RLG00000017301

protein desumoylation

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0000124
Physical Location & Seq
Reverse (-)
15090612 .. 15094056
3445 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000017301

Sequence Viewer

Length: 2220 bp
ATGGGCGGTGGAGGACTCCCATATGGTGTCGCAAACGCTGAAAGAGGCAAGAGAGCCAGTGAACTCGTAATTGGGGACTTGGTGACGCATTCCAACCCCGCTGAGTTCTCATTCACTGTTGCAGATCTGTCACCGGAAAAGGTGGCTGCAGTGGCTGAAATACGCTACGAGAGTCTGTTGGATATTGGCTGTAACACCCTTGTCGGGGACCACACAGTGTCAATTCACGGTCGCAAATATCCAATAAACGAGGAGGAGTTCGGCCGTGTTATGGGAGTGCGTGATGGGGGTAGGATTCAGTATTGTCTTCTGGAGGAGATTGTGAGGGAACGTGATCAGGTTGACGCCACTTTCCGGATTGCCTTCGCCTTGCTTGCACTGGGTCTAGTGCTGTGCCCCGGGACAGTGGACGCGATTGACACCTCCATGCTACTGCCACTGGTGGAAACCGGTCAGATTGTGAAGAAAAACTGGGCCTCGTTCTGTGTGAAAAGGTTGGAAGGAAAGGTGATGAATCAGAGGGAATTTGGGGAGGGTGTGGTTGGAGGGTGCGTATTGTTTCTGCAGGTTCTTTACTTCGACAAGGTTGGGGAGGCAACCTTTCACATCGATAGGTCAATTCTACCACTCAGGGCATGGGGAGAATTTGAGGTTAGGCAGGTGATTGGCATGATCAGAACATATGGTGGTTTCAAGAGCCCAATTGTTTTGATGGAAAGGAGTAAGCGTTCGAAGATGGCAAGTAAGTGCTGTGTGGATGACGGTGCATTTGGACTAGGACTAAGGAGGGGGGTTCATGAGGACATTTTCGACGTAAAGTTGGAAATGATGGGGTTTAAGAATGACTTGTGCAGGCTCCGGGATGTTGTTGGAAAGCTTCAGCCGGACATGGTGGAGGTTACAAGGAAAGTAGAGATTATAGTACAGCTGATTGGTAGCTTGAAGGAGGATTGTGCTGAGAAGGTGAAGATGGAAATGAGGCGATACCTACCTCAAAGGGGGGATGCGAATGACGGTCATACAGTCCCGGTGTGGACTCCACCGAAGAATGGCTCAAAGGGAGCTGCAAAGTCAGTACTGGATGCAGCATTTGAACTGGAGGAAAACAGATATCACACACCAAGTCGAGGTGCTAACCAGGCCATTGAGGTAACCGGATATGCCATTGGGAAGGCGGCTGTCACATCTCCACATGCACGTGCCCTTTTCACTTACGCAATAGCGCACAATCTCCAACCGGACTACCCCAACGGTGTGAACTATAAGGGAGACGGAATCAATGTCAACAAAATGACTACTGTGCCAGGTCCTTACATTCTGCTGAATCCTTTAGAGGATGATGACAATTTTCTGATCAATTACATCTTCTTGGGGGGGAAGCAATGCACGATGGAGGAAGGAAGAATTATAGTTGCATCAAGTGGGAACAGTAGGTCTATACTTTACCGTGATGAAATATCATGCTTGGGCCCAAAGAAACTTCTGACAAGCTTCGAAAAGGCAAATGCGTATAAACCTTCTGAGTTGTTTCGTGATTGGGTGGAGCACACAAGGACACTGTGCAACCTTCACAGGTTCAATGGTTGTTTGGTAGATTGCAAGAGGATGTTTCTGCCTATGCATGATGCCTCTGATGGGGGGCATTGGTTTCTGCTGGTGGTTGATATGGAAAATGAGGTGGCTGAAGTTTGGGACAGTCTTCCTAATGAGTTCTCAAGTGCCATTAGATGGGACATTGCAGTTACAACGCTGCGCCATCTTGACCATTGCTTTTACTTTGACAAGATAAGGAACAAAGGGAGCACCACTGAGTTTGGGTTGTTCGACTATGTTGTTCCGGAAAATGTACCGAAGCAGATCAATGGTTATGATTGTGGCATATATGTCATACAGAATATGATGCACTATCGGACCAATTGGGCTAAAGGGGCCAGCTCGGATGATCTTCGGTCAAGTGTGCTTCTGTATTGTCTCAAATCCCCTGCTAATGAGAGAGCCAAATTAACCCTTAGAGAAGCACGGGCATTTGCTGCGGAGGAGGGAAGTTTCAAAGAGGACAACGTCCTCGCTGCTACGACAAAGGGTTATTCGGGCACTGTAGGAGGTAACAAGGACCTGAGGGGAGGCTTTCCCAAGGGAATGTTCCTGGAGAGGGTCGTCGATGAAGAAGGGACTGCGGAAGTAATCTTTGTGTCCTACAGGGTGAATTGGGACAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_C48

Protein Analysis

740

Amino Acids

82.42

Weight (kDa)

6.05

Isoelectric Point (pI)

35.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_C48 PF02902 500 - 636 4e-14 Ulp1 protease family, C-terminal catalytic domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000124)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g10992 FvH4_2g25150 FvH4_2g27910 FvH4_2g27931 FvH4_4g09443 FvH4_4g09490 FvH4_4g15990 FvH4_4g15991 FvH4_6g07180 FvH4_6g40320 FvH4_7g10222 FvH4_7g10251
rosa_chinensis RchiOBHm_Chr2g0155611
rosa_laevigata RLG00000009253 RLG00000009254 RLG00000011848 RLG00000017301 RLG00000017302 RLG00000034909
rosa_multiflora Rmu_co8063658.1_g000001 Rmu_co8240443.1_g000001 Rmu_co8264451.1_g000001 Rmu_co8381937.1_g000001 Rmu_co8419903.1_g000001 Rmu_co8513405.1_g000002 Rmu_co8522915.1_g000001 Rmu_co8522915.1_g000004 Rmu_sc0000279.1_g000024 Rmu_sc0000279.1_g000048 Rmu_sc0000642.1_g000017 Rmu_sc0002045.1_g000015 Rmu_sc0002045.1_g000018 Rmu_sc0002045.1_g000023 Rmu_sc0002045.1_g000028 Rmu_sc0003047.1_g000008 Rmu_sc0003179.1_g000019 Rmu_sc0003179.1_g000020 Rmu_sc0003179.1_g000022 Rmu_sc0003179.1_g000023 Rmu_sc0003422.1_g000011 Rmu_sc0004999.1_g000014 Rmu_sc0005712.1_g000018 Rmu_sc0005712.1_g000023 Rmu_sc0006198.1_g000019 Rmu_sc0006373.1_g000005 Rmu_sc0006514.1_g000028 Rmu_sc0006514.1_g000031 Rmu_sc0007367.1_g000010 Rmu_sc0011475.1_g000002 Rmu_sc0025304.1_g000001 Rmu_ssc0000161.1_g000030 Rmu_ssc0000161.1_g000032 Rmu_ssc0000387.1_g000018
rosa_roxburghii Rroxscaffold_1G00031090 Rroxscaffold_1G00032770 Rroxscaffold_1G00068950 Rroxscaffold_1G00069000 Rroxscaffold_1G00069010 Rroxscaffold_2G00129060 Rroxscaffold_2G00129100 Rroxscaffold_4G00309310 Rroxscaffold_4G00309320 Rroxscaffold_5G00350620 Rroxscaffold_5G00350630 Rroxscaffold_7G00162650 Rroxscaffold_7G00162660 Rroxscaffold_7G00162710
rosa_rugosa Rorug02G0564700 Rorug02G0564700 Rorug03G0343100 Rorug04G0189700 Rorug05G0102800 Rorug05G0102900 Rorug05G0103000 Rorug05G0106500 Rorug05G0106600 Rorug05G0106700 Rorug05G0252800 Rorug07G0182100 Rorug07G0283500 Rorug07G0283600
rosa_samantha Rh1AG004000 Rh1AG004100 Rh1AG004200 Rh1AG004400 Rh1AG004500 Rh1AG004600 Rh1AG004800 Rh1AG004900 Rh1AG005300 Rh1AG007000 Rh1AG115000 Rh1CG049400 Rh1CG055400 Rh1CG111000 Rh1DG053600 Rh1DG053700 Rh1DG059300 Rh1DG119700 Rh1DG177100 Rh1DG177200 Rh2AG353800 Rh2AG354000 Rh2AG354100 Rh2AG354300 Rh2AG354400 Rh2AG354500 Rh2AG354600 Rh2AG354700 Rh2AG642300 Rh2AG642400 Rh2AG642500 Rh2BG336500 Rh2BG336600 Rh2BG336700 Rh2BG336800 Rh2BG336900 Rh2CG299900 Rh2CG300000 Rh2CG300100 Rh2DG337000 Rh2DG337100 Rh3AG246600 Rh3BG121900 Rh3BG122300 Rh3BG122600 Rh3BG122700 Rh3DG304800 Rh3DG304900 Rh4AG148800 Rh4AG249000 Rh4AG249100 Rh4AG249200 Rh4BG182700 Rh4BG182800 Rh4BG182900 Rh4BG254400 Rh4BG254500 Rh4BG254600 Rh4CG155500 Rh4CG155700 Rh4DG057900 Rh4DG058000 Rh4DG058100 Rh4DG058200 Rh4DG129100 Rh5AG364500 Rh5AG364600 Rh5AG364800 Rh5AG365300 Rh5CG363700 Rh5CG497600 Rh5DG239500 Rh5DG239600 Rh6AG173500 Rh6AG175400 Rh6BG075900 Rh6BG076300 Rh6BG076400 Rh6BG076500 Rh6BG076600 Rh6CG151000 Rh6CG151200 Rh6CG151300 Rh6CG151400 Rh6CG205200 Rh6CG205300 Rh6CG419700 Rh6CG419900 Rh6CG420100 Rh6DG498700 Rh6DG498800 Rh7AG329000 Rh7AG329100 Rh7AG329300 Rh7AG329400 Rh7AG353000 Rh7AG353100 Rh7AG353300 Rh7AG353400 Rh7AG353500 Rh7CG346400 Rh7CG346500 Rh7CG346700 Rh7CG370800 Rh7CG370900 Rh7CG371000 Rh7CG371100 Rh7DG325000 Rh7DG325100 Rh7DG325200 Rh7DG325300 Rh7DG353100 Rh7DG353200 Rh7DG353300 Rh7DG363500 Rh7DG364000
rosa_wichuraiana Rw0G002290 Rw0G012780 Rw1G000260 Rw1G000270 Rw1G010400 Rw1G010410 Rw1G010420 Rw1G010430 Rw1G010440 Rw2G003210 Rw2G003220 Rw4G010970 Rw5G048520 Rw6G013320 Rw6G013470 Rw6G014940 Rw6G016570 Rw6G016590 Rw6G016600 Rw6G016610 Rw6G016620 Rw6G035450 Rw7G027760 Rw7G030460

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 649
Acc36I ACCTGC 2 cut(s) 556, 649
AccB7I CCANNNNNTGG 1 cut(s) 1728
AccII CGCG 1 cut(s) 413
AccIII TCCGGA 2 cut(s) 354, 1837
AciI CCGC 5 cut(s) 6, 99, 1175, 2033, 2177
AcoI YGGCCR 1 cut(s) 262
AcsI RAATTY 2 cut(s) 524, 644
AcuI CTGAAG 2 cut(s) 863, 1704
AcvI CACGTG 1 cut(s) 1199
AcyI GRCGYC 1 cut(s) 345
AdeI CACNNNGTG 1 cut(s) 217
AfaI GTAC 3 cut(s) 924, 1077, 1848
AgeI ACCGGT 1 cut(s) 449
AgsI TTSAA 5 cut(s) 694, 943, 1094, 1579, 2050
AjnI CCWGG 3 cut(s) 1137, 1303, 2145
AjuI GAANNNNNNNTTGG 4 cut(s) 54, 86, 2126, 2158
AloI GAACNNNNNNTCC 2 cut(s) 712, 744
AluBI AGCT 6 cut(s) 877, 928, 939, 1064, 1491, 1935
AluI AGCT 6 cut(s) 877, 928, 939, 1064, 1491, 1935
Alw21I GWGCWC 2 cut(s) 1548, 1805
Alw26I GTCTC 2 cut(s) 1263, 1976
AlwNI CAGNNNCTG 1 cut(s) 155
Ama87I CYCGRG 1 cut(s) 398
Aor13HI TCCGGA 2 cut(s) 354, 1837
AoxI GGCC 5 cut(s) 262, 474, 1140, 1468, 1929
ApaI GGGCCC 1 cut(s) 1472
ApeKI GCWGC 6 cut(s) 146, 1064, 1085, 1750, 2030, 2069
ApoI RAATTY 2 cut(s) 524, 644
ArsI GACNNNNNNTTYG 2 cut(s) 752, 784
AsiGI ACCGGT 1 cut(s) 449
AspLEI GCGC 2 cut(s) 1225, 1755
AspS9I GGNCC 8 cut(s) 208, 474, 1307, 1468, 1469, 1911, 1929, 2113
AsuC2I CCSGG 4 cut(s) 399, 400, 860, 1028
AsuHPI GGTGA 6 cut(s) 94, 123, 520, 673, 976, 2215
AsuII TTCGAA 2 cut(s) 731, 1494
AvaI CYCGRG 1 cut(s) 398
AvaII GGWCC 4 cut(s) 208, 1307, 1911, 2113
AxyI CCTNAGG 1 cut(s) 2117
BaeGI GKGCMC 4 cut(s) 398, 1204, 1472, 2096
BanII GRGCYC 2 cut(s) 701, 1472
BbrPI CACGTG 1 cut(s) 1199
BbsI GAAGAC 2 cut(s) 299, 1691
Bbv12I GWGCWC 2 cut(s) 1548, 1805
BbvI GCAGC 6 cut(s) 133, 1051, 1097, 1737, 2017, 2056
BccI CCATC 9 cut(s) 278, 706, 730, 823, 964, 1384, 1628, 1722, 1764
BceAI ACGGC 1 cut(s) 249
BciT130I CCWGG 3 cut(s) 1139, 1305, 2147
BclI TGATCA 3 cut(s) 334, 672, 1353
BcnI CCSGG 4 cut(s) 399, 400, 860, 1028
BcoDI GTCTC 2 cut(s) 1263, 1976
BfaI CTAG 2 cut(s) 386, 776
BfmI CTRYAG 4 cut(s) 147, 563, 2097, 2197
BfuAI ACCTGC 2 cut(s) 556, 649
BglII AGATCT 1 cut(s) 124
BisI GCNGC 7 cut(s) 147, 1065, 1086, 1176, 1751, 2031, 2070
BlsI GCNGC 7 cut(s) 148, 1066, 1087, 1177, 1752, 2032, 2071
BmcAI AGTACT 1 cut(s) 1077
Bme1390I CCNGG 7 cut(s) 399, 400, 860, 1028, 1139, 1305, 2147
Bme18I GGWCC 4 cut(s) 208, 1307, 1911, 2113
BmeT110I CYCGRG 1 cut(s) 398
BmgT120I GGNCC 8 cut(s) 208, 474, 1307, 1468, 1469, 1911, 1929, 2113
BmiI GGNNCC 4 cut(s) 209, 857, 1470, 1930
BmrFI CCNGG 7 cut(s) 399, 400, 860, 1028, 1139, 1305, 2147
BmrI ACTGGG 2 cut(s) 389, 481
BmsI GCATC 5 cut(s) 994, 1072, 1424, 1615, 1890
BmuI ACTGGG 2 cut(s) 389, 481
BpiI GAAGAC 2 cut(s) 299, 1691
BpmI CTGGAG 3 cut(s) 332, 1118, 2168
Bpu14I TTCGAA 2 cut(s) 731, 1494
BpuEI CTTGAG 1 cut(s) 1699
BpuMI CCSGG 4 cut(s) 399, 400, 860, 1028
Bsa29I ATCGAT 1 cut(s) 609
BsaAI YACGTR 1 cut(s) 1199
BsaHI GRCGYC 1 cut(s) 345
BsaJI CCNNGG 3 cut(s) 397, 398, 2133
BsaWI WCCGGW 6 cut(s) 133, 354, 449, 1154, 1237, 1837
BsaXI ACNNNNNCTCC 4 cut(s) 537, 567, 712, 742
Bse118I RCCGGY 1 cut(s) 449
Bse1I ACTGG 6 cut(s) 57, 384, 444, 476, 1083, 1101
Bse21I CCTNAGG 1 cut(s) 2117
Bse3DI GCAATG 3 cut(s) 1388, 1734, 1765
BseAI TCCGGA 2 cut(s) 354, 1837
BseBI CCWGG 3 cut(s) 1139, 1305, 2147
BseCI ATCGAT 1 cut(s) 609
BseDI CCNNGG 3 cut(s) 397, 398, 2133
BseGI GGATG 7 cut(s) 763, 868, 1009, 1087, 1342, 1611, 1945
BseMI GCAATG 3 cut(s) 1388, 1734, 1765
BseMII CTCAG 6 cut(s) 93, 643, 948, 1512, 1800, 2108
BseNI ACTGG 6 cut(s) 57, 384, 444, 476, 1083, 1101
BseRI GAGGAG 4 cut(s) 266, 269, 329, 2051
BseSI GKGCMC 4 cut(s) 398, 1204, 1472, 2096
BseX3I CGGCCG 1 cut(s) 262
BseXI GCAGC 6 cut(s) 133, 1051, 1097, 1737, 2017, 2056
BsgI GTGCAG 1 cut(s) 871
Bsh1236I CGCG 1 cut(s) 413
Bsh1285I CGRYCG 2 cut(s) 232, 265
BshFI GGCC 5 cut(s) 264, 476, 1142, 1470, 1931
BshTI ACCGGT 1 cut(s) 449
BshVI ATCGAT 1 cut(s) 609
BsiEI CGRYCG 2 cut(s) 232, 265
BsiHKAI GWGCWC 2 cut(s) 1548, 1805
BsiHKCI CYCGRG 1 cut(s) 398
BslFI GGGAC 7 cut(s) 89, 221, 415, 1010, 1706, 1745, 2185
BsmAI GTCTC 2 cut(s) 1263, 1976
BsmBI CGTCTC 1 cut(s) 1263
BsmFI GGGAC 7 cut(s) 89, 221, 415, 1010, 1706, 1745, 2185
BsmI GAATGC 1 cut(s) 88
BsnI GGCC 5 cut(s) 264, 476, 1142, 1470, 1931
BsoBI CYCGRG 1 cut(s) 398
Bsp119I TTCGAA 2 cut(s) 731, 1494
Bsp120I GGGCCC 1 cut(s) 1468
Bsp1286I GDGCHC 7 cut(s) 398, 701, 1204, 1472, 1548, 1805, 2096
Bsp13I TCCGGA 2 cut(s) 354, 1837
Bsp143I GATC 6 cut(s) 124, 334, 672, 1353, 1857, 1942
BspACI CCGC 5 cut(s) 6, 99, 1175, 2033, 2177
BspANI GGCC 5 cut(s) 264, 476, 1142, 1470, 1931
BspCNI CTCAG 6 cut(s) 94, 642, 949, 1513, 1801, 2109
BspDI ATCGAT 1 cut(s) 609
BspEI TCCGGA 2 cut(s) 354, 1837
BspFNI CGCG 1 cut(s) 413
BspHI TCATGA 1 cut(s) 796
BspLI GGNNCC 4 cut(s) 209, 857, 1470, 1930
BspMAI CTGCAG 2 cut(s) 151, 567
BspMI ACCTGC 2 cut(s) 556, 649
BspT104I TTCGAA 2 cut(s) 731, 1494
BsrDI GCAATG 3 cut(s) 1388, 1734, 1765
BsrFI RCCGGY 1 cut(s) 449
BsrI ACTGG 6 cut(s) 57, 384, 444, 476, 1083, 1101
BssAI RCCGGY 1 cut(s) 449
BssECI CCNNGG 3 cut(s) 397, 398, 2133
BssMI GATC 6 cut(s) 124, 334, 672, 1353, 1857, 1942
BssNI GRCGYC 1 cut(s) 345
BssT1I CCWWGG 1 cut(s) 2133
Bst2UI CCWGG 3 cut(s) 1139, 1305, 2147
BstACI GRCGYC 1 cut(s) 345
BstAPI GCANNNNNTGC 1 cut(s) 2030
BstBAI YACGTR 1 cut(s) 1199
BstBI TTCGAA 2 cut(s) 731, 1494
BstC8I GCNNGC 3 cut(s) 375, 854, 1933
BstDEI CTNAG 8 cut(s) 102, 629, 782, 957, 1521, 1809, 2009, 2117
BstEII GGTNACC 1 cut(s) 1150
BstF5I GGATG 7 cut(s) 763, 868, 1009, 1087, 1342, 1611, 1945
BstFNI CGCG 1 cut(s) 413
BstHHI GCGC 2 cut(s) 1225, 1755
BstKTI GATC 6 cut(s) 127, 337, 675, 1356, 1860, 1945
BstMAI GTCTC 2 cut(s) 1263, 1976
BstMBI GATC 6 cut(s) 124, 334, 672, 1353, 1857, 1942
BstMCI CGRYCG 2 cut(s) 232, 265
BstMWI GCNNNNNNNGC 5 cut(s) 152, 374, 1139, 1928, 2030
BstNI CCWGG 3 cut(s) 1139, 1305, 2147
BstNSI RCATGY 1 cut(s) 1196
BstPI GGTNACC 1 cut(s) 1150
BstSCI CCNGG 7 cut(s) 397, 398, 858, 1026, 1137, 1303, 2145
BstSFI CTRYAG 4 cut(s) 147, 563, 2097, 2197
BstSLI GKGCMC 4 cut(s) 398, 1204, 1472, 2096
BstUI CGCG 1 cut(s) 413
BstV1I GCAGC 6 cut(s) 133, 1051, 1097, 1737, 2017, 2056
BstV2I GAAGAC 2 cut(s) 299, 1691
BstX2I RGATCY 1 cut(s) 124
BstYI RGATCY 1 cut(s) 124
BstZI CGGCCG 1 cut(s) 262
Bsu15I ATCGAT 1 cut(s) 609
Bsu36I CCTNAGG 1 cut(s) 2117
BsuRI GGCC 5 cut(s) 264, 476, 1142, 1470, 1931
BsuTUI ATCGAT 1 cut(s) 609
BtsCI GGATG 7 cut(s) 763, 868, 1009, 1087, 1342, 1611, 1945
BtsI GCAGTG 1 cut(s) 156
BveI ACCTGC 2 cut(s) 556, 649
Cac8I GCNNGC 3 cut(s) 375, 854, 1933
CaiI CAGNNNCTG 1 cut(s) 155
CciI TCATGA 1 cut(s) 796
CfoI GCGC 2 cut(s) 1225, 1755
Cfr10I RCCGGY 1 cut(s) 449
Cfr13I GGNCC 8 cut(s) 208, 474, 1307, 1468, 1469, 1911, 1929, 2113
Cfr9I CCCGGG 1 cut(s) 398
ClaI ATCGAT 1 cut(s) 609
CseI GACGC 3 cut(s) 94, 353, 419
Csp6I GTAC 3 cut(s) 923, 1076, 1847
CspAI ACCGGT 1 cut(s) 449
CspCI CAANNNNNGTGG 2 cut(s) 1795, 1830
CviAII CATG 8 cut(s) 427, 636, 670, 797, 889, 1193, 1461, 1622
CviQI GTAC 3 cut(s) 923, 1076, 1847
DdeI CTNAG 8 cut(s) 102, 629, 782, 957, 1521, 1809, 2009, 2117
DpnI GATC 6 cut(s) 126, 336, 674, 1355, 1859, 1944
DpnII GATC 6 cut(s) 124, 334, 672, 1353, 1857, 1942
DraIII CACNNNGTG 1 cut(s) 217
EaeI YGGCCR 1 cut(s) 262
EagI CGGCCG 1 cut(s) 262
EclXI CGGCCG 1 cut(s) 262
Eco130I CCWWGG 1 cut(s) 2133
Eco24I GRGCYC 2 cut(s) 701, 1472
Eco32I GATATC 1 cut(s) 1112
Eco47I GGWCC 4 cut(s) 208, 1307, 1911, 2113
Eco52I CGGCCG 1 cut(s) 262
Eco57I CTGAAG 2 cut(s) 863, 1704
Eco72I CACGTG 1 cut(s) 1199
Eco81I CCTNAGG 1 cut(s) 2117
Eco88I CYCGRG 1 cut(s) 398
Eco91I GGTNACC 1 cut(s) 1150
EcoO109I RGGNCCY 2 cut(s) 1307, 2113
EcoO65I GGTNACC 1 cut(s) 1150
EcoRII CCWGG 3 cut(s) 1137, 1303, 2145
EcoRV GATATC 1 cut(s) 1112
EcoT14I CCWWGG 1 cut(s) 2133
EcoT22I ATGCAT 1 cut(s) 1623
EcoT38I GRGCYC 2 cut(s) 701, 1472
ErhI CCWWGG 1 cut(s) 2133
Esp3I CGTCTC 1 cut(s) 1263
FaeI CATG 8 cut(s) 430, 639, 673, 800, 892, 1196, 1464, 1625
FalI AAGNNNNNCTT 2 cut(s) 830, 862
FaqI GGGAC 7 cut(s) 89, 221, 415, 1010, 1706, 1745, 2185
FatI CATG 8 cut(s) 426, 635, 669, 796, 888, 1192, 1460, 1621
FauI CCCGC 1 cut(s) 106
FauNDI CATATG 2 cut(s) 22, 682
FbaI TGATCA 3 cut(s) 334, 672, 1353
Fnu4HI GCNGC 7 cut(s) 147, 1065, 1086, 1176, 1751, 2031, 2070
FokI GGATG 7 cut(s) 770, 875, 1016, 1094, 1349, 1618, 1952
FriOI GRGCYC 2 cut(s) 701, 1472
Fsp4HI GCNGC 7 cut(s) 147, 1065, 1086, 1176, 1751, 2031, 2070
FspBI CTAG 2 cut(s) 386, 776
GlaI GCGC 2 cut(s) 1224, 1754
GluI GCNGC 7 cut(s) 147, 1065, 1086, 1176, 1751, 2031, 2070
GsuI CTGGAG 3 cut(s) 332, 1118, 2168
HaeIII GGCC 5 cut(s) 264, 476, 1142, 1470, 1931
HgaI GACGC 3 cut(s) 94, 353, 419
HhaI GCGC 2 cut(s) 1225, 1755
Hin1I GRCGYC 1 cut(s) 345
Hin1II CATG 8 cut(s) 430, 639, 673, 800, 892, 1196, 1464, 1625
Hin6I GCGC 2 cut(s) 1223, 1753
HinP1I GCGC 2 cut(s) 1223, 1753
HincII GTYRAC 2 cut(s) 343, 1285
HindII GTYRAC 2 cut(s) 343, 1285
HindIII AAGCTT 2 cut(s) 875, 1489
HinfI GANTC 7 cut(s) 15, 172, 295, 514, 1036, 1275, 1324
HphI GGTGA 6 cut(s) 94, 123, 520, 673, 976, 2215
Hpy166II GTNNAC 6 cut(s) 62, 343, 409, 1035, 1258, 1285
Hpy188I TCNGA 9 cut(s) 456, 519, 677, 1353, 1485, 1522, 1633, 1911, 1939
Hpy188III TCNNGA 7 cut(s) 311, 355, 694, 797, 1532, 1760, 1838
Hpy8I GTNNAC 6 cut(s) 62, 343, 409, 1035, 1258, 1285
Hpy99I CGWCG 2 cut(s) 815, 2162
HpyAV CCTTC 9 cut(s) 373, 494, 937, 955, 1165, 1391, 1527, 1577, 2162
HpyCH4IV ACGT 4 cut(s) 331, 813, 1198, 2061
HpyF10VI GCNNNNNNNGC 5 cut(s) 152, 374, 1139, 1928, 2030
HpyF3I CTNAG 8 cut(s) 102, 629, 782, 957, 1521, 1809, 2009, 2117
HpySE526I ACGT 4 cut(s) 331, 813, 1198, 2061
Hsp92I GRCGYC 1 cut(s) 345
Hsp92II CATG 8 cut(s) 430, 639, 673, 800, 892, 1196, 1464, 1625
HspAI GCGC 2 cut(s) 1223, 1753
Kpn2I TCCGGA 2 cut(s) 354, 1837
Ksp22I TGATCA 3 cut(s) 334, 672, 1353
Kzo9I GATC 6 cut(s) 124, 334, 672, 1353, 1857, 1942
LmnI GCTCC 4 cut(s) 861, 1061, 1543, 1800
Lsp1109I GCAGC 6 cut(s) 133, 1051, 1097, 1737, 2017, 2056
LweI GCATC 5 cut(s) 994, 1072, 1424, 1615, 1890
MaeI CTAG 2 cut(s) 386, 776
MaeII ACGT 4 cut(s) 331, 813, 1198, 2061
MaeIII GTNAC 8 cut(s) 82, 129, 191, 898, 1150, 1180, 1741, 2105
MalI GATC 6 cut(s) 126, 336, 674, 1355, 1859, 1944
MboI GATC 6 cut(s) 124, 334, 672, 1353, 1857, 1942
MfeI CAATTG 2 cut(s) 702, 1915
MflI RGATCY 1 cut(s) 124
MhlI GDGCHC 7 cut(s) 398, 701, 1204, 1472, 1548, 1805, 2096
MlyI GAGTC 3 cut(s) 9, 181, 1030
MmeI TCCRAC 7 cut(s) 117, 159, 477, 523, 801, 850, 1258
Mph1103I ATGCAT 1 cut(s) 1623
MroI TCCGGA 2 cut(s) 354, 1837
MseI TTAA 2 cut(s) 837, 2003
MslI CAYNNNNRTG 2 cut(s) 425, 1197
MspA1I CMGCKG 2 cut(s) 101, 928
MspR9I CCNGG 7 cut(s) 399, 400, 860, 1028, 1139, 1305, 2147
MunI CAATTG 2 cut(s) 702, 1915
Mva1269I GAATGC 1 cut(s) 88
MvaI CCWGG 3 cut(s) 1139, 1305, 2147
MvnI CGCG 1 cut(s) 413
MwoI GCNNNNNNNGC 5 cut(s) 152, 374, 1139, 1928, 2030
NciI CCSGG 4 cut(s) 399, 400, 860, 1028
NdeI CATATG 2 cut(s) 22, 682
NdeII GATC 6 cut(s) 124, 334, 672, 1353, 1857, 1942
NlaIII CATG 8 cut(s) 430, 639, 673, 800, 892, 1196, 1464, 1625
NlaIV GGNNCC 4 cut(s) 209, 857, 1470, 1930
NmuCI GTSAC 3 cut(s) 82, 129, 1180
NsiI ATGCAT 1 cut(s) 1623
NspI RCATGY 1 cut(s) 1196
NspV TTCGAA 2 cut(s) 731, 1494
PagI TCATGA 1 cut(s) 796
PaqCI CACCTGC 1 cut(s) 649
PctI GAATGC 1 cut(s) 88
PfeI GAWTC 4 cut(s) 295, 514, 1275, 1324
PflFI GACNNNGTC 1 cut(s) 2060
PflMI CCANNNNNTGG 1 cut(s) 1728
PfoI TCCNGGA 2 cut(s) 858, 2145
PinAI ACCGGT 1 cut(s) 449
PkrI GCNGC 7 cut(s) 148, 1066, 1087, 1177, 1752, 2032, 2071
PleI GAGTC 3 cut(s) 9, 180, 1030
PmaCI CACGTG 1 cut(s) 1199
PmlI CACGTG 1 cut(s) 1199
PpsI GAGTC 3 cut(s) 9, 180, 1030
Ppu21I YACGTR 1 cut(s) 1199
PpuMI RGGWCCY 2 cut(s) 1307, 2113
Psp5II RGGWCCY 2 cut(s) 1307, 2113
Psp6I CCWGG 3 cut(s) 1137, 1303, 2145
PspCI CACGTG 1 cut(s) 1199
PspEI GGTNACC 1 cut(s) 1150
PspGI CCWGG 3 cut(s) 1137, 1303, 2145
PspN4I GGNNCC 4 cut(s) 209, 857, 1470, 1930
PspOMI GGGCCC 1 cut(s) 1468
PspPI GGNCC 8 cut(s) 208, 474, 1307, 1468, 1469, 1911, 1929, 2113
PspPPI RGGWCCY 2 cut(s) 1307, 2113
PstI CTGCAG 2 cut(s) 151, 567
PstNI CAGNNNCTG 1 cut(s) 155
PsuI RGATCY 1 cut(s) 124
PsyI GACNNNGTC 1 cut(s) 2060
PvuII CAGCTG 1 cut(s) 928
RsaI GTAC 3 cut(s) 924, 1077, 1848
RsaNI GTAC 3 cut(s) 923, 1076, 1847
RseI CAYNNNNRTG 2 cut(s) 425, 1197
SaqAI TTAA 2 cut(s) 837, 2003
SatI GCNGC 7 cut(s) 147, 1065, 1086, 1176, 1751, 2031, 2070
Sau3AI GATC 6 cut(s) 124, 334, 672, 1353, 1857, 1942
Sau96I GGNCC 8 cut(s) 208, 474, 1307, 1468, 1469, 1911, 1929, 2113
ScaI AGTACT 1 cut(s) 1077
SchI GAGTC 3 cut(s) 9, 181, 1030
ScrFI CCNGG 7 cut(s) 399, 400, 860, 1028, 1139, 1305, 2147
SduI GDGCHC 7 cut(s) 398, 701, 1204, 1472, 1548, 1805, 2096
SfaNI GCATC 5 cut(s) 994, 1072, 1424, 1615, 1890
SfcI CTRYAG 4 cut(s) 147, 563, 2097, 2197
SfuI TTCGAA 2 cut(s) 731, 1494
SinI GGWCC 4 cut(s) 208, 1307, 1911, 2113
SmaI CCCGGG 1 cut(s) 400
SmiMI CAYNNNNRTG 2 cut(s) 425, 1197
SmlI CTYRAG 1 cut(s) 1714
SmoI CTYRAG 1 cut(s) 1714
SsiI CCGC 5 cut(s) 6, 99, 1175, 2033, 2177
SspMI CTAG 2 cut(s) 386, 776
StyD4I CCNGG 7 cut(s) 397, 398, 858, 1026, 1137, 1303, 2145
StyI CCWWGG 1 cut(s) 2133
TaiI ACGT 4 cut(s) 334, 816, 1201, 2064
TaqI TCGA 8 cut(s) 579, 609, 731, 810, 1126, 1494, 1824, 2160
TaqII GACCGA 1 cut(s) 1938
TatI WGTACW 2 cut(s) 922, 1075
TauI GCSGC 1 cut(s) 1178
TfiI GAWTC 4 cut(s) 295, 514, 1275, 1324
Tru1I TTAA 2 cut(s) 837, 2003
Tru9I TTAA 2 cut(s) 837, 2003
TseFI GTSAC 3 cut(s) 82, 129, 1180
TseI GCWGC 6 cut(s) 146, 1064, 1085, 1750, 2030, 2069
Tsp45I GTSAC 3 cut(s) 82, 129, 1180
TspDTI ATGAA 4 cut(s) 527, 785, 1467, 2178
TspGWI ACGGA 1 cut(s) 1287
TspMI CCCGGG 1 cut(s) 398
Tth111I GACNNNGTC 1 cut(s) 2060
Van91I CCANNNNNTGG 1 cut(s) 1728
VpaK11BI GGWCC 4 cut(s) 208, 1307, 1911, 2113
XapI RAATTY 2 cut(s) 524, 644
XceI RCATGY 1 cut(s) 1196
XcmI CCANNNNNNNNNTGG 1 cut(s) 633
XmaI CCCGGG 1 cut(s) 398
XspI CTAG 2 cut(s) 386, 776
ZrmI AGTACT 1 cut(s) 1077
Zsp2I ATGCAT 1 cut(s) 1623
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.