Rmu_ssc0000170.1_g000012

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000170.1
OG0000100
Physical Location & Seq
Forward (+)
52250 .. 54271
2022 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000170.1_g000012.1.cds

Sequence Viewer

Length: 1014 bp
atgaactctgaaagctggcccaatcttaaactcgattggaggcccaaccaaccgataccaaccggcctgtaccgagaagttggtatatcgacttttgtggccggtagtggtacttcattttgtgtaccaacaagttctggtacggtaggtggttttggacttgaaggtccgtcaccatttggaaatattgtcgatgcattccatggtggctacatagaggagaagtcagccaagaaatctgatgatttcattacactcctcctgcatgcctacgaccatgaaaatgacatcttcttctttggaaagaagaaattcaggatctcgacaagagatatttcaaagatcctaggaatgccagaaaaaggtgagttggtcccaaagacttctgagggtgcatatcagtccgactttgtccagcagtttttttcaaacacagcgagaattaacaagagagccgtggagaaagctctgcaagatgcgctcaaagagaatccaacaacagaggaagggattgaggagaaggacaaaaatgtggcaagattaatcttgctggacttgttcatcaagtttctgttcccaaatgcaggaggaacaatttcatgggactacgtaaaagcctgcgaaaatttggataagatcggatcttatgactgggcaagggaagttggaagcttcttaaaaaagtctataaagactttgaaaaataaaatggagtcaagcagcccatatagtaatacagcgggttgcgttctgataatactgaaaatctttgaaaacttgaaggaggatagagagaaatcagaatccgaggaagaggagaatagatcagatgaagcaaagacagttttggaaggagaggaaaaaggagctgatgatcagaattgtgaaaacgaagaagataacctagaagttgaggtggctgaacaggaaacagcttcagaaaaaaaacaagtgggagaaagagcttcagaaaaaggaggaggagataagatatatgattgtggagaaagataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1985 PMD

Protein Analysis

337

Amino Acids

37.59

Weight (kDa)

4.83

Isoelectric Point (pI)

41.55

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000100)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr6g0248691
rosa_multiflora Rmu_co8124940.1_g000001 Rmu_co8378695.1_g000001 Rmu_sc0000023.1_g000005 Rmu_sc0000149.1_g000044 Rmu_sc0000195.1_g000019 Rmu_sc0000270.1_g000002 Rmu_sc0000270.1_g000003 Rmu_sc0000433.1_g000016 Rmu_sc0000493.1_g000067 Rmu_sc0000493.1_g000069 Rmu_sc0000493.1_g000070 Rmu_sc0000493.1_g000071 Rmu_sc0000532.1_g000015 Rmu_sc0000532.1_g000017 Rmu_sc0000552.1_g000004 Rmu_sc0000692.1_g000012 Rmu_sc0000733.1_g000017 Rmu_sc0000738.1_g000026 Rmu_sc0000738.1_g000027 Rmu_sc0000738.1_g000028 Rmu_sc0000738.1_g000030 Rmu_sc0000806.1_g000006 Rmu_sc0000863.1_g000026 Rmu_sc0000863.1_g000027 Rmu_sc0000863.1_g000028 Rmu_sc0000863.1_g000029 Rmu_sc0000863.1_g000030 Rmu_sc0000885.1_g000001 Rmu_sc0001168.1_g000020 Rmu_sc0001168.1_g000021 Rmu_sc0001214.1_g000031 Rmu_sc0001214.1_g000032 Rmu_sc0001239.1_g000003 Rmu_sc0001355.1_g000003 Rmu_sc0001373.1_g000008 Rmu_sc0001373.1_g000009 Rmu_sc0001373.1_g000010 Rmu_sc0001587.1_g000003 Rmu_sc0001648.1_g000020 Rmu_sc0001648.1_g000021 Rmu_sc0001648.1_g000022 Rmu_sc0001648.1_g000023 Rmu_sc0001836.1_g000052 Rmu_sc0001836.1_g000053 Rmu_sc0001913.1_g000025 Rmu_sc0001913.1_g000030 Rmu_sc0001938.1_g000005 Rmu_sc0001938.1_g000007 Rmu_sc0001977.1_g000016 Rmu_sc0001977.1_g000017 Rmu_sc0001977.1_g000018 Rmu_sc0001977.1_g000019 Rmu_sc0002080.1_g000031 Rmu_sc0002095.1_g000011 Rmu_sc0002095.1_g000012 Rmu_sc0002202.1_g000002 Rmu_sc0002202.1_g000004 Rmu_sc0002765.1_g000012 Rmu_sc0002955.1_g000003 Rmu_sc0002983.1_g000001 Rmu_sc0002983.1_g000002 Rmu_sc0002983.1_g000005 Rmu_sc0002983.1_g000006 Rmu_sc0003832.1_g000010 Rmu_sc0003880.1_g000041 Rmu_sc0003880.1_g000043 Rmu_sc0003981.1_g000011 Rmu_sc0003981.1_g000016 Rmu_sc0004118.1_g000013 Rmu_sc0004125.1_g000008 Rmu_sc0004155.1_g000007 Rmu_sc0004155.1_g000008 Rmu_sc0004155.1_g000009 Rmu_sc0004465.1_g000004 Rmu_sc0004465.1_g000005 Rmu_sc0004755.1_g000030 Rmu_sc0005014.1_g000009 Rmu_sc0005023.1_g000027 Rmu_sc0005446.1_g000019 Rmu_sc0006273.1_g000001 Rmu_sc0006948.1_g000020 Rmu_sc0007412.1_g000005 Rmu_sc0007996.1_g000001 Rmu_sc0009749.1_g000002 Rmu_sc0011497.1_g000008 Rmu_sc0011497.1_g000009 Rmu_sc0011497.1_g000010 Rmu_sc0012018.1_g000001 Rmu_sc0012347.1_g000004 Rmu_sc0012347.1_g000005 Rmu_sc0013290.1_g000001 Rmu_sc0013576.1_g000009 Rmu_sc0013576.1_g000011 Rmu_sc0014354.1_g000001 Rmu_sc0014482.1_g000006 Rmu_sc0016848.1_g000001 Rmu_sc0018723.1_g000002 Rmu_sc0018723.1_g000003 Rmu_sc0020085.1_g000001 Rmu_sc0022367.1_g000001 Rmu_sc0023661.1_g000001 Rmu_sc0030814.1_g000001 Rmu_sc0034982.1_g000001 Rmu_sc0036901.1_g000001 Rmu_ssc0000064.1_g000016 Rmu_ssc0000170.1_g000012 Rmu_ssc0000170.1_g000014 Rmu_ssc0000189.1_g000048 Rmu_ssc0000443.1_g000005
rosa_roxburghii Rroxscaffold_159G00432950 Rroxscaffold_1G00015760 Rroxscaffold_1G00015770 Rroxscaffold_1G00015780 Rroxscaffold_1G00015950 Rroxscaffold_1G00015980 Rroxscaffold_1G00018050 Rroxscaffold_1G00018060 Rroxscaffold_1G00020330 Rroxscaffold_1G00020340 Rroxscaffold_1G00020350 Rroxscaffold_1G00020370 Rroxscaffold_1G00021720 Rroxscaffold_1G00034800 Rroxscaffold_1G00036050 Rroxscaffold_1G00036060 Rroxscaffold_1G00036070 Rroxscaffold_1G00036160 Rroxscaffold_1G00036170 Rroxscaffold_1G00043200 Rroxscaffold_1G00043210 Rroxscaffold_1G00047700 Rroxscaffold_1G00055120 Rroxscaffold_1G00056300 Rroxscaffold_1G00056320 Rroxscaffold_1G00064030 Rroxscaffold_1G00064050 Rroxscaffold_1G00064110 Rroxscaffold_1G00064130 Rroxscaffold_1G00064140 Rroxscaffold_1G00069580 Rroxscaffold_1G00069590 Rroxscaffold_1G00069600 Rroxscaffold_2G00086000 Rroxscaffold_2G00095520 Rroxscaffold_2G00095530 Rroxscaffold_2G00102950 Rroxscaffold_2G00102960 Rroxscaffold_2G00102980 Rroxscaffold_2G00111430 Rroxscaffold_2G00111440 Rroxscaffold_2G00123850 Rroxscaffold_2G00123860 Rroxscaffold_2G00123870 Rroxscaffold_2G00127600 Rroxscaffold_2G00128430 Rroxscaffold_2G00128440 Rroxscaffold_2G00134550 Rroxscaffold_2G00134560 Rroxscaffold_2G00134570 Rroxscaffold_2G00150440 Rroxscaffold_2G00150450 Rroxscaffold_3G00221670 Rroxscaffold_3G00231550 Rroxscaffold_3G00231560 Rroxscaffold_3G00231580 Rroxscaffold_3G00231590 Rroxscaffold_3G00238200 Rroxscaffold_3G00238210 Rroxscaffold_3G00259430 Rroxscaffold_3G00271580 Rroxscaffold_3G00271590 Rroxscaffold_4G00277030 Rroxscaffold_4G00277050 Rroxscaffold_4G00277060 Rroxscaffold_4G00277070 Rroxscaffold_4G00293250 Rroxscaffold_4G00293260 Rroxscaffold_4G00300140 Rroxscaffold_4G00308740 Rroxscaffold_4G00309540 Rroxscaffold_4G00319500 Rroxscaffold_4G00325410 Rroxscaffold_4G00328420 Rroxscaffold_4G00329630 Rroxscaffold_5G00339100 Rroxscaffold_5G00339110 Rroxscaffold_5G00339130 Rroxscaffold_5G00349460 Rroxscaffold_5G00349470 Rroxscaffold_5G00349480 Rroxscaffold_5G00349490 Rroxscaffold_5G00349800 Rroxscaffold_5G00354000 Rroxscaffold_5G00357420 Rroxscaffold_5G00357430 Rroxscaffold_5G00366730 Rroxscaffold_5G00366740 Rroxscaffold_5G00366750 Rroxscaffold_5G00371380 Rroxscaffold_5G00371390 Rroxscaffold_5G00371410 Rroxscaffold_6G00390390 Rroxscaffold_6G00390400 Rroxscaffold_6G00390410 Rroxscaffold_6G00391800 Rroxscaffold_6G00391810 Rroxscaffold_6G00399200 Rroxscaffold_6G00403500 Rroxscaffold_6G00403510 Rroxscaffold_6G00403520 Rroxscaffold_6G00407230 Rroxscaffold_6G00411100 Rroxscaffold_6G00411700 Rroxscaffold_6G00415300 Rroxscaffold_6G00415310 Rroxscaffold_6G00422180 Rroxscaffold_6G00422200 Rroxscaffold_6G00422210 Rroxscaffold_7G00157710 Rroxscaffold_7G00157720 Rroxscaffold_7G00157740 Rroxscaffold_7G00194140 Rroxscaffold_7G00196750 Rroxscaffold_7G00197960 Rroxscaffold_7G00208750 Rroxscaffold_7G00208760 Rroxscaffold_7G00208780 Rroxscaffold_7G00213740 Rroxscaffold_7G00215180 Rroxscaffold_7G00215190 Rroxscaffold_7G00215200
rosa_rugosa Rorug03G0270600 Rorug05G0169200
rosa_samantha Rh1AG048500 Rh1AG091500 Rh1AG190900 Rh2BG351700 Rh2BG494300 Rh2BG539800 Rh3BG209100 Rh4CG136600 Rh4CG194800 Rh4CG381100 Rh5BG080500 Rh5BG083000 Rh5BG083100 Rh5BG124000 Rh5BG126200 Rh5BG131000 Rh5BG158900 Rh5BG284300 Rh5BG310800 Rh5BG437700 Rh6AG114700 Rh6AG126300 Rh6AG202500 Rh7CG009000 Rh7CG320700 Rh7CG355200 Rh7CG514200
rosa_wichuraiana Rw5G018600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 165
AciI CCGC 1 cut(s) 740
AclWI GGATC 3 cut(s) 326, 337, 649
AcoI YGGCCR 1 cut(s) 99
AcsI RAATTY 2 cut(s) 311, 625
AcuI CTGAAG 2 cut(s) 921, 951
AfaI GTAC 4 cut(s) 71, 112, 126, 142
AfiI CCNNNNNNNGG 2 cut(s) 362, 584
AgsI TTSAA 6 cut(s) 164, 339, 429, 700, 773, 781
AluBI AGCT 6 cut(s) 15, 467, 672, 869, 935, 965
AluI AGCT 6 cut(s) 15, 467, 672, 869, 935, 965
AlwI GGATC 3 cut(s) 326, 337, 649
AoxI GGCC 4 cut(s) 17, 41, 64, 99
ApeKI GCWGC 1 cut(s) 720
ApoI RAATTY 2 cut(s) 311, 625
AseI ATTAAT 1 cut(s) 542
Asp700I GAANNNNTTC 2 cut(s) 311, 595
AspA2I CCTAGG 1 cut(s) 346
AspLEI GCGC 1 cut(s) 481
AspS9I GGNCC 4 cut(s) 18, 42, 167, 373
AsuHPI GGTGA 2 cut(s) 165, 377
AvaII GGWCC 2 cut(s) 167, 373
AvrII CCTAGG 1 cut(s) 346
BarI GAAGNNNNNNTAC 2 cut(s) 97, 129
BbvI GCAGC 1 cut(s) 732
BceAI ACGGC 1 cut(s) 440
BclI TGATCA 1 cut(s) 874
BfaI CTAG 2 cut(s) 347, 905
BisI GCNGC 1 cut(s) 721
BlnI CCTAGG 1 cut(s) 346
BlsI GCNGC 1 cut(s) 722
Bme18I GGWCC 2 cut(s) 167, 373
BmgT120I GGNCC 4 cut(s) 18, 42, 167, 373
BmiI GGNNCC 1 cut(s) 375
BmrI ACTGGG 1 cut(s) 661
BmsI GCATC 2 cut(s) 184, 466
BmuI ACTGGG 1 cut(s) 661
BsaAI YACGTR 1 cut(s) 610
BsaJI CCNNGG 4 cut(s) 202, 346, 456, 807
Bsc4I CCNNNNNNNGG 2 cut(s) 362, 584
Bse118I RCCGGY 2 cut(s) 62, 101
Bse1I ACTGG 1 cut(s) 656
BseDI CCNNGG 4 cut(s) 202, 346, 456, 807
BseLI CCNNNNNNNGG 2 cut(s) 362, 584
BseMII CTCAG 1 cut(s) 378
BseNI ACTGG 1 cut(s) 656
BseRI GAGGAG 6 cut(s) 233, 248, 530, 830, 993, 996
BseXI GCAGC 1 cut(s) 732
BshFI GGCC 4 cut(s) 19, 43, 66, 101
BsiSI CCGG 2 cut(s) 63, 102
BslFI GGGAC 2 cut(s) 359, 617
BslI CCNNNNNNNGG 2 cut(s) 362, 584
BsmFI GGGAC 2 cut(s) 359, 617
BsmI GAATGC 2 cut(s) 197, 357
BsnI GGCC 4 cut(s) 19, 43, 66, 101
Bsp143I GATC 6 cut(s) 318, 342, 636, 641, 824, 874
Bsp19I CCATGG 1 cut(s) 202
BspACI CCGC 1 cut(s) 740
BspANI GGCC 4 cut(s) 19, 43, 66, 101
BspCNI CTCAG 1 cut(s) 379
BspLI GGNNCC 1 cut(s) 375
BspPI GGATC 3 cut(s) 326, 337, 649
BsrFI RCCGGY 2 cut(s) 62, 101
BsrI ACTGG 1 cut(s) 656
BssAI RCCGGY 2 cut(s) 62, 101
BssECI CCNNGG 4 cut(s) 202, 346, 456, 807
BssMI GATC 6 cut(s) 318, 342, 636, 641, 824, 874
BssT1I CCWWGG 2 cut(s) 202, 346
Bst4CI ACNGT 2 cut(s) 145, 844
Bst6I CTCTTC 1 cut(s) 807
BstBAI YACGTR 1 cut(s) 610
BstC8I GCNNGC 3 cut(s) 17, 267, 619
BstDEI CTNAG 1 cut(s) 387
BstDSI CCRYGG 2 cut(s) 202, 456
BstHHI GCGC 1 cut(s) 481
BstKTI GATC 6 cut(s) 321, 345, 639, 644, 827, 877
BstMBI GATC 6 cut(s) 318, 342, 636, 641, 824, 874
BstMWI GCNNNNNNNGC 1 cut(s) 478
BstNSI RCATGY 1 cut(s) 269
BstSNI TACGTA 1 cut(s) 610
BstV1I GCAGC 1 cut(s) 732
BstX2I RGATCY 3 cut(s) 318, 342, 641
BstYI RGATCY 3 cut(s) 318, 342, 641
BsuRI GGCC 4 cut(s) 19, 43, 66, 101
BtgI CCRYGG 2 cut(s) 202, 456
Cac8I GCNNGC 3 cut(s) 17, 267, 619
CfoI GCGC 1 cut(s) 481
Cfr10I RCCGGY 2 cut(s) 62, 101
Cfr13I GGNCC 4 cut(s) 18, 42, 167, 373
Csp6I GTAC 4 cut(s) 70, 111, 125, 141
CviAII CATG 4 cut(s) 203, 266, 278, 600
CviQI GTAC 4 cut(s) 70, 111, 125, 141
DdeI CTNAG 1 cut(s) 387
DpnI GATC 6 cut(s) 320, 344, 638, 643, 826, 876
DpnII GATC 6 cut(s) 318, 342, 636, 641, 824, 874
DrdI GACNNNNNNGTC 1 cut(s) 165
DseDI GACNNNNNNGTC 1 cut(s) 165
EaeI YGGCCR 1 cut(s) 99
Eam1104I CTCTTC 1 cut(s) 807
EarI CTCTTC 1 cut(s) 807
Eco105I TACGTA 1 cut(s) 610
Eco130I CCWWGG 2 cut(s) 202, 346
Eco47I GGWCC 2 cut(s) 167, 373
Eco57I CTGAAG 2 cut(s) 921, 951
EcoT14I CCWWGG 2 cut(s) 202, 346
EcoT22I ATGCAT 1 cut(s) 199
ErhI CCWWGG 2 cut(s) 202, 346
FaeI CATG 4 cut(s) 206, 269, 281, 603
FaqI GGGAC 2 cut(s) 359, 617
FatI CATG 4 cut(s) 202, 265, 277, 599
FauI CCCGC 1 cut(s) 733
FbaI TGATCA 1 cut(s) 874
Fnu4HI GCNGC 1 cut(s) 721
Fsp4HI GCNGC 1 cut(s) 721
FspBI CTAG 2 cut(s) 347, 905
GlaI GCGC 1 cut(s) 480
GluI GCNGC 1 cut(s) 721
HaeIII GGCC 4 cut(s) 19, 43, 66, 101
HapII CCGG 2 cut(s) 63, 102
HhaI GCGC 1 cut(s) 481
Hin1II CATG 4 cut(s) 206, 269, 281, 603
Hin6I GCGC 1 cut(s) 479
HinP1I GCGC 1 cut(s) 479
HindIII AAGCTT 1 cut(s) 670
HinfI GANTC 3 cut(s) 490, 713, 803
HpaII CCGG 2 cut(s) 63, 102
HphI GGTGA 2 cut(s) 165, 377
Hpy166II GTNNAC 1 cut(s) 125
Hpy188III TCNNGA 2 cut(s) 316, 322
Hpy8I GTNNAC 1 cut(s) 125
HpyAV CCTTC 5 cut(s) 158, 500, 514, 775, 845
HpyCH4III ACNGT 2 cut(s) 145, 844
HpyCH4IV ACGT 1 cut(s) 609
HpyCH4V TGCA 5 cut(s) 197, 265, 395, 472, 584
HpyF10VI GCNNNNNNNGC 1 cut(s) 478
HpyF3I CTNAG 1 cut(s) 387
HpySE526I ACGT 1 cut(s) 609
Hsp92II CATG 4 cut(s) 206, 269, 281, 603
HspAI GCGC 1 cut(s) 479
Ksp22I TGATCA 1 cut(s) 874
Kzo9I GATC 6 cut(s) 318, 342, 636, 641, 824, 874
LmnI GCTCC 1 cut(s) 866
Lsp1109I GCAGC 1 cut(s) 732
LweI GCATC 2 cut(s) 184, 466
MaeI CTAG 2 cut(s) 347, 905
MaeII ACGT 1 cut(s) 609
MaeIII GTNAC 1 cut(s) 171
MalI GATC 6 cut(s) 320, 344, 638, 643, 826, 876
MboI GATC 6 cut(s) 318, 342, 636, 641, 824, 874
MboII GAAGA 6 cut(s) 283, 286, 319, 824, 905, 908
MflI RGATCY 3 cut(s) 318, 342, 641
MluCI AATT 5 cut(s) 311, 441, 594, 625, 880
MlyI GAGTC 1 cut(s) 722
MmeI TCCRAC 3 cut(s) 429, 518, 646
Mph1103I ATGCAT 1 cut(s) 199
MroXI GAANNNNTTC 2 cut(s) 311, 595
MseI TTAA 4 cut(s) 27, 444, 542, 677
MslI CAYNNNNRTG 1 cut(s) 282
MspA1I CMGCKG 1 cut(s) 740
MspI CCGG 2 cut(s) 63, 102
Mva1269I GAATGC 2 cut(s) 197, 357
MwoI GCNNNNNNNGC 1 cut(s) 478
NcoI CCATGG 1 cut(s) 202
NdeII GATC 6 cut(s) 318, 342, 636, 641, 824, 874
NlaIII CATG 4 cut(s) 206, 269, 281, 603
NlaIV GGNNCC 1 cut(s) 375
NmuCI GTSAC 1 cut(s) 171
NsiI ATGCAT 1 cut(s) 199
NspI RCATGY 1 cut(s) 269
PaeI GCATGC 1 cut(s) 269
PctI GAATGC 2 cut(s) 197, 357
PdmI GAANNNNTTC 2 cut(s) 311, 595
PfeI GAWTC 2 cut(s) 490, 803
PflFI GACNNNGTC 1 cut(s) 410
PkrI GCNGC 1 cut(s) 722
PleI GAGTC 1 cut(s) 721
PpsI GAGTC 1 cut(s) 721
Ppu21I YACGTR 1 cut(s) 610
PshBI ATTAAT 1 cut(s) 542
PspN4I GGNNCC 1 cut(s) 375
PspPI GGNCC 4 cut(s) 18, 42, 167, 373
PsuI RGATCY 3 cut(s) 318, 342, 641
PsyI GACNNNGTC 1 cut(s) 410
RsaI GTAC 4 cut(s) 71, 112, 126, 142
RsaNI GTAC 4 cut(s) 70, 111, 125, 141
RseI CAYNNNNRTG 1 cut(s) 282
SaqAI TTAA 4 cut(s) 27, 444, 542, 677
SatI GCNGC 1 cut(s) 721
Sau3AI GATC 6 cut(s) 318, 342, 636, 641, 824, 874
Sau96I GGNCC 4 cut(s) 18, 42, 167, 373
SchI GAGTC 1 cut(s) 722
SfaNI GCATC 2 cut(s) 184, 466
SinI GGWCC 2 cut(s) 167, 373
SmiMI CAYNNNNRTG 1 cut(s) 282
SnaBI TACGTA 1 cut(s) 610
SphI GCATGC 1 cut(s) 269
Sse9I AATT 5 cut(s) 311, 441, 594, 625, 880
SsiI CCGC 1 cut(s) 740
SspI AATATT 1 cut(s) 187
SspMI CTAG 2 cut(s) 347, 905
StyI CCWWGG 2 cut(s) 202, 346
TaaI ACNGT 2 cut(s) 145, 844
TaiI ACGT 1 cut(s) 612
TaqI TCGA 4 cut(s) 33, 89, 192, 323
TasI AATT 5 cut(s) 311, 441, 594, 625, 880
TfiI GAWTC 2 cut(s) 490, 803
Tru1I TTAA 4 cut(s) 27, 444, 542, 677
Tru9I TTAA 4 cut(s) 27, 444, 542, 677
TseFI GTSAC 1 cut(s) 171
TseI GCWGC 1 cut(s) 720
Tsp45I GTSAC 1 cut(s) 171
TspDTI ATGAA 7 cut(s) 17, 105, 238, 294, 550, 588, 846
TspGWI ACGGA 1 cut(s) 159
Tth111I GACNNNGTC 1 cut(s) 410
VpaK11BI GGWCC 2 cut(s) 167, 373
VspI ATTAAT 1 cut(s) 542
XapI RAATTY 2 cut(s) 311, 625
XceI RCATGY 1 cut(s) 269
XmaJI CCTAGG 1 cut(s) 346
XmnI GAANNNNTTC 2 cut(s) 311, 595
XspI CTAG 2 cut(s) 347, 905
Zsp2I ATGCAT 1 cut(s) 199
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.