Rmu_sc0016848.1_g000001

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0016848.1
OG0000100
Physical Location & Seq
Forward (+)
10 .. 2269
2260 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0016848.1_g000001.1.cds

Sequence Viewer

Length: 960 bp
atgtcaacaagtgatatatctatgattttaggagtgccagggtccggcttatcagtaccaaagaccaaagaatgggcatacaactctgagttcttaaccaagtactttgataaaaagcaaaggatcaacaaggctgctgcagagcaagcttttaagaacgcattggcagaaactccaaaaacagcggaagaaaaaaagaaacgggacaaaaatgttgccgtattagtactcttgaaccttttcatcaaactcctgttcccaaactctggaggaacaatatcttgggactatgtaagagtctgtgaagaggtggagagtgatgataacgactcaactcctcatcccccaccacctagtttccctccgccaaaatcaaaggcccctcaggacaagccaactaactgcaagaactccaaaaacacaaaatctcaaggtggtattcacgggactcagtcacaacctgcctactccacagcaagcgcatctgagatgacatcttttgcaccacactcaactgaccgaggacatcagtcaccagttcaatgcctcgcccaagcagctgcacagattgattcatcaacctttcctgaggttaaattgggaacaacagaagatgcttgcaccccaaatacggcttggattaatgcattgtttgagtttccacctgcggctgcgttacgatcttcacctccacgaaaagtcagtttggaagatatgcaagcagagctgcagaagtatcagatcattatatcaccagaggttcagcctatatttgacgtcgaaccagtcaattacatttctcctacggaacagatgacaagacctgagttcaccatgccaattttagaggacatatcagggcaggactcagaatctatttgcctctattcttatgtacttaggatgaagagaaaggagagagtgaaaaaaaaaatgatattttctggtgggacgaggtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1985 PMD

Protein Analysis

319

Amino Acids

35.28

Weight (kDa)

7.59

Isoelectric Point (pI)

59.96

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000100)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr6g0248691
rosa_multiflora Rmu_co8124940.1_g000001 Rmu_co8378695.1_g000001 Rmu_sc0000023.1_g000005 Rmu_sc0000149.1_g000044 Rmu_sc0000195.1_g000019 Rmu_sc0000270.1_g000002 Rmu_sc0000270.1_g000003 Rmu_sc0000433.1_g000016 Rmu_sc0000493.1_g000067 Rmu_sc0000493.1_g000069 Rmu_sc0000493.1_g000070 Rmu_sc0000493.1_g000071 Rmu_sc0000532.1_g000015 Rmu_sc0000532.1_g000017 Rmu_sc0000552.1_g000004 Rmu_sc0000692.1_g000012 Rmu_sc0000733.1_g000017 Rmu_sc0000738.1_g000026 Rmu_sc0000738.1_g000027 Rmu_sc0000738.1_g000028 Rmu_sc0000738.1_g000030 Rmu_sc0000806.1_g000006 Rmu_sc0000863.1_g000026 Rmu_sc0000863.1_g000027 Rmu_sc0000863.1_g000028 Rmu_sc0000863.1_g000029 Rmu_sc0000863.1_g000030 Rmu_sc0000885.1_g000001 Rmu_sc0001168.1_g000020 Rmu_sc0001168.1_g000021 Rmu_sc0001214.1_g000031 Rmu_sc0001214.1_g000032 Rmu_sc0001239.1_g000003 Rmu_sc0001355.1_g000003 Rmu_sc0001373.1_g000008 Rmu_sc0001373.1_g000009 Rmu_sc0001373.1_g000010 Rmu_sc0001587.1_g000003 Rmu_sc0001648.1_g000020 Rmu_sc0001648.1_g000021 Rmu_sc0001648.1_g000022 Rmu_sc0001648.1_g000023 Rmu_sc0001836.1_g000052 Rmu_sc0001836.1_g000053 Rmu_sc0001913.1_g000025 Rmu_sc0001913.1_g000030 Rmu_sc0001938.1_g000005 Rmu_sc0001938.1_g000007 Rmu_sc0001977.1_g000016 Rmu_sc0001977.1_g000017 Rmu_sc0001977.1_g000018 Rmu_sc0001977.1_g000019 Rmu_sc0002080.1_g000031 Rmu_sc0002095.1_g000011 Rmu_sc0002095.1_g000012 Rmu_sc0002202.1_g000002 Rmu_sc0002202.1_g000004 Rmu_sc0002765.1_g000012 Rmu_sc0002955.1_g000003 Rmu_sc0002983.1_g000001 Rmu_sc0002983.1_g000002 Rmu_sc0002983.1_g000005 Rmu_sc0002983.1_g000006 Rmu_sc0003832.1_g000010 Rmu_sc0003880.1_g000041 Rmu_sc0003880.1_g000043 Rmu_sc0003981.1_g000011 Rmu_sc0003981.1_g000016 Rmu_sc0004118.1_g000013 Rmu_sc0004125.1_g000008 Rmu_sc0004155.1_g000007 Rmu_sc0004155.1_g000008 Rmu_sc0004155.1_g000009 Rmu_sc0004465.1_g000004 Rmu_sc0004465.1_g000005 Rmu_sc0004755.1_g000030 Rmu_sc0005014.1_g000009 Rmu_sc0005023.1_g000027 Rmu_sc0005446.1_g000019 Rmu_sc0006273.1_g000001 Rmu_sc0006948.1_g000020 Rmu_sc0007412.1_g000005 Rmu_sc0007996.1_g000001 Rmu_sc0009749.1_g000002 Rmu_sc0011497.1_g000008 Rmu_sc0011497.1_g000009 Rmu_sc0011497.1_g000010 Rmu_sc0012018.1_g000001 Rmu_sc0012347.1_g000004 Rmu_sc0012347.1_g000005 Rmu_sc0013290.1_g000001 Rmu_sc0013576.1_g000009 Rmu_sc0013576.1_g000011 Rmu_sc0014354.1_g000001 Rmu_sc0014482.1_g000006 Rmu_sc0016848.1_g000001 Rmu_sc0018723.1_g000002 Rmu_sc0018723.1_g000003 Rmu_sc0020085.1_g000001 Rmu_sc0022367.1_g000001 Rmu_sc0023661.1_g000001 Rmu_sc0030814.1_g000001 Rmu_sc0034982.1_g000001 Rmu_sc0036901.1_g000001 Rmu_ssc0000064.1_g000016 Rmu_ssc0000170.1_g000012 Rmu_ssc0000170.1_g000014 Rmu_ssc0000189.1_g000048 Rmu_ssc0000443.1_g000005
rosa_roxburghii Rroxscaffold_159G00432950 Rroxscaffold_1G00015760 Rroxscaffold_1G00015770 Rroxscaffold_1G00015780 Rroxscaffold_1G00015950 Rroxscaffold_1G00015980 Rroxscaffold_1G00018050 Rroxscaffold_1G00018060 Rroxscaffold_1G00020330 Rroxscaffold_1G00020340 Rroxscaffold_1G00020350 Rroxscaffold_1G00020370 Rroxscaffold_1G00021720 Rroxscaffold_1G00034800 Rroxscaffold_1G00036050 Rroxscaffold_1G00036060 Rroxscaffold_1G00036070 Rroxscaffold_1G00036160 Rroxscaffold_1G00036170 Rroxscaffold_1G00043200 Rroxscaffold_1G00043210 Rroxscaffold_1G00047700 Rroxscaffold_1G00055120 Rroxscaffold_1G00056300 Rroxscaffold_1G00056320 Rroxscaffold_1G00064030 Rroxscaffold_1G00064050 Rroxscaffold_1G00064110 Rroxscaffold_1G00064130 Rroxscaffold_1G00064140 Rroxscaffold_1G00069580 Rroxscaffold_1G00069590 Rroxscaffold_1G00069600 Rroxscaffold_2G00086000 Rroxscaffold_2G00095520 Rroxscaffold_2G00095530 Rroxscaffold_2G00102950 Rroxscaffold_2G00102960 Rroxscaffold_2G00102980 Rroxscaffold_2G00111430 Rroxscaffold_2G00111440 Rroxscaffold_2G00123850 Rroxscaffold_2G00123860 Rroxscaffold_2G00123870 Rroxscaffold_2G00127600 Rroxscaffold_2G00128430 Rroxscaffold_2G00128440 Rroxscaffold_2G00134550 Rroxscaffold_2G00134560 Rroxscaffold_2G00134570 Rroxscaffold_2G00150440 Rroxscaffold_2G00150450 Rroxscaffold_3G00221670 Rroxscaffold_3G00231550 Rroxscaffold_3G00231560 Rroxscaffold_3G00231580 Rroxscaffold_3G00231590 Rroxscaffold_3G00238200 Rroxscaffold_3G00238210 Rroxscaffold_3G00259430 Rroxscaffold_3G00271580 Rroxscaffold_3G00271590 Rroxscaffold_4G00277030 Rroxscaffold_4G00277050 Rroxscaffold_4G00277060 Rroxscaffold_4G00277070 Rroxscaffold_4G00293250 Rroxscaffold_4G00293260 Rroxscaffold_4G00300140 Rroxscaffold_4G00308740 Rroxscaffold_4G00309540 Rroxscaffold_4G00319500 Rroxscaffold_4G00325410 Rroxscaffold_4G00328420 Rroxscaffold_4G00329630 Rroxscaffold_5G00339100 Rroxscaffold_5G00339110 Rroxscaffold_5G00339130 Rroxscaffold_5G00349460 Rroxscaffold_5G00349470 Rroxscaffold_5G00349480 Rroxscaffold_5G00349490 Rroxscaffold_5G00349800 Rroxscaffold_5G00354000 Rroxscaffold_5G00357420 Rroxscaffold_5G00357430 Rroxscaffold_5G00366730 Rroxscaffold_5G00366740 Rroxscaffold_5G00366750 Rroxscaffold_5G00371380 Rroxscaffold_5G00371390 Rroxscaffold_5G00371410 Rroxscaffold_6G00390390 Rroxscaffold_6G00390400 Rroxscaffold_6G00390410 Rroxscaffold_6G00391800 Rroxscaffold_6G00391810 Rroxscaffold_6G00399200 Rroxscaffold_6G00403500 Rroxscaffold_6G00403510 Rroxscaffold_6G00403520 Rroxscaffold_6G00407230 Rroxscaffold_6G00411100 Rroxscaffold_6G00411700 Rroxscaffold_6G00415300 Rroxscaffold_6G00415310 Rroxscaffold_6G00422180 Rroxscaffold_6G00422200 Rroxscaffold_6G00422210 Rroxscaffold_7G00157710 Rroxscaffold_7G00157720 Rroxscaffold_7G00157740 Rroxscaffold_7G00194140 Rroxscaffold_7G00196750 Rroxscaffold_7G00197960 Rroxscaffold_7G00208750 Rroxscaffold_7G00208760 Rroxscaffold_7G00208780 Rroxscaffold_7G00213740 Rroxscaffold_7G00215180 Rroxscaffold_7G00215190 Rroxscaffold_7G00215200
rosa_rugosa Rorug03G0270600 Rorug05G0169200
rosa_samantha Rh1AG048500 Rh1AG091500 Rh1AG190900 Rh2BG351700 Rh2BG494300 Rh2BG539800 Rh3BG209100 Rh4CG136600 Rh4CG194800 Rh4CG381100 Rh5BG080500 Rh5BG083000 Rh5BG083100 Rh5BG124000 Rh5BG126200 Rh5BG131000 Rh5BG158900 Rh5BG284300 Rh5BG310800 Rh5BG437700 Rh6AG114700 Rh6AG126300 Rh6AG202500 Rh7CG009000 Rh7CG320700 Rh7CG355200 Rh7CG514200
rosa_wichuraiana Rw5G018600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 673
AatII GACGTC 1 cut(s) 780
Acc36I ACCTGC 2 cut(s) 469, 673
AccB7I CCANNNNNTGG 2 cut(s) 72, 266
AciI CCGC 3 cut(s) 185, 365, 668
AclWI GGATC 1 cut(s) 131
AcyI GRCGYC 1 cut(s) 777
AfaI GTAC 4 cut(s) 57, 104, 228, 897
AfiI CCNNNNNNNGG 4 cut(s) 44, 72, 266, 631
AgsI TTSAA 2 cut(s) 235, 542
AjnI CCWGG 1 cut(s) 37
AjuI GAANNNNNNNTTGG 2 cut(s) 265, 297
AluBI AGCT 3 cut(s) 149, 560, 727
AluI AGCT 3 cut(s) 149, 560, 727
AlwI GGATC 1 cut(s) 131
AoxI GGCC 1 cut(s) 378
ApeKI GCWGC 6 cut(s) 134, 137, 557, 560, 671, 727
AseI ATTAAT 1 cut(s) 642
Asp700I GAANNNNTTC 1 cut(s) 239
AspLEI GCGC 1 cut(s) 482
AspS9I GGNCC 2 cut(s) 42, 379
AsuHPI GGTGA 4 cut(s) 525, 678, 744, 823
AvaII GGWCC 1 cut(s) 42
AxyI CCTNAGG 2 cut(s) 384, 588
BbvI GCAGC 6 cut(s) 121, 124, 547, 569, 658, 714
BceAI ACGGC 2 cut(s) 203, 648
BciT130I CCWGG 1 cut(s) 39
BfaI CTAG 1 cut(s) 354
BfmI CTRYAG 2 cut(s) 138, 728
BfuAI ACCTGC 2 cut(s) 469, 673
BisI GCNGC 7 cut(s) 135, 138, 558, 561, 669, 672, 728
BlsI GCNGC 7 cut(s) 136, 139, 559, 562, 670, 673, 729
BmcAI AGTACT 2 cut(s) 104, 228
Bme1390I CCNGG 1 cut(s) 39
Bme18I GGWCC 1 cut(s) 42
BmgT120I GGNCC 2 cut(s) 42, 379
BmiI GGNNCC 2 cut(s) 43, 381
BmrFI CCNGG 1 cut(s) 39
BmsI GCATC 2 cut(s) 491, 604
BoxI GACNNNNGTC 1 cut(s) 529
BpmI CTGGAG 1 cut(s) 288
BpuEI CTTGAG 1 cut(s) 414
BsaHI GRCGYC 1 cut(s) 777
BsaJI CCNNGG 2 cut(s) 38, 520
Bsc4I CCNNNNNNNGG 4 cut(s) 44, 72, 266, 631
Bse1I ACTGG 2 cut(s) 536, 785
Bse21I CCTNAGG 2 cut(s) 384, 588
BseBI CCWGG 1 cut(s) 39
BseDI CCNNGG 2 cut(s) 38, 520
BseGI GGATG 2 cut(s) 340, 909
BseLI CCNNNNNNNGG 4 cut(s) 44, 72, 266, 631
BseMII CTCAG 7 cut(s) 78, 398, 464, 477, 579, 816, 882
BseNI ACTGG 2 cut(s) 536, 785
BseRI GAGGAG 1 cut(s) 327
BseXI GCAGC 6 cut(s) 121, 124, 547, 569, 658, 714
BsgI GTGCAG 1 cut(s) 546
BshFI GGCC 1 cut(s) 380
BsiSI CCGG 1 cut(s) 45
BslFI GGGAC 3 cut(s) 218, 299, 460
BslI CCNNNNNNNGG 4 cut(s) 44, 72, 266, 631
BsmFI GGGAC 3 cut(s) 218, 299, 460
BsnI GGCC 1 cut(s) 380
Bsp143I GATC 3 cut(s) 123, 680, 741
BspACI CCGC 3 cut(s) 185, 365, 668
BspANI GGCC 1 cut(s) 380
BspCNI CTCAG 7 cut(s) 79, 397, 463, 478, 580, 817, 881
BspLI GGNNCC 2 cut(s) 43, 381
BspMAI CTGCAG 2 cut(s) 142, 732
BspMI ACCTGC 2 cut(s) 469, 673
BspPI GGATC 1 cut(s) 131
BsrI ACTGG 2 cut(s) 536, 785
BssECI CCNNGG 2 cut(s) 38, 520
BssMI GATC 3 cut(s) 123, 680, 741
BssNI GRCGYC 1 cut(s) 777
Bst2UI CCWGG 1 cut(s) 39
Bst6I CTCTTC 2 cut(s) 300, 902
BstACI GRCGYC 1 cut(s) 777
BstC8I GCNNGC 4 cut(s) 147, 478, 619, 720
BstDEI CTNAG 8 cut(s) 87, 384, 450, 486, 588, 825, 868, 899
BstF5I GGATG 2 cut(s) 340, 909
BstHHI GCGC 1 cut(s) 482
BstKTI GATC 3 cut(s) 126, 683, 744
BstMBI GATC 3 cut(s) 123, 680, 741
BstMWI GCNNNNNNNGC 3 cut(s) 146, 557, 724
BstNI CCWGG 1 cut(s) 39
BstPAI GACNNNNGTC 1 cut(s) 529
BstSCI CCNGG 1 cut(s) 37
BstSFI CTRYAG 2 cut(s) 138, 728
BstV1I GCAGC 6 cut(s) 121, 124, 547, 569, 658, 714
Bsu36I CCTNAGG 2 cut(s) 384, 588
BsuRI GGCC 1 cut(s) 380
BtsCI GGATG 2 cut(s) 340, 909
BveI ACCTGC 2 cut(s) 469, 673
Cac8I GCNNGC 4 cut(s) 147, 478, 619, 720
CfoI GCGC 1 cut(s) 482
Cfr13I GGNCC 2 cut(s) 42, 379
Csp6I GTAC 4 cut(s) 56, 103, 227, 896
CviAII CATG 1 cut(s) 835
CviQI GTAC 4 cut(s) 56, 103, 227, 896
DdeI CTNAG 8 cut(s) 87, 384, 450, 486, 588, 825, 868, 899
DpnI GATC 3 cut(s) 125, 682, 743
DpnII GATC 3 cut(s) 123, 680, 741
Eam1104I CTCTTC 2 cut(s) 300, 902
EarI CTCTTC 2 cut(s) 300, 902
EciI GGCGGA 1 cut(s) 354
Eco47I GGWCC 1 cut(s) 42
Eco81I CCTNAGG 2 cut(s) 384, 588
EcoO109I RGGNCCY 1 cut(s) 379
EcoRII CCWGG 1 cut(s) 37
EcoT22I ATGCAT 1 cut(s) 649
FaeI CATG 1 cut(s) 838
FaqI GGGAC 3 cut(s) 218, 299, 460
FatI CATG 1 cut(s) 834
Fnu4HI GCNGC 7 cut(s) 135, 138, 558, 561, 669, 672, 728
FokI GGATG 2 cut(s) 327, 916
Fsp4HI GCNGC 7 cut(s) 135, 138, 558, 561, 669, 672, 728
FspBI CTAG 1 cut(s) 354
GlaI GCGC 1 cut(s) 481
GluI GCNGC 7 cut(s) 135, 138, 558, 561, 669, 672, 728
GsuI CTGGAG 1 cut(s) 288
HaeIII GGCC 1 cut(s) 380
HapII CCGG 1 cut(s) 45
HhaI GCGC 1 cut(s) 482
Hin1I GRCGYC 1 cut(s) 777
Hin1II CATG 1 cut(s) 838
Hin6I GCGC 1 cut(s) 480
HinP1I GCGC 1 cut(s) 480
HincII GTYRAC 1 cut(s) 6
HindII GTYRAC 1 cut(s) 6
HindIII AAGCTT 1 cut(s) 147
HinfI GANTC 6 cut(s) 297, 329, 448, 572, 866, 872
HpaII CCGG 1 cut(s) 45
HphI GGTGA 4 cut(s) 525, 678, 744, 823
Hpy166II GTNNAC 2 cut(s) 6, 831
Hpy188I TCNGA 4 cut(s) 88, 487, 741, 871
Hpy188III TCNNGA 4 cut(s) 232, 267, 386, 587
Hpy8I GTNNAC 2 cut(s) 6, 831
Hpy99I CGWCG 1 cut(s) 782
HpyCH4IV ACGT 1 cut(s) 777
HpyCH4V TGCA 8 cut(s) 140, 405, 503, 563, 621, 647, 718, 730
HpyF10VI GCNNNNNNNGC 3 cut(s) 146, 557, 724
HpyF3I CTNAG 8 cut(s) 87, 384, 450, 486, 588, 825, 868, 899
HpySE526I ACGT 1 cut(s) 777
Hsp92I GRCGYC 1 cut(s) 777
Hsp92II CATG 1 cut(s) 838
HspAI GCGC 1 cut(s) 480
Kzo9I GATC 3 cut(s) 123, 680, 741
Lsp1109I GCAGC 6 cut(s) 121, 124, 547, 569, 658, 714
LweI GCATC 2 cut(s) 491, 604
MaeI CTAG 1 cut(s) 354
MaeII ACGT 1 cut(s) 777
MaeIII GTNAC 3 cut(s) 453, 531, 675
MalI GATC 3 cut(s) 125, 682, 743
MboI GATC 3 cut(s) 123, 680, 741
MboII GAAGA 6 cut(s) 200, 317, 623, 675, 722, 919
MluCI AATT 3 cut(s) 596, 790, 840
MlyI GAGTC 4 cut(s) 306, 323, 442, 860
Mph1103I ATGCAT 1 cut(s) 649
MroXI GAANNNNTTC 1 cut(s) 239
MseI TTAA 4 cut(s) 95, 153, 594, 642
MspA1I CMGCKG 2 cut(s) 185, 560
MspI CCGG 1 cut(s) 45
MspR9I CCNGG 1 cut(s) 39
MvaI CCWGG 1 cut(s) 39
MwoI GCNNNNNNNGC 3 cut(s) 146, 557, 724
NdeII GATC 3 cut(s) 123, 680, 741
NlaIII CATG 1 cut(s) 838
NlaIV GGNNCC 2 cut(s) 43, 381
NmuCI GTSAC 2 cut(s) 453, 531
NsiI ATGCAT 1 cut(s) 649
PaqCI CACCTGC 1 cut(s) 673
PdmI GAANNNNTTC 1 cut(s) 239
PfeI GAWTC 2 cut(s) 572, 872
PflFI GACNNNGTC 1 cut(s) 451
PflMI CCANNNNNTGG 2 cut(s) 72, 266
PkrI GCNGC 7 cut(s) 136, 139, 559, 562, 670, 673, 729
PleI GAGTC 4 cut(s) 305, 323, 442, 860
PpsI GAGTC 4 cut(s) 305, 323, 442, 860
PshAI GACNNNNGTC 1 cut(s) 529
PshBI ATTAAT 1 cut(s) 642
Psp6I CCWGG 1 cut(s) 37
PspGI CCWGG 1 cut(s) 37
PspN4I GGNNCC 2 cut(s) 43, 381
PspPI GGNCC 2 cut(s) 42, 379
PstI CTGCAG 2 cut(s) 142, 732
PsyI GACNNNGTC 1 cut(s) 451
PvuII CAGCTG 1 cut(s) 560
RsaI GTAC 4 cut(s) 57, 104, 228, 897
RsaNI GTAC 4 cut(s) 56, 103, 227, 896
SaqAI TTAA 4 cut(s) 95, 153, 594, 642
SatI GCNGC 7 cut(s) 135, 138, 558, 561, 669, 672, 728
Sau3AI GATC 3 cut(s) 123, 680, 741
Sau96I GGNCC 2 cut(s) 42, 379
ScaI AGTACT 2 cut(s) 104, 228
SchI GAGTC 4 cut(s) 306, 323, 442, 860
ScrFI CCNGG 1 cut(s) 39
SfaNI GCATC 2 cut(s) 491, 604
SfcI CTRYAG 2 cut(s) 138, 728
SinI GGWCC 1 cut(s) 42
SmlI CTYRAG 1 cut(s) 429
SmoI CTYRAG 1 cut(s) 429
Sse9I AATT 3 cut(s) 596, 790, 840
SsiI CCGC 3 cut(s) 185, 365, 668
SspMI CTAG 1 cut(s) 354
StyD4I CCNGG 1 cut(s) 37
TaiI ACGT 1 cut(s) 780
TaqI TCGA 1 cut(s) 780
TaqII GACCGA 1 cut(s) 534
TasI AATT 3 cut(s) 596, 790, 840
TatI WGTACW 3 cut(s) 102, 226, 895
TauI GCSGC 1 cut(s) 671
TfiI GAWTC 2 cut(s) 572, 872
Tru1I TTAA 4 cut(s) 95, 153, 594, 642
Tru9I TTAA 4 cut(s) 95, 153, 594, 642
TseFI GTSAC 2 cut(s) 453, 531
TseI GCWGC 6 cut(s) 134, 137, 557, 560, 671, 727
Tsp45I GTSAC 2 cut(s) 453, 531
TspDTI ATGAA 3 cut(s) 232, 564, 920
TspGWI ACGGA 1 cut(s) 821
Tth111I GACNNNGTC 1 cut(s) 451
Van91I CCANNNNNTGG 2 cut(s) 72, 266
VpaK11BI GGWCC 1 cut(s) 42
VspI ATTAAT 1 cut(s) 642
XcmI CCANNNNNNNNNTGG 1 cut(s) 633
XmnI GAANNNNTTC 1 cut(s) 239
XspI CTAG 1 cut(s) 354
ZraI GACGTC 1 cut(s) 778
ZrmI AGTACT 2 cut(s) 104, 228
Zsp2I ATGCAT 1 cut(s) 649
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.