Rmu_ssc0000064.1_g000016

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000064.1
OG0000100
Physical Location & Seq
Reverse (-)
88164 .. 92770
4607 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1851 bp
atgggccaactaaaaagaaaacaaagtgaggaatccggagaagaacaatctgaagaacaatctgaaggacaaagtccagaagaaacgattggggaaaagttaaaactgataaaatggaagaaagtaaatgagagaaaaaagcgaaagcagaaaactgaagatgaagaagaaccaagtgaagatgaggaagaaacaactgaagatgaagaagaatataatgaagaacatgtccagggtaagaagacgaagaaggataaaaataagaaaactagaaaccagaaaagaaaaaaactggaaggaactgaaggtgaagaagaatctaatgaagaacaagtccacagtaagaagaagaataaggataaaaaggagaaaagaagaaacaaggaagaaactgaagatgaagaagaagaatctgatggagaagaagttcgtgccaagaagaagaagaagaaaatggataaaaggaagacaaaaaaagagagtacaaataagaaggaagaaactgacgaggaagaagatacaaaggatgatgaagaggaaaaagtcccagggaaaaggaaaagatatgtaaaagagggttatgtgcagcatcgctgtacaatgcttgcttttctgaaaacaattgcagaaaacaaaaataacctgactgaagggactttcgagctgctgcagaaaacaccctttgcaacgctgatagatgcattccatggaggttcaattaaagaaaaggatgcaaagaaatcagatgatttaatcacacttctgctacaagcatacgacagcgacacagacctttttgtgtttggaaacaggaaattcagaatgtcaacaagtgatatatctatgattttaggagtgccgggatccgggttatcagtaccaaaaaccaaagaaggggcatacagatatgagttcgtgactaaatactttgacaaaaagcagaggatcaacaaggcagttgcagaggaagctttgaagaaggcattggcagaaactccagagacaggggaagaaaaaacgaaacgggacaaaaatgttgctgtattagtactcttgaaccttttcatcaaactcctattcccaaactctggaggaacaatatcttgggactatataagagtctgtgaagaggtggaaagtctgggaaaatatagctgggcaaaggaagttggcgacttccttaaaaaatcaattaaacgaaagggaaaagaatctcaaaacatggcaggttgcatgatattggtgatgataaaccatgtcactggtcttgtcactggtcttattaatgttgtagggttccaactagtcagcgtattattctgggagggaaaagaggctggaagcgaaatcacaagggcagatgtcaaaatgttcataagcgatcaatcaatagcaaacaactggattgattgctatggggaaatgttgaaggatgaaatgcaaaacgaaagttcacgaagtttgggaagatttgcttttatgcatagcatgtgttgggttgaaatggtcaagctgtggatgagagcagtaaaagatcaagcagacgatatgctgcagcaaggctgccgaatgaaatttgacaagagtcaaagcactcgcacaaaattaaagatggttaaaagtattttgagcgatgatgagataagaacaataaggtggataaaggaaaattatgacggtggaaggatccctttttaccatgctagaatctgcccccaacaagacgaaggatcaatggcaaaagaggagaagatgccaaacaaagtcaccaaagcccagatggtgaaattcaaagctcaaatattcaaaaaatttgctgaacataagcagagctggaactcagcaaattaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1985 PMD

Protein Analysis

616

Amino Acids

71.42

Weight (kDa)

8.28

Isoelectric Point (pI)

58.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000100)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr6g0248691
rosa_multiflora Rmu_co8124940.1_g000001 Rmu_co8378695.1_g000001 Rmu_sc0000023.1_g000005 Rmu_sc0000149.1_g000044 Rmu_sc0000195.1_g000019 Rmu_sc0000270.1_g000002 Rmu_sc0000270.1_g000003 Rmu_sc0000433.1_g000016 Rmu_sc0000493.1_g000067 Rmu_sc0000493.1_g000069 Rmu_sc0000493.1_g000070 Rmu_sc0000493.1_g000071 Rmu_sc0000532.1_g000015 Rmu_sc0000532.1_g000017 Rmu_sc0000552.1_g000004 Rmu_sc0000692.1_g000012 Rmu_sc0000733.1_g000017 Rmu_sc0000738.1_g000026 Rmu_sc0000738.1_g000027 Rmu_sc0000738.1_g000028 Rmu_sc0000738.1_g000030 Rmu_sc0000806.1_g000006 Rmu_sc0000863.1_g000026 Rmu_sc0000863.1_g000027 Rmu_sc0000863.1_g000028 Rmu_sc0000863.1_g000029 Rmu_sc0000863.1_g000030 Rmu_sc0000885.1_g000001 Rmu_sc0001168.1_g000020 Rmu_sc0001168.1_g000021 Rmu_sc0001214.1_g000031 Rmu_sc0001214.1_g000032 Rmu_sc0001239.1_g000003 Rmu_sc0001355.1_g000003 Rmu_sc0001373.1_g000008 Rmu_sc0001373.1_g000009 Rmu_sc0001373.1_g000010 Rmu_sc0001587.1_g000003 Rmu_sc0001648.1_g000020 Rmu_sc0001648.1_g000021 Rmu_sc0001648.1_g000022 Rmu_sc0001648.1_g000023 Rmu_sc0001836.1_g000052 Rmu_sc0001836.1_g000053 Rmu_sc0001913.1_g000025 Rmu_sc0001913.1_g000030 Rmu_sc0001938.1_g000005 Rmu_sc0001938.1_g000007 Rmu_sc0001977.1_g000016 Rmu_sc0001977.1_g000017 Rmu_sc0001977.1_g000018 Rmu_sc0001977.1_g000019 Rmu_sc0002080.1_g000031 Rmu_sc0002095.1_g000011 Rmu_sc0002095.1_g000012 Rmu_sc0002202.1_g000002 Rmu_sc0002202.1_g000004 Rmu_sc0002765.1_g000012 Rmu_sc0002955.1_g000003 Rmu_sc0002983.1_g000001 Rmu_sc0002983.1_g000002 Rmu_sc0002983.1_g000005 Rmu_sc0002983.1_g000006 Rmu_sc0003832.1_g000010 Rmu_sc0003880.1_g000041 Rmu_sc0003880.1_g000043 Rmu_sc0003981.1_g000011 Rmu_sc0003981.1_g000016 Rmu_sc0004118.1_g000013 Rmu_sc0004125.1_g000008 Rmu_sc0004155.1_g000007 Rmu_sc0004155.1_g000008 Rmu_sc0004155.1_g000009 Rmu_sc0004465.1_g000004 Rmu_sc0004465.1_g000005 Rmu_sc0004755.1_g000030 Rmu_sc0005014.1_g000009 Rmu_sc0005023.1_g000027 Rmu_sc0005446.1_g000019 Rmu_sc0006273.1_g000001 Rmu_sc0006948.1_g000020 Rmu_sc0007412.1_g000005 Rmu_sc0007996.1_g000001 Rmu_sc0009749.1_g000002 Rmu_sc0011497.1_g000008 Rmu_sc0011497.1_g000009 Rmu_sc0011497.1_g000010 Rmu_sc0012018.1_g000001 Rmu_sc0012347.1_g000004 Rmu_sc0012347.1_g000005 Rmu_sc0013290.1_g000001 Rmu_sc0013576.1_g000009 Rmu_sc0013576.1_g000011 Rmu_sc0014354.1_g000001 Rmu_sc0014482.1_g000006 Rmu_sc0016848.1_g000001 Rmu_sc0018723.1_g000002 Rmu_sc0018723.1_g000003 Rmu_sc0020085.1_g000001 Rmu_sc0022367.1_g000001 Rmu_sc0023661.1_g000001 Rmu_sc0030814.1_g000001 Rmu_sc0034982.1_g000001 Rmu_sc0036901.1_g000001 Rmu_ssc0000064.1_g000016 Rmu_ssc0000170.1_g000012 Rmu_ssc0000170.1_g000014 Rmu_ssc0000189.1_g000048 Rmu_ssc0000443.1_g000005
rosa_roxburghii Rroxscaffold_159G00432950 Rroxscaffold_1G00015760 Rroxscaffold_1G00015770 Rroxscaffold_1G00015780 Rroxscaffold_1G00015950 Rroxscaffold_1G00015980 Rroxscaffold_1G00018050 Rroxscaffold_1G00018060 Rroxscaffold_1G00020330 Rroxscaffold_1G00020340 Rroxscaffold_1G00020350 Rroxscaffold_1G00020370 Rroxscaffold_1G00021720 Rroxscaffold_1G00034800 Rroxscaffold_1G00036050 Rroxscaffold_1G00036060 Rroxscaffold_1G00036070 Rroxscaffold_1G00036160 Rroxscaffold_1G00036170 Rroxscaffold_1G00043200 Rroxscaffold_1G00043210 Rroxscaffold_1G00047700 Rroxscaffold_1G00055120 Rroxscaffold_1G00056300 Rroxscaffold_1G00056320 Rroxscaffold_1G00064030 Rroxscaffold_1G00064050 Rroxscaffold_1G00064110 Rroxscaffold_1G00064130 Rroxscaffold_1G00064140 Rroxscaffold_1G00069580 Rroxscaffold_1G00069590 Rroxscaffold_1G00069600 Rroxscaffold_2G00086000 Rroxscaffold_2G00095520 Rroxscaffold_2G00095530 Rroxscaffold_2G00102950 Rroxscaffold_2G00102960 Rroxscaffold_2G00102980 Rroxscaffold_2G00111430 Rroxscaffold_2G00111440 Rroxscaffold_2G00123850 Rroxscaffold_2G00123860 Rroxscaffold_2G00123870 Rroxscaffold_2G00127600 Rroxscaffold_2G00128430 Rroxscaffold_2G00128440 Rroxscaffold_2G00134550 Rroxscaffold_2G00134560 Rroxscaffold_2G00134570 Rroxscaffold_2G00150440 Rroxscaffold_2G00150450 Rroxscaffold_3G00221670 Rroxscaffold_3G00231550 Rroxscaffold_3G00231560 Rroxscaffold_3G00231580 Rroxscaffold_3G00231590 Rroxscaffold_3G00238200 Rroxscaffold_3G00238210 Rroxscaffold_3G00259430 Rroxscaffold_3G00271580 Rroxscaffold_3G00271590 Rroxscaffold_4G00277030 Rroxscaffold_4G00277050 Rroxscaffold_4G00277060 Rroxscaffold_4G00277070 Rroxscaffold_4G00293250 Rroxscaffold_4G00293260 Rroxscaffold_4G00300140 Rroxscaffold_4G00308740 Rroxscaffold_4G00309540 Rroxscaffold_4G00319500 Rroxscaffold_4G00325410 Rroxscaffold_4G00328420 Rroxscaffold_4G00329630 Rroxscaffold_5G00339100 Rroxscaffold_5G00339110 Rroxscaffold_5G00339130 Rroxscaffold_5G00349460 Rroxscaffold_5G00349470 Rroxscaffold_5G00349480 Rroxscaffold_5G00349490 Rroxscaffold_5G00349800 Rroxscaffold_5G00354000 Rroxscaffold_5G00357420 Rroxscaffold_5G00357430 Rroxscaffold_5G00366730 Rroxscaffold_5G00366740 Rroxscaffold_5G00366750 Rroxscaffold_5G00371380 Rroxscaffold_5G00371390 Rroxscaffold_5G00371410 Rroxscaffold_6G00390390 Rroxscaffold_6G00390400 Rroxscaffold_6G00390410 Rroxscaffold_6G00391800 Rroxscaffold_6G00391810 Rroxscaffold_6G00399200 Rroxscaffold_6G00403500 Rroxscaffold_6G00403510 Rroxscaffold_6G00403520 Rroxscaffold_6G00407230 Rroxscaffold_6G00411100 Rroxscaffold_6G00411700 Rroxscaffold_6G00415300 Rroxscaffold_6G00415310 Rroxscaffold_6G00422180 Rroxscaffold_6G00422200 Rroxscaffold_6G00422210 Rroxscaffold_7G00157710 Rroxscaffold_7G00157720 Rroxscaffold_7G00157740 Rroxscaffold_7G00194140 Rroxscaffold_7G00196750 Rroxscaffold_7G00197960 Rroxscaffold_7G00208750 Rroxscaffold_7G00208760 Rroxscaffold_7G00208780 Rroxscaffold_7G00213740 Rroxscaffold_7G00215180 Rroxscaffold_7G00215190 Rroxscaffold_7G00215200
rosa_rugosa Rorug03G0270600 Rorug05G0169200
rosa_samantha Rh1AG048500 Rh1AG091500 Rh1AG190900 Rh2BG351700 Rh2BG494300 Rh2BG539800 Rh3BG209100 Rh4CG136600 Rh4CG194800 Rh4CG381100 Rh5BG080500 Rh5BG083000 Rh5BG083100 Rh5BG124000 Rh5BG126200 Rh5BG131000 Rh5BG158900 Rh5BG284300 Rh5BG310800 Rh5BG437700 Rh6AG114700 Rh6AG126300 Rh6AG202500 Rh7CG009000 Rh7CG320700 Rh7CG355200 Rh7CG514200
rosa_wichuraiana Rw5G018600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1217
AccB7I CCANNNNNTGG 1 cut(s) 1088
AccIII TCCGGA 1 cut(s) 35
AclWI GGATC 6 cut(s) 858, 871, 953, 1681, 1694, 1738
AcsI RAATTY 4 cut(s) 815, 1574, 1787, 1811
AcuI CTGAAG 7 cut(s) 72, 84, 177, 219, 324, 414, 669
AfaI GTAC 4 cut(s) 484, 598, 879, 1050
AfiI CCNNNNNNNGG 4 cut(s) 866, 894, 1004, 1088
AflIII ACRYGT 1 cut(s) 226
AgsI TTSAA 7 cut(s) 717, 976, 1057, 1429, 1502, 1792, 1807
AhlI ACTAGT 1 cut(s) 1303
AjnI CCWGG 2 cut(s) 231, 547
AjuI GAANNNNNNNTTGG 6 cut(s) 72, 104, 968, 1000, 1087, 1119
AloI GAACNNNNNNTCC 2 cut(s) 411, 443
AluBI AGCT 6 cut(s) 664, 971, 1155, 1513, 1796, 1833
AluI AGCT 6 cut(s) 664, 971, 1155, 1513, 1796, 1833
Alw26I GTCTC 1 cut(s) 995
AlwI GGATC 6 cut(s) 858, 871, 953, 1681, 1694, 1738
Aor13HI TCCGGA 1 cut(s) 35
AoxI GGCC 1 cut(s) 4
ApeKI GCWGC 6 cut(s) 586, 664, 667, 1552, 1555, 1563
ApoI RAATTY 4 cut(s) 815, 1574, 1787, 1811
AseI ATTAAT 1 cut(s) 1284
Asp700I GAANNNNTTC 2 cut(s) 426, 1061
AspS9I GGNCC 1 cut(s) 4
AsuC2I CCSGG 2 cut(s) 861, 868
AsuHPI GGTGA 4 cut(s) 320, 1255, 1759, 1795
BamHI GGATCC 2 cut(s) 863, 1686
BbsI GAAGAC 2 cut(s) 248, 473
BbvI GCAGC 6 cut(s) 598, 651, 654, 1539, 1550, 1567
BccI CCATC 3 cut(s) 410, 1606, 1774
BciT130I CCWGG 2 cut(s) 233, 549
BcnI CCSGG 2 cut(s) 861, 868
BcoDI GTCTC 1 cut(s) 995
BcuI ACTAGT 1 cut(s) 1303
BfaI CTAG 3 cut(s) 270, 1304, 1704
BfmI CTRYAG 2 cut(s) 668, 1553
BfuAI ACCTGC 1 cut(s) 1217
BisI GCNGC 6 cut(s) 587, 665, 668, 1553, 1556, 1564
BlsI GCNGC 6 cut(s) 588, 666, 669, 1554, 1557, 1565
BmcAI AGTACT 1 cut(s) 1050
Bme1390I CCNGG 4 cut(s) 233, 549, 861, 868
BmgT120I GGNCC 1 cut(s) 4
BmiI GGNNCC 3 cut(s) 865, 1298, 1688
BmrFI CCNGG 4 cut(s) 233, 549, 861, 868
BmsI GCATC 4 cut(s) 598, 688, 721, 1743
BoxI GACNNNNGTC 1 cut(s) 1584
BpiI GAAGAC 2 cut(s) 248, 473
BpmI CTGGAG 2 cut(s) 981, 1110
BpuMI CCSGG 2 cut(s) 861, 868
BsaJI CCNNGG 4 cut(s) 232, 547, 548, 706
BsaWI WCCGGW 1 cut(s) 35
BsaXI ACNNNNNCTCC 2 cut(s) 411, 441
Bsc4I CCNNNNNNNGG 4 cut(s) 866, 894, 1004, 1088
Bse1I ACTGG 4 cut(s) 297, 1267, 1279, 1406
BseAI TCCGGA 1 cut(s) 35
BseBI CCWGG 2 cut(s) 233, 549
BseDI CCNNGG 4 cut(s) 232, 547, 548, 706
BseGI GGATG 4 cut(s) 532, 736, 1438, 1524
BseLI CCNNNNNNNGG 4 cut(s) 866, 894, 1004, 1088
BseNI ACTGG 4 cut(s) 297, 1267, 1279, 1406
BseRI GAGGAG 1 cut(s) 1760
BseXI GCAGC 6 cut(s) 598, 651, 654, 1539, 1550, 1567
BseYI CCCAGC 1 cut(s) 1155
BsgI GTGCAG 1 cut(s) 605
BshFI GGCC 1 cut(s) 6
BsiSI CCGG 3 cut(s) 36, 860, 867
BslFI GGGAC 4 cut(s) 530, 667, 1040, 1121
BslI CCNNNNNNNGG 4 cut(s) 866, 894, 1004, 1088
BsmAI GTCTC 1 cut(s) 995
BsmFI GGGAC 4 cut(s) 530, 667, 1040, 1121
BsmI GAATGC 1 cut(s) 701
BsnI GGCC 1 cut(s) 6
Bsp13I TCCGGA 1 cut(s) 35
Bsp1407I TGTACA 1 cut(s) 596
Bsp143I GATC 6 cut(s) 863, 945, 1381, 1534, 1686, 1730
Bsp19I CCATGG 1 cut(s) 706
BspANI GGCC 1 cut(s) 6
BspEI TCCGGA 1 cut(s) 35
BspLI GGNNCC 3 cut(s) 865, 1298, 1688
BspMAI CTGCAG 2 cut(s) 672, 1557
BspMI ACCTGC 1 cut(s) 1217
BspPI GGATC 6 cut(s) 858, 871, 953, 1681, 1694, 1738
BsrGI TGTACA 1 cut(s) 596
BsrI ACTGG 4 cut(s) 297, 1267, 1279, 1406
BssECI CCNNGG 4 cut(s) 232, 547, 548, 706
BssMI GATC 6 cut(s) 863, 945, 1381, 1534, 1686, 1730
BssT1I CCWWGG 1 cut(s) 706
Bst2UI CCWGG 2 cut(s) 233, 549
Bst4CI ACNGT 2 cut(s) 341, 1679
Bst6I CTCTTC 2 cut(s) 528, 1122
BstAUI TGTACA 1 cut(s) 596
BstC8I GCNNGC 1 cut(s) 606
BstDEI CTNAG 1 cut(s) 1840
BstDSI CCRYGG 1 cut(s) 706
BstF5I GGATG 4 cut(s) 532, 736, 1438, 1524
BstKTI GATC 6 cut(s) 866, 948, 1384, 1537, 1689, 1733
BstMAI GTCTC 1 cut(s) 995
BstMBI GATC 6 cut(s) 863, 945, 1381, 1534, 1686, 1730
BstMWI GCNNNNNNNGC 1 cut(s) 968
BstNI CCWGG 2 cut(s) 233, 549
BstNSI RCATGY 2 cut(s) 230, 1492
BstPAI GACNNNNGTC 1 cut(s) 1584
BstSCI CCNGG 4 cut(s) 231, 547, 859, 866
BstSFI CTRYAG 2 cut(s) 668, 1553
BstV1I GCAGC 6 cut(s) 598, 651, 654, 1539, 1550, 1567
BstV2I GAAGAC 2 cut(s) 248, 473
BstX2I RGATCY 2 cut(s) 863, 1686
BstXI CCANNNNNNTGG 1 cut(s) 1262
BstYI RGATCY 2 cut(s) 863, 1686
BsuRI GGCC 1 cut(s) 6
BtgI CCRYGG 1 cut(s) 706
BtgZI GCGATG 2 cut(s) 575, 1647
BtsCI GGATG 4 cut(s) 532, 736, 1438, 1524
BtsIMutI CAGTG 2 cut(s) 1260, 1272
BveI ACCTGC 1 cut(s) 1217
Cac8I GCNNGC 1 cut(s) 606
Cfr13I GGNCC 1 cut(s) 4
Csp6I GTAC 4 cut(s) 483, 597, 878, 1049
CviAII CATG 7 cut(s) 227, 707, 1222, 1234, 1256, 1489, 1700
CviQI GTAC 4 cut(s) 483, 597, 878, 1049
DdeI CTNAG 1 cut(s) 1840
DpnI GATC 6 cut(s) 865, 947, 1383, 1536, 1688, 1732
DpnII GATC 6 cut(s) 863, 945, 1381, 1534, 1686, 1730
Eam1104I CTCTTC 2 cut(s) 528, 1122
EarI CTCTTC 2 cut(s) 528, 1122
Eco130I CCWWGG 1 cut(s) 706
Eco57I CTGAAG 7 cut(s) 72, 84, 177, 219, 324, 414, 669
EcoRII CCWGG 2 cut(s) 231, 547
EcoT14I CCWWGG 1 cut(s) 706
EcoT22I ATGCAT 2 cut(s) 703, 1485
ErhI CCWWGG 1 cut(s) 706
FaeI CATG 7 cut(s) 230, 710, 1225, 1237, 1259, 1492, 1703
FalI AAGNNNNNCTT 4 cut(s) 1459, 1491, 1675, 1707
FaqI GGGAC 4 cut(s) 530, 667, 1040, 1121
FatI CATG 7 cut(s) 226, 706, 1221, 1233, 1255, 1488, 1699
Fnu4HI GCNGC 6 cut(s) 587, 665, 668, 1553, 1556, 1564
FokI GGATG 4 cut(s) 539, 743, 1445, 1531
Fsp4HI GCNGC 6 cut(s) 587, 665, 668, 1553, 1556, 1564
FspBI CTAG 3 cut(s) 270, 1304, 1704
GluI GCNGC 6 cut(s) 587, 665, 668, 1553, 1556, 1564
GsaI CCCAGC 1 cut(s) 1159
GsuI CTGGAG 2 cut(s) 981, 1110
HaeIII GGCC 1 cut(s) 6
HapII CCGG 3 cut(s) 36, 860, 867
Hin1II CATG 7 cut(s) 230, 710, 1225, 1237, 1259, 1492, 1703
HincII GTYRAC 1 cut(s) 828
HindII GTYRAC 1 cut(s) 828
HindIII AAGCTT 1 cut(s) 969
HinfI GANTC 7 cut(s) 32, 317, 410, 1119, 1211, 1585, 1707
HpaII CCGG 3 cut(s) 36, 860, 867
HphI GGTGA 4 cut(s) 320, 1255, 1759, 1795
Hpy166II GTNNAC 3 cut(s) 337, 828, 1454
Hpy188I TCNGA 6 cut(s) 52, 64, 415, 615, 745, 821
Hpy188III TCNNGA 7 cut(s) 36, 77, 916, 998, 1054, 1089, 1455
Hpy8I GTNNAC 3 cut(s) 337, 828, 1454
HpyCH4III ACNGT 2 cut(s) 341, 1679
HpyF10VI GCNNNNNNNGC 1 cut(s) 968
HpyF3I CTNAG 1 cut(s) 1840
Hsp92II CATG 7 cut(s) 230, 710, 1225, 1237, 1259, 1492, 1703
Kpn2I TCCGGA 1 cut(s) 35
Kzo9I GATC 6 cut(s) 863, 945, 1381, 1534, 1686, 1730
Lsp1109I GCAGC 6 cut(s) 598, 651, 654, 1539, 1550, 1567
LweI GCATC 4 cut(s) 598, 688, 721, 1743
MaeI CTAG 3 cut(s) 270, 1304, 1704
MaeIII GTNAC 4 cut(s) 916, 1258, 1270, 1765
MalI GATC 6 cut(s) 865, 947, 1383, 1536, 1688, 1732
MboI GATC 6 cut(s) 863, 945, 1381, 1534, 1686, 1730
MfeI CAATTG 1 cut(s) 621
MflI RGATCY 2 cut(s) 863, 1686
MlyI GAGTC 2 cut(s) 1128, 1594
MmeI TCCRAC 1 cut(s) 1324
Mph1103I ATGCAT 2 cut(s) 703, 1485
MroI TCCGGA 1 cut(s) 35
MroXI GAANNNNTTC 2 cut(s) 426, 1061
MseI TTAA 9 cut(s) 101, 720, 752, 1182, 1194, 1284, 1607, 1617, 1849
MspI CCGG 3 cut(s) 36, 860, 867
MspR9I CCNGG 4 cut(s) 233, 549, 861, 868
MunI CAATTG 1 cut(s) 621
Mva1269I GAATGC 1 cut(s) 701
MvaI CCWGG 2 cut(s) 233, 549
MwoI GCNNNNNNNGC 1 cut(s) 968
NciI CCSGG 2 cut(s) 861, 868
NcoI CCATGG 1 cut(s) 706
NdeII GATC 6 cut(s) 863, 945, 1381, 1534, 1686, 1730
NlaIII CATG 7 cut(s) 230, 710, 1225, 1237, 1259, 1492, 1703
NlaIV GGNNCC 3 cut(s) 865, 1298, 1688
NmuCI GTSAC 4 cut(s) 916, 1258, 1270, 1765
NsiI ATGCAT 2 cut(s) 703, 1485
NspI RCATGY 2 cut(s) 230, 1492
PasI CCCWGGG 1 cut(s) 548
PciI ACATGT 1 cut(s) 226
PctI GAATGC 1 cut(s) 701
PdmI GAANNNNTTC 2 cut(s) 426, 1061
PfeI GAWTC 5 cut(s) 32, 317, 410, 1211, 1707
PflFI GACNNNGTC 1 cut(s) 72
PflMI CCANNNNNTGG 1 cut(s) 1088
PkrI GCNGC 6 cut(s) 588, 666, 669, 1554, 1557, 1565
PleI GAGTC 2 cut(s) 1127, 1593
PpsI GAGTC 2 cut(s) 1127, 1593
PscI ACATGT 1 cut(s) 226
PshAI GACNNNNGTC 1 cut(s) 1584
PshBI ATTAAT 1 cut(s) 1284
Psp6I CCWGG 2 cut(s) 231, 547
PspFI CCCAGC 1 cut(s) 1155
PspGI CCWGG 2 cut(s) 231, 547
PspN4I GGNNCC 3 cut(s) 865, 1298, 1688
PspPI GGNCC 1 cut(s) 4
PstI CTGCAG 2 cut(s) 672, 1557
PsuI RGATCY 2 cut(s) 863, 1686
PsyI GACNNNGTC 1 cut(s) 72
RsaI GTAC 4 cut(s) 484, 598, 879, 1050
RsaNI GTAC 4 cut(s) 483, 597, 878, 1049
SaqAI TTAA 9 cut(s) 101, 720, 752, 1182, 1194, 1284, 1607, 1617, 1849
SatI GCNGC 6 cut(s) 587, 665, 668, 1553, 1556, 1564
Sau3AI GATC 6 cut(s) 863, 945, 1381, 1534, 1686, 1730
Sau96I GGNCC 1 cut(s) 4
ScaI AGTACT 1 cut(s) 1050
SchI GAGTC 2 cut(s) 1128, 1594
ScrFI CCNGG 4 cut(s) 233, 549, 861, 868
SfaNI GCATC 4 cut(s) 598, 688, 721, 1743
SfcI CTRYAG 2 cut(s) 668, 1553
SpeI ACTAGT 1 cut(s) 1303
SspI AATATT 1 cut(s) 1803
SspMI CTAG 3 cut(s) 270, 1304, 1704
StyD4I CCNGG 4 cut(s) 231, 547, 859, 866
StyI CCWWGG 1 cut(s) 706
TaaI ACNGT 2 cut(s) 341, 1679
TaqI TCGA 1 cut(s) 660
TatI WGTACW 3 cut(s) 482, 596, 1048
TfiI GAWTC 5 cut(s) 32, 317, 410, 1211, 1707
Tru1I TTAA 9 cut(s) 101, 720, 752, 1182, 1194, 1284, 1607, 1617, 1849
Tru9I TTAA 9 cut(s) 101, 720, 752, 1182, 1194, 1284, 1607, 1617, 1849
TscAI CASTG 2 cut(s) 1267, 1279
TseFI GTSAC 4 cut(s) 916, 1258, 1270, 1765
TseI GCWGC 6 cut(s) 586, 664, 667, 1552, 1555, 1563
Tsp45I GTSAC 4 cut(s) 916, 1258, 1270, 1765
TspRI CASTG 2 cut(s) 1267, 1279
Tth111I GACNNNGTC 1 cut(s) 72
Van91I CCANNNNNTGG 1 cut(s) 1088
VspI ATTAAT 1 cut(s) 1284
XapI RAATTY 4 cut(s) 815, 1574, 1787, 1811
XceI RCATGY 2 cut(s) 230, 1492
XcmI CCANNNNNNNNNTGG 1 cut(s) 1777
XmnI GAANNNNTTC 2 cut(s) 426, 1061
XspI CTAG 3 cut(s) 270, 1304, 1704
ZrmI AGTACT 1 cut(s) 1050
Zsp2I ATGCAT 2 cut(s) 703, 1485
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.