Rmu_sc0012347.1_g000004

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0012347.1
OG0000100
Physical Location & Seq
Forward (+)
27240 .. 29890
2651 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0012347.1_g000004.1.cds

Sequence Viewer

Length: 1389 bp
atgaaactggtcagtgatcatgtaactggtcatataactggccatgtaactgatcaatcaccatttggaaatattgtcgatgcattgcatggtggcttcatagaggagaagttagccaagaaatctgatgattttattacactcctcctacaggcctacgaccatgaaaatgacctcttcttctttggaaagaagaaattcaggatctcgacaagagatatttcaaagatcctaggaatgccggaaaaaggtgagttggtcccaaagacttctgagggggcatatcagtccgactttatccagcagtttttttcaaacacagcgagaattaacaagagagccgtggagaaaactctgcaagatgcgctcaaagagaatgcaacaacagaggaagggattgacaagaaggacaaaaatgtggcaagattaatcttgctggacttgttcatcaagtttatgttcccaaatgcaggaggaacaatttcatgggactatgtaaaagcctgcgaaaatttggataagatcggatcttatgactgggcaagggaagttggaagcttcttaaaaaagtctataaagactttgaaaaagaaaaaggagtcaagcagcccatatagtaatacagggggctgtgttctgataatactgaaaatctttgaaaacctgaaggaggatagagaggaatcagaatcagaggaagaggagaataaatcagatgaagcaaacacagttccagaaggagaggaaaaaggagctgatgatcagaattgtgaaaacgaagaagataacctagaagttgaggtggctgaacaggaaacagcttcagaaaaaaacaaatgggagaaagagcttcagaaaaaggaggaggagataagatatatgactgaagagaaagataatttgaacaaaaagctgaacgaaaaggaacaggaactaaggaaaatcacagaggacatggtgaatctggaggaaagaaatgctacacttgtgaccgagaatttctgccttgcatcatcggtgaaggagttagagataaaattgaaggaattggagcaaatgttgaggccaaagactcacacctcaacagcagctcagcagtacagctccctacctcctaactcaacagaaggaaaaaatgaattaaatgaagctgcatctaaggctgctgaaaacacagaagagaaagatcaatcgactgttgaggaaggtcagtctcatgggatctgcacagtcgaagaatctgcagaagcagtagcatctcaatctccacctcactgcatagtggcagaaaaaactaaatcgacacctccatcacataaggagtcacagttccagagccccacagtccacatgctcacagtggcagaaatggaacaacaagttgactag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1985 PMD

Protein Analysis

462

Amino Acids

52.19

Weight (kDa)

4.88

Isoelectric Point (pI)

54.35

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000100)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr6g0248691
rosa_multiflora Rmu_co8124940.1_g000001 Rmu_co8378695.1_g000001 Rmu_sc0000023.1_g000005 Rmu_sc0000149.1_g000044 Rmu_sc0000195.1_g000019 Rmu_sc0000270.1_g000002 Rmu_sc0000270.1_g000003 Rmu_sc0000433.1_g000016 Rmu_sc0000493.1_g000067 Rmu_sc0000493.1_g000069 Rmu_sc0000493.1_g000070 Rmu_sc0000493.1_g000071 Rmu_sc0000532.1_g000015 Rmu_sc0000532.1_g000017 Rmu_sc0000552.1_g000004 Rmu_sc0000692.1_g000012 Rmu_sc0000733.1_g000017 Rmu_sc0000738.1_g000026 Rmu_sc0000738.1_g000027 Rmu_sc0000738.1_g000028 Rmu_sc0000738.1_g000030 Rmu_sc0000806.1_g000006 Rmu_sc0000863.1_g000026 Rmu_sc0000863.1_g000027 Rmu_sc0000863.1_g000028 Rmu_sc0000863.1_g000029 Rmu_sc0000863.1_g000030 Rmu_sc0000885.1_g000001 Rmu_sc0001168.1_g000020 Rmu_sc0001168.1_g000021 Rmu_sc0001214.1_g000031 Rmu_sc0001214.1_g000032 Rmu_sc0001239.1_g000003 Rmu_sc0001355.1_g000003 Rmu_sc0001373.1_g000008 Rmu_sc0001373.1_g000009 Rmu_sc0001373.1_g000010 Rmu_sc0001587.1_g000003 Rmu_sc0001648.1_g000020 Rmu_sc0001648.1_g000021 Rmu_sc0001648.1_g000022 Rmu_sc0001648.1_g000023 Rmu_sc0001836.1_g000052 Rmu_sc0001836.1_g000053 Rmu_sc0001913.1_g000025 Rmu_sc0001913.1_g000030 Rmu_sc0001938.1_g000005 Rmu_sc0001938.1_g000007 Rmu_sc0001977.1_g000016 Rmu_sc0001977.1_g000017 Rmu_sc0001977.1_g000018 Rmu_sc0001977.1_g000019 Rmu_sc0002080.1_g000031 Rmu_sc0002095.1_g000011 Rmu_sc0002095.1_g000012 Rmu_sc0002202.1_g000002 Rmu_sc0002202.1_g000004 Rmu_sc0002765.1_g000012 Rmu_sc0002955.1_g000003 Rmu_sc0002983.1_g000001 Rmu_sc0002983.1_g000002 Rmu_sc0002983.1_g000005 Rmu_sc0002983.1_g000006 Rmu_sc0003832.1_g000010 Rmu_sc0003880.1_g000041 Rmu_sc0003880.1_g000043 Rmu_sc0003981.1_g000011 Rmu_sc0003981.1_g000016 Rmu_sc0004118.1_g000013 Rmu_sc0004125.1_g000008 Rmu_sc0004155.1_g000007 Rmu_sc0004155.1_g000008 Rmu_sc0004155.1_g000009 Rmu_sc0004465.1_g000004 Rmu_sc0004465.1_g000005 Rmu_sc0004755.1_g000030 Rmu_sc0005014.1_g000009 Rmu_sc0005023.1_g000027 Rmu_sc0005446.1_g000019 Rmu_sc0006273.1_g000001 Rmu_sc0006948.1_g000020 Rmu_sc0007412.1_g000005 Rmu_sc0007996.1_g000001 Rmu_sc0009749.1_g000002 Rmu_sc0011497.1_g000008 Rmu_sc0011497.1_g000009 Rmu_sc0011497.1_g000010 Rmu_sc0012018.1_g000001 Rmu_sc0012347.1_g000004 Rmu_sc0012347.1_g000005 Rmu_sc0013290.1_g000001 Rmu_sc0013576.1_g000009 Rmu_sc0013576.1_g000011 Rmu_sc0014354.1_g000001 Rmu_sc0014482.1_g000006 Rmu_sc0016848.1_g000001 Rmu_sc0018723.1_g000002 Rmu_sc0018723.1_g000003 Rmu_sc0020085.1_g000001 Rmu_sc0022367.1_g000001 Rmu_sc0023661.1_g000001 Rmu_sc0030814.1_g000001 Rmu_sc0034982.1_g000001 Rmu_sc0036901.1_g000001 Rmu_ssc0000064.1_g000016 Rmu_ssc0000170.1_g000012 Rmu_ssc0000170.1_g000014 Rmu_ssc0000189.1_g000048 Rmu_ssc0000443.1_g000005
rosa_roxburghii Rroxscaffold_159G00432950 Rroxscaffold_1G00015760 Rroxscaffold_1G00015770 Rroxscaffold_1G00015780 Rroxscaffold_1G00015950 Rroxscaffold_1G00015980 Rroxscaffold_1G00018050 Rroxscaffold_1G00018060 Rroxscaffold_1G00020330 Rroxscaffold_1G00020340 Rroxscaffold_1G00020350 Rroxscaffold_1G00020370 Rroxscaffold_1G00021720 Rroxscaffold_1G00034800 Rroxscaffold_1G00036050 Rroxscaffold_1G00036060 Rroxscaffold_1G00036070 Rroxscaffold_1G00036160 Rroxscaffold_1G00036170 Rroxscaffold_1G00043200 Rroxscaffold_1G00043210 Rroxscaffold_1G00047700 Rroxscaffold_1G00055120 Rroxscaffold_1G00056300 Rroxscaffold_1G00056320 Rroxscaffold_1G00064030 Rroxscaffold_1G00064050 Rroxscaffold_1G00064110 Rroxscaffold_1G00064130 Rroxscaffold_1G00064140 Rroxscaffold_1G00069580 Rroxscaffold_1G00069590 Rroxscaffold_1G00069600 Rroxscaffold_2G00086000 Rroxscaffold_2G00095520 Rroxscaffold_2G00095530 Rroxscaffold_2G00102950 Rroxscaffold_2G00102960 Rroxscaffold_2G00102980 Rroxscaffold_2G00111430 Rroxscaffold_2G00111440 Rroxscaffold_2G00123850 Rroxscaffold_2G00123860 Rroxscaffold_2G00123870 Rroxscaffold_2G00127600 Rroxscaffold_2G00128430 Rroxscaffold_2G00128440 Rroxscaffold_2G00134550 Rroxscaffold_2G00134560 Rroxscaffold_2G00134570 Rroxscaffold_2G00150440 Rroxscaffold_2G00150450 Rroxscaffold_3G00221670 Rroxscaffold_3G00231550 Rroxscaffold_3G00231560 Rroxscaffold_3G00231580 Rroxscaffold_3G00231590 Rroxscaffold_3G00238200 Rroxscaffold_3G00238210 Rroxscaffold_3G00259430 Rroxscaffold_3G00271580 Rroxscaffold_3G00271590 Rroxscaffold_4G00277030 Rroxscaffold_4G00277050 Rroxscaffold_4G00277060 Rroxscaffold_4G00277070 Rroxscaffold_4G00293250 Rroxscaffold_4G00293260 Rroxscaffold_4G00300140 Rroxscaffold_4G00308740 Rroxscaffold_4G00309540 Rroxscaffold_4G00319500 Rroxscaffold_4G00325410 Rroxscaffold_4G00328420 Rroxscaffold_4G00329630 Rroxscaffold_5G00339100 Rroxscaffold_5G00339110 Rroxscaffold_5G00339130 Rroxscaffold_5G00349460 Rroxscaffold_5G00349470 Rroxscaffold_5G00349480 Rroxscaffold_5G00349490 Rroxscaffold_5G00349800 Rroxscaffold_5G00354000 Rroxscaffold_5G00357420 Rroxscaffold_5G00357430 Rroxscaffold_5G00366730 Rroxscaffold_5G00366740 Rroxscaffold_5G00366750 Rroxscaffold_5G00371380 Rroxscaffold_5G00371390 Rroxscaffold_5G00371410 Rroxscaffold_6G00390390 Rroxscaffold_6G00390400 Rroxscaffold_6G00390410 Rroxscaffold_6G00391800 Rroxscaffold_6G00391810 Rroxscaffold_6G00399200 Rroxscaffold_6G00403500 Rroxscaffold_6G00403510 Rroxscaffold_6G00403520 Rroxscaffold_6G00407230 Rroxscaffold_6G00411100 Rroxscaffold_6G00411700 Rroxscaffold_6G00415300 Rroxscaffold_6G00415310 Rroxscaffold_6G00422180 Rroxscaffold_6G00422200 Rroxscaffold_6G00422210 Rroxscaffold_7G00157710 Rroxscaffold_7G00157720 Rroxscaffold_7G00157740 Rroxscaffold_7G00194140 Rroxscaffold_7G00196750 Rroxscaffold_7G00197960 Rroxscaffold_7G00208750 Rroxscaffold_7G00208760 Rroxscaffold_7G00208780 Rroxscaffold_7G00213740 Rroxscaffold_7G00215180 Rroxscaffold_7G00215190 Rroxscaffold_7G00215200
rosa_rugosa Rorug03G0270600 Rorug05G0169200
rosa_samantha Rh1AG048500 Rh1AG091500 Rh1AG190900 Rh2BG351700 Rh2BG494300 Rh2BG539800 Rh3BG209100 Rh4CG136600 Rh4CG194800 Rh4CG381100 Rh5BG080500 Rh5BG083000 Rh5BG083100 Rh5BG124000 Rh5BG126200 Rh5BG131000 Rh5BG158900 Rh5BG284300 Rh5BG310800 Rh5BG437700 Rh6AG114700 Rh6AG126300 Rh6AG202500 Rh7CG009000 Rh7CG320700 Rh7CG355200 Rh7CG514200
rosa_wichuraiana Rw5G018600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 4 cut(s) 212, 223, 535, 1229
AcoI YGGCCR 1 cut(s) 40
AcsI RAATTY 3 cut(s) 197, 511, 997
AcuI CTGAAG 4 cut(s) 686, 807, 836, 906
AfaI GTAC 1 cut(s) 1100
AfiI CCNNNNNNNGG 4 cut(s) 151, 248, 470, 670
AgsI TTSAA 6 cut(s) 225, 315, 586, 659, 904, 1042
AloI GAACNNNNNNTCC 2 cut(s) 1313, 1345
AluBI AGCT 8 cut(s) 558, 755, 821, 850, 913, 1091, 1104, 1151
AluI AGCT 8 cut(s) 558, 755, 821, 850, 913, 1091, 1104, 1151
Alw26I GTCTC 1 cut(s) 1218
AlwI GGATC 4 cut(s) 212, 223, 535, 1229
AoxI GGCC 3 cut(s) 40, 153, 1064
ApeKI GCWGC 4 cut(s) 606, 1088, 1151, 1163
ApoI RAATTY 3 cut(s) 197, 511, 997
AseI ATTAAT 1 cut(s) 428
Asp700I GAANNNNTTC 2 cut(s) 197, 481
AspA2I CCTAGG 1 cut(s) 232
AspLEI GCGC 1 cut(s) 367
AspS9I GGNCC 1 cut(s) 259
AsuHPI GGTGA 4 cut(s) 51, 263, 970, 1030
AvaII GGWCC 1 cut(s) 259
AvrII CCTAGG 1 cut(s) 232
BalI TGGCCA 1 cut(s) 42
BanII GRGCYC 1 cut(s) 1340
BbvI GCAGC 4 cut(s) 618, 1100, 1138, 1150
BccI CCATC 1 cut(s) 1318
BceAI ACGGC 1 cut(s) 326
BcgI CGANNNNNNTGC 2 cut(s) 1223, 1257
BclI TGATCA 3 cut(s) 16, 52, 760
BcoDI GTCTC 1 cut(s) 1218
BfaI CTAG 3 cut(s) 233, 791, 1387
BfmI CTRYAG 2 cut(s) 149, 1242
BisI GCNGC 4 cut(s) 607, 1089, 1152, 1164
BlnI CCTAGG 1 cut(s) 232
BlpI GCTNAGC 1 cut(s) 1092
BlsI GCNGC 4 cut(s) 608, 1090, 1153, 1165
Bme18I GGWCC 1 cut(s) 259
BmgT120I GGNCC 1 cut(s) 259
BmiI GGNNCC 1 cut(s) 261
BmrI ACTGGG 1 cut(s) 547
BmsI GCATC 5 cut(s) 70, 352, 1019, 1163, 1265
BmuI ACTGGG 1 cut(s) 547
BpmI CTGGAG 1 cut(s) 986
Bpu1102I GCTNAGC 1 cut(s) 1092
BsaJI CCNNGG 2 cut(s) 232, 342
BsaXI ACNNNNNCTCC 4 cut(s) 1043, 1073, 1313, 1343
Bsc4I CCNNNNNNNGG 4 cut(s) 151, 248, 470, 670
Bse1I ACTGG 4 cut(s) 12, 31, 43, 542
Bse3DI GCAATG 1 cut(s) 83
BseDI CCNNGG 2 cut(s) 232, 342
BseLI CCNNNNNNNGG 4 cut(s) 151, 248, 470, 670
BseMI GCAATG 1 cut(s) 83
BseMII CTCAG 2 cut(s) 264, 1106
BseNI ACTGG 4 cut(s) 12, 31, 43, 542
BseRI GAGGAG 5 cut(s) 119, 134, 716, 878, 881
BseXI GCAGC 4 cut(s) 618, 1100, 1138, 1150
BsgI GTGCAG 1 cut(s) 1210
BshFI GGCC 3 cut(s) 42, 155, 1066
BsiSI CCGG 1 cut(s) 242
BslFI GGGAC 2 cut(s) 245, 503
BslI CCNNNNNNNGG 4 cut(s) 151, 248, 470, 670
BsmAI GTCTC 1 cut(s) 1218
BsmFI GGGAC 2 cut(s) 245, 503
BsmI GAATGC 2 cut(s) 243, 382
BsnI GGCC 3 cut(s) 42, 155, 1066
Bsp1286I GDGCHC 1 cut(s) 1340
Bsp143I GATC 9 cut(s) 16, 52, 204, 228, 522, 527, 760, 1186, 1221
Bsp1720I GCTNAGC 1 cut(s) 1092
BspANI GGCC 3 cut(s) 42, 155, 1066
BspCNI CTCAG 2 cut(s) 265, 1105
BspLI GGNNCC 1 cut(s) 261
BspMAI CTGCAG 1 cut(s) 1246
BspPI GGATC 4 cut(s) 212, 223, 535, 1229
BsrDI GCAATG 1 cut(s) 83
BsrI ACTGG 4 cut(s) 12, 31, 43, 542
BssECI CCNNGG 2 cut(s) 232, 342
BssMI GATC 9 cut(s) 16, 52, 204, 228, 522, 527, 760, 1186, 1221
BssT1I CCWWGG 1 cut(s) 232
Bst4CI ACNGT 6 cut(s) 730, 1198, 1231, 1329, 1345, 1360
Bst6I CTCTTC 4 cut(s) 182, 693, 882, 1173
BstC8I GCNNGC 1 cut(s) 505
BstDEI CTNAG 4 cut(s) 273, 935, 1092, 1158
BstDSI CCRYGG 1 cut(s) 342
BstENI CCTNNNNNAGG 2 cut(s) 149, 668
BstHHI GCGC 1 cut(s) 367
BstKTI GATC 9 cut(s) 19, 55, 207, 231, 525, 530, 763, 1189, 1224
BstMAI GTCTC 1 cut(s) 1218
BstMBI GATC 9 cut(s) 16, 52, 204, 228, 522, 527, 760, 1186, 1221
BstMWI GCNNNNNNNGC 2 cut(s) 364, 1160
BstNSI RCATGY 1 cut(s) 1354
BstSFI CTRYAG 2 cut(s) 149, 1242
BstV1I GCAGC 4 cut(s) 618, 1100, 1138, 1150
BstX2I RGATCY 4 cut(s) 204, 228, 527, 1221
BstYI RGATCY 4 cut(s) 204, 228, 527, 1221
BsuRI GGCC 3 cut(s) 42, 155, 1066
BtgI CCRYGG 1 cut(s) 342
BtsI GCAGTG 1 cut(s) 1273
BtsIMutI CAGTG 3 cut(s) 19, 1273, 1365
Cac8I GCNNGC 1 cut(s) 505
CfoI GCGC 1 cut(s) 367
Cfr13I GGNCC 1 cut(s) 259
Csp6I GTAC 1 cut(s) 1099
CviAII CATG 8 cut(s) 20, 44, 89, 164, 486, 955, 1217, 1351
CviQI GTAC 1 cut(s) 1099
DdeI CTNAG 4 cut(s) 273, 935, 1092, 1158
DpnI GATC 9 cut(s) 18, 54, 206, 230, 524, 529, 762, 1188, 1223
DpnII GATC 9 cut(s) 16, 52, 204, 228, 522, 527, 760, 1186, 1221
EaeI YGGCCR 1 cut(s) 40
Eam1104I CTCTTC 4 cut(s) 182, 693, 882, 1173
EarI CTCTTC 4 cut(s) 182, 693, 882, 1173
Eco130I CCWWGG 1 cut(s) 232
Eco147I AGGCCT 1 cut(s) 155
Eco24I GRGCYC 1 cut(s) 1340
Eco47I GGWCC 1 cut(s) 259
Eco57I CTGAAG 4 cut(s) 686, 807, 836, 906
EcoNI CCTNNNNNAGG 2 cut(s) 149, 668
EcoT14I CCWWGG 1 cut(s) 232
EcoT22I ATGCAT 1 cut(s) 85
EcoT38I GRGCYC 1 cut(s) 1340
ErhI CCWWGG 1 cut(s) 232
FaeI CATG 8 cut(s) 23, 47, 92, 167, 489, 958, 1220, 1354
FaqI GGGAC 2 cut(s) 245, 503
FatI CATG 8 cut(s) 19, 43, 88, 163, 485, 954, 1216, 1350
FbaI TGATCA 3 cut(s) 16, 52, 760
Fnu4HI GCNGC 4 cut(s) 607, 1089, 1152, 1164
FriOI GRGCYC 1 cut(s) 1340
Fsp4HI GCNGC 4 cut(s) 607, 1089, 1152, 1164
FspBI CTAG 3 cut(s) 233, 791, 1387
GlaI GCGC 1 cut(s) 366
GluI GCNGC 4 cut(s) 607, 1089, 1152, 1164
GsuI CTGGAG 1 cut(s) 986
HaeIII GGCC 3 cut(s) 42, 155, 1066
HapII CCGG 1 cut(s) 242
HhaI GCGC 1 cut(s) 367
Hin1II CATG 8 cut(s) 23, 47, 92, 167, 489, 958, 1220, 1354
Hin6I GCGC 1 cut(s) 365
HinP1I GCGC 1 cut(s) 365
HincII GTYRAC 1 cut(s) 1384
HindII GTYRAC 1 cut(s) 1384
HindIII AAGCTT 1 cut(s) 556
HinfI GANTC 7 cut(s) 599, 683, 689, 961, 1072, 1238, 1322
HpaII CCGG 1 cut(s) 242
HphI GGTGA 4 cut(s) 51, 263, 970, 1030
Hpy166II GTNNAC 2 cut(s) 1348, 1384
Hpy188III TCNNGA 5 cut(s) 202, 208, 734, 965, 1333
Hpy8I GTNNAC 2 cut(s) 1348, 1384
HpyAV CCTTC 8 cut(s) 386, 400, 661, 731, 1015, 1036, 1121, 1199
HpyCH4III ACNGT 6 cut(s) 730, 1198, 1231, 1329, 1345, 1360
HpyF10VI GCNNNNNNNGC 2 cut(s) 364, 1160
HpyF3I CTNAG 4 cut(s) 273, 935, 1092, 1158
Hsp92II CATG 8 cut(s) 23, 47, 92, 167, 489, 958, 1220, 1354
HspAI GCGC 1 cut(s) 365
Ksp22I TGATCA 3 cut(s) 16, 52, 760
Kzo9I GATC 9 cut(s) 16, 52, 204, 228, 522, 527, 760, 1186, 1221
LmnI GCTCC 3 cut(s) 752, 1051, 1109
Lsp1109I GCAGC 4 cut(s) 618, 1100, 1138, 1150
LweI GCATC 5 cut(s) 70, 352, 1019, 1163, 1265
MaeI CTAG 3 cut(s) 233, 791, 1387
MaeIII GTNAC 4 cut(s) 22, 46, 988, 1323
MalI GATC 9 cut(s) 18, 54, 206, 230, 524, 529, 762, 1188, 1223
MboI GATC 9 cut(s) 16, 52, 204, 228, 522, 527, 760, 1186, 1221
MboII GAAGA 9 cut(s) 169, 172, 205, 710, 791, 794, 899, 1190, 1247
MflI RGATCY 4 cut(s) 204, 228, 527, 1221
MhlI GDGCHC 1 cut(s) 1340
MlsI TGGCCA 1 cut(s) 42
MluNI TGGCCA 1 cut(s) 42
MlyI GAGTC 3 cut(s) 608, 1066, 1331
MmeI TCCRAC 2 cut(s) 315, 532
Mox20I TGGCCA 1 cut(s) 42
Mph1103I ATGCAT 1 cut(s) 85
MroXI GAANNNNTTC 2 cut(s) 197, 481
MscI TGGCCA 1 cut(s) 42
MseI TTAA 4 cut(s) 330, 428, 563, 1142
MslI CAYNNNNRTG 1 cut(s) 168
Msp20I TGGCCA 1 cut(s) 42
MspI CCGG 1 cut(s) 242
Mva1269I GAATGC 2 cut(s) 243, 382
MwoI GCNNNNNNNGC 2 cut(s) 364, 1160
NdeII GATC 9 cut(s) 16, 52, 204, 228, 522, 527, 760, 1186, 1221
NlaIII CATG 8 cut(s) 23, 47, 92, 167, 489, 958, 1220, 1354
NlaIV GGNNCC 1 cut(s) 261
NmuCI GTSAC 2 cut(s) 988, 1323
NsiI ATGCAT 1 cut(s) 85
NspI RCATGY 1 cut(s) 1354
PceI AGGCCT 1 cut(s) 155
PctI GAATGC 2 cut(s) 243, 382
PdmI GAANNNNTTC 2 cut(s) 197, 481
PfeI GAWTC 4 cut(s) 683, 689, 961, 1238
PkrI GCNGC 4 cut(s) 608, 1090, 1153, 1165
PleI GAGTC 3 cut(s) 607, 1066, 1330
PpsI GAGTC 3 cut(s) 607, 1066, 1330
PshBI ATTAAT 1 cut(s) 428
PspN4I GGNNCC 1 cut(s) 261
PspPI GGNCC 1 cut(s) 259
PstI CTGCAG 1 cut(s) 1246
PsuI RGATCY 4 cut(s) 204, 228, 527, 1221
RsaI GTAC 1 cut(s) 1100
RsaNI GTAC 1 cut(s) 1099
RseI CAYNNNNRTG 1 cut(s) 168
SaqAI TTAA 4 cut(s) 330, 428, 563, 1142
SatI GCNGC 4 cut(s) 607, 1089, 1152, 1164
Sau3AI GATC 9 cut(s) 16, 52, 204, 228, 522, 527, 760, 1186, 1221
Sau96I GGNCC 1 cut(s) 259
SchI GAGTC 3 cut(s) 608, 1066, 1331
SduI GDGCHC 1 cut(s) 1340
SfaNI GCATC 5 cut(s) 70, 352, 1019, 1163, 1265
SfcI CTRYAG 2 cut(s) 149, 1242
SinI GGWCC 1 cut(s) 259
SmiMI CAYNNNNRTG 1 cut(s) 168
SseBI AGGCCT 1 cut(s) 155
SspI AATATT 1 cut(s) 73
SspMI CTAG 3 cut(s) 233, 791, 1387
StuI AGGCCT 1 cut(s) 155
StyI CCWWGG 1 cut(s) 232
TaaI ACNGT 6 cut(s) 730, 1198, 1231, 1329, 1345, 1360
TaqI TCGA 5 cut(s) 78, 209, 1193, 1233, 1301
TaqII GACCGA 1 cut(s) 1007
TatI WGTACW 1 cut(s) 1098
TfiI GAWTC 4 cut(s) 683, 689, 961, 1238
Tru1I TTAA 4 cut(s) 330, 428, 563, 1142
Tru9I TTAA 4 cut(s) 330, 428, 563, 1142
TscAI CASTG 3 cut(s) 19, 1280, 1365
TseFI GTSAC 2 cut(s) 988, 1323
TseI GCWGC 4 cut(s) 606, 1088, 1151, 1163
Tsp45I GTSAC 2 cut(s) 988, 1323
TspDTI ATGAA 8 cut(s) 17, 88, 180, 436, 474, 732, 1152, 1161
TspRI CASTG 3 cut(s) 19, 1280, 1365
VpaK11BI GGWCC 1 cut(s) 259
VspI ATTAAT 1 cut(s) 428
XagI CCTNNNNNAGG 2 cut(s) 149, 668
XapI RAATTY 3 cut(s) 197, 511, 997
XceI RCATGY 1 cut(s) 1354
XmaJI CCTAGG 1 cut(s) 232
XmnI GAANNNNTTC 2 cut(s) 197, 481
XspI CTAG 3 cut(s) 233, 791, 1387
Zsp2I ATGCAT 1 cut(s) 85
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.