, 1082
Hpy166II GTNNAC 4 cut(s) 771, 858, 910, 1073
Hpy188I TCNGA 6 cut(s) 382, 609, 681, 811, 1093, 1237
Hpy188III TCNNGA 2 cut(s) 338, 891
Hpy8I GTNNAC 4 cut(s) 771, 858, 910, 1073
HpyAV CCTTC 3 cut(s) 133, 928, 1049
HpyCH4III ACNGT 2 cut(s) 737, 1126
HpyCH4IV ACGT 2 cut(s) 262, 717
HpyF10VI GCNNNNNNNGC 2 cut(s) 497, 1010
HpyF3I CTNAG 6 cut(s) 237, 336, 765, 808, 1362, 1377
HpySE526I ACGT 2 cut(s) 262, 717
HspAI GCGC 1 cut(s) 612
Kzo9I GATC 4 cut(s) 434, 681, 983, 1232
LmnI GCTCC 1 cut(s) 979
Lsp1109I GCAGC 3 cut(s) 487, 1160, 1360
LweI GCATC 2 cut(s) 544, 1227
MaeI CTAG 4 cut(s) 306, 414, 891, 1076
MaeII ACGT 2 cut(s) 262, 717
MaeIII GTNAC 3 cut(s) 150, 471, 1156
MalI GATC 4 cut(s) 436, 683, 985, 1234
MboI GATC 4 cut(s) 434, 681, 983, 1232
MfeI CAATTG 2 cut(s) 209, 1275
MflI RGATCY 3 cut(s) 434, 983, 1232
MhlI GDGCHC 2 cut(s) 860, 1137
MlyI GAGTC 4 cut(s) 257, 275, 413, 800
MmeI TCCRAC 1 cut(s) 627
Mph1103I ATGCAT 2 cut(s) 589, 1220
MseI TTAA 7 cut(s) 195, 534, 582, 951, 1142, 1212, 1254
MslI CAYNNNNRTG 2 cut(s) 224, 481
MspCI CTTAAG 1 cut(s) 950
MspR9I CCNGG 1 cut(s) 267
MunI CAATTG 2 cut(s) 209, 1275
Mva1269I GAATGC 2 cut(s) 488, 1058
MvaI CCWGG 1 cut(s) 267
MwoI GCNNNNNNNGC 2 cut(s) 497, 1010
NdeII GATC 4 cut(s) 434, 681, 983, 1232
NlaIV GGNNCC 1 cut(s) 333
NmuCI GTSAC 2 cut(s) 471, 1156
NsiI ATGCAT 2 cut(s) 589, 1220
PctI GAATGC 2 cut(s) 488, 1058
PfeI GAWTC 4 cut(s) 512, 812, 955, 1207
PkrI GCNGC 3 cut(s) 502, 1150, 1375
PleI GAGTC 4 cut(s) 256, 275, 413, 800
PpsI GAGTC 4 cut(s) 256, 275, 413, 800
PshAI GACNNNNGTC 1 cut(s) 469
PsiI TTATAA 1 cut(s) 969
Psp6I CCWGG 1 cut(s) 265
PspGI CCWGG 1 cut(s) 265
PspN4I GGNNCC 1 cut(s) 333
PspPI GGNCC 1 cut(s) 331
PstI CTGCAG 1 cut(s) 442
PstNI CAGNNNCTG 1 cut(s) 1361
PsuI RGATCY 3 cut(s) 434, 983, 1232
RseI CAYNNNNRTG 2 cut(s) 224, 481
SaqAI TTAA 7 cut(s) 195, 534, 582, 951, 1142, 1212, 1254
SatI GCNGC 3 cut(s) 501, 1149, 1374
Sau3AI GATC 4 cut(s) 434, 681, 983, 1232
Sau96I GGNCC 1 cut(s) 331
SchI GAGTC 4 cut(s) 257, 275, 413, 800
ScrFI CCNGG 1 cut(s) 267
SduI GDGCHC 2 cut(s) 860, 1137
SfaNI GCATC 2 cut(s) 544, 1227
SfcI CTRYAG 1 cut(s) 438
SmiMI CAYNNNNRTG 2 cut(s) 224, 481
SmlI CTYRAG 2 cut(s) 56, 950
SmoI CTYRAG 2 cut(s) 56, 950
SsiI CCGC 1 cut(s) 432
SspI AATATT 1 cut(s) 783
SspMI CTAG 4 cut(s) 306, 414, 891, 1076
StyD4I CCNGG 1 cut(s) 265
StyI CCWWGG 1 cut(s) 978
TaaI ACNGT 2 cut(s) 737, 1126
TaiI ACGT 2 cut(s) 265, 720
TaqII GACCGA 1 cut(s) 38
TfiI GAWTC 4 cut(s) 512, 812, 955, 1207
Tru1I TTAA 7 cut(s) 195, 534, 582, 951, 1142, 1212, 1254
Tru9I TTAA 7 cut(s) 195, 534, 582, 951, 1142, 1212, 1254
TscAI CASTG 5 cut(s) 195, 1131, 1195, 1321, 1338
TseFI GTSAC 2 cut(s) 471, 1156
TseI GCWGC 3 cut(s) 500, 1148, 1373
Tsp45I GTSAC 2 cut(s) 471, 1156
TspDTI ATGAA 7 cut(s) 42, 54, 868, 947, 1068, 1296, 1314
TspRI CASTG 5 cut(s) 195, 1131, 1195, 1321, 1338
Vha464I CTTAAG 1 cut(s) 950
VneI GTGCAC 1 cut(s) 856
XapI RAATTY 1 cut(s) 390
XbaI TCTAGA 1 cut(s) 890
XcmI CCANNNNNNNNNTGG 1 cut(s) 573
XspI CTAG 4 cut(s) 306, 414, 891, 1076
Zsp2I ATGCAT 2 cut(s) 589, 1220
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.