Rh2AG642300

protein desumoylation

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
OG0000124
Physical Location & Seq
Reverse (-)
86493038 .. 86495094
2057 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG642300.1

Sequence Viewer

Length: 1266 bp
ATGCATATCCATATAAACCTGCAATTATGTGATGAGTTTGTGTCAACAGTTCACAATAATGAATGTGCAAACTTATGTTTTGGTGTTCTCCGGTGCCCCATTTTGAAGGTCTCACAATCTGATGTCGGCGAGGCTGTGCGGGCTGTGTCAGCCATCTCAAGCAGCCCGGCTGAACCCCCATCAATGCCAATCAGAAGGTCTAAGGCAGTAGGTGCCGGGGCATCCAGGGCCATCGCATCTCCATATGCACGTGCCCTTTCCACATACGCAGTTTCACAAAGCGAGAGAGTGGAGTCCTGCCACTGTGCTGAATATGCGGCGGGTCCTTACCTTCTACAGAAGGCCGTCTGCAATGAGGACCTCCTATTCATCAACTACATATTCATCGGGGGTAGGAAATGCACAGTTGAGGAAGGAAGAACAATTGTTGCAGCATGCGGGAATAACAGGGCTCTGCTGTACCGCCATGAAATCTCCTGCTTGGGACCTAACAAATTTGTGACCACTTTTGAGAAGGCAAACACGTATGACGCAGGGGAGTCGTCATTTCAGAATTGGGTTGAGCACACCCGCACACTCTGCAATCTGGACTGGGTCAATGGTCTGTTGGAGAAGTGCAAGAGGAGTTTCTTGCCGATGCACGATGAAAAGAATGGGGGACATTGGTTCTTGATGGTTGTTGATACGCATAACAAGGTTGCTGAGATTTGGGACAGTCTCCCTAGTTTCTTTGGCGACAGTCGGAGATGGAAAATTGCAATAAGAATTCTGCGCCATCTTGACCATTGCTTCTACTTTGAGAAGATGAGGCTGAAAGGTAGCACTGACTTTGGGATGTTCAATCATGTTGTTCCTGACAATGTTCCAACACAGAAAAATGGAGTTGATTGTGGCGTCTTCGTCATCCAGAACATGATGCACTTTAAGACTAAGTGGAATGAAGGGGCCACCTCACATAAGCTTCGATGCAACGTCCTGCTTCGCTGTCTCAAGTCCCCCGCAAATGAGAGGGCAAAATTTACACTTAGGGAGGCAAGAGGATTTGCTGCTACTGATGGCTTGGGCAGAAGTTTAAAGGATCCAAATGACATATTGGGATCCGCTGGATGGGATGCCATTGATTTGGCTGAGCTCGAAGAGGTGGGTGCTGGGTTGGGTGTTGGTGAAGATGGGTTACAGAGCTTGGCAGGAGGGAAGGATTATGTGACGTTCAAGGGGAATAACGATCTCACCAACGATTTTCCCACTGAACTCTTCCATCAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_C48

Protein Analysis

421

Amino Acids

46.76

Weight (kDa)

6.73

Isoelectric Point (pI)

56.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_C48 PF02902 182 - 308 7.3e-13 Ulp1 protease family, C-terminal catalytic domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000124)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g10992 FvH4_2g25150 FvH4_2g27910 FvH4_2g27931 FvH4_4g09443 FvH4_4g09490 FvH4_4g15990 FvH4_4g15991 FvH4_6g07180 FvH4_6g40320 FvH4_7g10222 FvH4_7g10251
rosa_chinensis RchiOBHm_Chr2g0155611
rosa_laevigata RLG00000009253 RLG00000009254 RLG00000011848 RLG00000017301 RLG00000017302 RLG00000034909
rosa_multiflora Rmu_co8063658.1_g000001 Rmu_co8240443.1_g000001 Rmu_co8264451.1_g000001 Rmu_co8381937.1_g000001 Rmu_co8419903.1_g000001 Rmu_co8513405.1_g000002 Rmu_co8522915.1_g000001 Rmu_co8522915.1_g000004 Rmu_sc0000279.1_g000024 Rmu_sc0000279.1_g000048 Rmu_sc0000642.1_g000017 Rmu_sc0002045.1_g000015 Rmu_sc0002045.1_g000018 Rmu_sc0002045.1_g000023 Rmu_sc0002045.1_g000028 Rmu_sc0003047.1_g000008 Rmu_sc0003179.1_g000019 Rmu_sc0003179.1_g000020 Rmu_sc0003179.1_g000022 Rmu_sc0003179.1_g000023 Rmu_sc0003422.1_g000011 Rmu_sc0004999.1_g000014 Rmu_sc0005712.1_g000018 Rmu_sc0005712.1_g000023 Rmu_sc0006198.1_g000019 Rmu_sc0006373.1_g000005 Rmu_sc0006514.1_g000028 Rmu_sc0006514.1_g000031 Rmu_sc0007367.1_g000010 Rmu_sc0011475.1_g000002 Rmu_sc0025304.1_g000001 Rmu_ssc0000161.1_g000030 Rmu_ssc0000161.1_g000032 Rmu_ssc0000387.1_g000018
rosa_roxburghii Rroxscaffold_1G00031090 Rroxscaffold_1G00032770 Rroxscaffold_1G00068950 Rroxscaffold_1G00069000 Rroxscaffold_1G00069010 Rroxscaffold_2G00129060 Rroxscaffold_2G00129100 Rroxscaffold_4G00309310 Rroxscaffold_4G00309320 Rroxscaffold_5G00350620 Rroxscaffold_5G00350630 Rroxscaffold_7G00162650 Rroxscaffold_7G00162660 Rroxscaffold_7G00162710
rosa_rugosa Rorug02G0564700 Rorug02G0564700 Rorug03G0343100 Rorug04G0189700 Rorug05G0102800 Rorug05G0102900 Rorug05G0103000 Rorug05G0106500 Rorug05G0106600 Rorug05G0106700 Rorug05G0252800 Rorug07G0182100 Rorug07G0283500 Rorug07G0283600
rosa_samantha Rh1AG004000 Rh1AG004100 Rh1AG004200 Rh1AG004400 Rh1AG004500 Rh1AG004600 Rh1AG004800 Rh1AG004900 Rh1AG005300 Rh1AG007000 Rh1AG115000 Rh1CG049400 Rh1CG055400 Rh1CG111000 Rh1DG053600 Rh1DG053700 Rh1DG059300 Rh1DG119700 Rh1DG177100 Rh1DG177200 Rh2AG353800 Rh2AG354000 Rh2AG354100 Rh2AG354300 Rh2AG354400 Rh2AG354500 Rh2AG354600 Rh2AG354700 Rh2AG642300 Rh2AG642400 Rh2AG642500 Rh2BG336500 Rh2BG336600 Rh2BG336700 Rh2BG336800 Rh2BG336900 Rh2CG299900 Rh2CG300000 Rh2CG300100 Rh2DG337000 Rh2DG337100 Rh3AG246600 Rh3BG121900 Rh3BG122300 Rh3BG122600 Rh3BG122700 Rh3DG304800 Rh3DG304900 Rh4AG148800 Rh4AG249000 Rh4AG249100 Rh4AG249200 Rh4BG182700 Rh4BG182800 Rh4BG182900 Rh4BG254400 Rh4BG254500 Rh4BG254600 Rh4CG155500 Rh4CG155700 Rh4DG057900 Rh4DG058000 Rh4DG058100 Rh4DG058200 Rh4DG129100 Rh5AG364500 Rh5AG364600 Rh5AG364800 Rh5AG365300 Rh5CG363700 Rh5CG497600 Rh5DG239500 Rh5DG239600 Rh6AG173500 Rh6AG175400 Rh6BG075900 Rh6BG076300 Rh6BG076400 Rh6BG076500 Rh6BG076600 Rh6CG151000 Rh6CG151200 Rh6CG151300 Rh6CG151400 Rh6CG205200 Rh6CG205300 Rh6CG419700 Rh6CG419900 Rh6CG420100 Rh6DG498700 Rh6DG498800 Rh7AG329000 Rh7AG329100 Rh7AG329300 Rh7AG329400 Rh7AG353000 Rh7AG353100 Rh7AG353300 Rh7AG353400 Rh7AG353500 Rh7CG346400 Rh7CG346500 Rh7CG346700 Rh7CG370800 Rh7CG370900 Rh7CG371000 Rh7CG371100 Rh7DG325000 Rh7DG325100 Rh7DG325200 Rh7DG325300 Rh7DG353100 Rh7DG353200 Rh7DG353300 Rh7DG363500 Rh7DG364000
rosa_wichuraiana Rw0G002290 Rw0G012780 Rw1G000260 Rw1G000270 Rw1G010400 Rw1G010410 Rw1G010420 Rw1G010430 Rw1G010440 Rw2G003210 Rw2G003220 Rw4G010970 Rw5G048520 Rw6G013320 Rw6G013470 Rw6G014940 Rw6G016570 Rw6G016590 Rw6G016600 Rw6G016610 Rw6G016620 Rw6G035450 Rw7G027760 Rw7G030460

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 27
AccB1I GGYRCC 2 cut(s) 93, 212
AciI CCGC 8 cut(s) 139, 317, 320, 438, 463, 571, 999, 1101
AclWI GGATC 4 cut(s) 1073, 1086, 1092, 1105
AcsI RAATTY 3 cut(s) 494, 765, 1016
AcvI CACGTG 1 cut(s) 251
AcyI GRCGYC 1 cut(s) 894
AfaI GTAC 1 cut(s) 461
AfiI CCNNNNNNNGG 1 cut(s) 1107
AflIII ACRYGT 1 cut(s) 522
AgsI TTSAA 3 cut(s) 106, 841, 1213
AjnI CCWGG 1 cut(s) 224
AluBI AGCT 3 cut(s) 961, 1132, 1182
AluI AGCT 3 cut(s) 961, 1132, 1182
Alw21I GWGCWC 2 cut(s) 567, 1134
Alw26I GTCTC 3 cut(s) 115, 722, 992
AlwI GGATC 4 cut(s) 1073, 1086, 1092, 1105
AoxI GGCC 3 cut(s) 228, 342, 945
ApeKI GCWGC 3 cut(s) 162, 431, 1046
ApoI RAATTY 3 cut(s) 494, 765, 1016
AspLEI GCGC 1 cut(s) 774
AspS9I GGNCC 5 cut(s) 228, 323, 358, 485, 945
AsuC2I CCSGG 2 cut(s) 167, 217
AsuHPI GGTGA 2 cut(s) 1175, 1222
AvaII GGWCC 3 cut(s) 323, 358, 485
BaeGI GKGCMC 2 cut(s) 98, 256
BamHI GGATCC 2 cut(s) 1078, 1097
BanI GGYRCC 2 cut(s) 93, 212
BanII GRGCYC 2 cut(s) 454, 1134
BarI GAAGNNNNNNTAC 2 cut(s) 1158, 1190
BbrPI CACGTG 1 cut(s) 251
BbsI GAAGAC 1 cut(s) 889
Bbv12I GWGCWC 2 cut(s) 567, 1134
BbvI GCAGC 3 cut(s) 174, 443, 1033
BccI CCATC 9 cut(s) 161, 187, 239, 667, 741, 783, 1049, 1101, 1163
BceAI ACGGC 1 cut(s) 329
BcgI CGANNNNNNTGC 2 cut(s) 522, 556
BciT130I CCWGG 1 cut(s) 226
BcnI CCSGG 2 cut(s) 167, 217
BcoDI GTCTC 3 cut(s) 115, 722, 992
BfaI CTAG 1 cut(s) 723
BfmI CTRYAG 1 cut(s) 335
BfuAI ACCTGC 1 cut(s) 27
BisI GCNGC 4 cut(s) 163, 318, 432, 1047
BlpI GCTNAGC 1 cut(s) 1128
BlsI GCNGC 4 cut(s) 164, 319, 433, 1048
Bme1390I CCNGG 3 cut(s) 167, 217, 226
Bme18I GGWCC 3 cut(s) 323, 358, 485
BmgT120I GGNCC 5 cut(s) 228, 323, 358, 485, 945
BmiI GGNNCC 7 cut(s) 95, 214, 324, 486, 946, 1080, 1099
BmrFI CCNGG 3 cut(s) 167, 217, 226
BmrI ACTGGG 1 cut(s) 601
BmsI GCATC 6 cut(s) 230, 245, 627, 906, 956, 1102
BmuI ACTGGG 1 cut(s) 601
BpiI GAAGAC 1 cut(s) 889
Bpu1102I GCTNAGC 1 cut(s) 1128
BpuEI CTTGAG 2 cut(s) 142, 974
BpuMI CCSGG 2 cut(s) 167, 217
BsaAI YACGTR 2 cut(s) 251, 525
BsaHI GRCGYC 1 cut(s) 894
BsaI GGTCTC 1 cut(s) 115
BsaJI CCNNGG 2 cut(s) 216, 225
BsaWI WCCGGW 1 cut(s) 90
Bsc4I CCNNNNNNNGG 1 cut(s) 1107
Bse1I ACTGG 1 cut(s) 596
Bse3DI GCAATG 2 cut(s) 358, 784
BseBI CCWGG 1 cut(s) 226
BseDI CCNNGG 2 cut(s) 216, 225
BseGI GGATG 5 cut(s) 221, 840, 903, 1112, 1117
BseLI CCNNNNNNNGG 1 cut(s) 1107
BseMI GCAATG 2 cut(s) 358, 784
BseMII CTCAG 2 cut(s) 693, 1119
BseNI ACTGG 1 cut(s) 596
BseRI GAGGAG 1 cut(s) 637
BseSI GKGCMC 2 cut(s) 98, 256
BseXI GCAGC 3 cut(s) 174, 443, 1033
BseYI CCCAGC 1 cut(s) 1148
BshFI GGCC 3 cut(s) 230, 344, 947
BshNI GGYRCC 2 cut(s) 93, 212
BsiHKAI GWGCWC 2 cut(s) 567, 1134
BsiSI CCGG 3 cut(s) 91, 167, 216
BslFI GGGAC 4 cut(s) 498, 672, 725, 979
BslI CCNNNNNNNGG 1 cut(s) 1107
BsmAI GTCTC 3 cut(s) 115, 722, 992
BsmFI GGGAC 4 cut(s) 498, 672, 725, 979
BsnI GGCC 3 cut(s) 230, 344, 947
Bso31I GGTCTC 1 cut(s) 115
Bsp1286I GDGCHC 5 cut(s) 98, 256, 454, 567, 1134
Bsp143I GATC 3 cut(s) 1078, 1097, 1225
Bsp1720I GCTNAGC 1 cut(s) 1128
BspACI CCGC 8 cut(s) 139, 317, 320, 438, 463, 571, 999, 1101
BspANI GGCC 3 cut(s) 230, 344, 947
BspCNI CTCAG 2 cut(s) 694, 1120
BspLI GGNNCC 7 cut(s) 95, 214, 324, 486, 946, 1080, 1099
BspMI ACCTGC 1 cut(s) 27
BspPI GGATC 4 cut(s) 1073, 1086, 1092, 1105
BspT107I GGYRCC 2 cut(s) 93, 212
BspTNI GGTCTC 1 cut(s) 115
BsrDI GCAATG 2 cut(s) 358, 784
BsrI ACTGG 1 cut(s) 596
BssECI CCNNGG 2 cut(s) 216, 225
BssMI GATC 3 cut(s) 1078, 1097, 1225
BssNI GRCGYC 1 cut(s) 894
Bst2UI CCWGG 1 cut(s) 226
Bst4CI ACNGT 5 cut(s) 49, 305, 406, 716, 740
Bst6I CTCTTC 2 cut(s) 1131, 1259
BstACI GRCGYC 1 cut(s) 894
BstAPI GCANNNNNTGC 2 cut(s) 212, 579
BstBAI YACGTR 2 cut(s) 251, 525
BstC8I GCNNGC 2 cut(s) 141, 436
BstDEI CTNAG 5 cut(s) 201, 702, 930, 1025, 1128
BstF5I GGATG 5 cut(s) 221, 840, 903, 1112, 1117
BstHHI GCGC 1 cut(s) 774
BstKTI GATC 3 cut(s) 1081, 1100, 1228
BstMAI GTCTC 3 cut(s) 115, 722, 992
BstMBI GATC 3 cut(s) 1078, 1097, 1225
BstMWI GCNNNNNNNGC 6 cut(s) 140, 149, 212, 227, 314, 579
BstNI CCWGG 1 cut(s) 226
BstNSI RCATGY 1 cut(s) 438
BstSCI CCNGG 3 cut(s) 165, 215, 224
BstSFI CTRYAG 1 cut(s) 335
BstSLI GKGCMC 2 cut(s) 98, 256
BstV1I GCAGC 3 cut(s) 174, 443, 1033
BstV2I GAAGAC 1 cut(s) 889
BstX2I RGATCY 2 cut(s) 1078, 1097
BstXI CCANNNNNNTGG 1 cut(s) 1123
BstYI RGATCY 2 cut(s) 1078, 1097
BsuRI GGCC 3 cut(s) 230, 344, 947
BtgZI GCGATG 1 cut(s) 217
BtsCI GGATG 5 cut(s) 221, 840, 903, 1112, 1117
BtsIMutI CAGTG 3 cut(s) 301, 822, 1245
BveI ACCTGC 1 cut(s) 27
Cac8I GCNNGC 2 cut(s) 141, 436
CfoI GCGC 1 cut(s) 774
Cfr13I GGNCC 5 cut(s) 228, 323, 358, 485, 945
CseI GACGC 2 cut(s) 539, 883
Csp6I GTAC 1 cut(s) 460
CviAII CATG 4 cut(s) 435, 467, 845, 913
CviQI GTAC 1 cut(s) 460
DdeI CTNAG 5 cut(s) 201, 702, 930, 1025, 1128
DpnI GATC 3 cut(s) 1080, 1099, 1227
DpnII GATC 3 cut(s) 1078, 1097, 1225
DraI TTTAAA 1 cut(s) 1074
Eam1104I CTCTTC 2 cut(s) 1131, 1259
EarI CTCTTC 2 cut(s) 1131, 1259
Ecl136II GAGCTC 1 cut(s) 1132
Eco24I GRGCYC 2 cut(s) 454, 1134
Eco31I GGTCTC 1 cut(s) 115
Eco47I GGWCC 3 cut(s) 323, 358, 485
Eco53kI GAGCTC 1 cut(s) 1132
Eco72I CACGTG 1 cut(s) 251
EcoICRI GAGCTC 1 cut(s) 1132
EcoO109I RGGNCCY 3 cut(s) 323, 358, 485
EcoRI GAATTC 1 cut(s) 765
EcoRII CCWGG 1 cut(s) 224
EcoT22I ATGCAT 1 cut(s) 6
EcoT38I GRGCYC 2 cut(s) 454, 1134
FaeI CATG 4 cut(s) 438, 470, 848, 916
FaqI GGGAC 4 cut(s) 498, 672, 725, 979
FatI CATG 4 cut(s) 434, 466, 844, 912
FauI CCCGC 5 cut(s) 132, 313, 431, 578, 1006
FauNDI CATATG 1 cut(s) 244
Fnu4HI GCNGC 4 cut(s) 163, 318, 432, 1047
FokI GGATG 5 cut(s) 208, 847, 890, 1119, 1124
FriOI GRGCYC 2 cut(s) 454, 1134
Fsp4HI GCNGC 4 cut(s) 163, 318, 432, 1047
FspBI CTAG 1 cut(s) 723
GlaI GCGC 1 cut(s) 773
GluI GCNGC 4 cut(s) 163, 318, 432, 1047
GsaI CCCAGC 1 cut(s) 1152
HaeIII GGCC 3 cut(s) 230, 344, 947
HapII CCGG 3 cut(s) 91, 167, 216
HgaI GACGC 2 cut(s) 539, 883
HhaI GCGC 1 cut(s) 774
Hin1I GRCGYC 1 cut(s) 894
Hin1II CATG 4 cut(s) 438, 470, 848, 916
Hin6I GCGC 1 cut(s) 772
HinP1I GCGC 1 cut(s) 772
HincII GTYRAC 1 cut(s) 45
HindII GTYRAC 1 cut(s) 45
HindIII AAGCTT 1 cut(s) 959
HinfI GANTC 2 cut(s) 293, 539
HpaII CCGG 3 cut(s) 91, 167, 216
HphI GGTGA 2 cut(s) 1175, 1222
Hpy166II GTNNAC 2 cut(s) 45, 52
Hpy188I TCNGA 4 cut(s) 121, 194, 552, 744
Hpy188III TCNNGA 5 cut(s) 587, 670, 779, 854, 907
Hpy8I GTNNAC 2 cut(s) 45, 52
HpyAV CCTTC 8 cut(s) 100, 189, 334, 341, 407, 508, 935, 1189
HpyCH4III ACNGT 5 cut(s) 49, 305, 406, 716, 740
HpyCH4IV ACGT 4 cut(s) 250, 524, 972, 1208
HpyF10VI GCNNNNNNNGC 6 cut(s) 140, 149, 212, 227, 314, 579
HpyF3I CTNAG 5 cut(s) 201, 702, 930, 1025, 1128
HpySE526I ACGT 4 cut(s) 250, 524, 972, 1208
Hsp92I GRCGYC 1 cut(s) 894
Hsp92II CATG 4 cut(s) 438, 470, 848, 916
HspAI GCGC 1 cut(s) 772
Kzo9I GATC 3 cut(s) 1078, 1097, 1225
Lsp1109I GCAGC 3 cut(s) 174, 443, 1033
LweI GCATC 6 cut(s) 230, 245, 627, 906, 956, 1102
MaeI CTAG 1 cut(s) 723
MaeII ACGT 4 cut(s) 250, 524, 972, 1208
MaeIII GTNAC 3 cut(s) 499, 1173, 1204
MalI GATC 3 cut(s) 1080, 1099, 1227
MboI GATC 3 cut(s) 1078, 1097, 1225
MboII GAAGA 6 cut(s) 429, 814, 889, 1148, 1178, 1246
MfeI CAATTG 1 cut(s) 423
MflI RGATCY 2 cut(s) 1078, 1097
MhlI GDGCHC 5 cut(s) 98, 256, 454, 567, 1134
MluCI AATT 7 cut(s) 23, 423, 494, 553, 753, 765, 1016
MlyI GAGTC 2 cut(s) 302, 548
MmeI TCCRAC 3 cut(s) 588, 722, 890
Mph1103I ATGCAT 1 cut(s) 6
MseI TTAA 2 cut(s) 924, 1073
MslI CAYNNNNRTG 1 cut(s) 57
MspA1I CMGCKG 1 cut(s) 1103
MspI CCGG 3 cut(s) 91, 167, 216
MspR9I CCNGG 3 cut(s) 167, 217, 226
MunI CAATTG 1 cut(s) 423
MvaI CCWGG 1 cut(s) 226
MwoI GCNNNNNNNGC 6 cut(s) 140, 149, 212, 227, 314, 579
NciI CCSGG 2 cut(s) 167, 217
NdeI CATATG 1 cut(s) 244
NdeII GATC 3 cut(s) 1078, 1097, 1225
NlaIII CATG 4 cut(s) 438, 470, 848, 916
NlaIV GGNNCC 7 cut(s) 95, 214, 324, 486, 946, 1080, 1099
NmuCI GTSAC 2 cut(s) 499, 1204
NsiI ATGCAT 1 cut(s) 6
NspI RCATGY 1 cut(s) 438
PaeI GCATGC 1 cut(s) 438
PflFI GACNNNGTC 1 cut(s) 593
PkrI GCNGC 4 cut(s) 164, 319, 433, 1048
PleI GAGTC 2 cut(s) 301, 547
PmaCI CACGTG 1 cut(s) 251
PmlI CACGTG 1 cut(s) 251
PpsI GAGTC 2 cut(s) 301, 547
Ppu21I YACGTR 2 cut(s) 251, 525
PpuMI RGGWCCY 3 cut(s) 323, 358, 485
Psp124BI GAGCTC 1 cut(s) 1134
Psp5II RGGWCCY 3 cut(s) 323, 358, 485
Psp6I CCWGG 1 cut(s) 224
PspCI CACGTG 1 cut(s) 251
PspFI CCCAGC 1 cut(s) 1148
PspGI CCWGG 1 cut(s) 224
PspN4I GGNNCC 7 cut(s) 95, 214, 324, 486, 946, 1080, 1099
PspPI GGNCC 5 cut(s) 228, 323, 358, 485, 945
PspPPI RGGWCCY 3 cut(s) 323, 358, 485
PsuI RGATCY 2 cut(s) 1078, 1097
PsyI GACNNNGTC 1 cut(s) 593
RsaI GTAC 1 cut(s) 461
RsaNI GTAC 1 cut(s) 460
RseI CAYNNNNRTG 1 cut(s) 57
SacI GAGCTC 1 cut(s) 1134
SaqAI TTAA 2 cut(s) 924, 1073
SatI GCNGC 4 cut(s) 163, 318, 432, 1047
Sau3AI GATC 3 cut(s) 1078, 1097, 1225
Sau96I GGNCC 5 cut(s) 228, 323, 358, 485, 945
SchI GAGTC 2 cut(s) 302, 548
ScrFI CCNGG 3 cut(s) 167, 217, 226
SduI GDGCHC 5 cut(s) 98, 256, 454, 567, 1134
SfaNI GCATC 6 cut(s) 230, 245, 627, 906, 956, 1102
SfcI CTRYAG 1 cut(s) 335
SinI GGWCC 3 cut(s) 323, 358, 485
SmiMI CAYNNNNRTG 1 cut(s) 57
SmlI CTYRAG 2 cut(s) 157, 989
SmoI CTYRAG 2 cut(s) 157, 989
SphI GCATGC 1 cut(s) 438
Sse9I AATT 7 cut(s) 23, 423, 494, 553, 753, 765, 1016
SsiI CCGC 8 cut(s) 139, 317, 320, 438, 463, 571, 999, 1101
SspMI CTAG 1 cut(s) 723
SstI GAGCTC 1 cut(s) 1134
StyD4I CCNGG 3 cut(s) 165, 215, 224
TaaI ACNGT 5 cut(s) 49, 305, 406, 716, 740
TaiI ACGT 4 cut(s) 253, 527, 975, 1211
TaqI TCGA 2 cut(s) 964, 1134
TasI AATT 7 cut(s) 23, 423, 494, 553, 753, 765, 1016
TauI GCSGC 1 cut(s) 320
Tru1I TTAA 2 cut(s) 924, 1073
Tru9I TTAA 2 cut(s) 924, 1073
TscAI CASTG 3 cut(s) 308, 829, 1252
TseFI GTSAC 2 cut(s) 499, 1204
TseI GCWGC 3 cut(s) 162, 431, 1046
Tsp45I GTSAC 2 cut(s) 499, 1204
TspDTI ATGAA 6 cut(s) 75, 358, 373, 483, 660, 954
TspRI CASTG 3 cut(s) 308, 829, 1252
Tth111I GACNNNGTC 1 cut(s) 593
VpaK11BI GGWCC 3 cut(s) 323, 358, 485
XapI RAATTY 3 cut(s) 494, 765, 1016
XceI RCATGY 1 cut(s) 438
XspI CTAG 1 cut(s) 723
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.