No description available
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| B3 | PF02362 | 138 - 206 | 8.5e-06 | B3 DNA binding domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 359 |
| AccII | CGCG | 1 cut(s) | 612 |
| AciI | CCGC | 4 cut(s) | 282, 404, 465, 610 |
| AclWI | GGATC | 1 cut(s) | 344 |
| AcoI | YGGCCR | 1 cut(s) | 512 |
| AcsI | RAATTY | 2 cut(s) | 317, 569 |
| AfaI | GTAC | 2 cut(s) | 270, 288 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 359 |
| AgsI | TTSAA | 8 cut(s) | 20, 115, 178, 224, 396, 401, 574, 592 |
| AluBI | AGCT | 3 cut(s) | 56, 125, 139 |
| AluI | AGCT | 3 cut(s) | 56, 125, 139 |
| Alw26I | GTCTC | 1 cut(s) | 573 |
| AlwI | GGATC | 1 cut(s) | 344 |
| AoxI | GGCC | 2 cut(s) | 495, 512 |
| ApeKI | GCWGC | 1 cut(s) | 125 |
| ApoI | RAATTY | 2 cut(s) | 317, 569 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 302, 334 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 472 |
| AspS9I | GGNCC | 1 cut(s) | 607 |
| AsuC2I | CCSGG | 1 cut(s) | 598 |
| AsuHPI | GGTGA | 2 cut(s) | 391, 638 |
| AvaII | GGWCC | 1 cut(s) | 607 |
| BbvI | GCAGC | 1 cut(s) | 112 |
| BccI | CCATC | 1 cut(s) | 249 |
| BceAI | ACGGC | 1 cut(s) | 287 |
| BciVI | GTATCC | 1 cut(s) | 79 |
| BcnI | CCSGG | 1 cut(s) | 598 |
| BcoDI | GTCTC | 1 cut(s) | 573 |
| BfaI | CTAG | 1 cut(s) | 623 |
| BfuI | GTATCC | 1 cut(s) | 79 |
| BisI | GCNGC | 1 cut(s) | 126 |
| BlsI | GCNGC | 1 cut(s) | 127 |
| Bme1390I | CCNGG | 1 cut(s) | 598 |
| Bme18I | GGWCC | 1 cut(s) | 607 |
| BmgT120I | GGNCC | 1 cut(s) | 607 |
| BmrFI | CCNGG | 1 cut(s) | 598 |
| BpmI | CTGGAG | 1 cut(s) | 31 |
| BpuMI | CCSGG | 1 cut(s) | 598 |
| BsaJI | CCNNGG | 1 cut(s) | 597 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 359 |
| Bse1I | ACTGG | 2 cut(s) | 14, 93 |
| BseDI | CCNNGG | 1 cut(s) | 597 |
| BseGI | GGATG | 3 cut(s) | 160, 220, 260 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 359 |
| BseNI | ACTGG | 2 cut(s) | 14, 93 |
| BseXI | GCAGC | 1 cut(s) | 112 |
| Bsh1236I | CGCG | 1 cut(s) | 612 |
| BshFI | GGCC | 2 cut(s) | 497, 514 |
| BsiSI | CCGG | 1 cut(s) | 597 |
| BslFI | GGGAC | 2 cut(s) | 426, 614 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 359 |
| BsmAI | GTCTC | 1 cut(s) | 573 |
| BsmFI | GGGAC | 2 cut(s) | 426, 614 |
| BsnI | GGCC | 2 cut(s) | 497, 514 |
| Bsp143I | GATC | 1 cut(s) | 349 |
| BspACI | CCGC | 4 cut(s) | 282, 404, 465, 610 |
| BspANI | GGCC | 2 cut(s) | 497, 514 |
| BspFNI | CGCG | 1 cut(s) | 612 |
| BspPI | GGATC | 1 cut(s) | 344 |
| BsrI | ACTGG | 2 cut(s) | 14, 93 |
| BssECI | CCNNGG | 1 cut(s) | 597 |
| BssMI | GATC | 1 cut(s) | 349 |
| Bst4CI | ACNGT | 3 cut(s) | 82, 328, 417 |
| Bst6I | CTCTTC | 1 cut(s) | 463 |
| BstF5I | GGATG | 3 cut(s) | 160, 220, 260 |
| BstFNI | CGCG | 1 cut(s) | 612 |
| BstKTI | GATC | 1 cut(s) | 352 |
| BstMAI | GTCTC | 1 cut(s) | 573 |
| BstMBI | GATC | 1 cut(s) | 349 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 343 |
| BstSCI | CCNGG | 1 cut(s) | 596 |
| BstUI | CGCG | 1 cut(s) | 612 |
| BstV1I | GCAGC | 1 cut(s) | 112 |
| BsuI | GTATCC | 1 cut(s) | 79 |
| BsuRI | GGCC | 2 cut(s) | 497, 514 |
| BtsCI | GGATG | 3 cut(s) | 160, 220, 260 |
| BtsIMutI | CAGTG | 1 cut(s) | 100 |
| Cfr13I | GGNCC | 1 cut(s) | 607 |
| Csp6I | GTAC | 2 cut(s) | 269, 287 |
| CviAII | CATG | 4 cut(s) | 204, 347, 428, 477 |
| CviJI | RGCY | 8 cut(s) | 26, 56, 125, 139, 274, 388, 497, 514 |
| CviKI_1 | RGCY | 8 cut(s) | 26, 56, 125, 139, 274, 388, 497, 514 |
| CviQI | GTAC | 2 cut(s) | 269, 287 |
| DpnI | GATC | 1 cut(s) | 351 |
| DpnII | GATC | 1 cut(s) | 349 |
| EaeI | YGGCCR | 1 cut(s) | 512 |
| Eam1104I | CTCTTC | 1 cut(s) | 463 |
| EarI | CTCTTC | 1 cut(s) | 463 |
| EciI | GGCGGA | 1 cut(s) | 480 |
| Eco32I | GATATC | 1 cut(s) | 61 |
| Eco47I | GGWCC | 1 cut(s) | 607 |
| EcoRV | GATATC | 1 cut(s) | 61 |
| EcoT22I | ATGCAT | 3 cut(s) | 205, 348, 433 |
| FaeI | CATG | 4 cut(s) | 207, 350, 431, 480 |
| FaqI | GGGAC | 2 cut(s) | 426, 614 |
| FatI | CATG | 4 cut(s) | 203, 346, 427, 476 |
| FauI | CCCGC | 1 cut(s) | 397 |
| FauNDI | CATATG | 1 cut(s) | 144 |
| Fnu4HI | GCNGC | 1 cut(s) | 126 |
| FokI | GGATG | 3 cut(s) | 167, 227, 267 |
| Fsp4HI | GCNGC | 1 cut(s) | 126 |
| FspBI | CTAG | 1 cut(s) | 623 |
| GluI | GCNGC | 1 cut(s) | 126 |
| GsuI | CTGGAG | 1 cut(s) | 31 |
| HaeIII | GGCC | 2 cut(s) | 497, 514 |
| HapII | CCGG | 1 cut(s) | 597 |
| Hin1II | CATG | 4 cut(s) | 207, 350, 431, 480 |
| HinfI | GANTC | 1 cut(s) | 473 |
| HpaII | CCGG | 1 cut(s) | 597 |
| HphI | GGTGA | 2 cut(s) | 391, 638 |
| Hpy166II | GTNNAC | 1 cut(s) | 506 |
| Hpy188I | TCNGA | 2 cut(s) | 188, 370 |
| Hpy188III | TCNNGA | 2 cut(s) | 134, 592 |
| Hpy8I | GTNNAC | 1 cut(s) | 506 |
| Hpy99I | CGWCG | 2 cut(s) | 82, 154 |
| HpyAV | CCTTC | 4 cut(s) | 76, 157, 487, 623 |
| HpyCH4III | ACNGT | 3 cut(s) | 82, 328, 417 |
| HpyCH4V | TGCA | 5 cut(s) | 4, 203, 346, 431, 566 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 343 |
| Hsp92II | CATG | 4 cut(s) | 207, 350, 431, 480 |
| Kzo9I | GATC | 1 cut(s) | 349 |
| LpnPI | CCDG | 7 cut(s) | 106, 112, 135, 486, 494, 541, 610 |
| Lsp1109I | GCAGC | 1 cut(s) | 112 |
| MaeI | CTAG | 1 cut(s) | 623 |
| MaeIII | GTNAC | 2 cut(s) | 73, 417 |
| MalI | GATC | 1 cut(s) | 351 |
| MboI | GATC | 1 cut(s) | 349 |
| MboII | GAAGA | 1 cut(s) | 480 |
| MfeI | CAATTG | 1 cut(s) | 396 |
| MluCI | AATT | 4 cut(s) | 317, 357, 396, 569 |
| MmeI | TCCRAC | 2 cut(s) | 166, 461 |
| MnlI | CCTC | 2 cut(s) | 6, 364 |
| Mph1103I | ATGCAT | 3 cut(s) | 205, 348, 433 |
| MroXI | GAANNNNTTC | 1 cut(s) | 472 |
| MslI | CAYNNNNRTG | 1 cut(s) | 426 |
| MspA1I | CMGCKG | 1 cut(s) | 125 |
| MspI | CCGG | 1 cut(s) | 597 |
| MspR9I | CCNGG | 1 cut(s) | 598 |
| MunI | CAATTG | 1 cut(s) | 396 |
| MvnI | CGCG | 1 cut(s) | 612 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 343 |
| NciI | CCSGG | 1 cut(s) | 598 |
| NdeI | CATATG | 1 cut(s) | 144 |
| NdeII | GATC | 1 cut(s) | 349 |
| NlaIII | CATG | 4 cut(s) | 207, 350, 431, 480 |
| NmeAIII | GCCGAG | 1 cut(s) | 414 |
| NmuCI | GTSAC | 1 cut(s) | 73 |
| NsiI | ATGCAT | 3 cut(s) | 205, 348, 433 |
| PdmI | GAANNNNTTC | 1 cut(s) | 472 |
| PfeI | GAWTC | 1 cut(s) | 473 |
| PflFI | GACNNNGTC | 1 cut(s) | 605 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 359 |
| PkrI | GCNGC | 1 cut(s) | 127 |
| PspPI | GGNCC | 1 cut(s) | 607 |
| PsyI | GACNNNGTC | 1 cut(s) | 605 |
| PvuII | CAGCTG | 1 cut(s) | 125 |
| RsaI | GTAC | 2 cut(s) | 270, 288 |
| RsaNI | GTAC | 2 cut(s) | 269, 287 |
| RseI | CAYNNNNRTG | 1 cut(s) | 426 |
| SatI | GCNGC | 1 cut(s) | 126 |
| Sau3AI | GATC | 1 cut(s) | 349 |
| Sau96I | GGNCC | 1 cut(s) | 607 |
| ScrFI | CCNGG | 1 cut(s) | 598 |
| SetI | ASST | 7 cut(s) | 17, 58, 127, 141, 196, 505, 628 |
| SinI | GGWCC | 1 cut(s) | 607 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 426 |
| Sse9I | AATT | 4 cut(s) | 317, 357, 396, 569 |
| SsiI | CCGC | 4 cut(s) | 282, 404, 465, 610 |
| SspMI | CTAG | 1 cut(s) | 623 |
| StyD4I | CCNGG | 1 cut(s) | 596 |
| TaaI | ACNGT | 3 cut(s) | 82, 328, 417 |
| TaqI | TCGA | 2 cut(s) | 133, 645 |
| TasI | AATT | 4 cut(s) | 317, 357, 396, 569 |
| TatI | WGTACW | 1 cut(s) | 286 |
| TfiI | GAWTC | 1 cut(s) | 473 |
| TscAI | CASTG | 1 cut(s) | 100 |
| TseFI | GTSAC | 1 cut(s) | 73 |
| TseI | GCWGC | 1 cut(s) | 125 |
| Tsp45I | GTSAC | 1 cut(s) | 73 |
| TspDTI | ATGAA | 5 cut(s) | 119, 131, 249, 446, 465 |
| TspGWI | ACGGA | 1 cut(s) | 167 |
| TspRI | CASTG | 1 cut(s) | 100 |
| Tth111I | GACNNNGTC | 1 cut(s) | 605 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 359 |
| VpaK11BI | GGWCC | 1 cut(s) | 607 |
| XapI | RAATTY | 2 cut(s) | 317, 569 |
| XmnI | GAANNNNTTC | 1 cut(s) | 472 |
| XspI | CTAG | 1 cut(s) | 623 |
| Zsp2I | ATGCAT | 3 cut(s) | 205, 348, 433 |