Rroxscaffold_6G00415300

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
OG0000100
Physical Location & Seq
Forward (+)
37513912 .. 37519927
6016 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00415300.1

Sequence Viewer

Length: 852 bp
ATGATTCCTAAACTCATCTCCCCCTTCGTAATCGAATTCCCGAGTATTCAAGAATCGATTCCCGATAAGGAGCAAAAGAATACCAGGAGCGGTAGCGTCAAAACGAGTGTGGGTAGAGAGGCCGCCTTTGCTTCGTCTTCCTACCTGGTTTTGGCAAGTAACACATCGCAAGTAGAAGATTCTCAAGATGAAGCGAGAATAGGAAGAAAAACACGAAGCCGTGACAAAGAGGAAGAGAAATGTGAAACCGGGACATGTGCGGTACGGTGCACATTAATAAGTTTCTTGAACACAATTAAAGATAACAAGAAGAATCCGAGTCCAAGAACATTAGATTTGCTCGAGCGGACACCATTTGGAAATATTGTCAATGCTGTCCATGGTGGCTACATAGAAGAGAAGTCGCCCAAGAAATCGATGATTTCATTACCCTCCTACCGTAGGCCTACAACCATGAAAAGGACCTCTTATTCTTTGGAAAGAATAAATTCAGGATCTCGACAAGAGATACTTCAAAGATCCTTGGACTACCAACAAAAGGTGAGTTGGTCCCAAAGACTTCGAGGGTGCATATCAATCGACTTTGTCCAACAGTTTTTTCAAACACGGCGAGAATTAACAAGAAAGTCGTGGAGAAAGCTTTGCAAGTTGCCATCAACGACAAGCCAACAACGAGAGGAGGGGATTGAGAAGAATGACAAAAATGTGGCAAGATTAATCTTGTTGGACTTGTCAATCAAGTTTTTGTTCCCAAACGCAGGGGGAACAATTTCATGGGACTATGTCGAGCATGCGAAAATTTGGATCAGATTGGATCTTATGACTGGGCAAAGGAAGTTGGAAGCTTCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1985 PMD

Protein Analysis

283

Amino Acids

32.42

Weight (kDa)

9.7

Isoelectric Point (pI)

52.18

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000100)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr6g0248691
rosa_multiflora Rmu_co8124940.1_g000001 Rmu_co8378695.1_g000001 Rmu_sc0000023.1_g000005 Rmu_sc0000149.1_g000044 Rmu_sc0000195.1_g000019 Rmu_sc0000270.1_g000002 Rmu_sc0000270.1_g000003 Rmu_sc0000433.1_g000016 Rmu_sc0000493.1_g000067 Rmu_sc0000493.1_g000069 Rmu_sc0000493.1_g000070 Rmu_sc0000493.1_g000071 Rmu_sc0000532.1_g000015 Rmu_sc0000532.1_g000017 Rmu_sc0000552.1_g000004 Rmu_sc0000692.1_g000012 Rmu_sc0000733.1_g000017 Rmu_sc0000738.1_g000026 Rmu_sc0000738.1_g000027 Rmu_sc0000738.1_g000028 Rmu_sc0000738.1_g000030 Rmu_sc0000806.1_g000006 Rmu_sc0000863.1_g000026 Rmu_sc0000863.1_g000027 Rmu_sc0000863.1_g000028 Rmu_sc0000863.1_g000029 Rmu_sc0000863.1_g000030 Rmu_sc0000885.1_g000001 Rmu_sc0001168.1_g000020 Rmu_sc0001168.1_g000021 Rmu_sc0001214.1_g000031 Rmu_sc0001214.1_g000032 Rmu_sc0001239.1_g000003 Rmu_sc0001355.1_g000003 Rmu_sc0001373.1_g000008 Rmu_sc0001373.1_g000009 Rmu_sc0001373.1_g000010 Rmu_sc0001587.1_g000003 Rmu_sc0001648.1_g000020 Rmu_sc0001648.1_g000021 Rmu_sc0001648.1_g000022 Rmu_sc0001648.1_g000023 Rmu_sc0001836.1_g000052 Rmu_sc0001836.1_g000053 Rmu_sc0001913.1_g000025 Rmu_sc0001913.1_g000030 Rmu_sc0001938.1_g000005 Rmu_sc0001938.1_g000007 Rmu_sc0001977.1_g000016 Rmu_sc0001977.1_g000017 Rmu_sc0001977.1_g000018 Rmu_sc0001977.1_g000019 Rmu_sc0002080.1_g000031 Rmu_sc0002095.1_g000011 Rmu_sc0002095.1_g000012 Rmu_sc0002202.1_g000002 Rmu_sc0002202.1_g000004 Rmu_sc0002765.1_g000012 Rmu_sc0002955.1_g000003 Rmu_sc0002983.1_g000001 Rmu_sc0002983.1_g000002 Rmu_sc0002983.1_g000005 Rmu_sc0002983.1_g000006 Rmu_sc0003832.1_g000010 Rmu_sc0003880.1_g000041 Rmu_sc0003880.1_g000043 Rmu_sc0003981.1_g000011 Rmu_sc0003981.1_g000016 Rmu_sc0004118.1_g000013 Rmu_sc0004125.1_g000008 Rmu_sc0004155.1_g000007 Rmu_sc0004155.1_g000008 Rmu_sc0004155.1_g000009 Rmu_sc0004465.1_g000004 Rmu_sc0004465.1_g000005 Rmu_sc0004755.1_g000030 Rmu_sc0005014.1_g000009 Rmu_sc0005023.1_g000027 Rmu_sc0005446.1_g000019 Rmu_sc0006273.1_g000001 Rmu_sc0006948.1_g000020 Rmu_sc0007412.1_g000005 Rmu_sc0007996.1_g000001 Rmu_sc0009749.1_g000002 Rmu_sc0011497.1_g000008 Rmu_sc0011497.1_g000009 Rmu_sc0011497.1_g000010 Rmu_sc0012018.1_g000001 Rmu_sc0012347.1_g000004 Rmu_sc0012347.1_g000005 Rmu_sc0013290.1_g000001 Rmu_sc0013576.1_g000009 Rmu_sc0013576.1_g000011 Rmu_sc0014354.1_g000001 Rmu_sc0014482.1_g000006 Rmu_sc0016848.1_g000001 Rmu_sc0018723.1_g000002 Rmu_sc0018723.1_g000003 Rmu_sc0020085.1_g000001 Rmu_sc0022367.1_g000001 Rmu_sc0023661.1_g000001 Rmu_sc0030814.1_g000001 Rmu_sc0034982.1_g000001 Rmu_sc0036901.1_g000001 Rmu_ssc0000064.1_g000016 Rmu_ssc0000170.1_g000012 Rmu_ssc0000170.1_g000014 Rmu_ssc0000189.1_g000048 Rmu_ssc0000443.1_g000005
rosa_roxburghii Rroxscaffold_159G00432950 Rroxscaffold_1G00015760 Rroxscaffold_1G00015770 Rroxscaffold_1G00015780 Rroxscaffold_1G00015950 Rroxscaffold_1G00015980 Rroxscaffold_1G00018050 Rroxscaffold_1G00018060 Rroxscaffold_1G00020330 Rroxscaffold_1G00020340 Rroxscaffold_1G00020350 Rroxscaffold_1G00020370 Rroxscaffold_1G00021720 Rroxscaffold_1G00034800 Rroxscaffold_1G00036050 Rroxscaffold_1G00036060 Rroxscaffold_1G00036070 Rroxscaffold_1G00036160 Rroxscaffold_1G00036170 Rroxscaffold_1G00043200 Rroxscaffold_1G00043210 Rroxscaffold_1G00047700 Rroxscaffold_1G00055120 Rroxscaffold_1G00056300 Rroxscaffold_1G00056320 Rroxscaffold_1G00064030 Rroxscaffold_1G00064050 Rroxscaffold_1G00064110 Rroxscaffold_1G00064130 Rroxscaffold_1G00064140 Rroxscaffold_1G00069580 Rroxscaffold_1G00069590 Rroxscaffold_1G00069600 Rroxscaffold_2G00086000 Rroxscaffold_2G00095520 Rroxscaffold_2G00095530 Rroxscaffold_2G00102950 Rroxscaffold_2G00102960 Rroxscaffold_2G00102980 Rroxscaffold_2G00111430 Rroxscaffold_2G00111440 Rroxscaffold_2G00123850 Rroxscaffold_2G00123860 Rroxscaffold_2G00123870 Rroxscaffold_2G00127600 Rroxscaffold_2G00128430 Rroxscaffold_2G00128440 Rroxscaffold_2G00134550 Rroxscaffold_2G00134560 Rroxscaffold_2G00134570 Rroxscaffold_2G00150440 Rroxscaffold_2G00150450 Rroxscaffold_3G00221670 Rroxscaffold_3G00231550 Rroxscaffold_3G00231560 Rroxscaffold_3G00231580 Rroxscaffold_3G00231590 Rroxscaffold_3G00238200 Rroxscaffold_3G00238210 Rroxscaffold_3G00259430 Rroxscaffold_3G00271580 Rroxscaffold_3G00271590 Rroxscaffold_4G00277030 Rroxscaffold_4G00277050 Rroxscaffold_4G00277060 Rroxscaffold_4G00277070 Rroxscaffold_4G00293250 Rroxscaffold_4G00293260 Rroxscaffold_4G00300140 Rroxscaffold_4G00308740 Rroxscaffold_4G00309540 Rroxscaffold_4G00319500 Rroxscaffold_4G00325410 Rroxscaffold_4G00328420 Rroxscaffold_4G00329630 Rroxscaffold_5G00339100 Rroxscaffold_5G00339110 Rroxscaffold_5G00339130 Rroxscaffold_5G00349460 Rroxscaffold_5G00349470 Rroxscaffold_5G00349480 Rroxscaffold_5G00349490 Rroxscaffold_5G00349800 Rroxscaffold_5G00354000 Rroxscaffold_5G00357420 Rroxscaffold_5G00357430 Rroxscaffold_5G00366730 Rroxscaffold_5G00366740 Rroxscaffold_5G00366750 Rroxscaffold_5G00371380 Rroxscaffold_5G00371390 Rroxscaffold_5G00371410 Rroxscaffold_6G00390390 Rroxscaffold_6G00390400 Rroxscaffold_6G00390410 Rroxscaffold_6G00391800 Rroxscaffold_6G00391810 Rroxscaffold_6G00399200 Rroxscaffold_6G00403500 Rroxscaffold_6G00403510 Rroxscaffold_6G00403520 Rroxscaffold_6G00407230 Rroxscaffold_6G00411100 Rroxscaffold_6G00411700 Rroxscaffold_6G00415300 Rroxscaffold_6G00415310 Rroxscaffold_6G00422180 Rroxscaffold_6G00422200 Rroxscaffold_6G00422210 Rroxscaffold_7G00157710 Rroxscaffold_7G00157720 Rroxscaffold_7G00157740 Rroxscaffold_7G00194140 Rroxscaffold_7G00196750 Rroxscaffold_7G00197960 Rroxscaffold_7G00208750 Rroxscaffold_7G00208760 Rroxscaffold_7G00208780 Rroxscaffold_7G00213740 Rroxscaffold_7G00215180 Rroxscaffold_7G00215190 Rroxscaffold_7G00215200
rosa_rugosa Rorug03G0270600 Rorug05G0169200
rosa_samantha Rh1AG048500 Rh1AG091500 Rh1AG190900 Rh2BG351700 Rh2BG494300 Rh2BG539800 Rh3BG209100 Rh4CG136600 Rh4CG194800 Rh4CG381100 Rh5BG080500 Rh5BG083000 Rh5BG083100 Rh5BG124000 Rh5BG126200 Rh5BG131000 Rh5BG158900 Rh5BG284300 Rh5BG310800 Rh5BG437700 Rh6AG114700 Rh6AG126300 Rh6AG202500 Rh7CG009000 Rh7CG320700 Rh7CG355200 Rh7CG514200
rosa_wichuraiana Rw5G018600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 2 cut(s) 90, 346
AciI CCGC 4 cut(s) 90, 123, 260, 346
AclWI GGATC 4 cut(s) 502, 513, 812, 822
AcsI RAATTY 3 cut(s) 35, 487, 798
AfaI GTAC 1 cut(s) 264
AfiI CCNNNNNNNGG 5 cut(s) 151, 441, 459, 538, 758
AflIII ACRYGT 1 cut(s) 254
AgsI TTSAA 4 cut(s) 50, 289, 515, 602
AjnI CCWGG 2 cut(s) 83, 144
AjuI GAANNNNNNNTTGG 2 cut(s) 582, 614
AluBI AGCT 2 cut(s) 640, 845
AluI AGCT 2 cut(s) 640, 845
Alw21I GWGCWC 1 cut(s) 272
Alw44I GTGCAC 1 cut(s) 268
AlwI GGATC 4 cut(s) 502, 513, 812, 822
Ama87I CYCGRG 2 cut(s) 40, 341
AoxI GGCC 2 cut(s) 120, 443
ApaLI GTGCAC 1 cut(s) 268
ApoI RAATTY 3 cut(s) 35, 487, 798
AseI ATTAAT 2 cut(s) 275, 716
Asp700I GAANNNNTTC 3 cut(s) 57, 487, 769
AspS9I GGNCC 2 cut(s) 462, 549
AsuC2I CCSGG 1 cut(s) 250
AsuHPI GGTGA 1 cut(s) 553
AvaI CYCGRG 2 cut(s) 40, 341
AvaII GGWCC 2 cut(s) 462, 549
BaeGI GKGCMC 1 cut(s) 272
BbsI GAAGAC 1 cut(s) 129
Bbv12I GWGCWC 1 cut(s) 272
BccI CCATC 1 cut(s) 661
BceAI ACGGC 2 cut(s) 204, 623
BcgI CGANNNNNNTGC 2 cut(s) 559, 593
BciT130I CCWGG 2 cut(s) 85, 146
BcnI CCSGG 1 cut(s) 250
BisI GCNGC 1 cut(s) 123
BlsI GCNGC 1 cut(s) 124
Bme1390I CCNGG 3 cut(s) 85, 146, 250
Bme18I GGWCC 2 cut(s) 462, 549
BmeT110I CYCGRG 2 cut(s) 40, 341
BmgT120I GGNCC 2 cut(s) 462, 549
BmiI GGNNCC 1 cut(s) 551
BmrFI CCNGG 3 cut(s) 85, 146, 250
BmrI ACTGGG 1 cut(s) 834
BmuI ACTGGG 1 cut(s) 834
BpiI GAAGAC 1 cut(s) 129
BpuEI CTTGAG 1 cut(s) 168
BpuMI CCSGG 1 cut(s) 250
Bsa29I ATCGAT 2 cut(s) 56, 416
BsaJI CCNNGG 2 cut(s) 379, 522
Bsc4I CCNNNNNNNGG 5 cut(s) 151, 441, 459, 538, 758
Bse1I ACTGG 1 cut(s) 829
BseBI CCWGG 2 cut(s) 85, 146
BseCI ATCGAT 2 cut(s) 56, 416
BseDI CCNNGG 2 cut(s) 379, 522
BseLI CCNNNNNNNGG 5 cut(s) 151, 441, 459, 538, 758
BseNI ACTGG 1 cut(s) 829
BseRI GAGGAG 1 cut(s) 692
BseSI GKGCMC 1 cut(s) 272
BshFI GGCC 2 cut(s) 122, 445
BshVI ATCGAT 2 cut(s) 56, 416
BsiHKAI GWGCWC 1 cut(s) 272
BsiHKCI CYCGRG 2 cut(s) 40, 341
BsiSI CCGG 1 cut(s) 249
BslFI GGGAC 3 cut(s) 265, 535, 791
BslI CCNNNNNNNGG 5 cut(s) 151, 441, 459, 538, 758
BsmFI GGGAC 3 cut(s) 265, 535, 791
BsnI GGCC 2 cut(s) 122, 445
BsoBI CYCGRG 2 cut(s) 40, 341
Bsp1286I GDGCHC 1 cut(s) 272
Bsp143I GATC 4 cut(s) 494, 518, 804, 814
Bsp19I CCATGG 1 cut(s) 379
BspACI CCGC 4 cut(s) 90, 123, 260, 346
BspANI GGCC 2 cut(s) 122, 445
BspDI ATCGAT 2 cut(s) 56, 416
BspLI GGNNCC 1 cut(s) 551
BspPI GGATC 4 cut(s) 502, 513, 812, 822
BsrBI CCGCTC 2 cut(s) 90, 346
BsrI ACTGG 1 cut(s) 829
BssECI CCNNGG 2 cut(s) 379, 522
BssMI GATC 4 cut(s) 494, 518, 804, 814
BssT1I CCWWGG 2 cut(s) 379, 522
Bst2UI CCWGG 2 cut(s) 85, 146
Bst4CI ACNGT 3 cut(s) 267, 440, 594
Bst6I CTCTTC 2 cut(s) 228, 390
BstC8I GCNNGC 1 cut(s) 792
BstDSI CCRYGG 1 cut(s) 379
BstENI CCTNNNNNAGG 1 cut(s) 439
BstKTI GATC 4 cut(s) 497, 521, 807, 817
BstMBI GATC 4 cut(s) 494, 518, 804, 814
BstMWI GCNNNNNNNGC 1 cut(s) 128
BstNI CCWGG 2 cut(s) 85, 146
BstNSI RCATGY 2 cut(s) 258, 794
BstSCI CCNGG 3 cut(s) 83, 144, 248
BstSLI GKGCMC 1 cut(s) 272
BstV2I GAAGAC 1 cut(s) 129
BstX2I RGATCY 3 cut(s) 494, 518, 814
BstYI RGATCY 3 cut(s) 494, 518, 814
Bsu15I ATCGAT 2 cut(s) 56, 416
BsuRI GGCC 2 cut(s) 122, 445
BsuTUI ATCGAT 2 cut(s) 56, 416
BtgI CCRYGG 1 cut(s) 379
BtgZI GCGATG 1 cut(s) 150
Cac8I GCNNGC 1 cut(s) 792
Cfr13I GGNCC 2 cut(s) 462, 549
ClaI ATCGAT 2 cut(s) 56, 416
CseI GACGC 1 cut(s) 85
CsiI ACCWGGT 1 cut(s) 144
Csp6I GTAC 1 cut(s) 263
CviAII CATG 5 cut(s) 255, 380, 454, 774, 791
CviJI RGCY 7 cut(s) 122, 219, 387, 445, 640, 666, 845
CviKI_1 RGCY 7 cut(s) 122, 219, 387, 445, 640, 666, 845
CviQI GTAC 1 cut(s) 263
DpnI GATC 4 cut(s) 496, 520, 806, 816
DpnII GATC 4 cut(s) 494, 518, 804, 814
Eam1104I CTCTTC 2 cut(s) 228, 390
EarI CTCTTC 2 cut(s) 228, 390
Eco130I CCWWGG 2 cut(s) 379, 522
Eco147I AGGCCT 1 cut(s) 445
Eco47I GGWCC 2 cut(s) 462, 549
Eco88I CYCGRG 2 cut(s) 40, 341
EcoNI CCTNNNNNAGG 1 cut(s) 439
EcoO109I RGGNCCY 1 cut(s) 462
EcoRI GAATTC 1 cut(s) 35
EcoRII CCWGG 2 cut(s) 83, 144
EcoT14I CCWWGG 2 cut(s) 379, 522
ErhI CCWWGG 2 cut(s) 379, 522
FaeI CATG 5 cut(s) 258, 383, 457, 777, 794
FaiI YATR 9 cut(s) 256, 381, 392, 455, 572, 775, 783, 792, 821
FalI AAGNNNNNCTT 4 cut(s) 451, 483, 495, 527
FaqI GGGAC 3 cut(s) 265, 535, 791
FatI CATG 5 cut(s) 254, 379, 453, 773, 790
Fnu4HI GCNGC 1 cut(s) 123
Fsp4HI GCNGC 1 cut(s) 123
GluI GCNGC 1 cut(s) 123
HaeIII GGCC 2 cut(s) 122, 445
HapII CCGG 1 cut(s) 249
HgaI GACGC 1 cut(s) 85
Hin1II CATG 5 cut(s) 258, 383, 457, 777, 794
HindIII AAGCTT 2 cut(s) 638, 843
HinfI GANTC 6 cut(s) 4, 53, 58, 179, 313, 319
HpaII CCGG 1 cut(s) 249
HphI GGTGA 1 cut(s) 553
Hpy166II GTNNAC 1 cut(s) 270
Hpy188I TCNGA 2 cut(s) 318, 809
Hpy188III TCNNGA 7 cut(s) 40, 50, 62, 185, 286, 492, 498
Hpy8I GTNNAC 1 cut(s) 270
HpyAV CCTTC 1 cut(s) 34
HpyCH4III ACNGT 3 cut(s) 267, 440, 594
HpyCH4V TGCA 3 cut(s) 270, 570, 645
HpyF10VI GCNNNNNNNGC 1 cut(s) 128
Hsp92II CATG 5 cut(s) 258, 383, 457, 777, 794
Kzo9I GATC 4 cut(s) 494, 518, 804, 814
LmnI GCTCC 2 cut(s) 70, 87
LpnPI CCDG 8 cut(s) 70, 97, 131, 158, 262, 477, 744, 810
MabI ACCWGGT 1 cut(s) 144
MaeIII GTNAC 2 cut(s) 158, 221
MalI GATC 4 cut(s) 496, 520, 806, 816
MbiI CCGCTC 2 cut(s) 90, 346
MboI GATC 4 cut(s) 494, 518, 804, 814
MboII GAAGA 7 cut(s) 129, 188, 216, 245, 322, 407, 703
MflI RGATCY 3 cut(s) 494, 518, 814
MhlI GDGCHC 1 cut(s) 272
MluCI AATT 6 cut(s) 35, 294, 487, 614, 768, 798
MlyI GAGTC 1 cut(s) 328
MmeI TCCRAC 3 cut(s) 613, 705, 819
MnlI CCTC 7 cut(s) 112, 223, 442, 475, 557, 670, 673
MroXI GAANNNNTTC 3 cut(s) 57, 487, 769
MseI TTAA 5 cut(s) 275, 297, 617, 716, 850
MspI CCGG 1 cut(s) 249
MspR9I CCNGG 3 cut(s) 85, 146, 250
MvaI CCWGG 2 cut(s) 85, 146
MwoI GCNNNNNNNGC 1 cut(s) 128
NciI CCSGG 1 cut(s) 250
NcoI CCATGG 1 cut(s) 379
NdeII GATC 4 cut(s) 494, 518, 804, 814
NlaIII CATG 5 cut(s) 258, 383, 457, 777, 794
NlaIV GGNNCC 1 cut(s) 551
NmuCI GTSAC 1 cut(s) 221
NspI RCATGY 2 cut(s) 258, 794
PaeI GCATGC 1 cut(s) 794
PaeR7I CTCGAG 1 cut(s) 341
PceI AGGCCT 1 cut(s) 445
PciI ACATGT 1 cut(s) 254
PdmI GAANNNNTTC 3 cut(s) 57, 487, 769
PfeI GAWTC 5 cut(s) 4, 53, 58, 179, 313
PflFI GACNNNGTC 2 cut(s) 584, 782
PkrI GCNGC 1 cut(s) 124
PleI GAGTC 1 cut(s) 327
PpsI GAGTC 1 cut(s) 327
PpuMI RGGWCCY 1 cut(s) 462
PscI ACATGT 1 cut(s) 254
PshBI ATTAAT 2 cut(s) 275, 716
Psp5II RGGWCCY 1 cut(s) 462
Psp6I CCWGG 2 cut(s) 83, 144
PspGI CCWGG 2 cut(s) 83, 144
PspN4I GGNNCC 1 cut(s) 551
PspPI GGNCC 2 cut(s) 462, 549
PspPPI RGGWCCY 1 cut(s) 462
PspXI VCTCGAGB 1 cut(s) 341
PsuI RGATCY 3 cut(s) 494, 518, 814
PsyI GACNNNGTC 2 cut(s) 584, 782
RsaI GTAC 1 cut(s) 264
RsaNI GTAC 1 cut(s) 263
SaqAI TTAA 5 cut(s) 275, 297, 617, 716, 850
SatI GCNGC 1 cut(s) 123
Sau3AI GATC 4 cut(s) 494, 518, 804, 814
Sau96I GGNCC 2 cut(s) 462, 549
SchI GAGTC 1 cut(s) 328
ScrFI CCNGG 3 cut(s) 85, 146, 250
SduI GDGCHC 1 cut(s) 272
SetI ASST 5 cut(s) 147, 467, 543, 642, 847
SexAI ACCWGGT 1 cut(s) 144
Sfr274I CTCGAG 1 cut(s) 341
SinI GGWCC 2 cut(s) 462, 549
SlaI CTCGAG 1 cut(s) 341
SmlI CTYRAG 2 cut(s) 183, 341
SmoI CTYRAG 2 cut(s) 183, 341
SphI GCATGC 1 cut(s) 794
Sse9I AATT 6 cut(s) 35, 294, 487, 614, 768, 798
SseBI AGGCCT 1 cut(s) 445
SsiI CCGC 4 cut(s) 90, 123, 260, 346
SspI AATATT 1 cut(s) 364
StuI AGGCCT 1 cut(s) 445
StyD4I CCNGG 3 cut(s) 83, 144, 248
StyI CCWWGG 2 cut(s) 379, 522
TaaI ACNGT 3 cut(s) 267, 440, 594
TaqI TCGA 8 cut(s) 33, 56, 342, 416, 499, 562, 579, 786
TasI AATT 6 cut(s) 35, 294, 487, 614, 768, 798
TauI GCSGC 1 cut(s) 125
TfiI GAWTC 5 cut(s) 4, 53, 58, 179, 313
Tru1I TTAA 5 cut(s) 275, 297, 617, 716, 850
Tru9I TTAA 5 cut(s) 275, 297, 617, 716, 850
TseFI GTSAC 1 cut(s) 221
Tsp45I GTSAC 1 cut(s) 221
TspDTI ATGAA 4 cut(s) 204, 414, 470, 762
Tth111I GACNNNGTC 2 cut(s) 584, 782
VneI GTGCAC 1 cut(s) 268
VpaK11BI GGWCC 2 cut(s) 462, 549
VspI ATTAAT 2 cut(s) 275, 716
XagI CCTNNNNNAGG 1 cut(s) 439
XapI RAATTY 3 cut(s) 35, 487, 798
XceI RCATGY 2 cut(s) 258, 794
XhoI CTCGAG 1 cut(s) 341
XmnI GAANNNNTTC 3 cut(s) 57, 487, 769
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.