Rw5G018600

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0000100
Physical Location & Seq
Reverse (-)
24001507 .. 24009972
8466 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G018600.1

Sequence Viewer

Length: 1770 bp
ATGAAAAGAAGAAGAAGAAAAAGAAGAACCATCACCGAAGAGATTGAAATAAAAAAAAAAGACAAGAAGAAACAGAAGAAGAAAGAACAATCACCAAAGAAGGATTCTGAAGTTCAAGAAGAAGTAGAAGAAAAACCTGAAGCAGCACCAAAGAGGAAAAAAAATGTGAAACCAGGACATGTGCAGTACAGGTGCACTTTAATAAGTTTCTTGAACACAATTAAAGATAACAAGCAGAATCTCAGTGCAAGAACATTAGATTTGCTCAGGCAGTCACCATTTGGAAACATTGTCGATGCATTCCATGGTGGCTACATAGAGGAGAAGTCAGCCAAGAAATCTGATGATTTCATTACACTCCTCCTACAGGCCTACGACCATGAAAATGACCTCTTCTTCTTTGGAAAGAAGAAATTCAGGATCTCGACAAGAGATATTTCAAAGATCCTAGGAATGCCAGAAAAAGGTGAGTTGGTCCCAAAGACTTCTGAGGGGGCATATCAGTCCGACTTTATCCAGCAGTTTTTTTCAAACACAGCGAGAATTAACAAGAGAGCCGTGGAGAAAGCTCTGCAAGATGCGCTCAAAGAGATGCAACAACAGAGGAAGGGATTGAGAAGAAGGACAAAAATAAATGTTGTCGTATTAATACTCTTGAACCTTTTCATCAAACTCCTGTTCCCAAACTCTGGAGGAACAATATCTTGGGACTATATAAGAGTCTGTGAAGAGGTGGAAAGTCTGGGAAAATATAGCTGGGCAAAGGAAGTTGGCGACTTCCTTAAAAAATCAATTAAACGAAAAGGAAAAGAATCCCAAAACATGGCAGGTTGCGTGATATTGGTGATGTACTGGTTTTGCCACAAGACGGGAGTAGTGCCGCCAATCTCTGGAAGAGAAACCGAAAAACACGGAATAAGAAAGTGGCAATTAAAGACCCTGATAGAAAAAAAAAAAAAGGGATTTCAACACCATGGGGAAAAAATCTTTGATAAAGTTAAAGAAGATGCAGAGGAAGAAGATTCTGAGTCTAATACAGACACAGAAAGTAAAGAAAAAAAGAATGATGGGCAAGAAGAAAATGTTGAAACTAGAACCAGTGGAAATATGGTGAAGGAGACTGCATCGAATGATAAACAGAAGAAAGAATTAGAGACAAATCTTCAGAAAAAGGAAGAAGAGCTAAGAGAGGTGGAAATAGAGAAAAAAGTCTTGGAAGAAAAAATAAGGAAATTGCAGAAAGAACTGGAAACAAGAGAAAAGAAAGGTGACAACATTAACAATGAGAAGATGGAGACAGAGATACGAAAGACCAATGAAGAGAAGAATGAATTACAGACAAAGCTCGAGGGAAAGGAAGAAGAGCTAAGTGCTTTGAAAAAAGAAGTTGAGGAGAAAGAAAAGGAAATTGGCAGAATAAACGAAGAGAAGGAGGATATGTTATTGGAAAATGAGGTGTTGCAAATTGAGAAAGCCTCACTGATTAAAAGAGTGAAGCAATTGGAGGGCATAGTAATGGCACTAACTGAGAAGTATGAGTCGCCAATACCACGTCCAGGTGATGACAACGACTCAACTCCACCTCCCCTACCGCTAGTTTCCCTCCACCAAAATCAAAGGCCCCTCAGGACAAGCCAACTGACAGCAAGCACCCAAAAACACAAAATCTCAAAGTGGAATTCAGGGAACTCAATCACAACCTACCGACTCCACAGCAAGCGGATCTGCAGAACCTCACTCTACCGACCAAGGACATCAGTCACCACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1985 PMD

Protein Analysis

589

Amino Acids

68.6

Weight (kDa)

9.4

Isoelectric Point (pI)

55.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMD PF10536 110 - 336 2.7e-07 Plant mobile domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000100)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr6g0248691
rosa_multiflora Rmu_co8124940.1_g000001 Rmu_co8378695.1_g000001 Rmu_sc0000023.1_g000005 Rmu_sc0000149.1_g000044 Rmu_sc0000195.1_g000019 Rmu_sc0000270.1_g000002 Rmu_sc0000270.1_g000003 Rmu_sc0000433.1_g000016 Rmu_sc0000493.1_g000067 Rmu_sc0000493.1_g000069 Rmu_sc0000493.1_g000070 Rmu_sc0000493.1_g000071 Rmu_sc0000532.1_g000015 Rmu_sc0000532.1_g000017 Rmu_sc0000552.1_g000004 Rmu_sc0000692.1_g000012 Rmu_sc0000733.1_g000017 Rmu_sc0000738.1_g000026 Rmu_sc0000738.1_g000027 Rmu_sc0000738.1_g000028 Rmu_sc0000738.1_g000030 Rmu_sc0000806.1_g000006 Rmu_sc0000863.1_g000026 Rmu_sc0000863.1_g000027 Rmu_sc0000863.1_g000028 Rmu_sc0000863.1_g000029 Rmu_sc0000863.1_g000030 Rmu_sc0000885.1_g000001 Rmu_sc0001168.1_g000020 Rmu_sc0001168.1_g000021 Rmu_sc0001214.1_g000031 Rmu_sc0001214.1_g000032 Rmu_sc0001239.1_g000003 Rmu_sc0001355.1_g000003 Rmu_sc0001373.1_g000008 Rmu_sc0001373.1_g000009 Rmu_sc0001373.1_g000010 Rmu_sc0001587.1_g000003 Rmu_sc0001648.1_g000020 Rmu_sc0001648.1_g000021 Rmu_sc0001648.1_g000022 Rmu_sc0001648.1_g000023 Rmu_sc0001836.1_g000052 Rmu_sc0001836.1_g000053 Rmu_sc0001913.1_g000025 Rmu_sc0001913.1_g000030 Rmu_sc0001938.1_g000005 Rmu_sc0001938.1_g000007 Rmu_sc0001977.1_g000016 Rmu_sc0001977.1_g000017 Rmu_sc0001977.1_g000018 Rmu_sc0001977.1_g000019 Rmu_sc0002080.1_g000031 Rmu_sc0002095.1_g000011 Rmu_sc0002095.1_g000012 Rmu_sc0002202.1_g000002 Rmu_sc0002202.1_g000004 Rmu_sc0002765.1_g000012 Rmu_sc0002955.1_g000003 Rmu_sc0002983.1_g000001 Rmu_sc0002983.1_g000002 Rmu_sc0002983.1_g000005 Rmu_sc0002983.1_g000006 Rmu_sc0003832.1_g000010 Rmu_sc0003880.1_g000041 Rmu_sc0003880.1_g000043 Rmu_sc0003981.1_g000011 Rmu_sc0003981.1_g000016 Rmu_sc0004118.1_g000013 Rmu_sc0004125.1_g000008 Rmu_sc0004155.1_g000007 Rmu_sc0004155.1_g000008 Rmu_sc0004155.1_g000009 Rmu_sc0004465.1_g000004 Rmu_sc0004465.1_g000005 Rmu_sc0004755.1_g000030 Rmu_sc0005014.1_g000009 Rmu_sc0005023.1_g000027 Rmu_sc0005446.1_g000019 Rmu_sc0006273.1_g000001 Rmu_sc0006948.1_g000020 Rmu_sc0007412.1_g000005 Rmu_sc0007996.1_g000001 Rmu_sc0009749.1_g000002 Rmu_sc0011497.1_g000008 Rmu_sc0011497.1_g000009 Rmu_sc0011497.1_g000010 Rmu_sc0012018.1_g000001 Rmu_sc0012347.1_g000004 Rmu_sc0012347.1_g000005 Rmu_sc0013290.1_g000001 Rmu_sc0013576.1_g000009 Rmu_sc0013576.1_g000011 Rmu_sc0014354.1_g000001 Rmu_sc0014482.1_g000006 Rmu_sc0016848.1_g000001 Rmu_sc0018723.1_g000002 Rmu_sc0018723.1_g000003 Rmu_sc0020085.1_g000001 Rmu_sc0022367.1_g000001 Rmu_sc0023661.1_g000001 Rmu_sc0030814.1_g000001 Rmu_sc0034982.1_g000001 Rmu_sc0036901.1_g000001 Rmu_ssc0000064.1_g000016 Rmu_ssc0000170.1_g000012 Rmu_ssc0000170.1_g000014 Rmu_ssc0000189.1_g000048 Rmu_ssc0000443.1_g000005
rosa_roxburghii Rroxscaffold_159G00432950 Rroxscaffold_1G00015760 Rroxscaffold_1G00015770 Rroxscaffold_1G00015780 Rroxscaffold_1G00015950 Rroxscaffold_1G00015980 Rroxscaffold_1G00018050 Rroxscaffold_1G00018060 Rroxscaffold_1G00020330 Rroxscaffold_1G00020340 Rroxscaffold_1G00020350 Rroxscaffold_1G00020370 Rroxscaffold_1G00021720 Rroxscaffold_1G00034800 Rroxscaffold_1G00036050 Rroxscaffold_1G00036060 Rroxscaffold_1G00036070 Rroxscaffold_1G00036160 Rroxscaffold_1G00036170 Rroxscaffold_1G00043200 Rroxscaffold_1G00043210 Rroxscaffold_1G00047700 Rroxscaffold_1G00055120 Rroxscaffold_1G00056300 Rroxscaffold_1G00056320 Rroxscaffold_1G00064030 Rroxscaffold_1G00064050 Rroxscaffold_1G00064110 Rroxscaffold_1G00064130 Rroxscaffold_1G00064140 Rroxscaffold_1G00069580 Rroxscaffold_1G00069590 Rroxscaffold_1G00069600 Rroxscaffold_2G00086000 Rroxscaffold_2G00095520 Rroxscaffold_2G00095530 Rroxscaffold_2G00102950 Rroxscaffold_2G00102960 Rroxscaffold_2G00102980 Rroxscaffold_2G00111430 Rroxscaffold_2G00111440 Rroxscaffold_2G00123850 Rroxscaffold_2G00123860 Rroxscaffold_2G00123870 Rroxscaffold_2G00127600 Rroxscaffold_2G00128430 Rroxscaffold_2G00128440 Rroxscaffold_2G00134550 Rroxscaffold_2G00134560 Rroxscaffold_2G00134570 Rroxscaffold_2G00150440 Rroxscaffold_2G00150450 Rroxscaffold_3G00221670 Rroxscaffold_3G00231550 Rroxscaffold_3G00231560 Rroxscaffold_3G00231580 Rroxscaffold_3G00231590 Rroxscaffold_3G00238200 Rroxscaffold_3G00238210 Rroxscaffold_3G00259430 Rroxscaffold_3G00271580 Rroxscaffold_3G00271590 Rroxscaffold_4G00277030 Rroxscaffold_4G00277050 Rroxscaffold_4G00277060 Rroxscaffold_4G00277070 Rroxscaffold_4G00293250 Rroxscaffold_4G00293260 Rroxscaffold_4G00300140 Rroxscaffold_4G00308740 Rroxscaffold_4G00309540 Rroxscaffold_4G00319500 Rroxscaffold_4G00325410 Rroxscaffold_4G00328420 Rroxscaffold_4G00329630 Rroxscaffold_5G00339100 Rroxscaffold_5G00339110 Rroxscaffold_5G00339130 Rroxscaffold_5G00349460 Rroxscaffold_5G00349470 Rroxscaffold_5G00349480 Rroxscaffold_5G00349490 Rroxscaffold_5G00349800 Rroxscaffold_5G00354000 Rroxscaffold_5G00357420 Rroxscaffold_5G00357430 Rroxscaffold_5G00366730 Rroxscaffold_5G00366740 Rroxscaffold_5G00366750 Rroxscaffold_5G00371380 Rroxscaffold_5G00371390 Rroxscaffold_5G00371410 Rroxscaffold_6G00390390 Rroxscaffold_6G00390400 Rroxscaffold_6G00390410 Rroxscaffold_6G00391800 Rroxscaffold_6G00391810 Rroxscaffold_6G00399200 Rroxscaffold_6G00403500 Rroxscaffold_6G00403510 Rroxscaffold_6G00403520 Rroxscaffold_6G00407230 Rroxscaffold_6G00411100 Rroxscaffold_6G00411700 Rroxscaffold_6G00415300 Rroxscaffold_6G00415310 Rroxscaffold_6G00422180 Rroxscaffold_6G00422200 Rroxscaffold_6G00422210 Rroxscaffold_7G00157710 Rroxscaffold_7G00157720 Rroxscaffold_7G00157740 Rroxscaffold_7G00194140 Rroxscaffold_7G00196750 Rroxscaffold_7G00197960 Rroxscaffold_7G00208750 Rroxscaffold_7G00208760 Rroxscaffold_7G00208780 Rroxscaffold_7G00213740 Rroxscaffold_7G00215180 Rroxscaffold_7G00215190 Rroxscaffold_7G00215200
rosa_rugosa Rorug03G0270600 Rorug05G0169200
rosa_samantha Rh1AG048500 Rh1AG091500 Rh1AG190900 Rh2BG351700 Rh2BG494300 Rh2BG539800 Rh3BG209100 Rh4CG136600 Rh4CG194800 Rh4CG381100 Rh5BG080500 Rh5BG083000 Rh5BG083100 Rh5BG124000 Rh5BG126200 Rh5BG131000 Rh5BG158900 Rh5BG284300 Rh5BG310800 Rh5BG437700 Rh6AG114700 Rh6AG126300 Rh6AG202500 Rh7CG009000 Rh7CG320700 Rh7CG355200 Rh7CG514200
rosa_wichuraiana Rw5G018600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 818
AccB7I CCANNNNNTGG 3 cut(s) 689, 823, 890
AciI CCGC 3 cut(s) 881, 1592, 1720
AclWI GGATC 3 cut(s) 428, 439, 1730
AcsI RAATTY 2 cut(s) 413, 1678
AcuI CTGAAG 3 cut(s) 129, 159, 1148
AfaI GTAC 2 cut(s) 188, 851
AfiI CCNNNNNNNGG 7 cut(s) 367, 464, 689, 823, 868, 890, 1556
AflIII ACRYGT 1 cut(s) 178
AgsI TTSAA 9 cut(s) 47, 116, 214, 441, 531, 658, 968, 1088, 1378
AjiI CACGTC 1 cut(s) 1553
AjnI CCWGG 2 cut(s) 172, 1555
AjuI GAANNNNNNNTTGG 8 cut(s) 88, 120, 688, 720, 1196, 1228, 1392, 1424
AluBI AGCT 5 cut(s) 569, 756, 1183, 1345, 1366
AluI AGCT 5 cut(s) 569, 756, 1183, 1345, 1366
Alw21I GWGCWC 1 cut(s) 197
Alw26I GTCTC 3 cut(s) 1112, 1148, 1289
Alw44I GTGCAC 1 cut(s) 193
AlwI GGATC 3 cut(s) 428, 439, 1730
Ama87I CYCGRG 1 cut(s) 1346
AoxI GGCC 2 cut(s) 369, 1619
ApaLI GTGCAC 1 cut(s) 193
ApeKI GCWGC 1 cut(s) 143
ApoI RAATTY 2 cut(s) 413, 1678
AseI ATTAAT 1 cut(s) 647
Asp700I GAANNNNTTC 2 cut(s) 413, 662
AspA2I CCTAGG 1 cut(s) 448
AspLEI GCGC 1 cut(s) 583
AspS9I GGNCC 2 cut(s) 475, 1620
AsuHPI GGTGA 9 cut(s) 25, 84, 267, 479, 856, 1123, 1280, 1571, 1753
AvaI CYCGRG 1 cut(s) 1346
AvaII GGWCC 1 cut(s) 475
AvrII CCTAGG 1 cut(s) 448
AxyI CCTNAGG 1 cut(s) 1625
BaeGI GKGCMC 1 cut(s) 197
Bbv12I GWGCWC 1 cut(s) 197
BbvI GCAGC 1 cut(s) 155
BccI CCATC 3 cut(s) 38, 1061, 1285
BceAI ACGGC 1 cut(s) 542
BciT130I CCWGG 2 cut(s) 174, 1557
BcoDI GTCTC 3 cut(s) 1112, 1148, 1289
BfaI CTAG 3 cut(s) 449, 1092, 1595
BfmI CTRYAG 2 cut(s) 365, 1726
BfuAI ACCTGC 1 cut(s) 818
BisI GCNGC 2 cut(s) 144, 881
BlnI CCTAGG 1 cut(s) 448
BlsI GCNGC 2 cut(s) 145, 882
Bme1390I CCNGG 2 cut(s) 174, 1557
Bme18I GGWCC 1 cut(s) 475
BmeT110I CYCGRG 1 cut(s) 1346
BmgBI CACGTC 1 cut(s) 1553
BmgT120I GGNCC 2 cut(s) 475, 1620
BmiI GGNNCC 2 cut(s) 477, 1622
BmrFI CCNGG 2 cut(s) 174, 1557
BmsI GCATC 5 cut(s) 286, 568, 582, 997, 1133
BoxI GACNNNNGTC 1 cut(s) 1757
BplI GAGNNNNNCTC 2 cut(s) 1460, 1492
BpmI CTGGAG 1 cut(s) 711
Bpu10I CCTNAGC 1 cut(s) 266
BsaJI CCNNGG 5 cut(s) 304, 448, 558, 973, 1748
BsaXI ACNNNNNCTCC 4 cut(s) 1424, 1454, 1567, 1597
Bsc4I CCNNNNNNNGG 7 cut(s) 367, 464, 689, 823, 868, 890, 1556
Bse1I ACTGG 3 cut(s) 857, 1098, 1251
Bse21I CCTNAGG 1 cut(s) 1625
BseBI CCWGG 2 cut(s) 174, 1557
BseDI CCNNGG 5 cut(s) 304, 448, 558, 973, 1748
BseLI CCNNNNNNNGG 7 cut(s) 367, 464, 689, 823, 868, 890, 1556
BseMII CTCAG 6 cut(s) 256, 280, 480, 1017, 1518, 1639
BseNI ACTGG 3 cut(s) 857, 1098, 1251
BseRI GAGGAG 3 cut(s) 335, 350, 1406
BseSI GKGCMC 1 cut(s) 197
BseXI GCAGC 1 cut(s) 155
BseYI CCCAGC 1 cut(s) 756
BsgI GTGCAG 1 cut(s) 203
BshFI GGCC 2 cut(s) 371, 1621
BsiHKAI GWGCWC 1 cut(s) 197
BsiHKCI CYCGRG 1 cut(s) 1346
BslFI GGGAC 2 cut(s) 461, 722
BslI CCNNNNNNNGG 7 cut(s) 367, 464, 689, 823, 868, 890, 1556
BsmAI GTCTC 3 cut(s) 1112, 1148, 1289
BsmFI GGGAC 2 cut(s) 461, 722
BsmI GAATGC 2 cut(s) 299, 459
BsnI GGCC 2 cut(s) 371, 1621
BsoBI CYCGRG 1 cut(s) 1346
Bsp1286I GDGCHC 1 cut(s) 197
Bsp143I GATC 3 cut(s) 420, 444, 1722
Bsp19I CCATGG 2 cut(s) 304, 973
BspACI CCGC 3 cut(s) 881, 1592, 1720
BspANI GGCC 2 cut(s) 371, 1621
BspCNI CTCAG 6 cut(s) 255, 279, 481, 1018, 1519, 1638
BspLI GGNNCC 2 cut(s) 477, 1622
BspMAI CTGCAG 1 cut(s) 1730
BspMI ACCTGC 1 cut(s) 818
BspPI GGATC 3 cut(s) 428, 439, 1730
BspQI GCTCTTC 2 cut(s) 1173, 1356
BsrI ACTGG 3 cut(s) 857, 1098, 1251
BssECI CCNNGG 5 cut(s) 304, 448, 558, 973, 1748
BssMI GATC 3 cut(s) 420, 444, 1722
BssT1I CCWWGG 4 cut(s) 304, 448, 973, 1748
Bst2UI CCWGG 2 cut(s) 174, 1557
Bst6I CTCTTC 8 cut(s) 33, 398, 723, 889, 1173, 1314, 1356, 1419
BstC8I GCNNGC 2 cut(s) 1648, 1718
BstDEI CTNAG 8 cut(s) 242, 266, 489, 1026, 1184, 1367, 1527, 1625
BstDSI CCRYGG 3 cut(s) 304, 558, 973
BstENI CCTNNNNNAGG 1 cut(s) 365
BstHHI GCGC 1 cut(s) 583
BstKTI GATC 3 cut(s) 423, 447, 1725
BstMAI GTCTC 3 cut(s) 1112, 1148, 1289
BstMBI GATC 3 cut(s) 420, 444, 1722
BstMWI GCNNNNNNNGC 1 cut(s) 580
BstNI CCWGG 2 cut(s) 174, 1557
BstNSI RCATGY 1 cut(s) 182
BstPAI GACNNNNGTC 1 cut(s) 1757
BstSCI CCNGG 2 cut(s) 172, 1555
BstSFI CTRYAG 2 cut(s) 365, 1726
BstSLI GKGCMC 1 cut(s) 197
BstV1I GCAGC 1 cut(s) 155
BstX2I RGATCY 3 cut(s) 420, 444, 1722
BstYI RGATCY 3 cut(s) 420, 444, 1722
Bsu36I CCTNAGG 1 cut(s) 1625
BsuRI GGCC 2 cut(s) 371, 1621
BtgI CCRYGG 3 cut(s) 304, 558, 973
BtrI CACGTC 1 cut(s) 1553
BtsIMutI CAGTG 3 cut(s) 250, 1105, 1478
BveI ACCTGC 1 cut(s) 818
Cac8I GCNNGC 2 cut(s) 1648, 1718
CfoI GCGC 1 cut(s) 583
Cfr13I GGNCC 2 cut(s) 475, 1620
Csp6I GTAC 2 cut(s) 187, 850
CviAII CATG 5 cut(s) 179, 305, 380, 823, 974
CviQI GTAC 2 cut(s) 187, 850
DdeI CTNAG 8 cut(s) 242, 266, 489, 1026, 1184, 1367, 1527, 1625
DpnI GATC 3 cut(s) 422, 446, 1724
DpnII GATC 3 cut(s) 420, 444, 1722
Eam1104I CTCTTC 8 cut(s) 33, 398, 723, 889, 1173, 1314, 1356, 1419
EarI CTCTTC 8 cut(s) 33, 398, 723, 889, 1173, 1314, 1356, 1419
Eco130I CCWWGG 4 cut(s) 304, 448, 973, 1748
Eco147I AGGCCT 1 cut(s) 371
Eco47I GGWCC 1 cut(s) 475
Eco57I CTGAAG 3 cut(s) 129, 159, 1148
Eco81I CCTNAGG 1 cut(s) 1625
Eco88I CYCGRG 1 cut(s) 1346
EcoNI CCTNNNNNAGG 1 cut(s) 365
EcoO109I RGGNCCY 1 cut(s) 1620
EcoRI GAATTC 1 cut(s) 1678
EcoRII CCWGG 2 cut(s) 172, 1555
EcoT14I CCWWGG 4 cut(s) 304, 448, 973, 1748
EcoT22I ATGCAT 1 cut(s) 301
ErhI CCWWGG 4 cut(s) 304, 448, 973, 1748
FaeI CATG 5 cut(s) 182, 308, 383, 826, 977
FaqI GGGAC 2 cut(s) 461, 722
FatI CATG 5 cut(s) 178, 304, 379, 822, 973
Fnu4HI GCNGC 2 cut(s) 144, 881
Fsp4HI GCNGC 2 cut(s) 144, 881
FspBI CTAG 3 cut(s) 449, 1092, 1595
GlaI GCGC 1 cut(s) 582
GluI GCNGC 2 cut(s) 144, 881
GsaI CCCAGC 1 cut(s) 760
GsuI CTGGAG 1 cut(s) 711
HaeIII GGCC 2 cut(s) 371, 1621
HhaI GCGC 1 cut(s) 583
Hin1II CATG 5 cut(s) 182, 308, 383, 826, 977
Hin6I GCGC 1 cut(s) 581
HinP1I GCGC 1 cut(s) 581
HinfI GANTC 9 cut(s) 104, 238, 720, 812, 1022, 1028, 1538, 1571, 1707
HphI GGTGA 9 cut(s) 25, 84, 267, 479, 856, 1123, 1280, 1571, 1753
Hpy166II GTNNAC 1 cut(s) 195
Hpy188I TCNGA 6 cut(s) 109, 343, 490, 508, 1027, 1167
Hpy188III TCNNGA 8 cut(s) 116, 211, 418, 424, 655, 690, 891, 1627
Hpy8I GTNNAC 1 cut(s) 195
HpyAV CCTTC 5 cut(s) 94, 601, 615, 1108, 1423
HpyCH4IV ACGT 1 cut(s) 1552
HpyF10VI GCNNNNNNNGC 1 cut(s) 580
HpyF3I CTNAG 8 cut(s) 242, 266, 489, 1026, 1184, 1367, 1527, 1625
HpySE526I ACGT 1 cut(s) 1552
Hsp92II CATG 5 cut(s) 182, 308, 383, 826, 977
HspAI GCGC 1 cut(s) 581
Kzo9I GATC 3 cut(s) 420, 444, 1722
LguI GCTCTTC 2 cut(s) 1173, 1356
Lsp1109I GCAGC 1 cut(s) 155
LweI GCATC 5 cut(s) 286, 568, 582, 997, 1133
MaeI CTAG 3 cut(s) 449, 1092, 1595
MaeII ACGT 1 cut(s) 1552
MaeIII GTNAC 3 cut(s) 273, 1268, 1759
MalI GATC 3 cut(s) 422, 446, 1724
MboI GATC 3 cut(s) 420, 444, 1722
MfeI CAATTG 1 cut(s) 1499
MflI RGATCY 3 cut(s) 420, 444, 1722
MhlI GDGCHC 1 cut(s) 197
MlyI GAGTC 5 cut(s) 729, 1037, 1547, 1565, 1701
MmeI TCCRAC 1 cut(s) 531
Mph1103I ATGCAT 1 cut(s) 301
MroXI GAANNNNTTC 2 cut(s) 413, 662
MslI CAYNNNNRTG 2 cut(s) 384, 1514
MspR9I CCNGG 2 cut(s) 174, 1557
MunI CAATTG 1 cut(s) 1499
Mva1269I GAATGC 2 cut(s) 299, 459
MvaI CCWGG 2 cut(s) 174, 1557
MwoI GCNNNNNNNGC 1 cut(s) 580
NcoI CCATGG 2 cut(s) 304, 973
NdeII GATC 3 cut(s) 420, 444, 1722
NlaIII CATG 5 cut(s) 182, 308, 383, 826, 977
NlaIV GGNNCC 2 cut(s) 477, 1622
NmuCI GTSAC 3 cut(s) 273, 1268, 1759
NsiI ATGCAT 1 cut(s) 301
NspI RCATGY 1 cut(s) 182
PaeR7I CTCGAG 1 cut(s) 1346
PceI AGGCCT 1 cut(s) 371
PciI ACATGT 1 cut(s) 178
PciSI GCTCTTC 2 cut(s) 1173, 1356
PctI GAATGC 2 cut(s) 299, 459
PdmI GAANNNNTTC 2 cut(s) 413, 662
PfeI GAWTC 4 cut(s) 104, 238, 812, 1022
PflMI CCANNNNNTGG 3 cut(s) 689, 823, 890
PkrI GCNGC 2 cut(s) 145, 882
PleI GAGTC 5 cut(s) 728, 1036, 1546, 1565, 1701
PpsI GAGTC 5 cut(s) 728, 1036, 1546, 1565, 1701
PscI ACATGT 1 cut(s) 178
PshAI GACNNNNGTC 1 cut(s) 1757
PshBI ATTAAT 1 cut(s) 647
Psp6I CCWGG 2 cut(s) 172, 1555
PspFI CCCAGC 1 cut(s) 756
PspGI CCWGG 2 cut(s) 172, 1555
PspN4I GGNNCC 2 cut(s) 477, 1622
PspPI GGNCC 2 cut(s) 475, 1620
PspXI VCTCGAGB 1 cut(s) 1346
PstI CTGCAG 1 cut(s) 1730
PsuI RGATCY 3 cut(s) 420, 444, 1722
RsaI GTAC 2 cut(s) 188, 851
RsaNI GTAC 2 cut(s) 187, 850
RseI CAYNNNNRTG 2 cut(s) 384, 1514
SapI GCTCTTC 2 cut(s) 1173, 1356
SatI GCNGC 2 cut(s) 144, 881
Sau3AI GATC 3 cut(s) 420, 444, 1722
Sau96I GGNCC 2 cut(s) 475, 1620
SchI GAGTC 5 cut(s) 729, 1037, 1547, 1565, 1701
ScrFI CCNGG 2 cut(s) 174, 1557
SduI GDGCHC 1 cut(s) 197
SfaNI GCATC 5 cut(s) 286, 568, 582, 997, 1133
SfcI CTRYAG 2 cut(s) 365, 1726
Sfr274I CTCGAG 1 cut(s) 1346
SinI GGWCC 1 cut(s) 475
SlaI CTCGAG 1 cut(s) 1346
SmiMI CAYNNNNRTG 2 cut(s) 384, 1514
SmlI CTYRAG 1 cut(s) 1346
SmoI CTYRAG 1 cut(s) 1346
SseBI AGGCCT 1 cut(s) 371
SsiI CCGC 3 cut(s) 881, 1592, 1720
SspMI CTAG 3 cut(s) 449, 1092, 1595
StuI AGGCCT 1 cut(s) 371
StyD4I CCNGG 2 cut(s) 172, 1555
StyI CCWWGG 4 cut(s) 304, 448, 973, 1748
TaiI ACGT 1 cut(s) 1555
TaqI TCGA 4 cut(s) 294, 425, 1127, 1347
TatI WGTACW 2 cut(s) 186, 849
TauI GCSGC 1 cut(s) 883
TfiI GAWTC 4 cut(s) 104, 238, 812, 1022
TscAI CASTG 3 cut(s) 250, 1105, 1485
TseFI GTSAC 3 cut(s) 273, 1268, 1759
TseI GCWGC 1 cut(s) 143
Tsp45I GTSAC 3 cut(s) 273, 1268, 1759
TspDTI ATGAA 6 cut(s) 17, 340, 396, 655, 1332, 1344
TspGWI ACGGA 1 cut(s) 927
TspRI CASTG 3 cut(s) 250, 1105, 1485
Van91I CCANNNNNTGG 3 cut(s) 689, 823, 890
VneI GTGCAC 1 cut(s) 193
VpaK11BI GGWCC 1 cut(s) 475
VspI ATTAAT 1 cut(s) 647
XagI CCTNNNNNAGG 1 cut(s) 365
XapI RAATTY 2 cut(s) 413, 1678
XceI RCATGY 1 cut(s) 182
XcmI CCANNNNNNNNNTGG 1 cut(s) 1105
XhoI CTCGAG 1 cut(s) 1346
XmaJI CCTAGG 1 cut(s) 448
XmnI GAANNNNTTC 2 cut(s) 413, 662
XspI CTAG 3 cut(s) 449, 1092, 1595
Zsp2I ATGCAT 1 cut(s) 301
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.