Rmu_sc0003832.1_g000010

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003832.1
OG0000100
Physical Location & Seq
Forward (+)
71409 .. 75839
4431 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003832.1_g000010.1.cds

Sequence Viewer

Length: 1482 bp
atggagaggagatggagagacaaagaagatgaaatgggtgaaggaagagatgtcaaaaaacagaaagtaaagaaggtaaaagattttgaagtgcaagaagaagtagaagaaaaacctgaagcagcaccaaagaggaaaaaatatgtgaaaccaggacatgtgcagtacaggtgcactttaataagtttcttgaacacaattaaagataacaagcagaatctcagtgccaaaatattagatttgctcaggcagtcaccatttggaaatattgtcaatgcattccatggtggctacatagaggagaagtcagccaagaaatctgatgatttcattacactcctcctacaagcctacgaccatgaaaatgacctcttcttctttggaaagaagaaattcaggatctcaacaagagatatttcaaagatcctaggaatgccagaaaaaggtgagttggtcccaaagacttctgagggggcatatcagtccgactttatccagcagtttttttcaaacacagcgagaattaacaagagagccgtgaagaaagctctgcaagatgcgctcaaagagaatgcaacaacagaggaagggattgagaagaaggacaaaaatgtggcaagattaatcttgctggacttgttcatcaagtttctgttcccaaatgcaggaggaacaatttcatgggactacgtaaaagcctgcgaaaatttggataagatcagatcttatgactgggcaagggaagttggaagcttcttaaaaaagtctataaagactttgaaaaagaaaaaggagtcaagcagcccatatagtaagaaagatcaatcgactgttgaggaaggtcagtcccatgggatctgcatagtcgaagaatctgcagaagtagcagcatctcaatctccacctcactgcacagtggcagaagaaactaaatcgacacctccatcacacaaggagtcacagttccaaagccccacggtccacatgctcacagtggcagaaatggaacaacaagctgacaagtgtcaaatagtgaaaagtcctataattgaagaagcatttcaacttcgtacgttgagcatagagaaagagaagaagacaccagagcagagccaaaagggagagttaacaatgcaccttacagagcaacattccgaagaaagcaaggagattgaagagagattgaaagatgctgaaaagagagaaaaagaaaaggagatgaaggccttactgtcagatgctgaacgtaaaaagctagaacagatggtagcacaacagaagttggacgatttaccggaggatgttctggaagcaataagagagatggacgctgcagaaaatgcacaaatcaataaagagccagaagagaaacagctacctgctgaggtcgtagactgggaggagagcaaactatacaattttatggaccaggacaccaagaggagagtccagaaatactggcaaaatgcaccatcagggtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1985 PMD

Protein Analysis

493

Amino Acids

56.82

Weight (kDa)

6.26

Isoelectric Point (pI)

60.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000100)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr6g0248691
rosa_multiflora Rmu_co8124940.1_g000001 Rmu_co8378695.1_g000001 Rmu_sc0000023.1_g000005 Rmu_sc0000149.1_g000044 Rmu_sc0000195.1_g000019 Rmu_sc0000270.1_g000002 Rmu_sc0000270.1_g000003 Rmu_sc0000433.1_g000016 Rmu_sc0000493.1_g000067 Rmu_sc0000493.1_g000069 Rmu_sc0000493.1_g000070 Rmu_sc0000493.1_g000071 Rmu_sc0000532.1_g000015 Rmu_sc0000532.1_g000017 Rmu_sc0000552.1_g000004 Rmu_sc0000692.1_g000012 Rmu_sc0000733.1_g000017 Rmu_sc0000738.1_g000026 Rmu_sc0000738.1_g000027 Rmu_sc0000738.1_g000028 Rmu_sc0000738.1_g000030 Rmu_sc0000806.1_g000006 Rmu_sc0000863.1_g000026 Rmu_sc0000863.1_g000027 Rmu_sc0000863.1_g000028 Rmu_sc0000863.1_g000029 Rmu_sc0000863.1_g000030 Rmu_sc0000885.1_g000001 Rmu_sc0001168.1_g000020 Rmu_sc0001168.1_g000021 Rmu_sc0001214.1_g000031 Rmu_sc0001214.1_g000032 Rmu_sc0001239.1_g000003 Rmu_sc0001355.1_g000003 Rmu_sc0001373.1_g000008 Rmu_sc0001373.1_g000009 Rmu_sc0001373.1_g000010 Rmu_sc0001587.1_g000003 Rmu_sc0001648.1_g000020 Rmu_sc0001648.1_g000021 Rmu_sc0001648.1_g000022 Rmu_sc0001648.1_g000023 Rmu_sc0001836.1_g000052 Rmu_sc0001836.1_g000053 Rmu_sc0001913.1_g000025 Rmu_sc0001913.1_g000030 Rmu_sc0001938.1_g000005 Rmu_sc0001938.1_g000007 Rmu_sc0001977.1_g000016 Rmu_sc0001977.1_g000017 Rmu_sc0001977.1_g000018 Rmu_sc0001977.1_g000019 Rmu_sc0002080.1_g000031 Rmu_sc0002095.1_g000011 Rmu_sc0002095.1_g000012 Rmu_sc0002202.1_g000002 Rmu_sc0002202.1_g000004 Rmu_sc0002765.1_g000012 Rmu_sc0002955.1_g000003 Rmu_sc0002983.1_g000001 Rmu_sc0002983.1_g000002 Rmu_sc0002983.1_g000005 Rmu_sc0002983.1_g000006 Rmu_sc0003832.1_g000010 Rmu_sc0003880.1_g000041 Rmu_sc0003880.1_g000043 Rmu_sc0003981.1_g000011 Rmu_sc0003981.1_g000016 Rmu_sc0004118.1_g000013 Rmu_sc0004125.1_g000008 Rmu_sc0004155.1_g000007 Rmu_sc0004155.1_g000008 Rmu_sc0004155.1_g000009 Rmu_sc0004465.1_g000004 Rmu_sc0004465.1_g000005 Rmu_sc0004755.1_g000030 Rmu_sc0005014.1_g000009 Rmu_sc0005023.1_g000027 Rmu_sc0005446.1_g000019 Rmu_sc0006273.1_g000001 Rmu_sc0006948.1_g000020 Rmu_sc0007412.1_g000005 Rmu_sc0007996.1_g000001 Rmu_sc0009749.1_g000002 Rmu_sc0011497.1_g000008 Rmu_sc0011497.1_g000009 Rmu_sc0011497.1_g000010 Rmu_sc0012018.1_g000001 Rmu_sc0012347.1_g000004 Rmu_sc0012347.1_g000005 Rmu_sc0013290.1_g000001 Rmu_sc0013576.1_g000009 Rmu_sc0013576.1_g000011 Rmu_sc0014354.1_g000001 Rmu_sc0014482.1_g000006 Rmu_sc0016848.1_g000001 Rmu_sc0018723.1_g000002 Rmu_sc0018723.1_g000003 Rmu_sc0020085.1_g000001 Rmu_sc0022367.1_g000001 Rmu_sc0023661.1_g000001 Rmu_sc0030814.1_g000001 Rmu_sc0034982.1_g000001 Rmu_sc0036901.1_g000001 Rmu_ssc0000064.1_g000016 Rmu_ssc0000170.1_g000012 Rmu_ssc0000170.1_g000014 Rmu_ssc0000189.1_g000048 Rmu_ssc0000443.1_g000005
rosa_roxburghii Rroxscaffold_159G00432950 Rroxscaffold_1G00015760 Rroxscaffold_1G00015770 Rroxscaffold_1G00015780 Rroxscaffold_1G00015950 Rroxscaffold_1G00015980 Rroxscaffold_1G00018050 Rroxscaffold_1G00018060 Rroxscaffold_1G00020330 Rroxscaffold_1G00020340 Rroxscaffold_1G00020350 Rroxscaffold_1G00020370 Rroxscaffold_1G00021720 Rroxscaffold_1G00034800 Rroxscaffold_1G00036050 Rroxscaffold_1G00036060 Rroxscaffold_1G00036070 Rroxscaffold_1G00036160 Rroxscaffold_1G00036170 Rroxscaffold_1G00043200 Rroxscaffold_1G00043210 Rroxscaffold_1G00047700 Rroxscaffold_1G00055120 Rroxscaffold_1G00056300 Rroxscaffold_1G00056320 Rroxscaffold_1G00064030 Rroxscaffold_1G00064050 Rroxscaffold_1G00064110 Rroxscaffold_1G00064130 Rroxscaffold_1G00064140 Rroxscaffold_1G00069580 Rroxscaffold_1G00069590 Rroxscaffold_1G00069600 Rroxscaffold_2G00086000 Rroxscaffold_2G00095520 Rroxscaffold_2G00095530 Rroxscaffold_2G00102950 Rroxscaffold_2G00102960 Rroxscaffold_2G00102980 Rroxscaffold_2G00111430 Rroxscaffold_2G00111440 Rroxscaffold_2G00123850 Rroxscaffold_2G00123860 Rroxscaffold_2G00123870 Rroxscaffold_2G00127600 Rroxscaffold_2G00128430 Rroxscaffold_2G00128440 Rroxscaffold_2G00134550 Rroxscaffold_2G00134560 Rroxscaffold_2G00134570 Rroxscaffold_2G00150440 Rroxscaffold_2G00150450 Rroxscaffold_3G00221670 Rroxscaffold_3G00231550 Rroxscaffold_3G00231560 Rroxscaffold_3G00231580 Rroxscaffold_3G00231590 Rroxscaffold_3G00238200 Rroxscaffold_3G00238210 Rroxscaffold_3G00259430 Rroxscaffold_3G00271580 Rroxscaffold_3G00271590 Rroxscaffold_4G00277030 Rroxscaffold_4G00277050 Rroxscaffold_4G00277060 Rroxscaffold_4G00277070 Rroxscaffold_4G00293250 Rroxscaffold_4G00293260 Rroxscaffold_4G00300140 Rroxscaffold_4G00308740 Rroxscaffold_4G00309540 Rroxscaffold_4G00319500 Rroxscaffold_4G00325410 Rroxscaffold_4G00328420 Rroxscaffold_4G00329630 Rroxscaffold_5G00339100 Rroxscaffold_5G00339110 Rroxscaffold_5G00339130 Rroxscaffold_5G00349460 Rroxscaffold_5G00349470 Rroxscaffold_5G00349480 Rroxscaffold_5G00349490 Rroxscaffold_5G00349800 Rroxscaffold_5G00354000 Rroxscaffold_5G00357420 Rroxscaffold_5G00357430 Rroxscaffold_5G00366730 Rroxscaffold_5G00366740 Rroxscaffold_5G00366750 Rroxscaffold_5G00371380 Rroxscaffold_5G00371390 Rroxscaffold_5G00371410 Rroxscaffold_6G00390390 Rroxscaffold_6G00390400 Rroxscaffold_6G00390410 Rroxscaffold_6G00391800 Rroxscaffold_6G00391810 Rroxscaffold_6G00399200 Rroxscaffold_6G00403500 Rroxscaffold_6G00403510 Rroxscaffold_6G00403520 Rroxscaffold_6G00407230 Rroxscaffold_6G00411100 Rroxscaffold_6G00411700 Rroxscaffold_6G00415300 Rroxscaffold_6G00415310 Rroxscaffold_6G00422180 Rroxscaffold_6G00422200 Rroxscaffold_6G00422210 Rroxscaffold_7G00157710 Rroxscaffold_7G00157720 Rroxscaffold_7G00157740 Rroxscaffold_7G00194140 Rroxscaffold_7G00196750 Rroxscaffold_7G00197960 Rroxscaffold_7G00208750 Rroxscaffold_7G00208760 Rroxscaffold_7G00208780 Rroxscaffold_7G00213740 Rroxscaffold_7G00215180 Rroxscaffold_7G00215190 Rroxscaffold_7G00215200
rosa_rugosa Rorug03G0270600 Rorug05G0169200
rosa_samantha Rh1AG048500 Rh1AG091500 Rh1AG190900 Rh2BG351700 Rh2BG494300 Rh2BG539800 Rh3BG209100 Rh4CG136600 Rh4CG194800 Rh4CG381100 Rh5BG080500 Rh5BG083000 Rh5BG083100 Rh5BG124000 Rh5BG126200 Rh5BG131000 Rh5BG158900 Rh5BG284300 Rh5BG310800 Rh5BG437700 Rh6AG114700 Rh6AG126300 Rh6AG202500 Rh7CG009000 Rh7CG320700 Rh7CG355200 Rh7CG514200
rosa_wichuraiana Rw5G018600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1387
AccI GTMKAC 1 cut(s) 1392
AclWI GGATC 3 cut(s) 407, 418, 863
AcsI RAATTY 2 cut(s) 392, 706
AcuI CTGAAG 1 cut(s) 138
AfaI GTAC 2 cut(s) 167, 1072
AfiI CCNNNNNNNGG 2 cut(s) 443, 665
AflIII ACRYGT 1 cut(s) 157
AgsI TTSAA 9 cut(s) 89, 193, 420, 510, 781, 1052, 1064, 1175, 1186
AjnI CCWGG 2 cut(s) 151, 1428
AloI GAACNNNNNNTCC 2 cut(s) 947, 979
AluBI AGCT 5 cut(s) 548, 753, 1016, 1255, 1375
AluI AGCT 5 cut(s) 548, 753, 1016, 1255, 1375
Alw21I GWGCWC 1 cut(s) 176
Alw26I GTCTC 1 cut(s) 12
Alw44I GTGCAC 1 cut(s) 172
AlwI GGATC 3 cut(s) 407, 418, 863
AlwNI CAGNNNCTG 1 cut(s) 1241
AoxI GGCC 1 cut(s) 1224
ApaLI GTGCAC 1 cut(s) 172
ApeKI GCWGC 4 cut(s) 122, 801, 887, 1331
ApoI RAATTY 2 cut(s) 392, 706
AseI ATTAAT 1 cut(s) 623
Asp700I GAANNNNTTC 3 cut(s) 392, 676, 1059
AspA2I CCTAGG 1 cut(s) 427
AspLEI GCGC 1 cut(s) 562
AspS9I GGNCC 3 cut(s) 454, 979, 1426
AsuHPI GGTGA 3 cut(s) 50, 246, 458
AvaII GGWCC 3 cut(s) 454, 979, 1426
AvrII CCTAGG 1 cut(s) 427
BaeGI GKGCMC 1 cut(s) 176
BbsI GAAGAC 1 cut(s) 1103
Bbv12I GWGCWC 1 cut(s) 176
BbvCI CCTCAGC 1 cut(s) 1383
BbvI GCAGC 4 cut(s) 134, 813, 899, 1318
BccI CCATC 5 cut(s) 6, 952, 1258, 1318, 1480
BceAI ACGGC 1 cut(s) 521
BcgI CGANNNNNNTGC 2 cut(s) 857, 891
BciT130I CCWGG 2 cut(s) 153, 1430
BcoDI GTCTC 1 cut(s) 12
BfaI CTAG 2 cut(s) 428, 1256
BfmI CTRYAG 2 cut(s) 876, 1332
BfuAI ACCTGC 1 cut(s) 1387
BglII AGATCT 1 cut(s) 722
BisI GCNGC 4 cut(s) 123, 802, 888, 1332
BlnI CCTAGG 1 cut(s) 427
BlsI GCNGC 4 cut(s) 124, 803, 889, 1333
Bme1390I CCNGG 2 cut(s) 153, 1430
Bme18I GGWCC 3 cut(s) 454, 979, 1426
BmgT120I GGNCC 3 cut(s) 454, 979, 1426
BmiI GGNNCC 1 cut(s) 456
BmrFI CCNGG 2 cut(s) 153, 1430
BmrI ACTGGG 2 cut(s) 742, 1405
BmsI GCATC 4 cut(s) 547, 899, 1180, 1228
BmuI ACTGGG 2 cut(s) 742, 1405
BoxI GACNNNNGTC 1 cut(s) 1023
BpiI GAAGAC 1 cut(s) 1103
Bpu10I CCTNAGC 2 cut(s) 245, 1383
BsaAI YACGTR 1 cut(s) 691
BsaJI CCNNGG 4 cut(s) 283, 427, 850, 975
BsaWI WCCGGW 1 cut(s) 1294
BsaXI ACNNNNNCTCC 2 cut(s) 947, 977
Bsc4I CCNNNNNNNGG 2 cut(s) 443, 665
Bse1I ACTGG 3 cut(s) 737, 1400, 1463
BseBI CCWGG 2 cut(s) 153, 1430
BseDI CCNNGG 4 cut(s) 283, 427, 850, 975
BseGI GGATG 1 cut(s) 1306
BseLI CCNNNNNNNGG 2 cut(s) 443, 665
BseMII CTCAG 4 cut(s) 235, 259, 459, 1374
BseNI ACTGG 3 cut(s) 737, 1400, 1463
BseRI GAGGAG 5 cut(s) 22, 314, 329, 1415, 1456
BseSI GKGCMC 1 cut(s) 176
BseXI GCAGC 4 cut(s) 134, 813, 899, 1318
BsgI GTGCAG 2 cut(s) 182, 895
BshFI GGCC 1 cut(s) 1226
BsiHKAI GWGCWC 1 cut(s) 176
BsiSI CCGG 1 cut(s) 1295
BsiWI CGTACG 1 cut(s) 1070
BslFI GGGAC 3 cut(s) 440, 698, 832
BslI CCNNNNNNNGG 2 cut(s) 443, 665
BsmAI GTCTC 1 cut(s) 12
BsmFI GGGAC 3 cut(s) 440, 698, 832
BsmI GAATGC 3 cut(s) 278, 438, 577
BsnI GGCC 1 cut(s) 1226
Bsp1286I GDGCHC 1 cut(s) 176
Bsp143I GATC 6 cut(s) 399, 423, 717, 722, 820, 855
Bsp19I CCATGG 2 cut(s) 283, 850
BspANI GGCC 1 cut(s) 1226
BspCNI CTCAG 4 cut(s) 234, 258, 460, 1375
BspLI GGNNCC 1 cut(s) 456
BspMAI CTGCAG 2 cut(s) 880, 1336
BspMI ACCTGC 1 cut(s) 1387
BspPI GGATC 3 cut(s) 407, 418, 863
BsrI ACTGG 3 cut(s) 737, 1400, 1463
BssECI CCNNGG 4 cut(s) 283, 427, 850, 975
BssMI GATC 6 cut(s) 399, 423, 717, 722, 820, 855
BssT1I CCWWGG 3 cut(s) 283, 427, 850
Bst2UI CCWGG 2 cut(s) 153, 1430
Bst4CI ACNGT 6 cut(s) 832, 916, 963, 979, 994, 1233
Bst6I CTCTTC 4 cut(s) 40, 377, 1170, 1359
BstAPI GCANNNNNTGC 1 cut(s) 1340
BstBAI YACGTR 1 cut(s) 691
BstC8I GCNNGC 1 cut(s) 700
BstDEI CTNAG 4 cut(s) 221, 245, 468, 1383
BstDSI CCRYGG 3 cut(s) 283, 850, 975
BstF5I GGATG 1 cut(s) 1306
BstHHI GCGC 1 cut(s) 562
BstKTI GATC 6 cut(s) 402, 426, 720, 725, 823, 858
BstMAI GTCTC 1 cut(s) 12
BstMBI GATC 6 cut(s) 399, 423, 717, 722, 820, 855
BstMWI GCNNNNNNNGC 3 cut(s) 559, 884, 1340
BstNI CCWGG 2 cut(s) 153, 1430
BstNSI RCATGY 2 cut(s) 161, 988
BstPAI GACNNNNGTC 1 cut(s) 1023
BstSCI CCNGG 2 cut(s) 151, 1428
BstSFI CTRYAG 2 cut(s) 876, 1332
BstSLI GKGCMC 1 cut(s) 176
BstSNI TACGTA 1 cut(s) 691
BstV1I GCAGC 4 cut(s) 134, 813, 899, 1318
BstV2I GAAGAC 1 cut(s) 1103
BstX2I RGATCY 4 cut(s) 399, 423, 722, 855
BstYI RGATCY 4 cut(s) 399, 423, 722, 855
BsuRI GGCC 1 cut(s) 1226
BtgI CCRYGG 3 cut(s) 283, 850, 975
BtsCI GGATG 1 cut(s) 1306
BtsI GCAGTG 1 cut(s) 907
BtsIMutI CAGTG 4 cut(s) 229, 907, 921, 999
BveI ACCTGC 1 cut(s) 1387
Cac8I GCNNGC 1 cut(s) 700
CaiI CAGNNNCTG 1 cut(s) 1241
CfoI GCGC 1 cut(s) 562
Cfr13I GGNCC 3 cut(s) 454, 979, 1426
CseI GACGC 1 cut(s) 1337
Csp6I GTAC 2 cut(s) 166, 1071
CviAII CATG 6 cut(s) 158, 284, 359, 681, 851, 985
CviQI GTAC 2 cut(s) 166, 1071
DdeI CTNAG 4 cut(s) 221, 245, 468, 1383
DpnI GATC 6 cut(s) 401, 425, 719, 724, 822, 857
DpnII GATC 6 cut(s) 399, 423, 717, 722, 820, 855
Eam1104I CTCTTC 4 cut(s) 40, 377, 1170, 1359
EarI CTCTTC 4 cut(s) 40, 377, 1170, 1359
Eco105I TACGTA 1 cut(s) 691
Eco130I CCWWGG 3 cut(s) 283, 427, 850
Eco147I AGGCCT 1 cut(s) 1226
Eco47I GGWCC 3 cut(s) 454, 979, 1426
Eco57I CTGAAG 1 cut(s) 138
EcoRII CCWGG 2 cut(s) 151, 1428
EcoT14I CCWWGG 3 cut(s) 283, 427, 850
EcoT22I ATGCAT 1 cut(s) 280
ErhI CCWWGG 3 cut(s) 283, 427, 850
FaeI CATG 6 cut(s) 161, 287, 362, 684, 854, 988
FaqI GGGAC 3 cut(s) 440, 698, 832
FatI CATG 6 cut(s) 157, 283, 358, 680, 850, 984
FblI GTMKAC 1 cut(s) 1392
Fnu4HI GCNGC 4 cut(s) 123, 802, 888, 1332
FokI GGATG 1 cut(s) 1313
Fsp4HI GCNGC 4 cut(s) 123, 802, 888, 1332
FspBI CTAG 2 cut(s) 428, 1256
GlaI GCGC 1 cut(s) 561
GluI GCNGC 4 cut(s) 123, 802, 888, 1332
HaeIII GGCC 1 cut(s) 1226
HapII CCGG 1 cut(s) 1295
HgaI GACGC 1 cut(s) 1337
HhaI GCGC 1 cut(s) 562
Hin1II CATG 6 cut(s) 161, 287, 362, 684, 854, 988
Hin6I GCGC 1 cut(s) 560
HinP1I GCGC 1 cut(s) 560
HincII GTYRAC 1 cut(s) 1128
HindII GTYRAC 1 cut(s) 1128
HindIII AAGCTT 1 cut(s) 751
HinfI GANTC 5 cut(s) 217, 794, 872, 956, 1446
HpaI GTTAAC 1 cut(s) 1128
HpaII CCGG 1 cut(s) 1295
HphI GGTGA 3 cut(s) 50, 246, 458
Hpy166II GTNNAC 4 cut(s) 174, 982, 1128, 1393
Hpy188I TCNGA 6 cut(s) 322, 469, 487, 722, 1156, 1237
Hpy188III TCNNGA 4 cut(s) 190, 397, 1307, 1450
Hpy8I GTNNAC 4 cut(s) 174, 982, 1128, 1393
HpyAV CCTTC 6 cut(s) 35, 67, 581, 595, 833, 1216
HpyCH4III ACNGT 6 cut(s) 832, 916, 963, 979, 994, 1233
HpyCH4IV ACGT 3 cut(s) 690, 1073, 1246
HpyF10VI GCNNNNNNNGC 3 cut(s) 559, 884, 1340
HpyF3I CTNAG 4 cut(s) 221, 245, 468, 1383
HpySE526I ACGT 3 cut(s) 690, 1073, 1246
Hsp92II CATG 6 cut(s) 161, 287, 362, 684, 854, 988
HspAI GCGC 1 cut(s) 560
KspAI GTTAAC 1 cut(s) 1128
Kzo9I GATC 6 cut(s) 399, 423, 717, 722, 820, 855
Lsp1109I GCAGC 4 cut(s) 134, 813, 899, 1318
LweI GCATC 4 cut(s) 547, 899, 1180, 1228
MaeI CTAG 2 cut(s) 428, 1256
MaeII ACGT 3 cut(s) 690, 1073, 1246
MaeIII GTNAC 2 cut(s) 252, 957
MalI GATC 6 cut(s) 401, 425, 719, 724, 822, 857
MboI GATC 6 cut(s) 399, 423, 717, 722, 820, 855
MflI RGATCY 4 cut(s) 399, 423, 722, 855
MhlI GDGCHC 1 cut(s) 176
MluCI AATT 7 cut(s) 198, 392, 522, 675, 706, 1047, 1417
MlyI GAGTC 3 cut(s) 803, 965, 1455
MmeI TCCRAC 3 cut(s) 510, 727, 1263
Mph1103I ATGCAT 1 cut(s) 280
MroXI GAANNNNTTC 3 cut(s) 392, 676, 1059
MseI TTAA 6 cut(s) 179, 201, 525, 623, 758, 1127
MslI CAYNNNNRTG 1 cut(s) 363
MspI CCGG 1 cut(s) 1295
MspR9I CCNGG 2 cut(s) 153, 1430
Mva1269I GAATGC 3 cut(s) 278, 438, 577
MvaI CCWGG 2 cut(s) 153, 1430
MwoI GCNNNNNNNGC 3 cut(s) 559, 884, 1340
NcoI CCATGG 2 cut(s) 283, 850
NdeII GATC 6 cut(s) 399, 423, 717, 722, 820, 855
NlaIII CATG 6 cut(s) 161, 287, 362, 684, 854, 988
NlaIV GGNNCC 1 cut(s) 456
NmuCI GTSAC 2 cut(s) 252, 957
NsiI ATGCAT 1 cut(s) 280
NspI RCATGY 2 cut(s) 161, 988
PceI AGGCCT 1 cut(s) 1226
PciI ACATGT 1 cut(s) 157
PctI GAATGC 3 cut(s) 278, 438, 577
PdmI GAANNNNTTC 3 cut(s) 392, 676, 1059
PfeI GAWTC 2 cut(s) 217, 872
Pfl23II CGTACG 1 cut(s) 1070
PkrI GCNGC 4 cut(s) 124, 803, 889, 1333
PleI GAGTC 3 cut(s) 802, 964, 1454
PpsI GAGTC 3 cut(s) 802, 964, 1454
Ppu21I YACGTR 1 cut(s) 691
PscI ACATGT 1 cut(s) 157
PshAI GACNNNNGTC 1 cut(s) 1023
PshBI ATTAAT 1 cut(s) 623
Psp6I CCWGG 2 cut(s) 151, 1428
PspGI CCWGG 2 cut(s) 151, 1428
PspLI CGTACG 1 cut(s) 1070
PspN4I GGNNCC 1 cut(s) 456
PspPI GGNCC 3 cut(s) 454, 979, 1426
PstI CTGCAG 2 cut(s) 880, 1336
PstNI CAGNNNCTG 1 cut(s) 1241
PsuI RGATCY 4 cut(s) 399, 423, 722, 855
RsaI GTAC 2 cut(s) 167, 1072
RsaNI GTAC 2 cut(s) 166, 1071
RseI CAYNNNNRTG 1 cut(s) 363
SaqAI TTAA 6 cut(s) 179, 201, 525, 623, 758, 1127
SatI GCNGC 4 cut(s) 123, 802, 888, 1332
Sau3AI GATC 6 cut(s) 399, 423, 717, 722, 820, 855
Sau96I GGNCC 3 cut(s) 454, 979, 1426
SchI GAGTC 3 cut(s) 803, 965, 1455
ScrFI CCNGG 2 cut(s) 153, 1430
SduI GDGCHC 1 cut(s) 176
SfaNI GCATC 4 cut(s) 547, 899, 1180, 1228
SfcI CTRYAG 2 cut(s) 876, 1332
SinI GGWCC 3 cut(s) 454, 979, 1426
SmiMI CAYNNNNRTG 1 cut(s) 363
SnaBI TACGTA 1 cut(s) 691
Sse9I AATT 7 cut(s) 198, 392, 522, 675, 706, 1047, 1417
SseBI AGGCCT 1 cut(s) 1226
SspI AATATT 2 cut(s) 234, 268
SspMI CTAG 2 cut(s) 428, 1256
StuI AGGCCT 1 cut(s) 1226
StyD4I CCNGG 2 cut(s) 151, 1428
StyI CCWWGG 3 cut(s) 283, 427, 850
TaaI ACNGT 6 cut(s) 832, 916, 963, 979, 994, 1233
TaiI ACGT 3 cut(s) 693, 1076, 1249
TaqI TCGA 3 cut(s) 827, 867, 935
TasI AATT 7 cut(s) 198, 392, 522, 675, 706, 1047, 1417
TatI WGTACW 1 cut(s) 165
TfiI GAWTC 2 cut(s) 217, 872
Tru1I TTAA 6 cut(s) 179, 201, 525, 623, 758, 1127
Tru9I TTAA 6 cut(s) 179, 201, 525, 623, 758, 1127
TscAI CASTG 4 cut(s) 229, 914, 921, 999
TseFI GTSAC 2 cut(s) 252, 957
TseI GCWGC 4 cut(s) 122, 801, 887, 1331
Tsp45I GTSAC 2 cut(s) 252, 957
TspDTI ATGAA 6 cut(s) 45, 319, 375, 631, 669, 1235
TspRI CASTG 4 cut(s) 229, 914, 921, 999
VneI GTGCAC 1 cut(s) 172
VpaK11BI GGWCC 3 cut(s) 454, 979, 1426
VspI ATTAAT 1 cut(s) 623
XapI RAATTY 2 cut(s) 392, 706
XceI RCATGY 2 cut(s) 161, 988
XmaJI CCTAGG 1 cut(s) 427
XmiI GTMKAC 1 cut(s) 1392
XmnI GAANNNNTTC 3 cut(s) 392, 676, 1059
XspI CTAG 2 cut(s) 428, 1256
Zsp2I ATGCAT 1 cut(s) 280
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.