Rroxscaffold_1G00036050

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000100
Physical Location & Seq
Reverse (-)
52710803 .. 52718241
7439 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00036050.1

Sequence Viewer

Length: 753 bp
ATGGAGGATGTGTTATTGGAAAATGAGGTGCTGAAAATTGAGAAAGCCTCAATGATTGAAAGAGGGAAAATTGGCGAACGAGGCGAAGAGAAGGATGATGTGTTAATGGAAAATGAGGTGCTGAAAGTTGAGAGAGCCTCACCGATTAAAAGAGTGAAGCAATTGGAGGGCATAGTGATGGCACTAAGCGAGAAGTATGAGTCTCCAATAGCACGTCCGGCAAGCGCATCCGAGATGACATCGCAGAACGACTCTACCAACCGAGGACATCGGTCACCACTTGAATGCCTTGCCCAAGTAGCTGCACAAATTCATTCACCAACCTCTCCCGAGGTTAAATTGAGAATGGCGGAAGATGCTTGCACACCGAATACTACTTGGGTTAATGCATTGTTTGTGTTTCCACCTCCGGCTCGTTACAAACGCCACCTCCAAGAAAAGTCCGTTTGGAAGATATGCAAGCGAGCCACAAAAGTATCGGATCATTATATCACCGAAGAACAAACAGAAAAAAATGAAATTGAAGTGATAGATTGGCAAAAGCTACAACTGTACAACCTACTTGACAAGCCAAATAAAAGCAAAGTAGAGAAGTACGGAACAAGGCGAACAAAGTTGTATCCCGGCGCCAGGACACCTGCACCGACATTGAGGCGAAAGCCAGCAAACCCGACTAATCCACCGCACCGCGACGCACGAACCCAAAGGGTCCCTCAAATCGGCCGGGGGATTGAGCCGGAATTCGAACGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

250

Amino Acids

28.63

Weight (kDa)

9.12

Isoelectric Point (pI)

61.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000100)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr6g0248691
rosa_multiflora Rmu_co8124940.1_g000001 Rmu_co8378695.1_g000001 Rmu_sc0000023.1_g000005 Rmu_sc0000149.1_g000044 Rmu_sc0000195.1_g000019 Rmu_sc0000270.1_g000002 Rmu_sc0000270.1_g000003 Rmu_sc0000433.1_g000016 Rmu_sc0000493.1_g000067 Rmu_sc0000493.1_g000069 Rmu_sc0000493.1_g000070 Rmu_sc0000493.1_g000071 Rmu_sc0000532.1_g000015 Rmu_sc0000532.1_g000017 Rmu_sc0000552.1_g000004 Rmu_sc0000692.1_g000012 Rmu_sc0000733.1_g000017 Rmu_sc0000738.1_g000026 Rmu_sc0000738.1_g000027 Rmu_sc0000738.1_g000028 Rmu_sc0000738.1_g000030 Rmu_sc0000806.1_g000006 Rmu_sc0000863.1_g000026 Rmu_sc0000863.1_g000027 Rmu_sc0000863.1_g000028 Rmu_sc0000863.1_g000029 Rmu_sc0000863.1_g000030 Rmu_sc0000885.1_g000001 Rmu_sc0001168.1_g000020 Rmu_sc0001168.1_g000021 Rmu_sc0001214.1_g000031 Rmu_sc0001214.1_g000032 Rmu_sc0001239.1_g000003 Rmu_sc0001355.1_g000003 Rmu_sc0001373.1_g000008 Rmu_sc0001373.1_g000009 Rmu_sc0001373.1_g000010 Rmu_sc0001587.1_g000003 Rmu_sc0001648.1_g000020 Rmu_sc0001648.1_g000021 Rmu_sc0001648.1_g000022 Rmu_sc0001648.1_g000023 Rmu_sc0001836.1_g000052 Rmu_sc0001836.1_g000053 Rmu_sc0001913.1_g000025 Rmu_sc0001913.1_g000030 Rmu_sc0001938.1_g000005 Rmu_sc0001938.1_g000007 Rmu_sc0001977.1_g000016 Rmu_sc0001977.1_g000017 Rmu_sc0001977.1_g000018 Rmu_sc0001977.1_g000019 Rmu_sc0002080.1_g000031 Rmu_sc0002095.1_g000011 Rmu_sc0002095.1_g000012 Rmu_sc0002202.1_g000002 Rmu_sc0002202.1_g000004 Rmu_sc0002765.1_g000012 Rmu_sc0002955.1_g000003 Rmu_sc0002983.1_g000001 Rmu_sc0002983.1_g000002 Rmu_sc0002983.1_g000005 Rmu_sc0002983.1_g000006 Rmu_sc0003832.1_g000010 Rmu_sc0003880.1_g000041 Rmu_sc0003880.1_g000043 Rmu_sc0003981.1_g000011 Rmu_sc0003981.1_g000016 Rmu_sc0004118.1_g000013 Rmu_sc0004125.1_g000008 Rmu_sc0004155.1_g000007 Rmu_sc0004155.1_g000008 Rmu_sc0004155.1_g000009 Rmu_sc0004465.1_g000004 Rmu_sc0004465.1_g000005 Rmu_sc0004755.1_g000030 Rmu_sc0005014.1_g000009 Rmu_sc0005023.1_g000027 Rmu_sc0005446.1_g000019 Rmu_sc0006273.1_g000001 Rmu_sc0006948.1_g000020 Rmu_sc0007412.1_g000005 Rmu_sc0007996.1_g000001 Rmu_sc0009749.1_g000002 Rmu_sc0011497.1_g000008 Rmu_sc0011497.1_g000009 Rmu_sc0011497.1_g000010 Rmu_sc0012018.1_g000001 Rmu_sc0012347.1_g000004 Rmu_sc0012347.1_g000005 Rmu_sc0013290.1_g000001 Rmu_sc0013576.1_g000009 Rmu_sc0013576.1_g000011 Rmu_sc0014354.1_g000001 Rmu_sc0014482.1_g000006 Rmu_sc0016848.1_g000001 Rmu_sc0018723.1_g000002 Rmu_sc0018723.1_g000003 Rmu_sc0020085.1_g000001 Rmu_sc0022367.1_g000001 Rmu_sc0023661.1_g000001 Rmu_sc0030814.1_g000001 Rmu_sc0034982.1_g000001 Rmu_sc0036901.1_g000001 Rmu_ssc0000064.1_g000016 Rmu_ssc0000170.1_g000012 Rmu_ssc0000170.1_g000014 Rmu_ssc0000189.1_g000048 Rmu_ssc0000443.1_g000005
rosa_roxburghii Rroxscaffold_159G00432950 Rroxscaffold_1G00015760 Rroxscaffold_1G00015770 Rroxscaffold_1G00015780 Rroxscaffold_1G00015950 Rroxscaffold_1G00015980 Rroxscaffold_1G00018050 Rroxscaffold_1G00018060 Rroxscaffold_1G00020330 Rroxscaffold_1G00020340 Rroxscaffold_1G00020350 Rroxscaffold_1G00020370 Rroxscaffold_1G00021720 Rroxscaffold_1G00034800 Rroxscaffold_1G00036050 Rroxscaffold_1G00036060 Rroxscaffold_1G00036070 Rroxscaffold_1G00036160 Rroxscaffold_1G00036170 Rroxscaffold_1G00043200 Rroxscaffold_1G00043210 Rroxscaffold_1G00047700 Rroxscaffold_1G00055120 Rroxscaffold_1G00056300 Rroxscaffold_1G00056320 Rroxscaffold_1G00064030 Rroxscaffold_1G00064050 Rroxscaffold_1G00064110 Rroxscaffold_1G00064130 Rroxscaffold_1G00064140 Rroxscaffold_1G00069580 Rroxscaffold_1G00069590 Rroxscaffold_1G00069600 Rroxscaffold_2G00086000 Rroxscaffold_2G00095520 Rroxscaffold_2G00095530 Rroxscaffold_2G00102950 Rroxscaffold_2G00102960 Rroxscaffold_2G00102980 Rroxscaffold_2G00111430 Rroxscaffold_2G00111440 Rroxscaffold_2G00123850 Rroxscaffold_2G00123860 Rroxscaffold_2G00123870 Rroxscaffold_2G00127600 Rroxscaffold_2G00128430 Rroxscaffold_2G00128440 Rroxscaffold_2G00134550 Rroxscaffold_2G00134560 Rroxscaffold_2G00134570 Rroxscaffold_2G00150440 Rroxscaffold_2G00150450 Rroxscaffold_3G00221670 Rroxscaffold_3G00231550 Rroxscaffold_3G00231560 Rroxscaffold_3G00231580 Rroxscaffold_3G00231590 Rroxscaffold_3G00238200 Rroxscaffold_3G00238210 Rroxscaffold_3G00259430 Rroxscaffold_3G00271580 Rroxscaffold_3G00271590 Rroxscaffold_4G00277030 Rroxscaffold_4G00277050 Rroxscaffold_4G00277060 Rroxscaffold_4G00277070 Rroxscaffold_4G00293250 Rroxscaffold_4G00293260 Rroxscaffold_4G00300140 Rroxscaffold_4G00308740 Rroxscaffold_4G00309540 Rroxscaffold_4G00319500 Rroxscaffold_4G00325410 Rroxscaffold_4G00328420 Rroxscaffold_4G00329630 Rroxscaffold_5G00339100 Rroxscaffold_5G00339110 Rroxscaffold_5G00339130 Rroxscaffold_5G00349460 Rroxscaffold_5G00349470 Rroxscaffold_5G00349480 Rroxscaffold_5G00349490 Rroxscaffold_5G00349800 Rroxscaffold_5G00354000 Rroxscaffold_5G00357420 Rroxscaffold_5G00357430 Rroxscaffold_5G00366730 Rroxscaffold_5G00366740 Rroxscaffold_5G00366750 Rroxscaffold_5G00371380 Rroxscaffold_5G00371390 Rroxscaffold_5G00371410 Rroxscaffold_6G00390390 Rroxscaffold_6G00390400 Rroxscaffold_6G00390410 Rroxscaffold_6G00391800 Rroxscaffold_6G00391810 Rroxscaffold_6G00399200 Rroxscaffold_6G00403500 Rroxscaffold_6G00403510 Rroxscaffold_6G00403520 Rroxscaffold_6G00407230 Rroxscaffold_6G00411100 Rroxscaffold_6G00411700 Rroxscaffold_6G00415300 Rroxscaffold_6G00415310 Rroxscaffold_6G00422180 Rroxscaffold_6G00422200 Rroxscaffold_6G00422210 Rroxscaffold_7G00157710 Rroxscaffold_7G00157720 Rroxscaffold_7G00157740 Rroxscaffold_7G00194140 Rroxscaffold_7G00196750 Rroxscaffold_7G00197960 Rroxscaffold_7G00208750 Rroxscaffold_7G00208760 Rroxscaffold_7G00208780 Rroxscaffold_7G00213740 Rroxscaffold_7G00215180 Rroxscaffold_7G00215190 Rroxscaffold_7G00215200
rosa_rugosa Rorug03G0270600 Rorug05G0169200
rosa_samantha Rh1AG048500 Rh1AG091500 Rh1AG190900 Rh2BG351700 Rh2BG494300 Rh2BG539800 Rh3BG209100 Rh4CG136600 Rh4CG194800 Rh4CG381100 Rh5BG080500 Rh5BG083000 Rh5BG083100 Rh5BG124000 Rh5BG126200 Rh5BG131000 Rh5BG158900 Rh5BG284300 Rh5BG310800 Rh5BG437700 Rh6AG114700 Rh6AG126300 Rh6AG202500 Rh7CG009000 Rh7CG320700 Rh7CG355200 Rh7CG514200
rosa_wichuraiana Rw5G018600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 646
Acc36I ACCTGC 1 cut(s) 646
AccB1I GGYRCC 1 cut(s) 626
AccII CGCG 1 cut(s) 690
AciI CCGC 3 cut(s) 350, 683, 688
AclWI GGATC 1 cut(s) 489
AcoI YGGCCR 1 cut(s) 721
AcsI RAATTY 2 cut(s) 309, 740
AcyI GRCGYC 1 cut(s) 627
AfaI GTAC 2 cut(s) 554, 596
AfiI CCNNNNNNNGG 2 cut(s) 630, 719
AgsI TTSAA 3 cut(s) 59, 284, 524
AjiI CACGTC 1 cut(s) 215
AjnI CCWGG 1 cut(s) 629
AluBI AGCT 2 cut(s) 302, 544
AluI AGCT 2 cut(s) 302, 544
Alw26I GTCTC 1 cut(s) 207
AlwI GGATC 1 cut(s) 489
Ama87I CYCGRG 1 cut(s) 329
AoxI GGCC 1 cut(s) 721
ApeKI GCWGC 1 cut(s) 302
ApoI RAATTY 2 cut(s) 309, 740
AspLEI GCGC 2 cut(s) 227, 629
AspS9I GGNCC 1 cut(s) 709
AsuC2I CCSGG 2 cut(s) 624, 725
AsuHPI GGTGA 4 cut(s) 132, 267, 309, 484
AsuII TTCGAA 1 cut(s) 744
AvaI CYCGRG 1 cut(s) 329
AvaII GGWCC 1 cut(s) 709
BaeI ACNNNNGTAYC 2 cut(s) 459, 492
BanI GGYRCC 1 cut(s) 626
BbvI GCAGC 1 cut(s) 289
BccI CCATC 1 cut(s) 172
BciT130I CCWGG 1 cut(s) 631
BciVI GTATCC 1 cut(s) 630
BcnI CCSGG 2 cut(s) 624, 725
BcoDI GTCTC 1 cut(s) 207
BfaI CTAG 1 cut(s) 751
BfoI RGCGCY 1 cut(s) 630
BfuAI ACCTGC 1 cut(s) 646
BfuI GTATCC 1 cut(s) 630
BisI GCNGC 1 cut(s) 303
BlsI GCNGC 1 cut(s) 304
Bme1390I CCNGG 3 cut(s) 624, 631, 725
Bme18I GGWCC 1 cut(s) 709
BmeT110I CYCGRG 1 cut(s) 329
BmgBI CACGTC 1 cut(s) 215
BmgT120I GGNCC 1 cut(s) 709
BmiI GGNNCC 3 cut(s) 628, 710, 711
BmrFI CCNGG 3 cut(s) 624, 631, 725
BmsI GCATC 2 cut(s) 236, 346
BoxI GACNNNNGTC 1 cut(s) 271
BplI GAGNNNNNCTC 4 cut(s) 32, 64, 122, 154
Bpu14I TTCGAA 1 cut(s) 744
BpuMI CCSGG 2 cut(s) 624, 725
BsaHI GRCGYC 1 cut(s) 627
BsaJI CCNNGG 3 cut(s) 262, 330, 724
BsaXI ACNNNNNCTCC 3 cut(s) 26, 414, 444
Bsc4I CCNNNNNNNGG 2 cut(s) 630, 719
BseBI CCWGG 1 cut(s) 631
BseDI CCNNGG 3 cut(s) 262, 330, 724
BseGI GGATG 3 cut(s) 13, 100, 227
BseLI CCNNNNNNNGG 2 cut(s) 630, 719
BseX3I CGGCCG 1 cut(s) 721
BseXI GCAGC 1 cut(s) 289
BsgI GTGCAG 2 cut(s) 288, 624
Bsh1236I CGCG 1 cut(s) 690
Bsh1285I CGRYCG 1 cut(s) 724
BshFI GGCC 1 cut(s) 723
BshNI GGYRCC 1 cut(s) 626
BsiEI CGRYCG 1 cut(s) 724
BsiHKCI CYCGRG 1 cut(s) 329
BsiSI CCGG 5 cut(s) 218, 410, 624, 724, 737
BslFI GGGAC 1 cut(s) 695
BslI CCNNNNNNNGG 2 cut(s) 630, 719
BsmAI GTCTC 1 cut(s) 207
BsmFI GGGAC 1 cut(s) 695
BsmI GAATGC 1 cut(s) 290
BsnI GGCC 1 cut(s) 723
BsoBI CYCGRG 1 cut(s) 329
Bsp119I TTCGAA 1 cut(s) 744
Bsp1407I TGTACA 1 cut(s) 552
Bsp143I GATC 1 cut(s) 481
BspACI CCGC 3 cut(s) 350, 683, 688
BspANI GGCC 1 cut(s) 723
BspFNI CGCG 1 cut(s) 690
BspLI GGNNCC 3 cut(s) 628, 710, 711
BspMI ACCTGC 1 cut(s) 646
BspPI GGATC 1 cut(s) 489
BspT104I TTCGAA 1 cut(s) 744
BspT107I GGYRCC 1 cut(s) 626
BsrGI TGTACA 1 cut(s) 552
BssECI CCNNGG 3 cut(s) 262, 330, 724
BssMI GATC 1 cut(s) 481
BssNI GRCGYC 1 cut(s) 627
Bst2UI CCWGG 1 cut(s) 631
Bst4CI ACNGT 1 cut(s) 552
Bst6I CTCTTC 1 cut(s) 81
BstACI GRCGYC 1 cut(s) 627
BstAUI TGTACA 1 cut(s) 552
BstBI TTCGAA 1 cut(s) 744
BstC8I GCNNGC 5 cut(s) 223, 361, 461, 465, 663
BstDEI CTNAG 1 cut(s) 185
BstEII GGTNACC 1 cut(s) 273
BstF5I GGATG 3 cut(s) 13, 100, 227
BstFNI CGCG 1 cut(s) 690
BstH2I RGCGCY 1 cut(s) 630
BstHHI GCGC 2 cut(s) 227, 629
BstKTI GATC 1 cut(s) 484
BstMAI GTCTC 1 cut(s) 207
BstMBI GATC 1 cut(s) 481
BstMCI CGRYCG 1 cut(s) 724
BstMWI GCNNNNNNNGC 4 cut(s) 81, 218, 299, 356
BstNI CCWGG 1 cut(s) 631
BstPAI GACNNNNGTC 1 cut(s) 271
BstPI GGTNACC 1 cut(s) 273
BstSCI CCNGG 3 cut(s) 622, 629, 723
BstUI CGCG 1 cut(s) 690
BstV1I GCAGC 1 cut(s) 289
BstZI CGGCCG 1 cut(s) 721
BsuI GTATCC 1 cut(s) 630
BsuRI GGCC 1 cut(s) 723
BtgZI GCGATG 1 cut(s) 225
BtrI CACGTC 1 cut(s) 215
BtsCI GGATG 3 cut(s) 13, 100, 227
BveI ACCTGC 1 cut(s) 646
Cac8I GCNNGC 5 cut(s) 223, 361, 461, 465, 663
CfoI GCGC 2 cut(s) 227, 629
Cfr13I GGNCC 1 cut(s) 709
CseI GACGC 1 cut(s) 701
Csp6I GTAC 2 cut(s) 553, 595
CviQI GTAC 2 cut(s) 553, 595
DdeI CTNAG 1 cut(s) 185
DinI GGCGCC 1 cut(s) 628
DpnI GATC 1 cut(s) 483
DpnII GATC 1 cut(s) 481
EaeI YGGCCR 1 cut(s) 721
EagI CGGCCG 1 cut(s) 721
Eam1104I CTCTTC 1 cut(s) 81
EarI CTCTTC 1 cut(s) 81
EciI GGCGGA 1 cut(s) 365
EclXI CGGCCG 1 cut(s) 721
Eco47I GGWCC 1 cut(s) 709
Eco52I CGGCCG 1 cut(s) 721
Eco88I CYCGRG 1 cut(s) 329
Eco91I GGTNACC 1 cut(s) 273
EcoO109I RGGNCCY 1 cut(s) 709
EcoO65I GGTNACC 1 cut(s) 273
EcoRI GAATTC 1 cut(s) 740
EcoRII CCWGG 1 cut(s) 629
EcoT22I ATGCAT 1 cut(s) 391
EgeI GGCGCC 1 cut(s) 628
EheI GGCGCC 1 cut(s) 628
FaiI YATR 4 cut(s) 173, 198, 457, 489
FaqI GGGAC 1 cut(s) 695
Fnu4HI GCNGC 1 cut(s) 303
FokI GGATG 3 cut(s) 20, 107, 214
Fsp4HI GCNGC 1 cut(s) 303
FspBI CTAG 1 cut(s) 751
GlaI GCGC 2 cut(s) 226, 628
GluI GCNGC 1 cut(s) 303
HaeII RGCGCY 1 cut(s) 630
HaeIII GGCC 1 cut(s) 723
HapII CCGG 5 cut(s) 218, 410, 624, 724, 737
HgaI GACGC 1 cut(s) 701
HhaI GCGC 2 cut(s) 227, 629
Hin1I GRCGYC 1 cut(s) 627
Hin6I GCGC 2 cut(s) 225, 627
HinP1I GCGC 2 cut(s) 225, 627
HinfI GANTC 2 cut(s) 200, 251
HpaII CCGG 5 cut(s) 218, 410, 624, 724, 737
HphI GGTGA 4 cut(s) 132, 267, 309, 484
Hpy188I TCNGA 2 cut(s) 232, 481
Hpy188III TCNNGA 1 cut(s) 329
Hpy99I CGWCG 1 cut(s) 695
HpyAV CCTTC 1 cut(s) 85
HpyCH4III ACNGT 1 cut(s) 552
HpyCH4IV ACGT 1 cut(s) 214
HpyCH4V TGCA 5 cut(s) 305, 363, 389, 459, 641
HpyF10VI GCNNNNNNNGC 4 cut(s) 81, 218, 299, 356
HpyF3I CTNAG 1 cut(s) 185
HpySE526I ACGT 1 cut(s) 214
Hsp92I GRCGYC 1 cut(s) 627
HspAI GCGC 2 cut(s) 225, 627
KasI GGCGCC 1 cut(s) 626
KflI GGGWCCC 1 cut(s) 709
Kzo9I GATC 1 cut(s) 481
LpnPI CCDG 8 cut(s) 231, 423, 616, 637, 643, 651, 675, 737
Lsp1109I GCAGC 1 cut(s) 289
LweI GCATC 2 cut(s) 236, 346
MaeI CTAG 1 cut(s) 751
MaeII ACGT 1 cut(s) 214
MaeIII GTNAC 2 cut(s) 273, 416
MalI GATC 1 cut(s) 483
MboI GATC 1 cut(s) 481
MboII GAAGA 4 cut(s) 98, 365, 463, 509
MfeI CAATTG 1 cut(s) 161
MluCI AATT 7 cut(s) 36, 69, 161, 309, 338, 519, 740
Mly113I GGCGCC 1 cut(s) 627
MlyI GAGTC 2 cut(s) 209, 245
Mph1103I ATGCAT 1 cut(s) 391
MseI TTAA 4 cut(s) 104, 147, 336, 384
MslI CAYNNNNRTG 2 cut(s) 176, 283
MspI CCGG 5 cut(s) 218, 410, 624, 724, 737
MspR9I CCNGG 3 cut(s) 624, 631, 725
MunI CAATTG 1 cut(s) 161
Mva1269I GAATGC 1 cut(s) 290
MvaI CCWGG 1 cut(s) 631
MvnI CGCG 1 cut(s) 690
MwoI GCNNNNNNNGC 4 cut(s) 81, 218, 299, 356
NarI GGCGCC 1 cut(s) 627
NciI CCSGG 2 cut(s) 624, 725
NdeII GATC 1 cut(s) 481
NlaIV GGNNCC 3 cut(s) 628, 710, 711
NmuCI GTSAC 1 cut(s) 273
NsiI ATGCAT 1 cut(s) 391
NspV TTCGAA 1 cut(s) 744
PaqCI CACCTGC 1 cut(s) 646
PctI GAATGC 1 cut(s) 290
PkrI GCNGC 1 cut(s) 304
PleI GAGTC 2 cut(s) 208, 245
PluTI GGCGCC 1 cut(s) 630
PpsI GAGTC 2 cut(s) 208, 245
PpuMI RGGWCCY 1 cut(s) 709
PshAI GACNNNNGTC 1 cut(s) 271
Psp5II RGGWCCY 1 cut(s) 709
Psp6I CCWGG 1 cut(s) 629
PspEI GGTNACC 1 cut(s) 273
PspGI CCWGG 1 cut(s) 629
PspN4I GGNNCC 3 cut(s) 628, 710, 711
PspPI GGNCC 1 cut(s) 709
PspPPI RGGWCCY 1 cut(s) 709
RsaI GTAC 2 cut(s) 554, 596
RsaNI GTAC 2 cut(s) 553, 595
RseI CAYNNNNRTG 2 cut(s) 176, 283
SaqAI TTAA 4 cut(s) 104, 147, 336, 384
SatI GCNGC 1 cut(s) 303
Sau3AI GATC 1 cut(s) 481
Sau96I GGNCC 1 cut(s) 709
SchI GAGTC 2 cut(s) 209, 245
ScrFI CCNGG 3 cut(s) 624, 631, 725
SfaNI GCATC 2 cut(s) 236, 346
SfoI GGCGCC 1 cut(s) 628
SfuI TTCGAA 1 cut(s) 744
SinI GGWCC 1 cut(s) 709
SmiMI CAYNNNNRTG 2 cut(s) 176, 283
Sse9I AATT 7 cut(s) 36, 69, 161, 309, 338, 519, 740
SsiI CCGC 3 cut(s) 350, 683, 688
SspDI GGCGCC 1 cut(s) 626
SspMI CTAG 1 cut(s) 751
StyD4I CCNGG 3 cut(s) 622, 629, 723
TaaI ACNGT 1 cut(s) 552
TaiI ACGT 1 cut(s) 217
TaqI TCGA 1 cut(s) 744
TaqII GACCGA 1 cut(s) 261
TasI AATT 7 cut(s) 36, 69, 161, 309, 338, 519, 740
TatI WGTACW 1 cut(s) 552
Tru1I TTAA 4 cut(s) 104, 147, 336, 384
Tru9I TTAA 4 cut(s) 104, 147, 336, 384
TseFI GTSAC 1 cut(s) 273
TseI GCWGC 1 cut(s) 302
Tsp45I GTSAC 1 cut(s) 273
TspDTI ATGAA 2 cut(s) 302, 531
TspGWI ACGGA 2 cut(s) 433, 612
VpaK11BI GGWCC 1 cut(s) 709
XapI RAATTY 2 cut(s) 309, 740
XspI CTAG 1 cut(s) 751
Zsp2I ATGCAT 1 cut(s) 391
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.