FvH4_4g15990

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0000124
Physical Location & Seq
Reverse (-)
19941195 .. 19943967
2773 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g15990.t1

Sequence Viewer

Length: 2058 bp
ATGAGCACGCGGCGAGGATCTCTCTTCAACTCCCTTTGTGCCACACCTCCTCGATTGACACGGGAGTCGGTGGCGATATCGGATCTTGCCGACTTCGCCACCACTGTATCCGGTTTATTCGAACCGAAGGTGGTCACAGTTACAAAGTTGGGGTGGGACTCCTTCCTCAACATCAGTTGTCCTCGCCTCGTTGGTCCAATATGGAGACTGATGATTAATGGGACTCACGTGGAGAACCAAATCGTCACTGTGCTCAGACATGAGTTTGAGCTATATGGGGCCTCTTTTGAGCATTGCGACTTCGATTTCGGTCGTACAACATATATCACAGAGTATGGGTCGTTGGTTGCGCAGCTGAGCGACTCACAAGGGAAGATTCAGTCTTCACGTCAGAAGGAGATAGTCCGCGAACGTGAAGAGGCGGATGATCTTTTCAAGATCTCGTATTGCTTGTTGGCACTGTCGCAGGTTCTATGCTTGACGACATCTTGTGATGTTGACTCGTCCCTCATCTTGCCTCTTCTTGAGACATGCCACATCAGACGAAAGAACTGGGCATCTTTCTGTGTGAGAAAGTTGCTGGATGCCGTTAGCACCCAGAGAGAAAGCGGTGAGAGGCAAGTCGGCGGGTGTCTACTGTACTACCAACTAATGTACGTAGACTATGTGAGTTCCTCTTGTGGTGTTTACGCTAATACCGACATTCTTCCGCTAATGGCACGGGGAGAGGATGAGGTGAAGAAAGTCATCCGCAAGCTTAGAGAACTAGGGGATGTGCAAAGCCCTGTTGAGTTATCAGATAAGAACAAGCGCGTTAGGACCTTTACCAATTCCTCCTCCGACCACAACGGAGCCTCTGGGTTTGCCATAAGGCACTCGGTTCACGAGGACATATTCGAGTTAAAGCTTCAGATGGGGAGGGTCAAGGACGATGTGTGGAATCTAAGTGAAAAACTTGGAAAGATTCAGCTAGAACTGGCTCTTCTGTCGATGCGAGTAGAGGCAATAGCACACCAAATCAGTTTAATGAGCAAAGACTGTGCGAAGATGGTAAAGGCCCAGTTGCCGGTGTCGTTGGGCGGCAAGGGGAACCGGTGCCACTGCCAGACAGTGCAGACTCCACCAAAGAGGTGCCGAGAAGGAAATGGACGTTCGACCATTAAGGCTGACTGGATTACCGAAACTGTAGATGCGCAGGAGCAAGTAAAGGAATTGAGTAAAGTAACTAGGGCTGCTTCAGCCATCTCCAGCAGTCCGGGCGCACCTCTTGAGAAGACAAGAAGATCAAGAAAGGAAAGACTTTTCCAGTCGGCTATATCTGCCCATCAAAGGTCGTTGTTCACATACACAGTCAAGCACAAGGCTACTGAAAACTGTCATATGAACCACAAACCAAGCAGTCCCTACGGACCGCTGATGATGCTTATAAGCAGCGACGATAACCTTTTAATAAATTACGTCATGGCGAAGACGTCCACAGAGGGTTCTGGTCGCCTCAACTGGGGAAGGGCGAGAAATATTGAAACGGAAGGATATTTCATGCCTTGCGCCTGGGAAAATGGTGGACAGCTACTCATCGACTATGTAGCACTGGCCCTTTCCAAGAAGTGTGATGAGGAGACCAGAATAGTATGCGGACTGGAGAGATGGGATGGAAAGCTGGCCCAGTGTAAAAAGATGTTCTTACCTATCTTCGACGGGTCGGTCGGGGGGCACTGGATTCTCCTACTTGTAGACATGGACAAAAGGACTGCTGAGGTCTGGGACAGTGCCTCGTCTGTCTTTTCAAAGACCACTAGGTGGAATATTGTGTCTAAAACGCTTGACCATCTGGACAGGTGCTTCGCATACGAGAAGTTGGAAGTTTCAGGGAAGCTCTTTGATTTTGTGTACTTCCCACAGTTTGAGCCTCGAGGGTCGAATGAATATCGGGTGAGGCTGCTGCTCAAGTGCCTCATCGCCCCCATGAAGGAAATATGGAGAGAGACGCTTGAGGCTGCCAAGGTCTTCGTTGCATCAAAGACACCTGACCCCGGTAACATGTTTGATGATTTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
HMG_box

Protein Analysis

686

Amino Acids

77.3

Weight (kDa)

8.43

Isoelectric Point (pI)

41.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000124)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g10992 FvH4_2g25150 FvH4_2g27910 FvH4_2g27931 FvH4_4g09443 FvH4_4g09490 FvH4_4g15990 FvH4_4g15991 FvH4_6g07180 FvH4_6g40320 FvH4_7g10222 FvH4_7g10251
rosa_chinensis RchiOBHm_Chr2g0155611
rosa_laevigata RLG00000009253 RLG00000009254 RLG00000011848 RLG00000017301 RLG00000017302 RLG00000034909
rosa_multiflora Rmu_co8063658.1_g000001 Rmu_co8240443.1_g000001 Rmu_co8264451.1_g000001 Rmu_co8381937.1_g000001 Rmu_co8419903.1_g000001 Rmu_co8513405.1_g000002 Rmu_co8522915.1_g000001 Rmu_co8522915.1_g000004 Rmu_sc0000279.1_g000024 Rmu_sc0000279.1_g000048 Rmu_sc0000642.1_g000017 Rmu_sc0002045.1_g000015 Rmu_sc0002045.1_g000018 Rmu_sc0002045.1_g000023 Rmu_sc0002045.1_g000028 Rmu_sc0003047.1_g000008 Rmu_sc0003179.1_g000019 Rmu_sc0003179.1_g000020 Rmu_sc0003179.1_g000022 Rmu_sc0003179.1_g000023 Rmu_sc0003422.1_g000011 Rmu_sc0004999.1_g000014 Rmu_sc0005712.1_g000018 Rmu_sc0005712.1_g000023 Rmu_sc0006198.1_g000019 Rmu_sc0006373.1_g000005 Rmu_sc0006514.1_g000028 Rmu_sc0006514.1_g000031 Rmu_sc0007367.1_g000010 Rmu_sc0011475.1_g000002 Rmu_sc0025304.1_g000001 Rmu_ssc0000161.1_g000030 Rmu_ssc0000161.1_g000032 Rmu_ssc0000387.1_g000018
rosa_roxburghii Rroxscaffold_1G00031090 Rroxscaffold_1G00032770 Rroxscaffold_1G00068950 Rroxscaffold_1G00069000 Rroxscaffold_1G00069010 Rroxscaffold_2G00129060 Rroxscaffold_2G00129100 Rroxscaffold_4G00309310 Rroxscaffold_4G00309320 Rroxscaffold_5G00350620 Rroxscaffold_5G00350630 Rroxscaffold_7G00162650 Rroxscaffold_7G00162660 Rroxscaffold_7G00162710
rosa_rugosa Rorug02G0564700 Rorug02G0564700 Rorug03G0343100 Rorug04G0189700 Rorug05G0102800 Rorug05G0102900 Rorug05G0103000 Rorug05G0106500 Rorug05G0106600 Rorug05G0106700 Rorug05G0252800 Rorug07G0182100 Rorug07G0283500 Rorug07G0283600
rosa_samantha Rh1AG004000 Rh1AG004100 Rh1AG004200 Rh1AG004400 Rh1AG004500 Rh1AG004600 Rh1AG004800 Rh1AG004900 Rh1AG005300 Rh1AG007000 Rh1AG115000 Rh1CG049400 Rh1CG055400 Rh1CG111000 Rh1DG053600 Rh1DG053700 Rh1DG059300 Rh1DG119700 Rh1DG177100 Rh1DG177200 Rh2AG353800 Rh2AG354000 Rh2AG354100 Rh2AG354300 Rh2AG354400 Rh2AG354500 Rh2AG354600 Rh2AG354700 Rh2AG642300 Rh2AG642400 Rh2AG642500 Rh2BG336500 Rh2BG336600 Rh2BG336700 Rh2BG336800 Rh2BG336900 Rh2CG299900 Rh2CG300000 Rh2CG300100 Rh2DG337000 Rh2DG337100 Rh3AG246600 Rh3BG121900 Rh3BG122300 Rh3BG122600 Rh3BG122700 Rh3DG304800 Rh3DG304900 Rh4AG148800 Rh4AG249000 Rh4AG249100 Rh4AG249200 Rh4BG182700 Rh4BG182800 Rh4BG182900 Rh4BG254400 Rh4BG254500 Rh4BG254600 Rh4CG155500 Rh4CG155700 Rh4DG057900 Rh4DG058000 Rh4DG058100 Rh4DG058200 Rh4DG129100 Rh5AG364500 Rh5AG364600 Rh5AG364800 Rh5AG365300 Rh5CG363700 Rh5CG497600 Rh5DG239500 Rh5DG239600 Rh6AG173500 Rh6AG175400 Rh6BG075900 Rh6BG076300 Rh6BG076400 Rh6BG076500 Rh6BG076600 Rh6CG151000 Rh6CG151200 Rh6CG151300 Rh6CG151400 Rh6CG205200 Rh6CG205300 Rh6CG419700 Rh6CG419900 Rh6CG420100 Rh6DG498700 Rh6DG498800 Rh7AG329000 Rh7AG329100 Rh7AG329300 Rh7AG329400 Rh7AG353000 Rh7AG353100 Rh7AG353300 Rh7AG353400 Rh7AG353500 Rh7CG346400 Rh7CG346500 Rh7CG346700 Rh7CG370800 Rh7CG370900 Rh7CG371000 Rh7CG371100 Rh7DG325000 Rh7DG325100 Rh7DG325200 Rh7DG325300 Rh7DG353100 Rh7DG353200 Rh7DG353300 Rh7DG363500 Rh7DG364000
rosa_wichuraiana Rw0G002290 Rw0G012780 Rw1G000260 Rw1G000270 Rw1G010400 Rw1G010410 Rw1G010420 Rw1G010430 Rw1G010440 Rw2G003210 Rw2G003220 Rw4G010970 Rw5G048520 Rw6G013320 Rw6G013470 Rw6G014940 Rw6G016570 Rw6G016590 Rw6G016600 Rw6G016610 Rw6G016620 Rw6G035450 Rw7G027760 Rw7G030460

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1427
AasI GACNNNNNNGTC 2 cut(s) 64, 1703
AatII GACGTC 1 cut(s) 1475
AbsI CCTCGAGG 1 cut(s) 1911
Acc16I TGCGCA 2 cut(s) 351, 1194
Acc36I ACCTGC 1 cut(s) 457
AccB1I GGYRCC 2 cut(s) 1095, 1131
AccB7I CCANNNNNTGG 1 cut(s) 1800
AccI GTMKAC 3 cut(s) 634, 660, 1734
AccII CGCG 3 cut(s) 10, 408, 813
AclWI GGATC 2 cut(s) 25, 90
AcuI CTGAAG 2 cut(s) 893, 1221
AcvI CACGTG 1 cut(s) 229
AcyI GRCGYC 1 cut(s) 1472
AdeI CACNNNGTG 1 cut(s) 1800
AfaI GTAC 4 cut(s) 316, 641, 656, 1892
AfiI CCNNNNNNNGG 6 cut(s) 1066, 1329, 1501, 1800, 1969, 2033
AflIII ACRYGT 1 cut(s) 2040
AgeI ACCGGT 1 cut(s) 1092
AgsI TTSAA 4 cut(s) 28, 436, 1523, 1788
AjiI CACGTC 1 cut(s) 389
AjnI CCWGG 1 cut(s) 1550
AluBI AGCT 8 cut(s) 271, 355, 757, 907, 970, 1570, 1660, 1876
AluI AGCT 8 cut(s) 271, 355, 757, 907, 970, 1570, 1660, 1876
Alw21I GWGCWC 2 cut(s) 8, 255
Alw26I GTCTC 4 cut(s) 199, 521, 1613, 1979
AlwI GGATC 2 cut(s) 25, 90
Ama87I CYCGRG 1 cut(s) 1911
AoxI GGCC 4 cut(s) 279, 1056, 1593, 1662
ApeKI GCWGC 6 cut(s) 352, 1232, 1431, 1939, 1942, 1997
ArsI GACNNNNNNTTYG 4 cut(s) 290, 322, 1826, 1858
AseI ATTAAT 1 cut(s) 216
AsiGI ACCGGT 1 cut(s) 1092
AspLEI GCGC 5 cut(s) 352, 813, 1195, 1262, 1550
AspS9I GGNCC 7 cut(s) 194, 279, 819, 1057, 1409, 1594, 1663
AsuC2I CCSGG 2 cut(s) 1257, 2034
AsuHPI GGTGA 3 cut(s) 623, 748, 1945
AsuII TTCGAA 1 cut(s) 120
AvaI CYCGRG 1 cut(s) 1911
AvaII GGWCC 3 cut(s) 194, 819, 1409
BaeGI GKGCMC 1 cut(s) 1716
BaeI ACNNNNGTAYC 2 cut(s) 90, 123
BanI GGYRCC 2 cut(s) 1095, 1131
BauI CACGAG 1 cut(s) 884
BbrPI CACGTG 1 cut(s) 229
BbsI GAAGAC 4 cut(s) 375, 1280, 1475, 1999
Bbv12I GWGCWC 2 cut(s) 8, 255
BbvCI CCTCAGC 1 cut(s) 1755
BbvI GCAGC 6 cut(s) 364, 1219, 1443, 1926, 1929, 1984
BccI CCATC 7 cut(s) 907, 1042, 1250, 1332, 1641, 1646, 1836
BceAI ACGGC 1 cut(s) 572
BciT130I CCWGG 1 cut(s) 1552
BciVI GTATCC 1 cut(s) 118
BcnI CCSGG 2 cut(s) 1257, 2034
BcoDI GTCTC 4 cut(s) 199, 521, 1613, 1979
BfaI CTAG 4 cut(s) 767, 971, 1227, 1797
BfmI CTRYAG 1 cut(s) 1185
BfuAI ACCTGC 1 cut(s) 457
BfuI GTATCC 1 cut(s) 118
BglII AGATCT 1 cut(s) 438
BisI GCNGC 8 cut(s) 11, 353, 1081, 1233, 1432, 1940, 1943, 1998
BlpI GCTNAGC 1 cut(s) 356
BlsI GCNGC 8 cut(s) 12, 354, 1082, 1234, 1433, 1941, 1944, 1999
Bme1390I CCNGG 3 cut(s) 1257, 1552, 2034
Bme18I GGWCC 3 cut(s) 194, 819, 1409
BmeT110I CYCGRG 1 cut(s) 1911
BmgBI CACGTC 1 cut(s) 389
BmgT120I GGNCC 7 cut(s) 194, 279, 819, 1057, 1409, 1594, 1663
BmiI GGNNCC 5 cut(s) 280, 853, 1091, 1097, 1133
BmrFI CCNGG 3 cut(s) 1257, 1552, 2034
BmrI ACTGGG 4 cut(s) 562, 1054, 1510, 1660
BmsI GCATC 6 cut(s) 566, 574, 981, 1180, 1410, 2024
BmuI ACTGGG 4 cut(s) 562, 1054, 1510, 1660
BpiI GAAGAC 4 cut(s) 375, 1280, 1475, 1999
BplI GAGNNNNNCTC 1 cut(s) 38
BpmI CTGGAG 2 cut(s) 1231, 1661
Bpu10I CCTNAGC 1 cut(s) 1755
Bpu1102I GCTNAGC 1 cut(s) 356
Bpu14I TTCGAA 1 cut(s) 120
BpuEI CTTGAG 4 cut(s) 545, 1289, 1931, 2012
BpuMI CCSGG 2 cut(s) 1257, 2034
BsaAI YACGTR 2 cut(s) 229, 658
BsaHI GRCGYC 1 cut(s) 1472
BsaI GGTCTC 1 cut(s) 1613
BsaJI CCNNGG 3 cut(s) 1551, 2001, 2032
BsaWI WCCGGW 2 cut(s) 110, 1092
Bsc4I CCNNNNNNNGG 6 cut(s) 1066, 1329, 1501, 1800, 1969, 2033
Bse118I RCCGGY 2 cut(s) 1066, 1092
Bse3DI GCAATG 1 cut(s) 292
BseBI CCWGG 1 cut(s) 1552
BseDI CCNNGG 3 cut(s) 1551, 2001, 2032
BseGI GGATG 6 cut(s) 430, 589, 736, 747, 778, 1657
BseLI CCNNNNNNNGG 6 cut(s) 1066, 1329, 1501, 1800, 1969, 2033
BseMI GCAATG 1 cut(s) 292
BseMII CTCAG 3 cut(s) 268, 347, 1746
BseRI GAGGAG 3 cut(s) 39, 826, 1631
BseSI GKGCMC 1 cut(s) 1716
BseXI GCAGC 6 cut(s) 364, 1219, 1443, 1926, 1929, 1984
BsgI GTGCAG 1 cut(s) 1133
Bsh1236I CGCG 3 cut(s) 10, 408, 813
Bsh1285I CGRYCG 2 cut(s) 313, 1707
BshFI GGCC 4 cut(s) 281, 1058, 1595, 1664
BshNI GGYRCC 2 cut(s) 1095, 1131
BshTI ACCGGT 1 cut(s) 1092
BsiEI CGRYCG 2 cut(s) 313, 1707
BsiHKAI GWGCWC 2 cut(s) 8, 255
BsiHKCI CYCGRG 1 cut(s) 1911
BsiSI CCGG 5 cut(s) 111, 1067, 1093, 1256, 2034
BslFI GGGAC 5 cut(s) 170, 235, 490, 1386, 1778
BslI CCNNNNNNNGG 6 cut(s) 1066, 1329, 1501, 1800, 1969, 2033
BsmAI GTCTC 4 cut(s) 199, 521, 1613, 1979
BsmBI CGTCTC 1 cut(s) 1979
BsmFI GGGAC 5 cut(s) 170, 235, 490, 1386, 1778
BsnI GGCC 4 cut(s) 281, 1058, 1595, 1664
Bso31I GGTCTC 1 cut(s) 1613
BsoBI CYCGRG 1 cut(s) 1911
Bsp119I TTCGAA 1 cut(s) 120
Bsp1286I GDGCHC 3 cut(s) 8, 255, 1716
Bsp143I GATC 5 cut(s) 17, 82, 427, 438, 1283
Bsp1720I GCTNAGC 1 cut(s) 356
BspANI GGCC 4 cut(s) 281, 1058, 1595, 1664
BspCNI CTCAG 3 cut(s) 267, 348, 1747
BspFNI CGCG 3 cut(s) 10, 408, 813
BspLI GGNNCC 5 cut(s) 280, 853, 1091, 1097, 1133
BspMI ACCTGC 1 cut(s) 457
BspPI GGATC 2 cut(s) 25, 90
BspQI GCTCTTC 1 cut(s) 987
BspT104I TTCGAA 1 cut(s) 120
BspT107I GGYRCC 2 cut(s) 1095, 1131
BspTNI GGTCTC 1 cut(s) 1613
BsrDI GCAATG 1 cut(s) 292
BsrFI RCCGGY 2 cut(s) 1066, 1092
BssAI RCCGGY 2 cut(s) 1066, 1092
BssECI CCNNGG 3 cut(s) 1551, 2001, 2032
BssMI GATC 5 cut(s) 17, 82, 427, 438, 1283
BssNI GRCGYC 1 cut(s) 1472
BssSI CACGAG 1 cut(s) 884
BssT1I CCWWGG 1 cut(s) 2001
Bst2BI CACGAG 1 cut(s) 884
Bst2UI CCWGG 1 cut(s) 1552
Bst6I CTCTTC 4 cut(s) 29, 411, 525, 987
BstACI GRCGYC 1 cut(s) 1472
BstBAI YACGTR 2 cut(s) 229, 658
BstBI TTCGAA 1 cut(s) 120
BstC8I GCNNGC 3 cut(s) 8, 755, 1662
BstDEI CTNAG 5 cut(s) 254, 356, 758, 944, 1755
BstF5I GGATG 6 cut(s) 430, 589, 736, 747, 778, 1657
BstFNI CGCG 3 cut(s) 10, 408, 813
BstHHI GCGC 5 cut(s) 352, 813, 1195, 1262, 1550
BstKTI GATC 5 cut(s) 20, 85, 430, 441, 1286
BstMAI GTCTC 4 cut(s) 199, 521, 1613, 1979
BstMBI GATC 5 cut(s) 17, 82, 427, 438, 1283
BstMCI CGRYCG 2 cut(s) 313, 1707
BstMWI GCNNNNNNNGC 5 cut(s) 95, 1238, 1257, 1319, 1420
BstNI CCWGG 1 cut(s) 1552
BstNSI RCATGY 2 cut(s) 534, 2044
BstSCI CCNGG 3 cut(s) 1255, 1550, 2032
BstSFI CTRYAG 1 cut(s) 1185
BstSLI GKGCMC 1 cut(s) 1716
BstSNI TACGTA 1 cut(s) 658
BstUI CGCG 3 cut(s) 10, 408, 813
BstV1I GCAGC 6 cut(s) 364, 1219, 1443, 1926, 1929, 1984
BstV2I GAAGAC 4 cut(s) 375, 1280, 1475, 1999
BstX2I RGATCY 3 cut(s) 17, 82, 438
BstYI RGATCY 3 cut(s) 17, 82, 438
BsuI GTATCC 1 cut(s) 118
BsuRI GGCC 4 cut(s) 281, 1058, 1595, 1664
BtgZI GCGATG 1 cut(s) 1942
BtrI CACGTC 1 cut(s) 389
BtsCI GGATG 6 cut(s) 430, 589, 736, 747, 778, 1657
BtsI GCAGTG 1 cut(s) 1099
BtsIMutI CAGTG 9 cut(s) 102, 246, 458, 1099, 1116, 1589, 1673, 1714, 1774
BveI ACCTGC 1 cut(s) 457
Cac8I GCNNGC 3 cut(s) 8, 755, 1662
CfoI GCGC 5 cut(s) 352, 813, 1195, 1262, 1550
Cfr10I RCCGGY 2 cut(s) 1066, 1092
Cfr13I GGNCC 7 cut(s) 194, 279, 819, 1057, 1409, 1594, 1663
CpoI CGGWCCG 1 cut(s) 1409
CseI GACGC 1 cut(s) 1996
Csp6I GTAC 4 cut(s) 315, 640, 655, 1891
CspAI ACCGGT 1 cut(s) 1092
CspI CGGWCCG 1 cut(s) 1409
CviAII CATG 7 cut(s) 260, 531, 1462, 1540, 1738, 1966, 2041
CviQI GTAC 4 cut(s) 315, 640, 655, 1891
DdeI CTNAG 5 cut(s) 254, 356, 758, 944, 1755
DpnI GATC 5 cut(s) 19, 84, 429, 440, 1285
DpnII GATC 5 cut(s) 17, 82, 427, 438, 1283
DraIII CACNNNGTG 1 cut(s) 1800
DrdI GACNNNNNNGTC 2 cut(s) 64, 1703
DseDI GACNNNNNNGTC 2 cut(s) 64, 1703
Eam1104I CTCTTC 4 cut(s) 29, 411, 525, 987
EarI CTCTTC 4 cut(s) 29, 411, 525, 987
EciI GGCGGA 1 cut(s) 437
Eco105I TACGTA 1 cut(s) 658
Eco130I CCWWGG 1 cut(s) 2001
Eco31I GGTCTC 1 cut(s) 1613
Eco32I GATATC 1 cut(s) 78
Eco47I GGWCC 3 cut(s) 194, 819, 1409
Eco57I CTGAAG 2 cut(s) 893, 1221
Eco72I CACGTG 1 cut(s) 229
Eco88I CYCGRG 1 cut(s) 1911
EcoO109I RGGNCCY 2 cut(s) 279, 819
EcoRII CCWGG 1 cut(s) 1550
EcoRV GATATC 1 cut(s) 78
EcoT14I CCWWGG 1 cut(s) 2001
ErhI CCWWGG 1 cut(s) 2001
Esp3I CGTCTC 1 cut(s) 1979
FaeI CATG 7 cut(s) 263, 534, 1465, 1543, 1741, 1969, 2044
FalI AAGNNNNNCTT 2 cut(s) 1667, 1699
FaqI GGGAC 5 cut(s) 170, 235, 490, 1386, 1778
FatI CATG 7 cut(s) 259, 530, 1461, 1539, 1737, 1965, 2040
FauI CCCGC 1 cut(s) 620
FauNDI CATATG 1 cut(s) 1380
FblI GTMKAC 3 cut(s) 634, 660, 1734
Fnu4HI GCNGC 8 cut(s) 11, 353, 1081, 1233, 1432, 1940, 1943, 1998
FokI GGATG 6 cut(s) 437, 596, 734, 743, 785, 1664
Fsp4HI GCNGC 8 cut(s) 11, 353, 1081, 1233, 1432, 1940, 1943, 1998
FspBI CTAG 4 cut(s) 767, 971, 1227, 1797
FspI TGCGCA 2 cut(s) 351, 1194
GlaI GCGC 5 cut(s) 351, 812, 1194, 1261, 1549
GluI GCNGC 8 cut(s) 11, 353, 1081, 1233, 1432, 1940, 1943, 1998
GsuI CTGGAG 2 cut(s) 1231, 1661
HaeIII GGCC 4 cut(s) 281, 1058, 1595, 1664
HapII CCGG 5 cut(s) 111, 1067, 1093, 1256, 2034
HgaI GACGC 1 cut(s) 1996
HhaI GCGC 5 cut(s) 352, 813, 1195, 1262, 1550
Hin1I GRCGYC 1 cut(s) 1472
Hin1II CATG 7 cut(s) 263, 534, 1465, 1543, 1741, 1969, 2044
Hin6I GCGC 5 cut(s) 350, 811, 1193, 1260, 1548
HinP1I GCGC 5 cut(s) 350, 811, 1193, 1260, 1548
HincII GTYRAC 1 cut(s) 499
HindII GTYRAC 1 cut(s) 499
HindIII AAGCTT 2 cut(s) 755, 905
HpaII CCGG 5 cut(s) 111, 1067, 1093, 1256, 2034
HphI GGTGA 3 cut(s) 623, 748, 1945
Hpy188I TCNGA 7 cut(s) 82, 257, 393, 542, 799, 841, 912
Hpy188III TCNNGA 6 cut(s) 436, 524, 884, 1268, 1287, 1832
Hpy99I CGWCG 2 cut(s) 1439, 1700
HpyAV CCTTC 7 cut(s) 121, 172, 388, 1133, 1500, 1523, 1963
HpyCH4IV ACGT 7 cut(s) 228, 388, 412, 657, 1150, 1458, 1472
HpyCH4V TGCA 3 cut(s) 778, 1114, 2015
HpyF10VI GCNNNNNNNGC 5 cut(s) 95, 1238, 1257, 1319, 1420
HpyF3I CTNAG 5 cut(s) 254, 356, 758, 944, 1755
HpySE526I ACGT 7 cut(s) 228, 388, 412, 657, 1150, 1458, 1472
Hsp92I GRCGYC 1 cut(s) 1472
Hsp92II CATG 7 cut(s) 263, 534, 1465, 1543, 1741, 1969, 2044
HspAI GCGC 5 cut(s) 350, 811, 1193, 1260, 1548
Kzo9I GATC 5 cut(s) 17, 82, 427, 438, 1283
LguI GCTCTTC 1 cut(s) 987
LmnI GCTCC 2 cut(s) 851, 1198
Lsp1109I GCAGC 6 cut(s) 364, 1219, 1443, 1926, 1929, 1984
LweI GCATC 6 cut(s) 566, 574, 981, 1180, 1410, 2024
MaeI CTAG 4 cut(s) 767, 971, 1227, 1797
MaeII ACGT 7 cut(s) 228, 388, 412, 657, 1150, 1458, 1472
MaeIII GTNAC 5 cut(s) 133, 139, 244, 1222, 2036
MalI GATC 5 cut(s) 19, 84, 429, 440, 1285
MboI GATC 5 cut(s) 17, 82, 427, 438, 1283
MflI RGATCY 3 cut(s) 17, 82, 438
MhlI GDGCHC 3 cut(s) 8, 255, 1716
MluCI AATT 3 cut(s) 829, 1211, 1453
MlyI GAGTC 6 cut(s) 74, 152, 217, 356, 494, 1111
MmeI TCCRAC 2 cut(s) 864, 1839
MseI TTAA 5 cut(s) 216, 902, 1025, 1161, 1448
MspA1I CMGCKG 2 cut(s) 355, 1414
MspI CCGG 5 cut(s) 111, 1067, 1093, 1256, 2034
MspR9I CCNGG 3 cut(s) 1257, 1552, 2034
MvaI CCWGG 1 cut(s) 1552
MvnI CGCG 3 cut(s) 10, 408, 813
MwoI GCNNNNNNNGC 5 cut(s) 95, 1238, 1257, 1319, 1420
NciI CCSGG 2 cut(s) 1257, 2034
NdeI CATATG 1 cut(s) 1380
NdeII GATC 5 cut(s) 17, 82, 427, 438, 1283
NlaIII CATG 7 cut(s) 263, 534, 1465, 1543, 1741, 1969, 2044
NlaIV GGNNCC 5 cut(s) 280, 853, 1091, 1097, 1133
NmeAIII GCCGAG 1 cut(s) 1160
NmuCI GTSAC 2 cut(s) 133, 244
NsbI TGCGCA 2 cut(s) 351, 1194
NspI RCATGY 2 cut(s) 534, 2044
NspV TTCGAA 1 cut(s) 120
PaeR7I CTCGAG 1 cut(s) 1911
PciI ACATGT 1 cut(s) 2040
PciSI GCTCTTC 1 cut(s) 987
PcsI WCGNNNNNNNCGW 1 cut(s) 696
PfeI GAWTC 4 cut(s) 376, 940, 964, 1720
PflMI CCANNNNNTGG 1 cut(s) 1800
PinAI ACCGGT 1 cut(s) 1092
PkrI GCNGC 8 cut(s) 12, 354, 1082, 1234, 1433, 1941, 1944, 1999
PleI GAGTC 6 cut(s) 73, 152, 217, 356, 494, 1111
PmaCI CACGTG 1 cut(s) 229
PmlI CACGTG 1 cut(s) 229
PpsI GAGTC 6 cut(s) 73, 152, 217, 356, 494, 1111
Ppu21I YACGTR 2 cut(s) 229, 658
PpuMI RGGWCCY 1 cut(s) 819
PscI ACATGT 1 cut(s) 2040
PshBI ATTAAT 1 cut(s) 216
PsiI TTATAA 1 cut(s) 1427
Psp5II RGGWCCY 1 cut(s) 819
Psp6I CCWGG 1 cut(s) 1550
PspCI CACGTG 1 cut(s) 229
PspGI CCWGG 1 cut(s) 1550
PspN4I GGNNCC 5 cut(s) 280, 853, 1091, 1097, 1133
PspPI GGNCC 7 cut(s) 194, 279, 819, 1057, 1409, 1594, 1663
PspPPI RGGWCCY 1 cut(s) 819
PspXI VCTCGAGB 1 cut(s) 1911
PsuI RGATCY 3 cut(s) 17, 82, 438
PvuII CAGCTG 1 cut(s) 355
RsaI GTAC 4 cut(s) 316, 641, 656, 1892
RsaNI GTAC 4 cut(s) 315, 640, 655, 1891
Rsr2I CGGWCCG 1 cut(s) 1409
RsrII CGGWCCG 1 cut(s) 1409
SapI GCTCTTC 1 cut(s) 987
SaqAI TTAA 5 cut(s) 216, 902, 1025, 1161, 1448
SatI GCNGC 8 cut(s) 11, 353, 1081, 1233, 1432, 1940, 1943, 1998
Sau3AI GATC 5 cut(s) 17, 82, 427, 438, 1283
Sau96I GGNCC 7 cut(s) 194, 279, 819, 1057, 1409, 1594, 1663
SchI GAGTC 6 cut(s) 74, 152, 217, 356, 494, 1111
ScrFI CCNGG 3 cut(s) 1257, 1552, 2034
SduI GDGCHC 3 cut(s) 8, 255, 1716
SfaNI GCATC 6 cut(s) 566, 574, 981, 1180, 1410, 2024
SfcI CTRYAG 1 cut(s) 1185
Sfr274I CTCGAG 1 cut(s) 1911
SfuI TTCGAA 1 cut(s) 120
SinI GGWCC 3 cut(s) 194, 819, 1409
SlaI CTCGAG 1 cut(s) 1911
SmlI CTYRAG 5 cut(s) 524, 1268, 1911, 1946, 1991
SmoI CTYRAG 5 cut(s) 524, 1268, 1911, 1946, 1991
SnaBI TACGTA 1 cut(s) 658
Sse9I AATT 3 cut(s) 829, 1211, 1453
SspI AATATT 2 cut(s) 1519, 1807
SspMI CTAG 4 cut(s) 767, 971, 1227, 1797
StyD4I CCNGG 3 cut(s) 1255, 1550, 2032
StyI CCWWGG 1 cut(s) 2001
TaiI ACGT 7 cut(s) 231, 391, 415, 660, 1153, 1461, 1475
TaqII GACCGA 2 cut(s) 299, 1693
TasI AATT 3 cut(s) 829, 1211, 1453
TatI WGTACW 2 cut(s) 639, 1890
TauI GCSGC 2 cut(s) 13, 1083
TfiI GAWTC 4 cut(s) 376, 940, 964, 1720
Tru1I TTAA 5 cut(s) 216, 902, 1025, 1161, 1448
Tru9I TTAA 5 cut(s) 216, 902, 1025, 1161, 1448
TscAI CASTG 9 cut(s) 109, 253, 465, 1106, 1116, 1596, 1673, 1721, 1774
TseFI GTSAC 2 cut(s) 133, 244
TseI GCWGC 6 cut(s) 352, 1232, 1431, 1939, 1942, 1997
Tsp45I GTSAC 2 cut(s) 133, 244
TspDTI ATGAA 4 cut(s) 1397, 1528, 1938, 1982
TspGWI ACGGA 3 cut(s) 864, 1422, 1541
TspRI CASTG 9 cut(s) 109, 253, 465, 1106, 1116, 1596, 1673, 1721, 1774
Van91I CCANNNNNTGG 1 cut(s) 1800
VpaK11BI GGWCC 3 cut(s) 194, 819, 1409
VspI ATTAAT 1 cut(s) 216
XceI RCATGY 2 cut(s) 534, 2044
XhoI CTCGAG 1 cut(s) 1911
XmiI GTMKAC 3 cut(s) 634, 660, 1734
XspI CTAG 4 cut(s) 767, 971, 1227, 1797
ZraI GACGTC 1 cut(s) 1473
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.