Rroxscaffold_2G00134550

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0000100
Physical Location & Seq
Forward (+)
72121109 .. 72126358
5250 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00134550.1

Sequence Viewer

Length: 738 bp
ATGGTAAGATCCATGCATTATAAGGTGAGGCACAAGTACGAAGAACGTGCCCCATCCTCTATGGCATCAAACATTCACATTAGAACCTTCTCGCCGGGTCCTCCTTTGGTTGGCGACGGCATTGTACCTCCGATCAAGAAGGATAGGTTCAACCTCCTTTGCGATCCAAAACTTGATGGTGACGGCAGGTCTTCTAAGATTCTCAAGAGGAAGCGAGAAGAGGATGAAAAACCCGAAGCTGCGCCAAAGAGGAAGAGACATGTGAAACCGGGACATGTGCAGTACGGGTGCACATTAATAAGTTTCTTGAACACAATTAAAGATAACAAGAAGAATCTGAGTCCAAGAACACTAGATTTGCTCGAGCGGACACTATTTGGAAATATTGTCGATGCATTCCATGGTAGCCACATAGAGGAGAAGTCGGCCAAGAAATCGATGATTTCATTACCCTCCCTGCCGCAAGCCTACAACCATGAAAAGGACCTCTTCGTCTTTGAAAAGAAGAAATTCGGGATCTCGATAAGAGATATTTCACGGATCCTAGGACTGCCACAAAAGGTGAGTTGGTCCCAAGAACTTCGAGGGTGCATATCAGTCCGAATTTGTGGAGAAGTTTTTCGAACACGGCGAGAATTAACAAGAAAGCTGTGGAGAAAGCTCTGCAAAATGCCATCAAAGATAAGCCAACAGCCGGGGAAGAGATTGAGAAGAAGGACAAAAATGTGGCAAGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1985 PMD

Protein Analysis

245

Amino Acids

28.41

Weight (kDa)

10.34

Isoelectric Point (pI)

71.35

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000100)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr6g0248691
rosa_multiflora Rmu_co8124940.1_g000001 Rmu_co8378695.1_g000001 Rmu_sc0000023.1_g000005 Rmu_sc0000149.1_g000044 Rmu_sc0000195.1_g000019 Rmu_sc0000270.1_g000002 Rmu_sc0000270.1_g000003 Rmu_sc0000433.1_g000016 Rmu_sc0000493.1_g000067 Rmu_sc0000493.1_g000069 Rmu_sc0000493.1_g000070 Rmu_sc0000493.1_g000071 Rmu_sc0000532.1_g000015 Rmu_sc0000532.1_g000017 Rmu_sc0000552.1_g000004 Rmu_sc0000692.1_g000012 Rmu_sc0000733.1_g000017 Rmu_sc0000738.1_g000026 Rmu_sc0000738.1_g000027 Rmu_sc0000738.1_g000028 Rmu_sc0000738.1_g000030 Rmu_sc0000806.1_g000006 Rmu_sc0000863.1_g000026 Rmu_sc0000863.1_g000027 Rmu_sc0000863.1_g000028 Rmu_sc0000863.1_g000029 Rmu_sc0000863.1_g000030 Rmu_sc0000885.1_g000001 Rmu_sc0001168.1_g000020 Rmu_sc0001168.1_g000021 Rmu_sc0001214.1_g000031 Rmu_sc0001214.1_g000032 Rmu_sc0001239.1_g000003 Rmu_sc0001355.1_g000003 Rmu_sc0001373.1_g000008 Rmu_sc0001373.1_g000009 Rmu_sc0001373.1_g000010 Rmu_sc0001587.1_g000003 Rmu_sc0001648.1_g000020 Rmu_sc0001648.1_g000021 Rmu_sc0001648.1_g000022 Rmu_sc0001648.1_g000023 Rmu_sc0001836.1_g000052 Rmu_sc0001836.1_g000053 Rmu_sc0001913.1_g000025 Rmu_sc0001913.1_g000030 Rmu_sc0001938.1_g000005 Rmu_sc0001938.1_g000007 Rmu_sc0001977.1_g000016 Rmu_sc0001977.1_g000017 Rmu_sc0001977.1_g000018 Rmu_sc0001977.1_g000019 Rmu_sc0002080.1_g000031 Rmu_sc0002095.1_g000011 Rmu_sc0002095.1_g000012 Rmu_sc0002202.1_g000002 Rmu_sc0002202.1_g000004 Rmu_sc0002765.1_g000012 Rmu_sc0002955.1_g000003 Rmu_sc0002983.1_g000001 Rmu_sc0002983.1_g000002 Rmu_sc0002983.1_g000005 Rmu_sc0002983.1_g000006 Rmu_sc0003832.1_g000010 Rmu_sc0003880.1_g000041 Rmu_sc0003880.1_g000043 Rmu_sc0003981.1_g000011 Rmu_sc0003981.1_g000016 Rmu_sc0004118.1_g000013 Rmu_sc0004125.1_g000008 Rmu_sc0004155.1_g000007 Rmu_sc0004155.1_g000008 Rmu_sc0004155.1_g000009 Rmu_sc0004465.1_g000004 Rmu_sc0004465.1_g000005 Rmu_sc0004755.1_g000030 Rmu_sc0005014.1_g000009 Rmu_sc0005023.1_g000027 Rmu_sc0005446.1_g000019 Rmu_sc0006273.1_g000001 Rmu_sc0006948.1_g000020 Rmu_sc0007412.1_g000005 Rmu_sc0007996.1_g000001 Rmu_sc0009749.1_g000002 Rmu_sc0011497.1_g000008 Rmu_sc0011497.1_g000009 Rmu_sc0011497.1_g000010 Rmu_sc0012018.1_g000001 Rmu_sc0012347.1_g000004 Rmu_sc0012347.1_g000005 Rmu_sc0013290.1_g000001 Rmu_sc0013576.1_g000009 Rmu_sc0013576.1_g000011 Rmu_sc0014354.1_g000001 Rmu_sc0014482.1_g000006 Rmu_sc0016848.1_g000001 Rmu_sc0018723.1_g000002 Rmu_sc0018723.1_g000003 Rmu_sc0020085.1_g000001 Rmu_sc0022367.1_g000001 Rmu_sc0023661.1_g000001 Rmu_sc0030814.1_g000001 Rmu_sc0034982.1_g000001 Rmu_sc0036901.1_g000001 Rmu_ssc0000064.1_g000016 Rmu_ssc0000170.1_g000012 Rmu_ssc0000170.1_g000014 Rmu_ssc0000189.1_g000048 Rmu_ssc0000443.1_g000005
rosa_roxburghii Rroxscaffold_159G00432950 Rroxscaffold_1G00015760 Rroxscaffold_1G00015770 Rroxscaffold_1G00015780 Rroxscaffold_1G00015950 Rroxscaffold_1G00015980 Rroxscaffold_1G00018050 Rroxscaffold_1G00018060 Rroxscaffold_1G00020330 Rroxscaffold_1G00020340 Rroxscaffold_1G00020350 Rroxscaffold_1G00020370 Rroxscaffold_1G00021720 Rroxscaffold_1G00034800 Rroxscaffold_1G00036050 Rroxscaffold_1G00036060 Rroxscaffold_1G00036070 Rroxscaffold_1G00036160 Rroxscaffold_1G00036170 Rroxscaffold_1G00043200 Rroxscaffold_1G00043210 Rroxscaffold_1G00047700 Rroxscaffold_1G00055120 Rroxscaffold_1G00056300 Rroxscaffold_1G00056320 Rroxscaffold_1G00064030 Rroxscaffold_1G00064050 Rroxscaffold_1G00064110 Rroxscaffold_1G00064130 Rroxscaffold_1G00064140 Rroxscaffold_1G00069580 Rroxscaffold_1G00069590 Rroxscaffold_1G00069600 Rroxscaffold_2G00086000 Rroxscaffold_2G00095520 Rroxscaffold_2G00095530 Rroxscaffold_2G00102950 Rroxscaffold_2G00102960 Rroxscaffold_2G00102980 Rroxscaffold_2G00111430 Rroxscaffold_2G00111440 Rroxscaffold_2G00123850 Rroxscaffold_2G00123860 Rroxscaffold_2G00123870 Rroxscaffold_2G00127600 Rroxscaffold_2G00128430 Rroxscaffold_2G00128440 Rroxscaffold_2G00134550 Rroxscaffold_2G00134560 Rroxscaffold_2G00134570 Rroxscaffold_2G00150440 Rroxscaffold_2G00150450 Rroxscaffold_3G00221670 Rroxscaffold_3G00231550 Rroxscaffold_3G00231560 Rroxscaffold_3G00231580 Rroxscaffold_3G00231590 Rroxscaffold_3G00238200 Rroxscaffold_3G00238210 Rroxscaffold_3G00259430 Rroxscaffold_3G00271580 Rroxscaffold_3G00271590 Rroxscaffold_4G00277030 Rroxscaffold_4G00277050 Rroxscaffold_4G00277060 Rroxscaffold_4G00277070 Rroxscaffold_4G00293250 Rroxscaffold_4G00293260 Rroxscaffold_4G00300140 Rroxscaffold_4G00308740 Rroxscaffold_4G00309540 Rroxscaffold_4G00319500 Rroxscaffold_4G00325410 Rroxscaffold_4G00328420 Rroxscaffold_4G00329630 Rroxscaffold_5G00339100 Rroxscaffold_5G00339110 Rroxscaffold_5G00339130 Rroxscaffold_5G00349460 Rroxscaffold_5G00349470 Rroxscaffold_5G00349480 Rroxscaffold_5G00349490 Rroxscaffold_5G00349800 Rroxscaffold_5G00354000 Rroxscaffold_5G00357420 Rroxscaffold_5G00357430 Rroxscaffold_5G00366730 Rroxscaffold_5G00366740 Rroxscaffold_5G00366750 Rroxscaffold_5G00371380 Rroxscaffold_5G00371390 Rroxscaffold_5G00371410 Rroxscaffold_6G00390390 Rroxscaffold_6G00390400 Rroxscaffold_6G00390410 Rroxscaffold_6G00391800 Rroxscaffold_6G00391810 Rroxscaffold_6G00399200 Rroxscaffold_6G00403500 Rroxscaffold_6G00403510 Rroxscaffold_6G00403520 Rroxscaffold_6G00407230 Rroxscaffold_6G00411100 Rroxscaffold_6G00411700 Rroxscaffold_6G00415300 Rroxscaffold_6G00415310 Rroxscaffold_6G00422180 Rroxscaffold_6G00422200 Rroxscaffold_6G00422210 Rroxscaffold_7G00157710 Rroxscaffold_7G00157720 Rroxscaffold_7G00157740 Rroxscaffold_7G00194140 Rroxscaffold_7G00196750 Rroxscaffold_7G00197960 Rroxscaffold_7G00208750 Rroxscaffold_7G00208760 Rroxscaffold_7G00208780 Rroxscaffold_7G00213740 Rroxscaffold_7G00215180 Rroxscaffold_7G00215190 Rroxscaffold_7G00215200
rosa_rugosa Rorug03G0270600 Rorug05G0169200
rosa_samantha Rh1AG048500 Rh1AG091500 Rh1AG190900 Rh2BG351700 Rh2BG494300 Rh2BG539800 Rh3BG209100 Rh4CG136600 Rh4CG194800 Rh4CG381100 Rh5BG080500 Rh5BG083000 Rh5BG083100 Rh5BG124000 Rh5BG126200 Rh5BG131000 Rh5BG158900 Rh5BG284300 Rh5BG310800 Rh5BG437700 Rh6AG114700 Rh6AG126300 Rh6AG202500 Rh7CG009000 Rh7CG320700 Rh7CG355200 Rh7CG514200
rosa_wichuraiana Rw5G018600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 21
AasI GACNNNNNNGTC 1 cut(s) 491
Acc36I ACCTGC 1 cut(s) 177
AccBSI CCGCTC 1 cut(s) 367
AciI CCGC 2 cut(s) 367, 461
AclWI GGATC 5 cut(s) 3, 158, 524, 535, 548
AcoI YGGCCR 1 cut(s) 426
AcsI RAATTY 2 cut(s) 509, 603
AfaI GTAC 3 cut(s) 38, 126, 284
AfiI CCNNNNNNNGG 4 cut(s) 110, 415, 481, 694
AflIII ACRYGT 2 cut(s) 259, 274
AgsI TTSAA 3 cut(s) 151, 310, 500
AhdI GACNNNNNGTC 1 cut(s) 187
AluBI AGCT 4 cut(s) 239, 649, 661, 734
AluI AGCT 4 cut(s) 239, 649, 661, 734
Alw21I GWGCWC 1 cut(s) 293
Alw26I GTCTC 1 cut(s) 250
Alw44I GTGCAC 1 cut(s) 289
AlwI GGATC 5 cut(s) 3, 158, 524, 535, 548
Ama87I CYCGRG 1 cut(s) 362
AoxI GGCC 1 cut(s) 426
ApaLI GTGCAC 1 cut(s) 289
ApeKI GCWGC 1 cut(s) 239
ApoI RAATTY 2 cut(s) 509, 603
AseI ATTAAT 1 cut(s) 296
Asp700I GAANNNNTTC 2 cut(s) 509, 618
AspA2I CCTAGG 1 cut(s) 544
AspLEI GCGC 1 cut(s) 244
AspS9I GGNCC 3 cut(s) 98, 484, 570
AsuC2I CCSGG 3 cut(s) 96, 270, 696
AsuHPI GGTGA 3 cut(s) 37, 191, 574
AsuII TTCGAA 1 cut(s) 622
AvaI CYCGRG 1 cut(s) 362
AvaII GGWCC 3 cut(s) 98, 484, 570
AvrII CCTAGG 1 cut(s) 544
BaeGI GKGCMC 2 cut(s) 52, 293
BamHI GGATCC 1 cut(s) 540
BbsI GAAGAC 1 cut(s) 183
Bbv12I GWGCWC 1 cut(s) 293
BbvI GCAGC 1 cut(s) 226
BccI CCATC 3 cut(s) 61, 170, 682
BceAI ACGGC 3 cut(s) 133, 199, 644
BcgI CGANNNNNNTGC 2 cut(s) 29, 63
BcnI CCSGG 3 cut(s) 96, 270, 696
BcoDI GTCTC 1 cut(s) 250
BfaI CTAG 2 cut(s) 353, 545
BfuAI ACCTGC 1 cut(s) 177
BisI GCNGC 2 cut(s) 240, 461
BlnI CCTAGG 1 cut(s) 544
BlsI GCNGC 2 cut(s) 241, 462
Bme1390I CCNGG 3 cut(s) 96, 270, 696
Bme18I GGWCC 3 cut(s) 98, 484, 570
BmeRI GACNNNNNGTC 1 cut(s) 187
BmeT110I CYCGRG 1 cut(s) 362
BmgT120I GGNCC 3 cut(s) 98, 484, 570
BmiI GGNNCC 3 cut(s) 99, 542, 572
BmrFI CCNGG 3 cut(s) 96, 270, 696
BmsI GCATC 2 cut(s) 74, 382
BpiI GAAGAC 1 cut(s) 183
Bpu14I TTCGAA 1 cut(s) 622
BpuEI CTTGAG 1 cut(s) 188
BpuMI CCSGG 3 cut(s) 96, 270, 696
Bsa29I ATCGAT 1 cut(s) 437
BsaJI CCNNGG 3 cut(s) 400, 544, 695
Bsc4I CCNNNNNNNGG 4 cut(s) 110, 415, 481, 694
BseCI ATCGAT 1 cut(s) 437
BseDI CCNNGG 3 cut(s) 400, 544, 695
BseGI GGATG 2 cut(s) 53, 229
BseLI CCNNNNNNNGG 4 cut(s) 110, 415, 481, 694
BseMII CTCAG 1 cut(s) 329
BseRI GAGGAG 1 cut(s) 431
BseSI GKGCMC 2 cut(s) 52, 293
BseXI GCAGC 1 cut(s) 226
BsgI GTGCAG 1 cut(s) 299
BshFI GGCC 1 cut(s) 428
BshVI ATCGAT 1 cut(s) 437
BsiHKAI GWGCWC 1 cut(s) 293
BsiHKCI CYCGRG 1 cut(s) 362
BsiSI CCGG 3 cut(s) 95, 269, 695
BslFI GGGAC 2 cut(s) 285, 556
BslI CCNNNNNNNGG 4 cut(s) 110, 415, 481, 694
BsmAI GTCTC 1 cut(s) 250
BsmFI GGGAC 2 cut(s) 285, 556
BsmI GAATGC 1 cut(s) 395
BsnI GGCC 1 cut(s) 428
BsoBI CYCGRG 1 cut(s) 362
Bsp119I TTCGAA 1 cut(s) 622
Bsp1286I GDGCHC 2 cut(s) 52, 293
Bsp143I GATC 5 cut(s) 8, 132, 163, 516, 540
Bsp19I CCATGG 1 cut(s) 400
BspACI CCGC 2 cut(s) 367, 461
BspANI GGCC 1 cut(s) 428
BspCNI CTCAG 1 cut(s) 330
BspDI ATCGAT 1 cut(s) 437
BspLI GGNNCC 3 cut(s) 99, 542, 572
BspMI ACCTGC 1 cut(s) 177
BspPI GGATC 5 cut(s) 3, 158, 524, 535, 548
BspT104I TTCGAA 1 cut(s) 622
BsrBI CCGCTC 1 cut(s) 367
BssECI CCNNGG 3 cut(s) 400, 544, 695
BssMI GATC 5 cut(s) 8, 132, 163, 516, 540
BssT1I CCWWGG 2 cut(s) 400, 544
Bst6I CTCTTC 4 cut(s) 213, 248, 494, 695
BstBI TTCGAA 1 cut(s) 622
BstC8I GCNNGC 2 cut(s) 465, 732
BstDEI CTNAG 2 cut(s) 195, 338
BstDSI CCRYGG 1 cut(s) 400
BstF5I GGATG 2 cut(s) 53, 229
BstHHI GCGC 1 cut(s) 244
BstKTI GATC 5 cut(s) 11, 135, 166, 519, 543
BstMAI GTCTC 1 cut(s) 250
BstMBI GATC 5 cut(s) 8, 132, 163, 516, 540
BstNSI RCATGY 2 cut(s) 263, 278
BstSCI CCNGG 3 cut(s) 94, 268, 694
BstSLI GKGCMC 2 cut(s) 52, 293
BstV1I GCAGC 1 cut(s) 226
BstV2I GAAGAC 1 cut(s) 183
BstX2I RGATCY 3 cut(s) 8, 516, 540
BstYI RGATCY 3 cut(s) 8, 516, 540
Bsu15I ATCGAT 1 cut(s) 437
BsuRI GGCC 1 cut(s) 428
BsuTUI ATCGAT 1 cut(s) 437
BtgI CCRYGG 1 cut(s) 400
BtsCI GGATG 2 cut(s) 53, 229
BveI ACCTGC 1 cut(s) 177
Cac8I GCNNGC 2 cut(s) 465, 732
CfoI GCGC 1 cut(s) 244
Cfr13I GGNCC 3 cut(s) 98, 484, 570
ClaI ATCGAT 1 cut(s) 437
Csp6I GTAC 3 cut(s) 37, 125, 283
CviAII CATG 5 cut(s) 13, 260, 275, 401, 476
CviJI RGCY 9 cut(s) 239, 408, 428, 467, 649, 661, 687, 694, 734
CviKI_1 RGCY 9 cut(s) 239, 408, 428, 467, 649, 661, 687, 694, 734
CviQI GTAC 3 cut(s) 37, 125, 283
DdeI CTNAG 2 cut(s) 195, 338
DpnI GATC 5 cut(s) 10, 134, 165, 518, 542
DpnII GATC 5 cut(s) 8, 132, 163, 516, 540
DrdI GACNNNNNNGTC 1 cut(s) 491
DriI GACNNNNNGTC 1 cut(s) 187
DseDI GACNNNNNNGTC 1 cut(s) 491
EaeI YGGCCR 1 cut(s) 426
Eam1104I CTCTTC 4 cut(s) 213, 248, 494, 695
Eam1105I GACNNNNNGTC 1 cut(s) 187
EarI CTCTTC 4 cut(s) 213, 248, 494, 695
Eco130I CCWWGG 2 cut(s) 400, 544
Eco47I GGWCC 3 cut(s) 98, 484, 570
Eco88I CYCGRG 1 cut(s) 362
EcoO109I RGGNCCY 2 cut(s) 98, 484
EcoT14I CCWWGG 2 cut(s) 400, 544
EcoT22I ATGCAT 2 cut(s) 18, 397
ErhI CCWWGG 2 cut(s) 400, 544
FaeI CATG 5 cut(s) 16, 263, 278, 404, 479
FaiI YATR 9 cut(s) 14, 21, 62, 261, 276, 402, 413, 477, 593
FalI AAGNNNNNCTT 2 cut(s) 473, 505
FaqI GGGAC 2 cut(s) 285, 556
FatI CATG 5 cut(s) 12, 259, 274, 400, 475
Fnu4HI GCNGC 2 cut(s) 240, 461
FokI GGATG 2 cut(s) 40, 236
Fsp4HI GCNGC 2 cut(s) 240, 461
FspBI CTAG 2 cut(s) 353, 545
GlaI GCGC 1 cut(s) 243
GluI GCNGC 2 cut(s) 240, 461
HaeIII GGCC 1 cut(s) 428
HapII CCGG 3 cut(s) 95, 269, 695
HhaI GCGC 1 cut(s) 244
Hin1II CATG 5 cut(s) 16, 263, 278, 404, 479
Hin6I GCGC 1 cut(s) 242
HinP1I GCGC 1 cut(s) 242
HindIII AAGCTT 1 cut(s) 732
HinfI GANTC 3 cut(s) 199, 334, 340
HpaII CCGG 3 cut(s) 95, 269, 695
HphI GGTGA 3 cut(s) 37, 191, 574
Hpy166II GTNNAC 1 cut(s) 291
Hpy188I TCNGA 3 cut(s) 132, 339, 602
Hpy188III TCNNGA 5 cut(s) 136, 205, 307, 514, 520
Hpy8I GTNNAC 1 cut(s) 291
Hpy99I CGWCG 1 cut(s) 119
HpyAV CCTTC 3 cut(s) 97, 133, 708
HpyCH4IV ACGT 1 cut(s) 46
HpyCH4V TGCA 6 cut(s) 16, 280, 291, 395, 591, 666
HpyF3I CTNAG 2 cut(s) 195, 338
HpySE526I ACGT 1 cut(s) 46
Hsp92II CATG 5 cut(s) 16, 263, 278, 404, 479
HspAI GCGC 1 cut(s) 242
Kzo9I GATC 5 cut(s) 8, 132, 163, 516, 540
LpnPI CCDG 5 cut(s) 108, 172, 282, 470, 708
Lsp1109I GCAGC 1 cut(s) 226
LweI GCATC 2 cut(s) 74, 382
MaeI CTAG 2 cut(s) 353, 545
MaeII ACGT 1 cut(s) 46
MaeIII GTNAC 1 cut(s) 179
MalI GATC 5 cut(s) 10, 134, 165, 518, 542
MbiI CCGCTC 1 cut(s) 367
MboI GATC 5 cut(s) 8, 132, 163, 516, 540
MboII GAAGA 9 cut(s) 53, 183, 230, 265, 343, 481, 517, 712, 723
MflI RGATCY 3 cut(s) 8, 516, 540
MhlI GDGCHC 2 cut(s) 52, 293
MluCI AATT 4 cut(s) 315, 509, 603, 635
MlyI GAGTC 1 cut(s) 349
Mph1103I ATGCAT 2 cut(s) 18, 397
MroXI GAANNNNTTC 2 cut(s) 509, 618
MseI TTAA 4 cut(s) 296, 318, 638, 736
MspI CCGG 3 cut(s) 95, 269, 695
MspR9I CCNGG 3 cut(s) 96, 270, 696
Mva1269I GAATGC 1 cut(s) 395
NciI CCSGG 3 cut(s) 96, 270, 696
NcoI CCATGG 1 cut(s) 400
NdeII GATC 5 cut(s) 8, 132, 163, 516, 540
NlaIII CATG 5 cut(s) 16, 263, 278, 404, 479
NlaIV GGNNCC 3 cut(s) 99, 542, 572
NmuCI GTSAC 1 cut(s) 179
NsiI ATGCAT 2 cut(s) 18, 397
NspI RCATGY 2 cut(s) 263, 278
NspV TTCGAA 1 cut(s) 622
PaeR7I CTCGAG 1 cut(s) 362
PciI ACATGT 2 cut(s) 259, 274
PcsI WCGNNNNNNNCGW 1 cut(s) 628
PctI GAATGC 1 cut(s) 395
PdmI GAANNNNTTC 2 cut(s) 509, 618
PfeI GAWTC 2 cut(s) 199, 334
PkrI GCNGC 2 cut(s) 241, 462
PleI GAGTC 1 cut(s) 348
PpsI GAGTC 1 cut(s) 348
PpuMI RGGWCCY 2 cut(s) 98, 484
PscI ACATGT 2 cut(s) 259, 274
PshBI ATTAAT 1 cut(s) 296
PsiI TTATAA 1 cut(s) 21
Psp5II RGGWCCY 2 cut(s) 98, 484
PspN4I GGNNCC 3 cut(s) 99, 542, 572
PspPI GGNCC 3 cut(s) 98, 484, 570
PspPPI RGGWCCY 2 cut(s) 98, 484
PspXI VCTCGAGB 1 cut(s) 362
PsuI RGATCY 3 cut(s) 8, 516, 540
RsaI GTAC 3 cut(s) 38, 126, 284
RsaNI GTAC 3 cut(s) 37, 125, 283
SaqAI TTAA 4 cut(s) 296, 318, 638, 736
SatI GCNGC 2 cut(s) 240, 461
Sau3AI GATC 5 cut(s) 8, 132, 163, 516, 540
Sau96I GGNCC 3 cut(s) 98, 484, 570
SchI GAGTC 1 cut(s) 349
ScrFI CCNGG 3 cut(s) 96, 270, 696
SduI GDGCHC 2 cut(s) 52, 293
SfaNI GCATC 2 cut(s) 74, 382
Sfr274I CTCGAG 1 cut(s) 362
SfuI TTCGAA 1 cut(s) 622
SinI GGWCC 3 cut(s) 98, 484, 570
SlaI CTCGAG 1 cut(s) 362
SmlI CTYRAG 2 cut(s) 203, 362
SmoI CTYRAG 2 cut(s) 203, 362
Sse9I AATT 4 cut(s) 315, 509, 603, 635
SsiI CCGC 2 cut(s) 367, 461
SspI AATATT 1 cut(s) 385
SspMI CTAG 2 cut(s) 353, 545
StyD4I CCNGG 3 cut(s) 94, 268, 694
StyI CCWWGG 2 cut(s) 400, 544
TaiI ACGT 1 cut(s) 49
TaqI TCGA 6 cut(s) 363, 390, 437, 521, 583, 622
TasI AATT 4 cut(s) 315, 509, 603, 635
TauI GCSGC 1 cut(s) 463
TfiI GAWTC 2 cut(s) 199, 334
Tru1I TTAA 4 cut(s) 296, 318, 638, 736
Tru9I TTAA 4 cut(s) 296, 318, 638, 736
TseFI GTSAC 1 cut(s) 179
TseI GCWGC 1 cut(s) 239
Tsp45I GTSAC 1 cut(s) 179
TspDTI ATGAA 3 cut(s) 240, 435, 492
TspGWI ACGGA 1 cut(s) 553
VneI GTGCAC 1 cut(s) 289
VpaK11BI GGWCC 3 cut(s) 98, 484, 570
VspI ATTAAT 1 cut(s) 296
XapI RAATTY 2 cut(s) 509, 603
XceI RCATGY 2 cut(s) 263, 278
XhoI CTCGAG 1 cut(s) 362
XmaJI CCTAGG 1 cut(s) 544
XmnI GAANNNNTTC 2 cut(s) 509, 618
XspI CTAG 2 cut(s) 353, 545
Zsp2I ATGCAT 2 cut(s) 18, 397
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.