Rmu_sc0007996.1_g000001

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007996.1
OG0000100
Physical Location & Seq
Reverse (-)
101 .. 5564
5464 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0007996.1_g000001.1.cds

Sequence Viewer

Length: 1626 bp
ctgaaggaggatagagaggaatcagaatcagaggaagaggagaatagatcagatgaagcaaagacagttccggaaggagaagaaaaaggagctgatgatcagaattgtgaaaacgaagaagataacctagaagttgaggtggctgaacaggaaacagcttcaggaaaaaacaaatgggagaaagagcttcagaaaaaggagggggagataagatatatgacagcagagaaagataatttgaagaaaaagctgaatgaaaaggaagaggaactaaggaaaatcacagaggacatgctgaatctggaggaaagaaatgctacacttgtgaccaagaatttctgccttgcatcgtcggtgaaggagttagagataaaattgaaggaatgggagcaaatgttgggcccaaagactcacacctcaacagcagctcagcagcacagctccccacctcctaactcaacagaaggaaaaaatgaattaaatgaagctgcatcccaggctgctgaaaaaacaaaaaagaaagatcaatcaactgttgaggaaggtcagtcccatgggatctgtacagtcgaaaaatctgcagaagcagcagcatctcaatctccacctcactgcacagtggcagaagaaactaaatcgacacctccatcacataaggagtcacagttccagagccccagagttcacatgctcacagtggcagaaatggatcaacaagctgacaagtgtcagataccgaaaagtcctatagttgaagaagcatttcaacttcagtatacttctgggatggaagacgtcactggccaagtcactgtcaatgtaactgacaaagtaactggccatgtatattaccatgtatatggcgaagtcagtgtccatgtaaatccggaagtcactggccatgtgaagacattggccaagtcactgcgaaagcagaaaactgaagatgaagaagaatcaagtgaagatgaggaagaaacaactaaagttgaagaagaatctaatgaagaacaagtccggggtaagaagacgaagaaggataacaagaagaaaagaagaaacagggaagaaactgaagatgaagaagaagaatctgatggagaagaagttcctgccaagaagaagaagaaaatggataaaaggaaggcaaaaaaagagagtacaaagaagaaggaagaaactgacgaggaagaagatacaaaggatgatgtagaggaaaaagtcccagggaaaaggaaaagatatgtaaaagagggttatgtgcaatatcgctgcacaatgattgcttttctgaaaacaattgcagaaaacaaaaataacctgactgaagggactttagagctgctgcagaaaactccctttgcaacgctgatagatgcattccatggagtaccaaagaccaaagaaggggcatacaaatctgactttgtgactaaatactttgacaaaaagaagaggatcaacaaggcggctgcagaggaagctttgaagaatgcattggcagaaactccagaaacaggggaagaaaaaacaaaacgggacagaaatgttgccgttttaatacttttgaaccttttcatcaaactctggaggaacaatatcttgggactatataagagtctgtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1985 PMD

Protein Analysis

541

Amino Acids

61.65

Weight (kDa)

5.21

Isoelectric Point (pI)

58.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000100)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr6g0248691
rosa_multiflora Rmu_co8124940.1_g000001 Rmu_co8378695.1_g000001 Rmu_sc0000023.1_g000005 Rmu_sc0000149.1_g000044 Rmu_sc0000195.1_g000019 Rmu_sc0000270.1_g000002 Rmu_sc0000270.1_g000003 Rmu_sc0000433.1_g000016 Rmu_sc0000493.1_g000067 Rmu_sc0000493.1_g000069 Rmu_sc0000493.1_g000070 Rmu_sc0000493.1_g000071 Rmu_sc0000532.1_g000015 Rmu_sc0000532.1_g000017 Rmu_sc0000552.1_g000004 Rmu_sc0000692.1_g000012 Rmu_sc0000733.1_g000017 Rmu_sc0000738.1_g000026 Rmu_sc0000738.1_g000027 Rmu_sc0000738.1_g000028 Rmu_sc0000738.1_g000030 Rmu_sc0000806.1_g000006 Rmu_sc0000863.1_g000026 Rmu_sc0000863.1_g000027 Rmu_sc0000863.1_g000028 Rmu_sc0000863.1_g000029 Rmu_sc0000863.1_g000030 Rmu_sc0000885.1_g000001 Rmu_sc0001168.1_g000020 Rmu_sc0001168.1_g000021 Rmu_sc0001214.1_g000031 Rmu_sc0001214.1_g000032 Rmu_sc0001239.1_g000003 Rmu_sc0001355.1_g000003 Rmu_sc0001373.1_g000008 Rmu_sc0001373.1_g000009 Rmu_sc0001373.1_g000010 Rmu_sc0001587.1_g000003 Rmu_sc0001648.1_g000020 Rmu_sc0001648.1_g000021 Rmu_sc0001648.1_g000022 Rmu_sc0001648.1_g000023 Rmu_sc0001836.1_g000052 Rmu_sc0001836.1_g000053 Rmu_sc0001913.1_g000025 Rmu_sc0001913.1_g000030 Rmu_sc0001938.1_g000005 Rmu_sc0001938.1_g000007 Rmu_sc0001977.1_g000016 Rmu_sc0001977.1_g000017 Rmu_sc0001977.1_g000018 Rmu_sc0001977.1_g000019 Rmu_sc0002080.1_g000031 Rmu_sc0002095.1_g000011 Rmu_sc0002095.1_g000012 Rmu_sc0002202.1_g000002 Rmu_sc0002202.1_g000004 Rmu_sc0002765.1_g000012 Rmu_sc0002955.1_g000003 Rmu_sc0002983.1_g000001 Rmu_sc0002983.1_g000002 Rmu_sc0002983.1_g000005 Rmu_sc0002983.1_g000006 Rmu_sc0003832.1_g000010 Rmu_sc0003880.1_g000041 Rmu_sc0003880.1_g000043 Rmu_sc0003981.1_g000011 Rmu_sc0003981.1_g000016 Rmu_sc0004118.1_g000013 Rmu_sc0004125.1_g000008 Rmu_sc0004155.1_g000007 Rmu_sc0004155.1_g000008 Rmu_sc0004155.1_g000009 Rmu_sc0004465.1_g000004 Rmu_sc0004465.1_g000005 Rmu_sc0004755.1_g000030 Rmu_sc0005014.1_g000009 Rmu_sc0005023.1_g000027 Rmu_sc0005446.1_g000019 Rmu_sc0006273.1_g000001 Rmu_sc0006948.1_g000020 Rmu_sc0007412.1_g000005 Rmu_sc0007996.1_g000001 Rmu_sc0009749.1_g000002 Rmu_sc0011497.1_g000008 Rmu_sc0011497.1_g000009 Rmu_sc0011497.1_g000010 Rmu_sc0012018.1_g000001 Rmu_sc0012347.1_g000004 Rmu_sc0012347.1_g000005 Rmu_sc0013290.1_g000001 Rmu_sc0013576.1_g000009 Rmu_sc0013576.1_g000011 Rmu_sc0014354.1_g000001 Rmu_sc0014482.1_g000006 Rmu_sc0016848.1_g000001 Rmu_sc0018723.1_g000002 Rmu_sc0018723.1_g000003 Rmu_sc0020085.1_g000001 Rmu_sc0022367.1_g000001 Rmu_sc0023661.1_g000001 Rmu_sc0030814.1_g000001 Rmu_sc0034982.1_g000001 Rmu_sc0036901.1_g000001 Rmu_ssc0000064.1_g000016 Rmu_ssc0000170.1_g000012 Rmu_ssc0000170.1_g000014 Rmu_ssc0000189.1_g000048 Rmu_ssc0000443.1_g000005
rosa_roxburghii Rroxscaffold_159G00432950 Rroxscaffold_1G00015760 Rroxscaffold_1G00015770 Rroxscaffold_1G00015780 Rroxscaffold_1G00015950 Rroxscaffold_1G00015980 Rroxscaffold_1G00018050 Rroxscaffold_1G00018060 Rroxscaffold_1G00020330 Rroxscaffold_1G00020340 Rroxscaffold_1G00020350 Rroxscaffold_1G00020370 Rroxscaffold_1G00021720 Rroxscaffold_1G00034800 Rroxscaffold_1G00036050 Rroxscaffold_1G00036060 Rroxscaffold_1G00036070 Rroxscaffold_1G00036160 Rroxscaffold_1G00036170 Rroxscaffold_1G00043200 Rroxscaffold_1G00043210 Rroxscaffold_1G00047700 Rroxscaffold_1G00055120 Rroxscaffold_1G00056300 Rroxscaffold_1G00056320 Rroxscaffold_1G00064030 Rroxscaffold_1G00064050 Rroxscaffold_1G00064110 Rroxscaffold_1G00064130 Rroxscaffold_1G00064140 Rroxscaffold_1G00069580 Rroxscaffold_1G00069590 Rroxscaffold_1G00069600 Rroxscaffold_2G00086000 Rroxscaffold_2G00095520 Rroxscaffold_2G00095530 Rroxscaffold_2G00102950 Rroxscaffold_2G00102960 Rroxscaffold_2G00102980 Rroxscaffold_2G00111430 Rroxscaffold_2G00111440 Rroxscaffold_2G00123850 Rroxscaffold_2G00123860 Rroxscaffold_2G00123870 Rroxscaffold_2G00127600 Rroxscaffold_2G00128430 Rroxscaffold_2G00128440 Rroxscaffold_2G00134550 Rroxscaffold_2G00134560 Rroxscaffold_2G00134570 Rroxscaffold_2G00150440 Rroxscaffold_2G00150450 Rroxscaffold_3G00221670 Rroxscaffold_3G00231550 Rroxscaffold_3G00231560 Rroxscaffold_3G00231580 Rroxscaffold_3G00231590 Rroxscaffold_3G00238200 Rroxscaffold_3G00238210 Rroxscaffold_3G00259430 Rroxscaffold_3G00271580 Rroxscaffold_3G00271590 Rroxscaffold_4G00277030 Rroxscaffold_4G00277050 Rroxscaffold_4G00277060 Rroxscaffold_4G00277070 Rroxscaffold_4G00293250 Rroxscaffold_4G00293260 Rroxscaffold_4G00300140 Rroxscaffold_4G00308740 Rroxscaffold_4G00309540 Rroxscaffold_4G00319500 Rroxscaffold_4G00325410 Rroxscaffold_4G00328420 Rroxscaffold_4G00329630 Rroxscaffold_5G00339100 Rroxscaffold_5G00339110 Rroxscaffold_5G00339130 Rroxscaffold_5G00349460 Rroxscaffold_5G00349470 Rroxscaffold_5G00349480 Rroxscaffold_5G00349490 Rroxscaffold_5G00349800 Rroxscaffold_5G00354000 Rroxscaffold_5G00357420 Rroxscaffold_5G00357430 Rroxscaffold_5G00366730 Rroxscaffold_5G00366740 Rroxscaffold_5G00366750 Rroxscaffold_5G00371380 Rroxscaffold_5G00371390 Rroxscaffold_5G00371410 Rroxscaffold_6G00390390 Rroxscaffold_6G00390400 Rroxscaffold_6G00390410 Rroxscaffold_6G00391800 Rroxscaffold_6G00391810 Rroxscaffold_6G00399200 Rroxscaffold_6G00403500 Rroxscaffold_6G00403510 Rroxscaffold_6G00403520 Rroxscaffold_6G00407230 Rroxscaffold_6G00411100 Rroxscaffold_6G00411700 Rroxscaffold_6G00415300 Rroxscaffold_6G00415310 Rroxscaffold_6G00422180 Rroxscaffold_6G00422200 Rroxscaffold_6G00422210 Rroxscaffold_7G00157710 Rroxscaffold_7G00157720 Rroxscaffold_7G00157740 Rroxscaffold_7G00194140 Rroxscaffold_7G00196750 Rroxscaffold_7G00197960 Rroxscaffold_7G00208750 Rroxscaffold_7G00208760 Rroxscaffold_7G00208780 Rroxscaffold_7G00213740 Rroxscaffold_7G00215180 Rroxscaffold_7G00215190 Rroxscaffold_7G00215200
rosa_rugosa Rorug03G0270600 Rorug05G0169200
rosa_samantha Rh1AG048500 Rh1AG091500 Rh1AG190900 Rh2BG351700 Rh2BG494300 Rh2BG539800 Rh3BG209100 Rh4CG136600 Rh4CG194800 Rh4CG381100 Rh5BG080500 Rh5BG083000 Rh5BG083100 Rh5BG124000 Rh5BG126200 Rh5BG131000 Rh5BG158900 Rh5BG284300 Rh5BG310800 Rh5BG437700 Rh6AG114700 Rh6AG126300 Rh6AG202500 Rh7CG009000 Rh7CG320700 Rh7CG355200 Rh7CG514200
rosa_wichuraiana Rw5G018600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 798
AccI GTMKAC 1 cut(s) 776
AccIII TCCGGA 2 cut(s) 70, 886
AciI CCGC 1 cut(s) 1469
AclWI GGATC 3 cut(s) 566, 717, 1466
AcoI YGGCCR 4 cut(s) 802, 838, 898, 915
AcsI RAATTY 1 cut(s) 334
AcuI CTGAAG 7 cut(s) 23, 144, 173, 755, 963, 1095, 1347
AcyI GRCGYC 1 cut(s) 795
AfaI GTAC 3 cut(s) 565, 1162, 1392
AfiI CCNNNNNNNGG 2 cut(s) 1407, 1517
AgsI TTSAA 7 cut(s) 241, 379, 755, 767, 992, 1489, 1570
AjnI CCWGG 2 cut(s) 495, 1225
AjuI GAANNNNNNNTTGG 4 cut(s) 1481, 1513, 1586, 1618
AloI GAACNNNNNNTCC 4 cut(s) 650, 682, 1092, 1124
AlwI GGATC 3 cut(s) 566, 717, 1466
Aor13HI TCCGGA 2 cut(s) 70, 886
AoxI GGCC 5 cut(s) 400, 802, 838, 898, 915
ApaI GGGCCC 1 cut(s) 404
ApoI RAATTY 1 cut(s) 334
ArsI GACNNNNNNTTYG 2 cut(s) 858, 890
Asp700I GAANNNNTTC 3 cut(s) 762, 1107, 1574
AspS9I GGNCC 2 cut(s) 400, 401
AsuC2I CCSGG 1 cut(s) 1019
AsuHPI GGTGA 1 cut(s) 367
BaeGI GKGCMC 1 cut(s) 404
BalI TGGCCA 4 cut(s) 804, 840, 900, 917
BanII GRGCYC 2 cut(s) 404, 677
BbsI GAAGAC 3 cut(s) 798, 914, 1034
BccI CCATC 3 cut(s) 655, 781, 1091
BceAI ACGGC 1 cut(s) 1538
BcgI CGANNNNNNTGC 2 cut(s) 560, 594
BciT130I CCWGG 2 cut(s) 497, 1227
BclI TGATCA 1 cut(s) 97
BcnI CCSGG 1 cut(s) 1019
BfaI CTAG 1 cut(s) 128
BfmI CTRYAG 4 cut(s) 579, 747, 1346, 1473
BlpI GCTNAGC 1 cut(s) 429
Bme1390I CCNGG 3 cut(s) 497, 1019, 1227
BmgT120I GGNCC 2 cut(s) 400, 401
BmiI GGNNCC 1 cut(s) 402
BmrFI CCNGG 3 cut(s) 497, 1019, 1227
BmsI GCATC 4 cut(s) 356, 500, 602, 1366
BoxI GACNNNNGTC 1 cut(s) 726
BpiI GAAGAC 3 cut(s) 798, 914, 1034
BpmI CTGGAG 3 cut(s) 323, 1494, 1609
Bpu1102I GCTNAGC 1 cut(s) 429
BpuMI CCSGG 1 cut(s) 1019
BsaHI GRCGYC 1 cut(s) 795
BsaJI CCNNGG 6 cut(s) 495, 553, 1018, 1225, 1226, 1384
BsaWI WCCGGW 2 cut(s) 70, 886
BsaXI ACNNNNNCTCC 6 cut(s) 380, 410, 650, 680, 1092, 1122
Bsc4I CCNNNNNNNGG 2 cut(s) 1407, 1517
Bse1I ACTGG 3 cut(s) 805, 841, 901
BseAI TCCGGA 2 cut(s) 70, 886
BseBI CCWGG 2 cut(s) 497, 1227
BseDI CCNNGG 6 cut(s) 495, 553, 1018, 1225, 1226, 1384
BseGI GGATG 3 cut(s) 491, 792, 1210
BseLI CCNNNNNNNGG 2 cut(s) 1407, 1517
BseMII CTCAG 1 cut(s) 443
BseNI ACTGG 3 cut(s) 805, 841, 901
BseRI GAGGAG 1 cut(s) 53
BseSI GKGCMC 1 cut(s) 404
BsgI GTGCAG 2 cut(s) 598, 1258
BshFI GGCC 5 cut(s) 402, 804, 840, 900, 917
BsiSI CCGG 3 cut(s) 71, 887, 1018
BslFI GGGAC 5 cut(s) 535, 1208, 1345, 1553, 1620
BslI CCNNNNNNNGG 2 cut(s) 1407, 1517
BsmFI GGGAC 5 cut(s) 535, 1208, 1345, 1553, 1620
BsmI GAATGC 2 cut(s) 1379, 1498
BsnI GGCC 5 cut(s) 402, 804, 840, 900, 917
Bsp120I GGGCCC 1 cut(s) 400
Bsp1286I GDGCHC 2 cut(s) 404, 677
Bsp13I TCCGGA 2 cut(s) 70, 886
Bsp1407I TGTACA 1 cut(s) 563
Bsp143I GATC 6 cut(s) 47, 97, 523, 558, 709, 1458
Bsp1720I GCTNAGC 1 cut(s) 429
Bsp19I CCATGG 2 cut(s) 553, 1384
BspACI CCGC 1 cut(s) 1469
BspANI GGCC 5 cut(s) 402, 804, 840, 900, 917
BspCNI CTCAG 1 cut(s) 442
BspEI TCCGGA 2 cut(s) 70, 886
BspLI GGNNCC 1 cut(s) 402
BspMAI CTGCAG 3 cut(s) 583, 1350, 1477
BspPI GGATC 3 cut(s) 566, 717, 1466
BsrGI TGTACA 1 cut(s) 563
BsrI ACTGG 3 cut(s) 805, 841, 901
BssECI CCNNGG 6 cut(s) 495, 553, 1018, 1225, 1226, 1384
BssMI GATC 6 cut(s) 47, 97, 523, 558, 709, 1458
BssNAI GTATAC 1 cut(s) 777
BssNI GRCGYC 1 cut(s) 795
BssT1I CCWWGG 2 cut(s) 553, 1384
Bst1107I GTATAC 1 cut(s) 777
Bst2UI CCWGG 2 cut(s) 497, 1227
Bst4CI ACNGT 7 cut(s) 67, 535, 568, 619, 666, 697, 814
Bst6I CTCTTC 3 cut(s) 30, 258, 1448
BstACI GRCGYC 1 cut(s) 795
BstAUI TGTACA 1 cut(s) 563
BstDEI CTNAG 2 cut(s) 272, 429
BstDSI CCRYGG 2 cut(s) 553, 1384
BstF5I GGATG 3 cut(s) 491, 792, 1210
BstKTI GATC 6 cut(s) 50, 100, 526, 561, 712, 1461
BstMBI GATC 6 cut(s) 47, 97, 523, 558, 709, 1458
BstMWI GCNNNNNNNGC 3 cut(s) 497, 587, 1481
BstNI CCWGG 2 cut(s) 497, 1227
BstNSI RCATGY 2 cut(s) 295, 691
BstPAI GACNNNNGTC 1 cut(s) 726
BstSCI CCNGG 3 cut(s) 495, 1017, 1225
BstSFI CTRYAG 4 cut(s) 579, 747, 1346, 1473
BstSLI GKGCMC 1 cut(s) 404
BstV2I GAAGAC 3 cut(s) 798, 914, 1034
BstX2I RGATCY 1 cut(s) 558
BstXI CCANNNNNNTGG 1 cut(s) 860
BstYI RGATCY 1 cut(s) 558
BstZ17I GTATAC 1 cut(s) 777
BsuRI GGCC 5 cut(s) 402, 804, 840, 900, 917
BtgI CCRYGG 2 cut(s) 553, 1384
BtsCI GGATG 3 cut(s) 491, 792, 1210
BtsI GCAGTG 2 cut(s) 610, 923
BtsIMutI CAGTG 8 cut(s) 610, 624, 702, 798, 810, 877, 894, 923
Cfr13I GGNCC 2 cut(s) 400, 401
Csp6I GTAC 3 cut(s) 564, 1161, 1391
CviAII CATG 8 cut(s) 292, 554, 688, 842, 854, 878, 902, 1385
CviQI GTAC 3 cut(s) 564, 1161, 1391
DdeI CTNAG 2 cut(s) 272, 429
DpnI GATC 6 cut(s) 49, 99, 525, 560, 711, 1460
DpnII GATC 6 cut(s) 47, 97, 523, 558, 709, 1458
EaeI YGGCCR 4 cut(s) 802, 838, 898, 915
Eam1104I CTCTTC 3 cut(s) 30, 258, 1448
EarI CTCTTC 3 cut(s) 30, 258, 1448
Eco130I CCWWGG 2 cut(s) 553, 1384
Eco24I GRGCYC 2 cut(s) 404, 677
Eco57I CTGAAG 7 cut(s) 23, 144, 173, 755, 963, 1095, 1347
EcoRII CCWGG 2 cut(s) 495, 1225
EcoT14I CCWWGG 2 cut(s) 553, 1384
EcoT22I ATGCAT 2 cut(s) 1381, 1498
EcoT38I GRGCYC 2 cut(s) 404, 677
ErhI CCWWGG 2 cut(s) 553, 1384
FaeI CATG 8 cut(s) 295, 557, 691, 845, 857, 881, 905, 1388
FaqI GGGAC 5 cut(s) 535, 1208, 1345, 1553, 1620
FatI CATG 8 cut(s) 291, 553, 687, 841, 853, 877, 901, 1384
FbaI TGATCA 1 cut(s) 97
FblI GTMKAC 1 cut(s) 776
FokI GGATG 3 cut(s) 478, 799, 1217
FriOI GRGCYC 2 cut(s) 404, 677
FspBI CTAG 1 cut(s) 128
GsuI CTGGAG 3 cut(s) 323, 1494, 1609
HaeIII GGCC 5 cut(s) 402, 804, 840, 900, 917
HapII CCGG 3 cut(s) 71, 887, 1018
Hin1I GRCGYC 1 cut(s) 795
Hin1II CATG 8 cut(s) 295, 557, 691, 845, 857, 881, 905, 1388
HindIII AAGCTT 1 cut(s) 1482
HinfI GANTC 9 cut(s) 20, 26, 298, 409, 659, 956, 998, 1091, 1618
HpaII CCGG 3 cut(s) 71, 887, 1018
HphI GGTGA 1 cut(s) 367
Hpy166II GTNNAC 2 cut(s) 685, 777
Hpy188I TCNGA 9 cut(s) 25, 31, 52, 102, 192, 732, 1096, 1293, 1423
Hpy188III TCNNGA 7 cut(s) 71, 162, 302, 670, 887, 1511, 1588
Hpy8I GTNNAC 2 cut(s) 685, 777
Hpy99I CGWCG 1 cut(s) 355
HpyCH4III ACNGT 7 cut(s) 67, 535, 568, 619, 666, 697, 814
HpyCH4IV ACGT 1 cut(s) 795
HpyF10VI GCNNNNNNNGC 3 cut(s) 497, 587, 1481
HpyF3I CTNAG 2 cut(s) 272, 429
HpySE526I ACGT 1 cut(s) 795
Hsp92I GRCGYC 1 cut(s) 795
Hsp92II CATG 8 cut(s) 295, 557, 691, 845, 857, 881, 905, 1388
Kpn2I TCCGGA 2 cut(s) 70, 886
Ksp22I TGATCA 1 cut(s) 97
Kzo9I GATC 6 cut(s) 47, 97, 523, 558, 709, 1458
LmnI GCTCC 3 cut(s) 89, 388, 446
LweI GCATC 4 cut(s) 356, 500, 602, 1366
MaeI CTAG 1 cut(s) 128
MaeII ACGT 1 cut(s) 795
MaeIII GTNAC 9 cut(s) 325, 660, 796, 808, 820, 832, 892, 921, 1429
MalI GATC 6 cut(s) 49, 99, 525, 560, 711, 1460
MboI GATC 6 cut(s) 47, 97, 523, 558, 709, 1458
MfeI CAATTG 1 cut(s) 1299
MflI RGATCY 1 cut(s) 558
MhlI GDGCHC 2 cut(s) 404, 677
MlsI TGGCCA 4 cut(s) 804, 840, 900, 917
MluCI AATT 6 cut(s) 103, 235, 334, 374, 476, 1299
MluNI TGGCCA 4 cut(s) 804, 840, 900, 917
MlyI GAGTC 2 cut(s) 403, 668
Mox20I TGGCCA 4 cut(s) 804, 840, 900, 917
Mph1103I ATGCAT 2 cut(s) 1381, 1498
MroI TCCGGA 2 cut(s) 70, 886
MroXI GAANNNNTTC 3 cut(s) 762, 1107, 1574
MscI TGGCCA 4 cut(s) 804, 840, 900, 917
MseI TTAA 2 cut(s) 479, 1559
MslI CAYNNNNRTG 1 cut(s) 858
Msp20I TGGCCA 4 cut(s) 804, 840, 900, 917
MspI CCGG 3 cut(s) 71, 887, 1018
MspR9I CCNGG 3 cut(s) 497, 1019, 1227
MunI CAATTG 1 cut(s) 1299
Mva1269I GAATGC 2 cut(s) 1379, 1498
MvaI CCWGG 2 cut(s) 497, 1227
MwoI GCNNNNNNNGC 3 cut(s) 497, 587, 1481
NciI CCSGG 1 cut(s) 1019
NcoI CCATGG 2 cut(s) 553, 1384
NdeII GATC 6 cut(s) 47, 97, 523, 558, 709, 1458
NlaIII CATG 8 cut(s) 295, 557, 691, 845, 857, 881, 905, 1388
NlaIV GGNNCC 1 cut(s) 402
NmuCI GTSAC 7 cut(s) 325, 660, 796, 808, 892, 921, 1429
NsiI ATGCAT 2 cut(s) 1381, 1498
NspI RCATGY 2 cut(s) 295, 691
PasI CCCWGGG 1 cut(s) 1226
PctI GAATGC 2 cut(s) 1379, 1498
PdmI GAANNNNTTC 3 cut(s) 762, 1107, 1574
PfeI GAWTC 6 cut(s) 20, 26, 298, 956, 998, 1091
PleI GAGTC 2 cut(s) 403, 667
PpsI GAGTC 2 cut(s) 403, 667
PshAI GACNNNNGTC 1 cut(s) 726
Psp6I CCWGG 2 cut(s) 495, 1225
PspGI CCWGG 2 cut(s) 495, 1225
PspN4I GGNNCC 1 cut(s) 402
PspOMI GGGCCC 1 cut(s) 400
PspPI GGNCC 2 cut(s) 400, 401
PstI CTGCAG 3 cut(s) 583, 1350, 1477
PsuI RGATCY 1 cut(s) 558
RsaI GTAC 3 cut(s) 565, 1162, 1392
RsaNI GTAC 3 cut(s) 564, 1161, 1391
RseI CAYNNNNRTG 1 cut(s) 858
SaqAI TTAA 2 cut(s) 479, 1559
Sau3AI GATC 6 cut(s) 47, 97, 523, 558, 709, 1458
Sau96I GGNCC 2 cut(s) 400, 401
SchI GAGTC 2 cut(s) 403, 668
ScrFI CCNGG 3 cut(s) 497, 1019, 1227
SduI GDGCHC 2 cut(s) 404, 677
SfaNI GCATC 4 cut(s) 356, 500, 602, 1366
SfcI CTRYAG 4 cut(s) 579, 747, 1346, 1473
SmiMI CAYNNNNRTG 1 cut(s) 858
Sse9I AATT 6 cut(s) 103, 235, 334, 374, 476, 1299
SsiI CCGC 1 cut(s) 1469
SspMI CTAG 1 cut(s) 128
StyD4I CCNGG 3 cut(s) 495, 1017, 1225
StyI CCWWGG 2 cut(s) 553, 1384
TaaI ACNGT 7 cut(s) 67, 535, 568, 619, 666, 697, 814
TaiI ACGT 1 cut(s) 798
TaqI TCGA 2 cut(s) 570, 638
TasI AATT 6 cut(s) 103, 235, 334, 374, 476, 1299
TatI WGTACW 2 cut(s) 563, 1160
TauI GCSGC 1 cut(s) 1472
TfiI GAWTC 6 cut(s) 20, 26, 298, 956, 998, 1091
Tru1I TTAA 2 cut(s) 479, 1559
Tru9I TTAA 2 cut(s) 479, 1559
TscAI CASTG 8 cut(s) 617, 624, 702, 805, 817, 877, 901, 930
TseFI GTSAC 7 cut(s) 325, 660, 796, 808, 892, 921, 1429
Tsp45I GTSAC 7 cut(s) 325, 660, 796, 808, 892, 921, 1429
TspDTI ATGAA 8 cut(s) 69, 270, 489, 498, 963, 1020, 1095, 1567
TspRI CASTG 8 cut(s) 617, 624, 702, 805, 817, 877, 901, 930
XapI RAATTY 1 cut(s) 334
XceI RCATGY 2 cut(s) 295, 691
XmiI GTMKAC 1 cut(s) 776
XmnI GAANNNNTTC 3 cut(s) 762, 1107, 1574
XspI CTAG 1 cut(s) 128
ZraI GACGTC 1 cut(s) 796
Zsp2I ATGCAT 2 cut(s) 1381, 1498
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.