Rmu_sc0012347.1_g000005

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0012347.1
OG0000100
Physical Location & Seq
Forward (+)
29999 .. 33944
3946 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0012347.1_g000005.1.cds

Sequence Viewer

Length: 1473 bp
atgcaccttacagagcaacattccggtgaaacgatatcatcaataggtctttactcttacgttgtgagattaaagaataggagaagaacacagaaaaaggacaacatttactggtggggagatgtgaaagcaaaaagacagaagaaagcaaaggagattgaagagagattgaaagatgctgaaaagagagaaaaagaaaaggagaggacaccaagaggagagtccagaaatactggcaaaatgcaccatcagggtaataatttaattaagttaaatttctattttaaacttattgtcactagccaagtcactgtccatgtaactgacaaagtaactgtccaagtcactgtccatggccaagtcactgtccatgtatatggcgaagtcactgaccatgtgaagtcactggccaagtcactagtatacttctgggatggaagacggtacggagcacaggtttcaagacatgatttaaaagacataatcatggatgaaccgatagcaagcaattgcatcgaatgttatggaattctattgactgatcagttgttggagaaagaatcacaaggcttggatgttccaacttttatgaatcccttatgctgggtcgaaatggtagagctttggatgactgcagtaaaagaacaagcagatgacatggtagaacaaggttgtaggatgaaatttgatgaaaagaacagttcagaagaacaactgaaaatgatagaaaaaactgaagatgaagaagaatcaagtgaagatgaggaagaaacaactaaagttgaagaagaatctaatgaagaacaagtccggggtaagaagacgaagaaggataacaagaagaaaagaagaaacagggaagaaactgaagatgaagaagaagaatctgatggagaagaagttcatgccaagaagaagaagaaaatggataaaaggaagacaaaaaaagagagcacaaagaagaaggaagaaactgacgaggaagaacatacaaaggatgatgtagaggaaaaagtcccagggaaaaggaaaagatatgtaaaagagggttatgtgcaatatcgctgcacaatgattgcttttctgaaaacaattgcagaaaacaaaaataacctgactgaagggactttagagctgctgcagaaaactccctttgcaacgctgatagatgcattccatggaggttcaattaaagaaaaggatgcaaagaaatcagatgatttaatcacacttctgctacaagcatacgacagcgacacagacctttttgtgtttggaaacaggaaattcagaatgtcaacaagtgatatatcaatgattttaggagtgccgggatcagggttatcagtaccaaagaccaaagaaggggcatacaaatctgagttcgtgactaaatactttgacaaaaagaagaggattaacaaggcggctgcagaggaagctttgaagaaggcattagcagaaactccataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1985 PMD

Protein Analysis

490

Amino Acids

56.79

Weight (kDa)

6.69

Isoelectric Point (pI)

52.03

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000100)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr6g0248691
rosa_multiflora Rmu_co8124940.1_g000001 Rmu_co8378695.1_g000001 Rmu_sc0000023.1_g000005 Rmu_sc0000149.1_g000044 Rmu_sc0000195.1_g000019 Rmu_sc0000270.1_g000002 Rmu_sc0000270.1_g000003 Rmu_sc0000433.1_g000016 Rmu_sc0000493.1_g000067 Rmu_sc0000493.1_g000069 Rmu_sc0000493.1_g000070 Rmu_sc0000493.1_g000071 Rmu_sc0000532.1_g000015 Rmu_sc0000532.1_g000017 Rmu_sc0000552.1_g000004 Rmu_sc0000692.1_g000012 Rmu_sc0000733.1_g000017 Rmu_sc0000738.1_g000026 Rmu_sc0000738.1_g000027 Rmu_sc0000738.1_g000028 Rmu_sc0000738.1_g000030 Rmu_sc0000806.1_g000006 Rmu_sc0000863.1_g000026 Rmu_sc0000863.1_g000027 Rmu_sc0000863.1_g000028 Rmu_sc0000863.1_g000029 Rmu_sc0000863.1_g000030 Rmu_sc0000885.1_g000001 Rmu_sc0001168.1_g000020 Rmu_sc0001168.1_g000021 Rmu_sc0001214.1_g000031 Rmu_sc0001214.1_g000032 Rmu_sc0001239.1_g000003 Rmu_sc0001355.1_g000003 Rmu_sc0001373.1_g000008 Rmu_sc0001373.1_g000009 Rmu_sc0001373.1_g000010 Rmu_sc0001587.1_g000003 Rmu_sc0001648.1_g000020 Rmu_sc0001648.1_g000021 Rmu_sc0001648.1_g000022 Rmu_sc0001648.1_g000023 Rmu_sc0001836.1_g000052 Rmu_sc0001836.1_g000053 Rmu_sc0001913.1_g000025 Rmu_sc0001913.1_g000030 Rmu_sc0001938.1_g000005 Rmu_sc0001938.1_g000007 Rmu_sc0001977.1_g000016 Rmu_sc0001977.1_g000017 Rmu_sc0001977.1_g000018 Rmu_sc0001977.1_g000019 Rmu_sc0002080.1_g000031 Rmu_sc0002095.1_g000011 Rmu_sc0002095.1_g000012 Rmu_sc0002202.1_g000002 Rmu_sc0002202.1_g000004 Rmu_sc0002765.1_g000012 Rmu_sc0002955.1_g000003 Rmu_sc0002983.1_g000001 Rmu_sc0002983.1_g000002 Rmu_sc0002983.1_g000005 Rmu_sc0002983.1_g000006 Rmu_sc0003832.1_g000010 Rmu_sc0003880.1_g000041 Rmu_sc0003880.1_g000043 Rmu_sc0003981.1_g000011 Rmu_sc0003981.1_g000016 Rmu_sc0004118.1_g000013 Rmu_sc0004125.1_g000008 Rmu_sc0004155.1_g000007 Rmu_sc0004155.1_g000008 Rmu_sc0004155.1_g000009 Rmu_sc0004465.1_g000004 Rmu_sc0004465.1_g000005 Rmu_sc0004755.1_g000030 Rmu_sc0005014.1_g000009 Rmu_sc0005023.1_g000027 Rmu_sc0005446.1_g000019 Rmu_sc0006273.1_g000001 Rmu_sc0006948.1_g000020 Rmu_sc0007412.1_g000005 Rmu_sc0007996.1_g000001 Rmu_sc0009749.1_g000002 Rmu_sc0011497.1_g000008 Rmu_sc0011497.1_g000009 Rmu_sc0011497.1_g000010 Rmu_sc0012018.1_g000001 Rmu_sc0012347.1_g000004 Rmu_sc0012347.1_g000005 Rmu_sc0013290.1_g000001 Rmu_sc0013576.1_g000009 Rmu_sc0013576.1_g000011 Rmu_sc0014354.1_g000001 Rmu_sc0014482.1_g000006 Rmu_sc0016848.1_g000001 Rmu_sc0018723.1_g000002 Rmu_sc0018723.1_g000003 Rmu_sc0020085.1_g000001 Rmu_sc0022367.1_g000001 Rmu_sc0023661.1_g000001 Rmu_sc0030814.1_g000001 Rmu_sc0034982.1_g000001 Rmu_sc0036901.1_g000001 Rmu_ssc0000064.1_g000016 Rmu_ssc0000170.1_g000012 Rmu_ssc0000170.1_g000014 Rmu_ssc0000189.1_g000048 Rmu_ssc0000443.1_g000005
rosa_roxburghii Rroxscaffold_159G00432950 Rroxscaffold_1G00015760 Rroxscaffold_1G00015770 Rroxscaffold_1G00015780 Rroxscaffold_1G00015950 Rroxscaffold_1G00015980 Rroxscaffold_1G00018050 Rroxscaffold_1G00018060 Rroxscaffold_1G00020330 Rroxscaffold_1G00020340 Rroxscaffold_1G00020350 Rroxscaffold_1G00020370 Rroxscaffold_1G00021720 Rroxscaffold_1G00034800 Rroxscaffold_1G00036050 Rroxscaffold_1G00036060 Rroxscaffold_1G00036070 Rroxscaffold_1G00036160 Rroxscaffold_1G00036170 Rroxscaffold_1G00043200 Rroxscaffold_1G00043210 Rroxscaffold_1G00047700 Rroxscaffold_1G00055120 Rroxscaffold_1G00056300 Rroxscaffold_1G00056320 Rroxscaffold_1G00064030 Rroxscaffold_1G00064050 Rroxscaffold_1G00064110 Rroxscaffold_1G00064130 Rroxscaffold_1G00064140 Rroxscaffold_1G00069580 Rroxscaffold_1G00069590 Rroxscaffold_1G00069600 Rroxscaffold_2G00086000 Rroxscaffold_2G00095520 Rroxscaffold_2G00095530 Rroxscaffold_2G00102950 Rroxscaffold_2G00102960 Rroxscaffold_2G00102980 Rroxscaffold_2G00111430 Rroxscaffold_2G00111440 Rroxscaffold_2G00123850 Rroxscaffold_2G00123860 Rroxscaffold_2G00123870 Rroxscaffold_2G00127600 Rroxscaffold_2G00128430 Rroxscaffold_2G00128440 Rroxscaffold_2G00134550 Rroxscaffold_2G00134560 Rroxscaffold_2G00134570 Rroxscaffold_2G00150440 Rroxscaffold_2G00150450 Rroxscaffold_3G00221670 Rroxscaffold_3G00231550 Rroxscaffold_3G00231560 Rroxscaffold_3G00231580 Rroxscaffold_3G00231590 Rroxscaffold_3G00238200 Rroxscaffold_3G00238210 Rroxscaffold_3G00259430 Rroxscaffold_3G00271580 Rroxscaffold_3G00271590 Rroxscaffold_4G00277030 Rroxscaffold_4G00277050 Rroxscaffold_4G00277060 Rroxscaffold_4G00277070 Rroxscaffold_4G00293250 Rroxscaffold_4G00293260 Rroxscaffold_4G00300140 Rroxscaffold_4G00308740 Rroxscaffold_4G00309540 Rroxscaffold_4G00319500 Rroxscaffold_4G00325410 Rroxscaffold_4G00328420 Rroxscaffold_4G00329630 Rroxscaffold_5G00339100 Rroxscaffold_5G00339110 Rroxscaffold_5G00339130 Rroxscaffold_5G00349460 Rroxscaffold_5G00349470 Rroxscaffold_5G00349480 Rroxscaffold_5G00349490 Rroxscaffold_5G00349800 Rroxscaffold_5G00354000 Rroxscaffold_5G00357420 Rroxscaffold_5G00357430 Rroxscaffold_5G00366730 Rroxscaffold_5G00366740 Rroxscaffold_5G00366750 Rroxscaffold_5G00371380 Rroxscaffold_5G00371390 Rroxscaffold_5G00371410 Rroxscaffold_6G00390390 Rroxscaffold_6G00390400 Rroxscaffold_6G00390410 Rroxscaffold_6G00391800 Rroxscaffold_6G00391810 Rroxscaffold_6G00399200 Rroxscaffold_6G00403500 Rroxscaffold_6G00403510 Rroxscaffold_6G00403520 Rroxscaffold_6G00407230 Rroxscaffold_6G00411100 Rroxscaffold_6G00411700 Rroxscaffold_6G00415300 Rroxscaffold_6G00415310 Rroxscaffold_6G00422180 Rroxscaffold_6G00422200 Rroxscaffold_6G00422210 Rroxscaffold_7G00157710 Rroxscaffold_7G00157720 Rroxscaffold_7G00157740 Rroxscaffold_7G00194140 Rroxscaffold_7G00196750 Rroxscaffold_7G00197960 Rroxscaffold_7G00208750 Rroxscaffold_7G00208760 Rroxscaffold_7G00208780 Rroxscaffold_7G00213740 Rroxscaffold_7G00215180 Rroxscaffold_7G00215190 Rroxscaffold_7G00215200
rosa_rugosa Rorug03G0270600 Rorug05G0169200
rosa_samantha Rh1AG048500 Rh1AG091500 Rh1AG190900 Rh2BG351700 Rh2BG494300 Rh2BG539800 Rh3BG209100 Rh4CG136600 Rh4CG194800 Rh4CG381100 Rh5BG080500 Rh5BG083000 Rh5BG083100 Rh5BG124000 Rh5BG126200 Rh5BG131000 Rh5BG158900 Rh5BG284300 Rh5BG310800 Rh5BG437700 Rh6AG114700 Rh6AG126300 Rh6AG202500 Rh7CG009000 Rh7CG320700 Rh7CG355200 Rh7CG514200
rosa_wichuraiana Rw5G018600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 423
AciI CCGC 1 cut(s) 1427
AclWI GGATC 1 cut(s) 1342
AcoI YGGCCR 2 cut(s) 355, 408
AcsI RAATTY 4 cut(s) 274, 528, 683, 1286
AcuI CTGAAG 3 cut(s) 756, 888, 1140
AfaI GTAC 2 cut(s) 446, 1350
AfiI CCNNNNNNNGG 3 cut(s) 603, 1337, 1365
AgsI TTSAA 6 cut(s) 161, 172, 462, 785, 1188, 1447
AhlI ACTAGT 1 cut(s) 418
AjnI CCWGG 1 cut(s) 1018
AloI GAACNNNNNNTCC 2 cut(s) 885, 917
AluBI AGCT 3 cut(s) 622, 1135, 1442
AluI AGCT 3 cut(s) 622, 1135, 1442
Alw21I GWGCWC 2 cut(s) 454, 956
AlwI GGATC 1 cut(s) 1342
AoxI GGCC 2 cut(s) 355, 408
ApeKI GCWGC 4 cut(s) 1065, 1135, 1138, 1430
ApoI RAATTY 4 cut(s) 274, 528, 683, 1286
ArsI GACNNNNNNTTYG 2 cut(s) 321, 353
Asp700I GAANNNNTTC 1 cut(s) 900
AsuC2I CCSGG 2 cut(s) 812, 1332
AsuHPI GGTGA 1 cut(s) 38
BalI TGGCCA 2 cut(s) 357, 410
BbsI GAAGAC 3 cut(s) 445, 827, 944
Bbv12I GWGCWC 2 cut(s) 454, 956
BbvI GCAGC 4 cut(s) 1052, 1122, 1125, 1417
BccI CCATC 3 cut(s) 255, 428, 884
BcgI CGANNNNNNTGC 2 cut(s) 496, 530
BciT130I CCWGG 1 cut(s) 1020
BclI TGATCA 1 cut(s) 541
BcnI CCSGG 2 cut(s) 812, 1332
BcuI ACTAGT 1 cut(s) 418
BfaI CTAG 2 cut(s) 300, 419
BfmI CTRYAG 3 cut(s) 633, 1139, 1431
BisI GCNGC 5 cut(s) 1066, 1136, 1139, 1428, 1431
BlsI GCNGC 5 cut(s) 1067, 1137, 1140, 1429, 1432
Bme1390I CCNGG 3 cut(s) 812, 1020, 1332
BmrFI CCNGG 3 cut(s) 812, 1020, 1332
BmsI GCATC 4 cut(s) 166, 522, 1159, 1192
BpiI GAAGAC 3 cut(s) 445, 827, 944
BpuMI CCSGG 2 cut(s) 812, 1332
BsaJI CCNNGG 5 cut(s) 352, 811, 1018, 1019, 1177
BsaWI WCCGGW 1 cut(s) 23
BsaXI ACNNNNNCTCC 4 cut(s) 441, 471, 885, 915
Bsc4I CCNNNNNNNGG 3 cut(s) 603, 1337, 1365
Bse1I ACTGG 3 cut(s) 116, 238, 411
BseBI CCWGG 1 cut(s) 1020
BseDI CCNNGG 5 cut(s) 352, 811, 1018, 1019, 1177
BseGI GGATG 7 cut(s) 439, 496, 580, 633, 684, 1003, 1207
BseLI CCNNNNNNNGG 3 cut(s) 603, 1337, 1365
BseMII CTCAG 1 cut(s) 1371
BseNI ACTGG 3 cut(s) 116, 238, 411
BseRI GAGGAG 1 cut(s) 231
BseXI GCAGC 4 cut(s) 1052, 1122, 1125, 1417
BseYI CCCAGC 1 cut(s) 603
BsgI GTGCAG 1 cut(s) 1051
BshFI GGCC 2 cut(s) 357, 410
BsiHKAI GWGCWC 2 cut(s) 454, 956
BsiSI CCGG 3 cut(s) 24, 811, 1331
BslFI GGGAC 2 cut(s) 1001, 1138
BslI CCNNNNNNNGG 3 cut(s) 603, 1337, 1365
BsmFI GGGAC 2 cut(s) 1001, 1138
BsmI GAATGC 1 cut(s) 1172
BsnI GGCC 2 cut(s) 357, 410
Bsp1286I GDGCHC 2 cut(s) 454, 956
Bsp143I GATC 2 cut(s) 541, 1334
Bsp19I CCATGG 2 cut(s) 352, 1177
BspACI CCGC 1 cut(s) 1427
BspANI GGCC 2 cut(s) 357, 410
BspCNI CTCAG 1 cut(s) 1372
BspMAI CTGCAG 3 cut(s) 637, 1143, 1435
BspPI GGATC 1 cut(s) 1342
BsrI ACTGG 3 cut(s) 116, 238, 411
BssECI CCNNGG 5 cut(s) 352, 811, 1018, 1019, 1177
BssMI GATC 2 cut(s) 541, 1334
BssNAI GTATAC 1 cut(s) 424
BssT1I CCWWGG 2 cut(s) 352, 1177
Bst1107I GTATAC 1 cut(s) 424
Bst2UI CCWGG 1 cut(s) 1020
Bst4CI ACNGT 6 cut(s) 313, 337, 349, 367, 444, 701
Bst6I CTCTTC 2 cut(s) 156, 1406
BstC8I GCNNGC 1 cut(s) 505
BstDEI CTNAG 1 cut(s) 1380
BstDSI CCRYGG 2 cut(s) 352, 1177
BstF5I GGATG 7 cut(s) 439, 496, 580, 633, 684, 1003, 1207
BstKTI GATC 2 cut(s) 544, 1337
BstMBI GATC 2 cut(s) 541, 1334
BstMWI GCNNNNNNNGC 1 cut(s) 1439
BstNI CCWGG 1 cut(s) 1020
BstSCI CCNGG 3 cut(s) 810, 1018, 1330
BstSFI CTRYAG 3 cut(s) 633, 1139, 1431
BstV1I GCAGC 4 cut(s) 1052, 1122, 1125, 1417
BstV2I GAAGAC 3 cut(s) 445, 827, 944
BstXI CCANNNNNNTGG 1 cut(s) 377
BstZ17I GTATAC 1 cut(s) 424
BsuRI GGCC 2 cut(s) 357, 410
BtgI CCRYGG 2 cut(s) 352, 1177
BtsCI GGATG 7 cut(s) 439, 496, 580, 633, 684, 1003, 1207
BtsIMutI CAGTG 5 cut(s) 309, 345, 363, 387, 404
Cac8I GCNNGC 1 cut(s) 505
Csp6I GTAC 2 cut(s) 445, 1349
CviAII CATG 9 cut(s) 317, 353, 371, 395, 467, 487, 658, 905, 1178
CviJI RGCY 8 cut(s) 303, 357, 410, 570, 622, 1135, 1430, 1442
CviKI_1 RGCY 8 cut(s) 303, 357, 410, 570, 622, 1135, 1430, 1442
CviQI GTAC 2 cut(s) 445, 1349
DdeI CTNAG 1 cut(s) 1380
DpnI GATC 2 cut(s) 543, 1336
DpnII GATC 2 cut(s) 541, 1334
DraI TTTAAA 2 cut(s) 286, 474
EaeI YGGCCR 2 cut(s) 355, 408
Eam1104I CTCTTC 2 cut(s) 156, 1406
EarI CTCTTC 2 cut(s) 156, 1406
Eco130I CCWWGG 2 cut(s) 352, 1177
Eco32I GATATC 1 cut(s) 36
Eco57I CTGAAG 3 cut(s) 756, 888, 1140
EcoRI GAATTC 1 cut(s) 528
EcoRII CCWGG 1 cut(s) 1018
EcoRV GATATC 1 cut(s) 36
EcoT14I CCWWGG 2 cut(s) 352, 1177
EcoT22I ATGCAT 1 cut(s) 1174
ErhI CCWWGG 2 cut(s) 352, 1177
FaeI CATG 9 cut(s) 320, 356, 374, 398, 470, 490, 661, 908, 1181
FaqI GGGAC 2 cut(s) 1001, 1138
FatI CATG 9 cut(s) 316, 352, 370, 394, 466, 486, 657, 904, 1177
FbaI TGATCA 1 cut(s) 541
FblI GTMKAC 1 cut(s) 423
Fnu4HI GCNGC 5 cut(s) 1066, 1136, 1139, 1428, 1431
FokI GGATG 7 cut(s) 446, 503, 587, 640, 691, 1010, 1214
Fsp4HI GCNGC 5 cut(s) 1066, 1136, 1139, 1428, 1431
FspBI CTAG 2 cut(s) 300, 419
GluI GCNGC 5 cut(s) 1066, 1136, 1139, 1428, 1431
GsaI CCCAGC 1 cut(s) 607
HaeIII GGCC 2 cut(s) 357, 410
HapII CCGG 3 cut(s) 24, 811, 1331
Hin1II CATG 9 cut(s) 320, 356, 374, 398, 470, 490, 661, 908, 1181
HincII GTYRAC 1 cut(s) 1299
HindII GTYRAC 1 cut(s) 1299
HindIII AAGCTT 1 cut(s) 1440
HinfI GANTC 6 cut(s) 221, 560, 592, 749, 791, 884
HpaII CCGG 3 cut(s) 24, 811, 1331
HphI GGTGA 1 cut(s) 38
Hpy166II GTNNAC 2 cut(s) 424, 1299
Hpy188I TCNGA 6 cut(s) 706, 889, 1086, 1216, 1292, 1381
Hpy188III TCNNGA 3 cut(s) 225, 462, 1387
Hpy8I GTNNAC 2 cut(s) 424, 1299
HpyAV CCTTC 5 cut(s) 823, 958, 1115, 1358, 1444
HpyCH4III ACNGT 6 cut(s) 313, 337, 349, 367, 444, 701
HpyCH4IV ACGT 1 cut(s) 60
HpyF10VI GCNNNNNNNGC 1 cut(s) 1439
HpyF3I CTNAG 1 cut(s) 1380
HpySE526I ACGT 1 cut(s) 60
Hsp92II CATG 9 cut(s) 320, 356, 374, 398, 470, 490, 661, 908, 1181
Ksp22I TGATCA 1 cut(s) 541
Kzo9I GATC 2 cut(s) 541, 1334
LmnI GCTCC 1 cut(s) 449
Lsp1109I GCAGC 4 cut(s) 1052, 1122, 1125, 1417
LweI GCATC 4 cut(s) 166, 522, 1159, 1192
MaeI CTAG 2 cut(s) 300, 419
MaeII ACGT 1 cut(s) 60
MalI GATC 2 cut(s) 543, 1336
MboI GATC 2 cut(s) 541, 1334
MfeI CAATTG 2 cut(s) 508, 1092
MhlI GDGCHC 2 cut(s) 454, 956
MlsI TGGCCA 2 cut(s) 357, 410
MluCI AATT 9 cut(s) 259, 264, 274, 508, 528, 683, 1092, 1188, 1286
MluNI TGGCCA 2 cut(s) 357, 410
MlyI GAGTC 1 cut(s) 230
MmeI TCCRAC 2 cut(s) 531, 605
MnlI CCTC 9 cut(s) 198, 209, 757, 973, 1000, 1039, 1175, 1407, 1429
Mox20I TGGCCA 2 cut(s) 357, 410
Mph1103I ATGCAT 1 cut(s) 1174
MroXI GAANNNNTTC 1 cut(s) 900
MscI TGGCCA 2 cut(s) 357, 410
MseI TTAA 9 cut(s) 71, 263, 267, 272, 285, 473, 1191, 1223, 1419
MslI CAYNNNNRTG 3 cut(s) 24, 375, 485
Msp20I TGGCCA 2 cut(s) 357, 410
MspI CCGG 3 cut(s) 24, 811, 1331
MspR9I CCNGG 3 cut(s) 812, 1020, 1332
MunI CAATTG 2 cut(s) 508, 1092
Mva1269I GAATGC 1 cut(s) 1172
MvaI CCWGG 1 cut(s) 1020
MwoI GCNNNNNNNGC 1 cut(s) 1439
NciI CCSGG 2 cut(s) 812, 1332
NcoI CCATGG 2 cut(s) 352, 1177
NdeII GATC 2 cut(s) 541, 1334
NlaIII CATG 9 cut(s) 320, 356, 374, 398, 470, 490, 661, 908, 1181
NmuCI GTSAC 8 cut(s) 295, 307, 343, 361, 385, 402, 414, 1387
NsiI ATGCAT 1 cut(s) 1174
PacI TTAATTAA 1 cut(s) 267
PasI CCCWGGG 1 cut(s) 1019
PctI GAATGC 1 cut(s) 1172
PdmI GAANNNNTTC 1 cut(s) 900
PfeI GAWTC 5 cut(s) 560, 592, 749, 791, 884
PkrI GCNGC 5 cut(s) 1067, 1137, 1140, 1429, 1432
PleI GAGTC 1 cut(s) 229
PpsI GAGTC 1 cut(s) 229
Psp6I CCWGG 1 cut(s) 1018
PspFI CCCAGC 1 cut(s) 603
PspGI CCWGG 1 cut(s) 1018
PstI CTGCAG 3 cut(s) 637, 1143, 1435
RsaI GTAC 2 cut(s) 446, 1350
RsaNI GTAC 2 cut(s) 445, 1349
RseI CAYNNNNRTG 3 cut(s) 24, 375, 485
SaqAI TTAA 9 cut(s) 71, 263, 267, 272, 285, 473, 1191, 1223, 1419
SatI GCNGC 5 cut(s) 1066, 1136, 1139, 1428, 1431
Sau3AI GATC 2 cut(s) 541, 1334
SchI GAGTC 1 cut(s) 230
ScrFI CCNGG 3 cut(s) 812, 1020, 1332
SduI GDGCHC 2 cut(s) 454, 956
SfaNI GCATC 4 cut(s) 166, 522, 1159, 1192
SfcI CTRYAG 3 cut(s) 633, 1139, 1431
SmiMI CAYNNNNRTG 3 cut(s) 24, 375, 485
SpeI ACTAGT 1 cut(s) 418
Sse9I AATT 9 cut(s) 259, 264, 274, 508, 528, 683, 1092, 1188, 1286
SsiI CCGC 1 cut(s) 1427
SspMI CTAG 2 cut(s) 300, 419
StyD4I CCNGG 3 cut(s) 810, 1018, 1330
StyI CCWWGG 2 cut(s) 352, 1177
TaaI ACNGT 6 cut(s) 313, 337, 349, 367, 444, 701
TaiI ACGT 1 cut(s) 63
TaqI TCGA 2 cut(s) 516, 609
TasI AATT 9 cut(s) 259, 264, 274, 508, 528, 683, 1092, 1188, 1286
TauI GCSGC 1 cut(s) 1430
TfiI GAWTC 5 cut(s) 560, 592, 749, 791, 884
Tru1I TTAA 9 cut(s) 71, 263, 267, 272, 285, 473, 1191, 1223, 1419
Tru9I TTAA 9 cut(s) 71, 263, 267, 272, 285, 473, 1191, 1223, 1419
TscAI CASTG 5 cut(s) 316, 352, 370, 394, 411
TseFI GTSAC 8 cut(s) 295, 307, 343, 361, 385, 402, 414, 1387
TseI GCWGC 4 cut(s) 1065, 1135, 1138, 1430
Tsp45I GTSAC 8 cut(s) 295, 307, 343, 361, 385, 402, 414, 1387
TspDTI ATGAA 8 cut(s) 507, 605, 695, 705, 756, 813, 888, 893
TspGWI ACGGA 1 cut(s) 462
TspRI CASTG 5 cut(s) 316, 352, 370, 394, 411
XapI RAATTY 4 cut(s) 274, 528, 683, 1286
XmiI GTMKAC 1 cut(s) 423
XmnI GAANNNNTTC 1 cut(s) 900
XspI CTAG 2 cut(s) 300, 419
Zsp2I ATGCAT 1 cut(s) 1174
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.