Rroxscaffold_2G00095530

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0000100
Physical Location & Seq
Reverse (-)
16881955 .. 16903234
21280 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00095530.1

Sequence Viewer

Length: 1017 bp
ATGAGTGAAATAATGAAGTTACTTGTTCATGGTAAATTTGGTATATATATGGAAAGTTACCACTGTAGGTTTCCATTTTCGGAAACCCACAGTAAATTTTCTCTTTCCTCTCCCCCGATCTCTCTCTCCCTTGTTTCTGCGGGTTTCTTCTTTTTCTGTCCGGCCAATATTGGAGCGCCTCTTCCTCCTCTACGCTCTAGGGATCATGGGTCATCATACTTTCGATCAAGCACTTTCAACATCCAAAAAGGATTCACTTCCACAATCAATCCTCAACAACTCAACAGACATCATACTTTCGATCAAGCACTTTCAACATCCAAAAAGGATTCACTTCCACAATCAATCCTCAACAACTCAACAGAGTTAAATCCAGAGGATTTTCTCGATGAGTGGGCCCCGCAGGGCCACCTTGGTTTTAGGGTGAGATCTCGGGGTGGGTCCGACAATGAAGGTAAAGAAAGTAAAGAAGGTAAAAGATTCTCAAGAGCTAGCGAAGTAGAAGAAAACCACGAAGTAGCACCAAAGAGGAAAAAAAATGTGAAACCGGGACATGTGCGGTACGGGTGCACTTTAATAAGTTTCTTGAACACGATTAAAGATAACAAGCAGAATCTCGGTGCAAGAACATTAGATTTGCTCGAGCGGTCACCATTTGGAAATATTGTCGATGCATTCCATGGTGGCTACATAGAGGAGAAGTCGACCAAGAAATCGATGATTTCATTACACTACTCTGAGGCCTACGACCATGAAAATGACCTCTTCTTCTTTGGAAAGAAGAAATTCGGGATCTCGACAAGAGATATTTCAAAGATTCTAGGAATGCAAGAAAAAGGTGAGTTGGTCCCAAAGTCATCGAGGGTGCATATCGGTCAGACTTTATCCGGCGGTTTTTTTCAAACAAAGCGAGAATTAACAAGAGAGCCGTGGAGAATGCTCTGCAAGATGCGATCAAAGACAATCCAACAACAGAGGAAGGGATTGAGAAGAAGGACAAAAATGTGGCAAGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1985 PMD

Protein Analysis

338

Amino Acids

38.66

Weight (kDa)

9.77

Isoelectric Point (pI)

63.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000100)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr6g0248691
rosa_multiflora Rmu_co8124940.1_g000001 Rmu_co8378695.1_g000001 Rmu_sc0000023.1_g000005 Rmu_sc0000149.1_g000044 Rmu_sc0000195.1_g000019 Rmu_sc0000270.1_g000002 Rmu_sc0000270.1_g000003 Rmu_sc0000433.1_g000016 Rmu_sc0000493.1_g000067 Rmu_sc0000493.1_g000069 Rmu_sc0000493.1_g000070 Rmu_sc0000493.1_g000071 Rmu_sc0000532.1_g000015 Rmu_sc0000532.1_g000017 Rmu_sc0000552.1_g000004 Rmu_sc0000692.1_g000012 Rmu_sc0000733.1_g000017 Rmu_sc0000738.1_g000026 Rmu_sc0000738.1_g000027 Rmu_sc0000738.1_g000028 Rmu_sc0000738.1_g000030 Rmu_sc0000806.1_g000006 Rmu_sc0000863.1_g000026 Rmu_sc0000863.1_g000027 Rmu_sc0000863.1_g000028 Rmu_sc0000863.1_g000029 Rmu_sc0000863.1_g000030 Rmu_sc0000885.1_g000001 Rmu_sc0001168.1_g000020 Rmu_sc0001168.1_g000021 Rmu_sc0001214.1_g000031 Rmu_sc0001214.1_g000032 Rmu_sc0001239.1_g000003 Rmu_sc0001355.1_g000003 Rmu_sc0001373.1_g000008 Rmu_sc0001373.1_g000009 Rmu_sc0001373.1_g000010 Rmu_sc0001587.1_g000003 Rmu_sc0001648.1_g000020 Rmu_sc0001648.1_g000021 Rmu_sc0001648.1_g000022 Rmu_sc0001648.1_g000023 Rmu_sc0001836.1_g000052 Rmu_sc0001836.1_g000053 Rmu_sc0001913.1_g000025 Rmu_sc0001913.1_g000030 Rmu_sc0001938.1_g000005 Rmu_sc0001938.1_g000007 Rmu_sc0001977.1_g000016 Rmu_sc0001977.1_g000017 Rmu_sc0001977.1_g000018 Rmu_sc0001977.1_g000019 Rmu_sc0002080.1_g000031 Rmu_sc0002095.1_g000011 Rmu_sc0002095.1_g000012 Rmu_sc0002202.1_g000002 Rmu_sc0002202.1_g000004 Rmu_sc0002765.1_g000012 Rmu_sc0002955.1_g000003 Rmu_sc0002983.1_g000001 Rmu_sc0002983.1_g000002 Rmu_sc0002983.1_g000005 Rmu_sc0002983.1_g000006 Rmu_sc0003832.1_g000010 Rmu_sc0003880.1_g000041 Rmu_sc0003880.1_g000043 Rmu_sc0003981.1_g000011 Rmu_sc0003981.1_g000016 Rmu_sc0004118.1_g000013 Rmu_sc0004125.1_g000008 Rmu_sc0004155.1_g000007 Rmu_sc0004155.1_g000008 Rmu_sc0004155.1_g000009 Rmu_sc0004465.1_g000004 Rmu_sc0004465.1_g000005 Rmu_sc0004755.1_g000030 Rmu_sc0005014.1_g000009 Rmu_sc0005023.1_g000027 Rmu_sc0005446.1_g000019 Rmu_sc0006273.1_g000001 Rmu_sc0006948.1_g000020 Rmu_sc0007412.1_g000005 Rmu_sc0007996.1_g000001 Rmu_sc0009749.1_g000002 Rmu_sc0011497.1_g000008 Rmu_sc0011497.1_g000009 Rmu_sc0011497.1_g000010 Rmu_sc0012018.1_g000001 Rmu_sc0012347.1_g000004 Rmu_sc0012347.1_g000005 Rmu_sc0013290.1_g000001 Rmu_sc0013576.1_g000009 Rmu_sc0013576.1_g000011 Rmu_sc0014354.1_g000001 Rmu_sc0014482.1_g000006 Rmu_sc0016848.1_g000001 Rmu_sc0018723.1_g000002 Rmu_sc0018723.1_g000003 Rmu_sc0020085.1_g000001 Rmu_sc0022367.1_g000001 Rmu_sc0023661.1_g000001 Rmu_sc0030814.1_g000001 Rmu_sc0034982.1_g000001 Rmu_sc0036901.1_g000001 Rmu_ssc0000064.1_g000016 Rmu_ssc0000170.1_g000012 Rmu_ssc0000170.1_g000014 Rmu_ssc0000189.1_g000048 Rmu_ssc0000443.1_g000005
rosa_roxburghii Rroxscaffold_159G00432950 Rroxscaffold_1G00015760 Rroxscaffold_1G00015770 Rroxscaffold_1G00015780 Rroxscaffold_1G00015950 Rroxscaffold_1G00015980 Rroxscaffold_1G00018050 Rroxscaffold_1G00018060 Rroxscaffold_1G00020330 Rroxscaffold_1G00020340 Rroxscaffold_1G00020350 Rroxscaffold_1G00020370 Rroxscaffold_1G00021720 Rroxscaffold_1G00034800 Rroxscaffold_1G00036050 Rroxscaffold_1G00036060 Rroxscaffold_1G00036070 Rroxscaffold_1G00036160 Rroxscaffold_1G00036170 Rroxscaffold_1G00043200 Rroxscaffold_1G00043210 Rroxscaffold_1G00047700 Rroxscaffold_1G00055120 Rroxscaffold_1G00056300 Rroxscaffold_1G00056320 Rroxscaffold_1G00064030 Rroxscaffold_1G00064050 Rroxscaffold_1G00064110 Rroxscaffold_1G00064130 Rroxscaffold_1G00064140 Rroxscaffold_1G00069580 Rroxscaffold_1G00069590 Rroxscaffold_1G00069600 Rroxscaffold_2G00086000 Rroxscaffold_2G00095520 Rroxscaffold_2G00095530 Rroxscaffold_2G00102950 Rroxscaffold_2G00102960 Rroxscaffold_2G00102980 Rroxscaffold_2G00111430 Rroxscaffold_2G00111440 Rroxscaffold_2G00123850 Rroxscaffold_2G00123860 Rroxscaffold_2G00123870 Rroxscaffold_2G00127600 Rroxscaffold_2G00128430 Rroxscaffold_2G00128440 Rroxscaffold_2G00134550 Rroxscaffold_2G00134560 Rroxscaffold_2G00134570 Rroxscaffold_2G00150440 Rroxscaffold_2G00150450 Rroxscaffold_3G00221670 Rroxscaffold_3G00231550 Rroxscaffold_3G00231560 Rroxscaffold_3G00231580 Rroxscaffold_3G00231590 Rroxscaffold_3G00238200 Rroxscaffold_3G00238210 Rroxscaffold_3G00259430 Rroxscaffold_3G00271580 Rroxscaffold_3G00271590 Rroxscaffold_4G00277030 Rroxscaffold_4G00277050 Rroxscaffold_4G00277060 Rroxscaffold_4G00277070 Rroxscaffold_4G00293250 Rroxscaffold_4G00293260 Rroxscaffold_4G00300140 Rroxscaffold_4G00308740 Rroxscaffold_4G00309540 Rroxscaffold_4G00319500 Rroxscaffold_4G00325410 Rroxscaffold_4G00328420 Rroxscaffold_4G00329630 Rroxscaffold_5G00339100 Rroxscaffold_5G00339110 Rroxscaffold_5G00339130 Rroxscaffold_5G00349460 Rroxscaffold_5G00349470 Rroxscaffold_5G00349480 Rroxscaffold_5G00349490 Rroxscaffold_5G00349800 Rroxscaffold_5G00354000 Rroxscaffold_5G00357420 Rroxscaffold_5G00357430 Rroxscaffold_5G00366730 Rroxscaffold_5G00366740 Rroxscaffold_5G00366750 Rroxscaffold_5G00371380 Rroxscaffold_5G00371390 Rroxscaffold_5G00371410 Rroxscaffold_6G00390390 Rroxscaffold_6G00390400 Rroxscaffold_6G00390410 Rroxscaffold_6G00391800 Rroxscaffold_6G00391810 Rroxscaffold_6G00399200 Rroxscaffold_6G00403500 Rroxscaffold_6G00403510 Rroxscaffold_6G00403520 Rroxscaffold_6G00407230 Rroxscaffold_6G00411100 Rroxscaffold_6G00411700 Rroxscaffold_6G00415300 Rroxscaffold_6G00415310 Rroxscaffold_6G00422180 Rroxscaffold_6G00422200 Rroxscaffold_6G00422210 Rroxscaffold_7G00157710 Rroxscaffold_7G00157720 Rroxscaffold_7G00157740 Rroxscaffold_7G00194140 Rroxscaffold_7G00196750 Rroxscaffold_7G00197960 Rroxscaffold_7G00208750 Rroxscaffold_7G00208760 Rroxscaffold_7G00208780 Rroxscaffold_7G00213740 Rroxscaffold_7G00215180 Rroxscaffold_7G00215190 Rroxscaffold_7G00215200
rosa_rugosa Rorug03G0270600 Rorug05G0169200
rosa_samantha Rh1AG048500 Rh1AG091500 Rh1AG190900 Rh2BG351700 Rh2BG494300 Rh2BG539800 Rh3BG209100 Rh4CG136600 Rh4CG194800 Rh4CG381100 Rh5BG080500 Rh5BG083000 Rh5BG083100 Rh5BG124000 Rh5BG126200 Rh5BG131000 Rh5BG158900 Rh5BG284300 Rh5BG310800 Rh5BG437700 Rh6AG114700 Rh6AG126300 Rh6AG202500 Rh7CG009000 Rh7CG320700 Rh7CG355200 Rh7CG514200
rosa_wichuraiana Rw5G018600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 646
AccI GTMKAC 1 cut(s) 704
AciI CCGC 5 cut(s) 140, 401, 559, 646, 891
AclWI GGATC 2 cut(s) 210, 800
AcoI YGGCCR 1 cut(s) 162
AcsI RAATTY 3 cut(s) 35, 95, 785
AfaI GTAC 1 cut(s) 563
AflIII ACRYGT 1 cut(s) 553
AgsI TTSAA 5 cut(s) 238, 315, 589, 813, 902
AluBI AGCT 1 cut(s) 491
AluI AGCT 1 cut(s) 491
Alw21I GWGCWC 1 cut(s) 572
Alw44I GTGCAC 1 cut(s) 568
AlwI GGATC 2 cut(s) 210, 800
Ama87I CYCGRG 2 cut(s) 432, 641
AoxI GGCC 4 cut(s) 162, 396, 406, 741
ApaI GGGCCC 1 cut(s) 400
ApaLI GTGCAC 1 cut(s) 568
ApoI RAATTY 3 cut(s) 35, 95, 785
Asp700I GAANNNNTTC 1 cut(s) 785
AspLEI GCGC 1 cut(s) 178
AspS9I GGNCC 5 cut(s) 396, 397, 406, 441, 847
AsuC2I CCSGG 1 cut(s) 549
AsuHPI GGTGA 3 cut(s) 436, 642, 851
AsuNHI GCTAGC 1 cut(s) 491
AvaI CYCGRG 2 cut(s) 432, 641
AvaII GGWCC 2 cut(s) 441, 847
BaeGI GKGCMC 2 cut(s) 400, 572
BanII GRGCYC 1 cut(s) 400
Bbv12I GWGCWC 1 cut(s) 572
BceAI ACGGC 1 cut(s) 913
BcnI CCSGG 1 cut(s) 549
BfaI CTAG 3 cut(s) 198, 492, 821
BfmI CTRYAG 1 cut(s) 64
BfoI RGCGCY 1 cut(s) 179
BglII AGATCT 1 cut(s) 428
Bme1390I CCNGG 1 cut(s) 549
Bme18I GGWCC 2 cut(s) 441, 847
BmeT110I CYCGRG 2 cut(s) 432, 641
BmgT120I GGNCC 5 cut(s) 396, 397, 406, 441, 847
BmiI GGNNCC 4 cut(s) 398, 399, 442, 849
BmrFI CCNGG 1 cut(s) 549
BmsI GCATC 2 cut(s) 661, 939
BmtI GCTAGC 1 cut(s) 495
BpuEI CTTGAG 1 cut(s) 469
BpuMI CCSGG 1 cut(s) 549
Bsa29I ATCGAT 1 cut(s) 716
BsaJI CCNNGG 3 cut(s) 412, 679, 929
BseCI ATCGAT 1 cut(s) 716
BseDI CCNNGG 3 cut(s) 412, 679, 929
BseGI GGATG 2 cut(s) 240, 317
BseMII CTCAG 1 cut(s) 729
BseRI GAGGAG 2 cut(s) 177, 710
BseSI GKGCMC 2 cut(s) 400, 572
BshFI GGCC 4 cut(s) 164, 398, 408, 743
BshVI ATCGAT 1 cut(s) 716
BsiHKAI GWGCWC 1 cut(s) 572
BsiHKCI CYCGRG 2 cut(s) 432, 641
BsiSI CCGG 3 cut(s) 161, 548, 888
BslFI GGGAC 2 cut(s) 564, 833
BsmFI GGGAC 2 cut(s) 564, 833
BsmI GAATGC 3 cut(s) 674, 831, 942
BsnI GGCC 4 cut(s) 164, 398, 408, 743
BsoBI CYCGRG 2 cut(s) 432, 641
Bsp120I GGGCCC 1 cut(s) 396
Bsp1286I GDGCHC 2 cut(s) 400, 572
Bsp143I GATC 7 cut(s) 117, 202, 224, 301, 428, 792, 953
Bsp19I CCATGG 1 cut(s) 679
BspACI CCGC 5 cut(s) 140, 401, 559, 646, 891
BspANI GGCC 4 cut(s) 164, 398, 408, 743
BspCNI CTCAG 1 cut(s) 730
BspDI ATCGAT 1 cut(s) 716
BspLI GGNNCC 4 cut(s) 398, 399, 442, 849
BspOI GCTAGC 1 cut(s) 495
BspPI GGATC 2 cut(s) 210, 800
BsrBI CCGCTC 1 cut(s) 646
BssECI CCNNGG 3 cut(s) 412, 679, 929
BssMI GATC 7 cut(s) 117, 202, 224, 301, 428, 792, 953
BssT1I CCWWGG 2 cut(s) 412, 679
Bst4CI ACNGT 2 cut(s) 65, 92
Bst6I CTCTTC 2 cut(s) 186, 770
BstC8I GCNNGC 1 cut(s) 493
BstDEI CTNAG 1 cut(s) 738
BstDSI CCRYGG 2 cut(s) 679, 929
BstEII GGTNACC 1 cut(s) 648
BstF5I GGATG 2 cut(s) 240, 317
BstH2I RGCGCY 1 cut(s) 179
BstHHI GCGC 1 cut(s) 178
BstKTI GATC 7 cut(s) 120, 205, 227, 304, 431, 795, 956
BstMBI GATC 7 cut(s) 117, 202, 224, 301, 428, 792, 953
BstNSI RCATGY 1 cut(s) 557
BstPI GGTNACC 1 cut(s) 648
BstSCI CCNGG 1 cut(s) 547
BstSFI CTRYAG 1 cut(s) 64
BstSLI GKGCMC 2 cut(s) 400, 572
BstX2I RGATCY 2 cut(s) 428, 792
BstYI RGATCY 2 cut(s) 428, 792
Bsu15I ATCGAT 1 cut(s) 716
BsuRI GGCC 4 cut(s) 164, 398, 408, 743
BsuTUI ATCGAT 1 cut(s) 716
BtgI CCRYGG 2 cut(s) 679, 929
BtsCI GGATG 2 cut(s) 240, 317
BtsIMutI CAGTG 1 cut(s) 61
Cac8I GCNNGC 1 cut(s) 493
CfoI GCGC 1 cut(s) 178
Cfr13I GGNCC 5 cut(s) 396, 397, 406, 441, 847
ClaI ATCGAT 1 cut(s) 716
Csp6I GTAC 1 cut(s) 562
CviAII CATG 5 cut(s) 29, 206, 554, 680, 752
CviJI RGCY 7 cut(s) 164, 398, 408, 491, 687, 743, 928
CviKI_1 RGCY 7 cut(s) 164, 398, 408, 491, 687, 743, 928
CviQI GTAC 1 cut(s) 562
DdeI CTNAG 1 cut(s) 738
DpnI GATC 7 cut(s) 119, 204, 226, 303, 430, 794, 955
DpnII GATC 7 cut(s) 117, 202, 224, 301, 428, 792, 953
EaeI YGGCCR 1 cut(s) 162
Eam1104I CTCTTC 2 cut(s) 186, 770
EarI CTCTTC 2 cut(s) 186, 770
Eco130I CCWWGG 2 cut(s) 412, 679
Eco147I AGGCCT 1 cut(s) 743
Eco24I GRGCYC 1 cut(s) 400
Eco47I GGWCC 2 cut(s) 441, 847
Eco88I CYCGRG 2 cut(s) 432, 641
Eco91I GGTNACC 1 cut(s) 648
EcoO109I RGGNCCY 1 cut(s) 397
EcoO65I GGTNACC 1 cut(s) 648
EcoT14I CCWWGG 2 cut(s) 412, 679
EcoT22I ATGCAT 1 cut(s) 676
EcoT38I GRGCYC 1 cut(s) 400
ErhI CCWWGG 2 cut(s) 412, 679
FaeI CATG 5 cut(s) 32, 209, 557, 683, 755
FaqI GGGAC 2 cut(s) 564, 833
FatI CATG 5 cut(s) 28, 205, 553, 679, 751
FauI CCCGC 2 cut(s) 133, 408
FblI GTMKAC 1 cut(s) 704
FokI GGATG 2 cut(s) 227, 304
FriOI GRGCYC 1 cut(s) 400
FspBI CTAG 3 cut(s) 198, 492, 821
GlaI GCGC 1 cut(s) 177
HaeII RGCGCY 1 cut(s) 179
HaeIII GGCC 4 cut(s) 164, 398, 408, 743
HapII CCGG 3 cut(s) 161, 548, 888
HhaI GCGC 1 cut(s) 178
Hin1II CATG 5 cut(s) 32, 209, 557, 683, 755
Hin6I GCGC 1 cut(s) 176
HinP1I GCGC 1 cut(s) 176
HincII GTYRAC 1 cut(s) 705
HindII GTYRAC 1 cut(s) 705
HinfI GANTC 5 cut(s) 252, 329, 480, 613, 817
HpaII CCGG 3 cut(s) 161, 548, 888
HphI GGTGA 3 cut(s) 436, 642, 851
Hpy166II GTNNAC 2 cut(s) 570, 705
Hpy188I TCNGA 4 cut(s) 82, 445, 739, 879
Hpy188III TCNNGA 6 cut(s) 374, 386, 486, 586, 790, 796
Hpy8I GTNNAC 2 cut(s) 570, 705
HpyAV CCTTC 4 cut(s) 446, 464, 973, 987
HpyCH4III ACNGT 2 cut(s) 65, 92
HpyCH4V TGCA 6 cut(s) 570, 623, 674, 829, 868, 945
HpyF3I CTNAG 1 cut(s) 738
Hsp92II CATG 5 cut(s) 32, 209, 557, 683, 755
HspAI GCGC 1 cut(s) 176
Kzo9I GATC 7 cut(s) 117, 202, 224, 301, 428, 792, 953
LmnI GCTCC 1 cut(s) 173
LpnPI CCDG 5 cut(s) 174, 387, 389, 561, 901
LweI GCATC 2 cut(s) 661, 939
MaeI CTAG 3 cut(s) 198, 492, 821
MaeIII GTNAC 3 cut(s) 18, 56, 648
MalI GATC 7 cut(s) 119, 204, 226, 303, 430, 794, 955
MbiI CCGCTC 1 cut(s) 646
MboI GATC 7 cut(s) 117, 202, 224, 301, 428, 792, 953
MboII GAAGA 7 cut(s) 139, 173, 515, 757, 760, 793, 1002
MflI RGATCY 2 cut(s) 428, 792
MhlI GDGCHC 2 cut(s) 400, 572
MluCI AATT 4 cut(s) 35, 95, 785, 914
MmeI TCCRAC 2 cut(s) 468, 991
Mph1103I ATGCAT 1 cut(s) 676
MroXI GAANNNNTTC 1 cut(s) 785
MseI TTAA 5 cut(s) 368, 575, 597, 917, 1015
MslI CAYNNNNRTG 1 cut(s) 756
MspI CCGG 3 cut(s) 161, 548, 888
MspR9I CCNGG 1 cut(s) 549
Mva1269I GAATGC 3 cut(s) 674, 831, 942
NciI CCSGG 1 cut(s) 549
NcoI CCATGG 1 cut(s) 679
NdeII GATC 7 cut(s) 117, 202, 224, 301, 428, 792, 953
NheI GCTAGC 1 cut(s) 491
NlaIII CATG 5 cut(s) 32, 209, 557, 683, 755
NlaIV GGNNCC 4 cut(s) 398, 399, 442, 849
NmuCI GTSAC 1 cut(s) 648
NsiI ATGCAT 1 cut(s) 676
NspI RCATGY 1 cut(s) 557
PaeR7I CTCGAG 1 cut(s) 641
PceI AGGCCT 1 cut(s) 743
PciI ACATGT 1 cut(s) 553
PctI GAATGC 3 cut(s) 674, 831, 942
PdmI GAANNNNTTC 1 cut(s) 785
PfeI GAWTC 5 cut(s) 252, 329, 480, 613, 817
PscI ACATGT 1 cut(s) 553
PspEI GGTNACC 1 cut(s) 648
PspN4I GGNNCC 4 cut(s) 398, 399, 442, 849
PspOMI GGGCCC 1 cut(s) 396
PspPI GGNCC 5 cut(s) 396, 397, 406, 441, 847
PspXI VCTCGAGB 1 cut(s) 641
PsuI RGATCY 2 cut(s) 428, 792
RsaI GTAC 1 cut(s) 563
RsaNI GTAC 1 cut(s) 562
RseI CAYNNNNRTG 1 cut(s) 756
SalI GTCGAC 1 cut(s) 703
SaqAI TTAA 5 cut(s) 368, 575, 597, 917, 1015
Sau3AI GATC 7 cut(s) 117, 202, 224, 301, 428, 792, 953
Sau96I GGNCC 5 cut(s) 396, 397, 406, 441, 847
ScrFI CCNGG 1 cut(s) 549
SduI GDGCHC 2 cut(s) 400, 572
SetI ASST 7 cut(s) 71, 414, 457, 475, 493, 765, 841
SfaNI GCATC 2 cut(s) 661, 939
SfcI CTRYAG 1 cut(s) 64
Sfr274I CTCGAG 1 cut(s) 641
SinI GGWCC 2 cut(s) 441, 847
SlaI CTCGAG 1 cut(s) 641
SmiMI CAYNNNNRTG 1 cut(s) 756
SmlI CTYRAG 2 cut(s) 484, 641
SmoI CTYRAG 2 cut(s) 484, 641
Sse9I AATT 4 cut(s) 35, 95, 785, 914
SseBI AGGCCT 1 cut(s) 743
SsiI CCGC 5 cut(s) 140, 401, 559, 646, 891
SspI AATATT 2 cut(s) 169, 664
SspMI CTAG 3 cut(s) 198, 492, 821
StuI AGGCCT 1 cut(s) 743
StyD4I CCNGG 1 cut(s) 547
StyI CCWWGG 2 cut(s) 412, 679
TaaI ACNGT 2 cut(s) 65, 92
TaqI TCGA 9 cut(s) 223, 300, 387, 642, 669, 704, 716, 797, 860
TaqII GACCGA 1 cut(s) 863
TasI AATT 4 cut(s) 35, 95, 785, 914
TfiI GAWTC 5 cut(s) 252, 329, 480, 613, 817
Tru1I TTAA 5 cut(s) 368, 575, 597, 917, 1015
Tru9I TTAA 5 cut(s) 368, 575, 597, 917, 1015
TscAI CASTG 1 cut(s) 68
TseFI GTSAC 1 cut(s) 648
Tsp45I GTSAC 1 cut(s) 648
TspDTI ATGAA 5 cut(s) 17, 29, 465, 714, 768
TspRI CASTG 1 cut(s) 68
VneI GTGCAC 1 cut(s) 568
VpaK11BI GGWCC 2 cut(s) 441, 847
XapI RAATTY 3 cut(s) 35, 95, 785
XceI RCATGY 1 cut(s) 557
XhoI CTCGAG 1 cut(s) 641
XmiI GTMKAC 1 cut(s) 704
XmnI GAANNNNTTC 1 cut(s) 785
XspI CTAG 3 cut(s) 198, 492, 821
Zsp2I ATGCAT 1 cut(s) 676
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.