Rroxscaffold_1G00056300

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000100
Physical Location & Seq
Reverse (-)
78088971 .. 78091188
2218 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00056300.1

Sequence Viewer

Length: 1041 bp
ATGTGCAGTATCGCTGCACAATGCTTGCTTTTCGAAAACAATTGCGAGAAAACAAAAATAACTCCGACCGAAGGGACTTTAGAGCTGCTGCAGAAAACACCCTTTGCAACGCCGATAGATGCATTCCATGGAGGTTCAATTAAAGAAAAGGATGCAAAGAAATCGGATGATTTAATCACACTTCTGCTACAAGCTTACGACGGCGACACGAGACCTTTTTGTGTTTGGGAACAGGAAATTCGAATGTCGGCAAGTGATATATCTATGATTTTAGGAGTGCCGAATACGGGTTATCGTACCAAAGACCAAAGAATGGGCATACAGATCGAGTTCGTGACTAAATACTTCGACAAAAAGCGAGAGGATCAACAAGGCGGCTGCAGAGGAAGCTTTGAAGAAGGCATTGGCGAAACTCCGAAACGGGGAGAAGAAAAAACGAAACGGGACAGAAATGTTGCTGTATTAGTACTCTTGAACCTTTTCATCAAACTCCCTGTTCCCAAACTCGGAGGAACAATATCTTGGGATTATATAAGAGTACGTGAAGAGGTGGAAAGTCCGGGAAAATATAGCTGGGCAAAGGAAGTTGGCGACTTCCTTAAAAAATCAATTAAACGAAAGGGAAAAGATTCACAAAACATGGCAGGTTGCGTGATATTGGTGATGAAGGATGATGTGTTAATGGAAAATGAGGTGCTGAAAGTTGAGAGAGCCTCACCGATTAAAAGAGTGAAGCAATTGGAGGGCATAGTGATGGCACTAACCGAGAAGTATGAGTCTCCAATAGCACGTCCAGGTGATGACAACTACTCAACTCCTCCTCCACCACCACCTAGTTTCCCTCCACCAAAATCAAAGGCCCCTCAGACAAGCCAACCGACAAGCAAGCACTCCAAAAACACAAAATCTCAAGTCGGAATTCAGAAACTCAATCACAACCTCGCCTACTCCACAAAGAAGCGCATCCGAGATGACATCTGCAGCAACCCGACTCTACCAACCGAGGACATCGGTCACCACTTGAATGCCTTGCCCAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1985 PMD

Protein Analysis

346

Amino Acids

38.77

Weight (kDa)

8.95

Isoelectric Point (pI)

42.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000100)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr6g0248691
rosa_multiflora Rmu_co8124940.1_g000001 Rmu_co8378695.1_g000001 Rmu_sc0000023.1_g000005 Rmu_sc0000149.1_g000044 Rmu_sc0000195.1_g000019 Rmu_sc0000270.1_g000002 Rmu_sc0000270.1_g000003 Rmu_sc0000433.1_g000016 Rmu_sc0000493.1_g000067 Rmu_sc0000493.1_g000069 Rmu_sc0000493.1_g000070 Rmu_sc0000493.1_g000071 Rmu_sc0000532.1_g000015 Rmu_sc0000532.1_g000017 Rmu_sc0000552.1_g000004 Rmu_sc0000692.1_g000012 Rmu_sc0000733.1_g000017 Rmu_sc0000738.1_g000026 Rmu_sc0000738.1_g000027 Rmu_sc0000738.1_g000028 Rmu_sc0000738.1_g000030 Rmu_sc0000806.1_g000006 Rmu_sc0000863.1_g000026 Rmu_sc0000863.1_g000027 Rmu_sc0000863.1_g000028 Rmu_sc0000863.1_g000029 Rmu_sc0000863.1_g000030 Rmu_sc0000885.1_g000001 Rmu_sc0001168.1_g000020 Rmu_sc0001168.1_g000021 Rmu_sc0001214.1_g000031 Rmu_sc0001214.1_g000032 Rmu_sc0001239.1_g000003 Rmu_sc0001355.1_g000003 Rmu_sc0001373.1_g000008 Rmu_sc0001373.1_g000009 Rmu_sc0001373.1_g000010 Rmu_sc0001587.1_g000003 Rmu_sc0001648.1_g000020 Rmu_sc0001648.1_g000021 Rmu_sc0001648.1_g000022 Rmu_sc0001648.1_g000023 Rmu_sc0001836.1_g000052 Rmu_sc0001836.1_g000053 Rmu_sc0001913.1_g000025 Rmu_sc0001913.1_g000030 Rmu_sc0001938.1_g000005 Rmu_sc0001938.1_g000007 Rmu_sc0001977.1_g000016 Rmu_sc0001977.1_g000017 Rmu_sc0001977.1_g000018 Rmu_sc0001977.1_g000019 Rmu_sc0002080.1_g000031 Rmu_sc0002095.1_g000011 Rmu_sc0002095.1_g000012 Rmu_sc0002202.1_g000002 Rmu_sc0002202.1_g000004 Rmu_sc0002765.1_g000012 Rmu_sc0002955.1_g000003 Rmu_sc0002983.1_g000001 Rmu_sc0002983.1_g000002 Rmu_sc0002983.1_g000005 Rmu_sc0002983.1_g000006 Rmu_sc0003832.1_g000010 Rmu_sc0003880.1_g000041 Rmu_sc0003880.1_g000043 Rmu_sc0003981.1_g000011 Rmu_sc0003981.1_g000016 Rmu_sc0004118.1_g000013 Rmu_sc0004125.1_g000008 Rmu_sc0004155.1_g000007 Rmu_sc0004155.1_g000008 Rmu_sc0004155.1_g000009 Rmu_sc0004465.1_g000004 Rmu_sc0004465.1_g000005 Rmu_sc0004755.1_g000030 Rmu_sc0005014.1_g000009 Rmu_sc0005023.1_g000027 Rmu_sc0005446.1_g000019 Rmu_sc0006273.1_g000001 Rmu_sc0006948.1_g000020 Rmu_sc0007412.1_g000005 Rmu_sc0007996.1_g000001 Rmu_sc0009749.1_g000002 Rmu_sc0011497.1_g000008 Rmu_sc0011497.1_g000009 Rmu_sc0011497.1_g000010 Rmu_sc0012018.1_g000001 Rmu_sc0012347.1_g000004 Rmu_sc0012347.1_g000005 Rmu_sc0013290.1_g000001 Rmu_sc0013576.1_g000009 Rmu_sc0013576.1_g000011 Rmu_sc0014354.1_g000001 Rmu_sc0014482.1_g000006 Rmu_sc0016848.1_g000001 Rmu_sc0018723.1_g000002 Rmu_sc0018723.1_g000003 Rmu_sc0020085.1_g000001 Rmu_sc0022367.1_g000001 Rmu_sc0023661.1_g000001 Rmu_sc0030814.1_g000001 Rmu_sc0034982.1_g000001 Rmu_sc0036901.1_g000001 Rmu_ssc0000064.1_g000016 Rmu_ssc0000170.1_g000012 Rmu_ssc0000170.1_g000014 Rmu_ssc0000189.1_g000048 Rmu_ssc0000443.1_g000005
rosa_roxburghii Rroxscaffold_159G00432950 Rroxscaffold_1G00015760 Rroxscaffold_1G00015770 Rroxscaffold_1G00015780 Rroxscaffold_1G00015950 Rroxscaffold_1G00015980 Rroxscaffold_1G00018050 Rroxscaffold_1G00018060 Rroxscaffold_1G00020330 Rroxscaffold_1G00020340 Rroxscaffold_1G00020350 Rroxscaffold_1G00020370 Rroxscaffold_1G00021720 Rroxscaffold_1G00034800 Rroxscaffold_1G00036050 Rroxscaffold_1G00036060 Rroxscaffold_1G00036070 Rroxscaffold_1G00036160 Rroxscaffold_1G00036170 Rroxscaffold_1G00043200 Rroxscaffold_1G00043210 Rroxscaffold_1G00047700 Rroxscaffold_1G00055120 Rroxscaffold_1G00056300 Rroxscaffold_1G00056320 Rroxscaffold_1G00064030 Rroxscaffold_1G00064050 Rroxscaffold_1G00064110 Rroxscaffold_1G00064130 Rroxscaffold_1G00064140 Rroxscaffold_1G00069580 Rroxscaffold_1G00069590 Rroxscaffold_1G00069600 Rroxscaffold_2G00086000 Rroxscaffold_2G00095520 Rroxscaffold_2G00095530 Rroxscaffold_2G00102950 Rroxscaffold_2G00102960 Rroxscaffold_2G00102980 Rroxscaffold_2G00111430 Rroxscaffold_2G00111440 Rroxscaffold_2G00123850 Rroxscaffold_2G00123860 Rroxscaffold_2G00123870 Rroxscaffold_2G00127600 Rroxscaffold_2G00128430 Rroxscaffold_2G00128440 Rroxscaffold_2G00134550 Rroxscaffold_2G00134560 Rroxscaffold_2G00134570 Rroxscaffold_2G00150440 Rroxscaffold_2G00150450 Rroxscaffold_3G00221670 Rroxscaffold_3G00231550 Rroxscaffold_3G00231560 Rroxscaffold_3G00231580 Rroxscaffold_3G00231590 Rroxscaffold_3G00238200 Rroxscaffold_3G00238210 Rroxscaffold_3G00259430 Rroxscaffold_3G00271580 Rroxscaffold_3G00271590 Rroxscaffold_4G00277030 Rroxscaffold_4G00277050 Rroxscaffold_4G00277060 Rroxscaffold_4G00277070 Rroxscaffold_4G00293250 Rroxscaffold_4G00293260 Rroxscaffold_4G00300140 Rroxscaffold_4G00308740 Rroxscaffold_4G00309540 Rroxscaffold_4G00319500 Rroxscaffold_4G00325410 Rroxscaffold_4G00328420 Rroxscaffold_4G00329630 Rroxscaffold_5G00339100 Rroxscaffold_5G00339110 Rroxscaffold_5G00339130 Rroxscaffold_5G00349460 Rroxscaffold_5G00349470 Rroxscaffold_5G00349480 Rroxscaffold_5G00349490 Rroxscaffold_5G00349800 Rroxscaffold_5G00354000 Rroxscaffold_5G00357420 Rroxscaffold_5G00357430 Rroxscaffold_5G00366730 Rroxscaffold_5G00366740 Rroxscaffold_5G00366750 Rroxscaffold_5G00371380 Rroxscaffold_5G00371390 Rroxscaffold_5G00371410 Rroxscaffold_6G00390390 Rroxscaffold_6G00390400 Rroxscaffold_6G00390410 Rroxscaffold_6G00391800 Rroxscaffold_6G00391810 Rroxscaffold_6G00399200 Rroxscaffold_6G00403500 Rroxscaffold_6G00403510 Rroxscaffold_6G00403520 Rroxscaffold_6G00407230 Rroxscaffold_6G00411100 Rroxscaffold_6G00411700 Rroxscaffold_6G00415300 Rroxscaffold_6G00415310 Rroxscaffold_6G00422180 Rroxscaffold_6G00422200 Rroxscaffold_6G00422210 Rroxscaffold_7G00157710 Rroxscaffold_7G00157720 Rroxscaffold_7G00157740 Rroxscaffold_7G00194140 Rroxscaffold_7G00196750 Rroxscaffold_7G00197960 Rroxscaffold_7G00208750 Rroxscaffold_7G00208760 Rroxscaffold_7G00208780 Rroxscaffold_7G00213740 Rroxscaffold_7G00215180 Rroxscaffold_7G00215190 Rroxscaffold_7G00215200
rosa_rugosa Rorug03G0270600 Rorug05G0169200
rosa_samantha Rh1AG048500 Rh1AG091500 Rh1AG190900 Rh2BG351700 Rh2BG494300 Rh2BG539800 Rh3BG209100 Rh4CG136600 Rh4CG194800 Rh4CG381100 Rh5BG080500 Rh5BG083000 Rh5BG083100 Rh5BG124000 Rh5BG126200 Rh5BG131000 Rh5BG158900 Rh5BG284300 Rh5BG310800 Rh5BG437700 Rh6AG114700 Rh6AG126300 Rh6AG202500 Rh7CG009000 Rh7CG320700 Rh7CG355200 Rh7CG514200
rosa_wichuraiana Rw5G018600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 635
AccB7I CCANNNNNTGG 1 cut(s) 313
AciI CCGC 1 cut(s) 375
AclWI GGATC 1 cut(s) 372
AcsI RAATTY 2 cut(s) 237, 918
AfaI GTAC 3 cut(s) 298, 468, 540
AfiI CCNNNNNNNGG 5 cut(s) 71, 287, 313, 422, 506
AgsI TTSAA 4 cut(s) 138, 395, 475, 1024
AjiI CACGTC 1 cut(s) 791
AjnI CCWGG 1 cut(s) 793
AjuI GAANNNNNNNTTGG 4 cut(s) 387, 419, 505, 537
AluBI AGCT 4 cut(s) 85, 194, 390, 573
AluI AGCT 4 cut(s) 85, 194, 390, 573
Alw26I GTCTC 2 cut(s) 205, 783
AlwI GGATC 1 cut(s) 372
AoxI GGCC 1 cut(s) 858
ApeKI GCWGC 5 cut(s) 14, 85, 88, 378, 981
ApoI RAATTY 2 cut(s) 237, 918
Asp700I GAANNNNTTC 2 cut(s) 479, 628
AspLEI GCGC 1 cut(s) 963
AspS9I GGNCC 1 cut(s) 859
AsuC2I CCSGG 1 cut(s) 561
AsuHPI GGTGA 4 cut(s) 673, 708, 809, 1007
AsuII TTCGAA 2 cut(s) 33, 241
BauI CACGAG 1 cut(s) 208
BbvI GCAGC 4 cut(s) 72, 75, 365, 993
BccI CCATC 1 cut(s) 748
BceAI ACGGC 1 cut(s) 217
BcgI CGANNNNNNTGC 4 cut(s) 144, 178, 307, 341
BciT130I CCWGG 1 cut(s) 795
BcnI CCSGG 1 cut(s) 561
BcoDI GTCTC 2 cut(s) 205, 783
BfaI CTAG 1 cut(s) 834
BfmI CTRYAG 3 cut(s) 89, 379, 979
BfuAI ACCTGC 1 cut(s) 635
BisI GCNGC 6 cut(s) 15, 86, 89, 376, 379, 982
BlsI GCNGC 6 cut(s) 16, 87, 90, 377, 380, 983
BmcAI AGTACT 1 cut(s) 468
Bme1390I CCNGG 2 cut(s) 561, 795
BmgBI CACGTC 1 cut(s) 791
BmgT120I GGNCC 1 cut(s) 859
BmiI GGNNCC 1 cut(s) 861
BmrFI CCNGG 2 cut(s) 561, 795
BmsI GCATC 3 cut(s) 109, 142, 972
BoxI GACNNNNGTC 1 cut(s) 1011
BplI GAGNNNNNCTC 2 cut(s) 698, 730
Bpu14I TTCGAA 2 cut(s) 33, 241
BpuEI CTTGAG 1 cut(s) 894
BpuMI CCSGG 1 cut(s) 561
BsaAI YACGTR 1 cut(s) 542
BsaI GGTCTC 1 cut(s) 205
BsaJI CCNNGG 2 cut(s) 127, 1002
BsaXI ACNNNNNCTCC 2 cut(s) 805, 835
Bsc4I CCNNNNNNNGG 5 cut(s) 71, 287, 313, 422, 506
BseBI CCWGG 1 cut(s) 795
BseDI CCNNGG 2 cut(s) 127, 1002
BseGI GGATG 4 cut(s) 157, 172, 676, 963
BseLI CCNNNNNNNGG 5 cut(s) 71, 287, 313, 422, 506
BseMII CTCAG 1 cut(s) 878
BseRI GAGGAG 2 cut(s) 807, 810
BseXI GCAGC 4 cut(s) 72, 75, 365, 993
BseYI CCCAGC 1 cut(s) 573
BsgI GTGCAG 1 cut(s) 25
Bsh1285I CGRYCG 1 cut(s) 69
BshFI GGCC 1 cut(s) 860
BsiEI CGRYCG 1 cut(s) 69
BsiSI CCGG 1 cut(s) 560
BslFI GGGAC 2 cut(s) 88, 458
BslI CCNNNNNNNGG 5 cut(s) 71, 287, 313, 422, 506
BsmAI GTCTC 2 cut(s) 205, 783
BsmFI GGGAC 2 cut(s) 88, 458
BsmI GAATGC 2 cut(s) 122, 1030
BsnI GGCC 1 cut(s) 860
Bso31I GGTCTC 1 cut(s) 205
Bsp119I TTCGAA 2 cut(s) 33, 241
Bsp143I GATC 2 cut(s) 324, 364
Bsp19I CCATGG 1 cut(s) 127
BspACI CCGC 1 cut(s) 375
BspANI GGCC 1 cut(s) 860
BspCNI CTCAG 1 cut(s) 877
BspLI GGNNCC 1 cut(s) 861
BspMAI CTGCAG 3 cut(s) 93, 383, 983
BspMI ACCTGC 1 cut(s) 635
BspPI GGATC 1 cut(s) 372
BspT104I TTCGAA 2 cut(s) 33, 241
BspTNI GGTCTC 1 cut(s) 205
BssECI CCNNGG 2 cut(s) 127, 1002
BssMI GATC 2 cut(s) 324, 364
BssSI CACGAG 1 cut(s) 208
BssT1I CCWWGG 1 cut(s) 127
Bst2BI CACGAG 1 cut(s) 208
Bst2UI CCWGG 1 cut(s) 795
Bst6I CTCTTC 1 cut(s) 540
BstBAI YACGTR 1 cut(s) 542
BstBI TTCGAA 2 cut(s) 33, 241
BstC8I GCNNGC 2 cut(s) 26, 887
BstDEI CTNAG 1 cut(s) 864
BstDSI CCRYGG 1 cut(s) 127
BstEII GGTNACC 1 cut(s) 1013
BstF5I GGATG 4 cut(s) 157, 172, 676, 963
BstHHI GCGC 1 cut(s) 963
BstKTI GATC 2 cut(s) 327, 367
BstMAI GTCTC 2 cut(s) 205, 783
BstMBI GATC 2 cut(s) 324, 364
BstMCI CGRYCG 1 cut(s) 69
BstMWI GCNNNNNNNGC 1 cut(s) 387
BstNI CCWGG 1 cut(s) 795
BstPAI GACNNNNGTC 1 cut(s) 1011
BstPI GGTNACC 1 cut(s) 1013
BstSCI CCNGG 2 cut(s) 559, 793
BstSFI CTRYAG 3 cut(s) 89, 379, 979
BstV1I GCAGC 4 cut(s) 72, 75, 365, 993
BsuRI GGCC 1 cut(s) 860
BtgI CCRYGG 1 cut(s) 127
BtrI CACGTC 1 cut(s) 791
BtsCI GGATG 4 cut(s) 157, 172, 676, 963
BveI ACCTGC 1 cut(s) 635
Cac8I GCNNGC 2 cut(s) 26, 887
CfoI GCGC 1 cut(s) 963
Cfr13I GGNCC 1 cut(s) 859
Csp6I GTAC 3 cut(s) 297, 467, 539
CviAII CATG 2 cut(s) 128, 640
CviJI RGCY 8 cut(s) 85, 194, 378, 390, 573, 713, 860, 873
CviKI_1 RGCY 8 cut(s) 85, 194, 378, 390, 573, 713, 860, 873
CviQI GTAC 3 cut(s) 297, 467, 539
DdeI CTNAG 1 cut(s) 864
DpnI GATC 2 cut(s) 326, 366
DpnII GATC 2 cut(s) 324, 364
Eam1104I CTCTTC 1 cut(s) 540
EarI CTCTTC 1 cut(s) 540
Eco130I CCWWGG 1 cut(s) 127
Eco31I GGTCTC 1 cut(s) 205
Eco91I GGTNACC 1 cut(s) 1013
EcoO109I RGGNCCY 1 cut(s) 859
EcoO65I GGTNACC 1 cut(s) 1013
EcoRI GAATTC 1 cut(s) 918
EcoRII CCWGG 1 cut(s) 793
EcoT14I CCWWGG 1 cut(s) 127
EcoT22I ATGCAT 1 cut(s) 124
ErhI CCWWGG 1 cut(s) 127
FaeI CATG 2 cut(s) 131, 643
FaqI GGGAC 2 cut(s) 88, 458
FatI CATG 2 cut(s) 127, 639
Fnu4HI GCNGC 6 cut(s) 15, 86, 89, 376, 379, 982
FokI GGATG 4 cut(s) 164, 179, 683, 950
Fsp4HI GCNGC 6 cut(s) 15, 86, 89, 376, 379, 982
FspBI CTAG 1 cut(s) 834
GlaI GCGC 1 cut(s) 962
GluI GCNGC 6 cut(s) 15, 86, 89, 376, 379, 982
GsaI CCCAGC 1 cut(s) 577
HaeIII GGCC 1 cut(s) 860
HapII CCGG 1 cut(s) 560
HhaI GCGC 1 cut(s) 963
Hin1II CATG 2 cut(s) 131, 643
Hin6I GCGC 1 cut(s) 961
HinP1I GCGC 1 cut(s) 961
HindIII AAGCTT 2 cut(s) 192, 388
HinfI GANTC 3 cut(s) 629, 776, 991
HpaII CCGG 1 cut(s) 560
HphI GGTGA 4 cut(s) 673, 708, 809, 1007
Hpy188I TCNGA 8 cut(s) 66, 166, 417, 509, 867, 917, 924, 968
Hpy188III TCNNGA 2 cut(s) 334, 472
Hpy99I CGWCG 1 cut(s) 203
HpyAV CCTTC 3 cut(s) 65, 392, 661
HpyCH4IV ACGT 2 cut(s) 541, 790
HpyCH4V TGCA 8 cut(s) 6, 17, 91, 107, 122, 155, 381, 981
HpyF10VI GCNNNNNNNGC 1 cut(s) 387
HpyF3I CTNAG 1 cut(s) 864
HpySE526I ACGT 2 cut(s) 541, 790
Hsp92II CATG 2 cut(s) 131, 643
HspAI GCGC 1 cut(s) 961
Kzo9I GATC 2 cut(s) 324, 364
LpnPI CCDG 7 cut(s) 218, 507, 559, 573, 630, 780, 807
Lsp1109I GCAGC 4 cut(s) 72, 75, 365, 993
LweI GCATC 3 cut(s) 109, 142, 972
MaeI CTAG 1 cut(s) 834
MaeII ACGT 2 cut(s) 541, 790
MaeIII GTNAC 2 cut(s) 334, 1013
MalI GATC 2 cut(s) 326, 366
MboI GATC 2 cut(s) 324, 364
MboII GAAGA 3 cut(s) 407, 440, 557
MfeI CAATTG 2 cut(s) 40, 737
MluCI AATT 6 cut(s) 40, 138, 237, 609, 737, 918
MlyI GAGTC 2 cut(s) 785, 985
MmeI TCCRAC 2 cut(s) 89, 895
Mph1103I ATGCAT 1 cut(s) 124
MroXI GAANNNNTTC 2 cut(s) 479, 628
MseI TTAA 6 cut(s) 141, 173, 600, 612, 680, 723
MslI CAYNNNNRTG 2 cut(s) 752, 1023
MspI CCGG 1 cut(s) 560
MspR9I CCNGG 2 cut(s) 561, 795
MunI CAATTG 2 cut(s) 40, 737
Mva1269I GAATGC 2 cut(s) 122, 1030
MvaI CCWGG 1 cut(s) 795
MwoI GCNNNNNNNGC 1 cut(s) 387
NciI CCSGG 1 cut(s) 561
NcoI CCATGG 1 cut(s) 127
NdeII GATC 2 cut(s) 324, 364
NlaIII CATG 2 cut(s) 131, 643
NlaIV GGNNCC 1 cut(s) 861
NmuCI GTSAC 2 cut(s) 334, 1013
NsiI ATGCAT 1 cut(s) 124
NspV TTCGAA 2 cut(s) 33, 241
PctI GAATGC 2 cut(s) 122, 1030
PdmI GAANNNNTTC 2 cut(s) 479, 628
PfeI GAWTC 1 cut(s) 629
PflMI CCANNNNNTGG 1 cut(s) 313
PfoI TCCNGGA 1 cut(s) 559
PkrI GCNGC 6 cut(s) 16, 87, 90, 377, 380, 983
PleI GAGTC 2 cut(s) 784, 985
PpsI GAGTC 2 cut(s) 784, 985
Ppu21I YACGTR 1 cut(s) 542
PshAI GACNNNNGTC 1 cut(s) 1011
Psp6I CCWGG 1 cut(s) 793
PspEI GGTNACC 1 cut(s) 1013
PspFI CCCAGC 1 cut(s) 573
PspGI CCWGG 1 cut(s) 793
PspN4I GGNNCC 1 cut(s) 861
PspPI GGNCC 1 cut(s) 859
PstI CTGCAG 3 cut(s) 93, 383, 983
RsaI GTAC 3 cut(s) 298, 468, 540
RsaNI GTAC 3 cut(s) 297, 467, 539
RseI CAYNNNNRTG 2 cut(s) 752, 1023
SaqAI TTAA 6 cut(s) 141, 173, 600, 612, 680, 723
SatI GCNGC 6 cut(s) 15, 86, 89, 376, 379, 982
Sau3AI GATC 2 cut(s) 324, 364
Sau96I GGNCC 1 cut(s) 859
ScaI AGTACT 1 cut(s) 468
SchI GAGTC 2 cut(s) 785, 985
ScrFI CCNGG 2 cut(s) 561, 795
SfaNI GCATC 3 cut(s) 109, 142, 972
SfcI CTRYAG 3 cut(s) 89, 379, 979
SfuI TTCGAA 2 cut(s) 33, 241
SmiMI CAYNNNNRTG 2 cut(s) 752, 1023
SmlI CTYRAG 1 cut(s) 909
SmoI CTYRAG 1 cut(s) 909
Sse9I AATT 6 cut(s) 40, 138, 237, 609, 737, 918
SsiI CCGC 1 cut(s) 375
SspMI CTAG 1 cut(s) 834
StyD4I CCNGG 2 cut(s) 559, 793
StyI CCWWGG 1 cut(s) 127
TaiI ACGT 2 cut(s) 544, 793
TaqI TCGA 4 cut(s) 33, 241, 327, 348
TaqII GACCGA 2 cut(s) 83, 1001
TasI AATT 6 cut(s) 40, 138, 237, 609, 737, 918
TatI WGTACW 1 cut(s) 466
TauI GCSGC 1 cut(s) 378
TfiI GAWTC 1 cut(s) 629
Tru1I TTAA 6 cut(s) 141, 173, 600, 612, 680, 723
Tru9I TTAA 6 cut(s) 141, 173, 600, 612, 680, 723
TseFI GTSAC 2 cut(s) 334, 1013
TseI GCWGC 5 cut(s) 14, 85, 88, 378, 981
Tsp45I GTSAC 2 cut(s) 334, 1013
TspDTI ATGAA 2 cut(s) 472, 680
Van91I CCANNNNNTGG 1 cut(s) 313
XapI RAATTY 2 cut(s) 237, 918
XmnI GAANNNNTTC 2 cut(s) 479, 628
XspI CTAG 1 cut(s) 834
ZrmI AGTACT 1 cut(s) 468
Zsp2I ATGCAT 1 cut(s) 124
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.