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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 180 |
| AccII | CGCG | 2 cut(s) | 556, 732 |
| AciI | CCGC | 7 cut(s) | 178, 231, 241, 511, 529, 624, 680 |
| AclWI | GGATC | 2 cut(s) | 332, 403 |
| AcoI | YGGCCR | 1 cut(s) | 526 |
| AcsI | RAATTY | 1 cut(s) | 282 |
| AcuI | CTGAAG | 1 cut(s) | 32 |
| AfaI | GTAC | 4 cut(s) | 118, 371, 539, 575 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 169 |
| AflIII | ACRYGT | 1 cut(s) | 62 |
| AgsI | TTSAA | 5 cut(s) | 103, 148, 687, 761, 769 |
| AluBI | AGCT | 3 cut(s) | 153, 565, 597 |
| AluI | AGCT | 3 cut(s) | 153, 565, 597 |
| Alw21I | GWGCWC | 2 cut(s) | 155, 599 |
| Alw26I | GTCTC | 1 cut(s) | 11 |
| AlwI | GGATC | 2 cut(s) | 332, 403 |
| Ama87I | CYCGRG | 1 cut(s) | 167 |
| AoxI | GGCC | 1 cut(s) | 526 |
| ApoI | RAATTY | 1 cut(s) | 282 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 392, 424 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 87, 546, 611 |
| AspLEI | GCGC | 2 cut(s) | 583, 734 |
| AspS9I | GGNCC | 2 cut(s) | 423, 677 |
| AsuHPI | GGTGA | 3 cut(s) | 152, 230, 464 |
| AsuII | TTCGAA | 1 cut(s) | 91 |
| AvaI | CYCGRG | 1 cut(s) | 167 |
| AvaII | GGWCC | 2 cut(s) | 423, 677 |
| BanII | GRGCYC | 2 cut(s) | 155, 599 |
| BauI | CACGAG | 1 cut(s) | 712 |
| Bbv12I | GWGCWC | 2 cut(s) | 155, 599 |
| BccI | CCATC | 3 cut(s) | 38, 457, 667 |
| BceAI | ACGGC | 2 cut(s) | 541, 704 |
| BciVI | GTATCC | 1 cut(s) | 242 |
| BclI | TGATCA | 1 cut(s) | 27 |
| BcoDI | GTCTC | 1 cut(s) | 11 |
| BfaI | CTAG | 1 cut(s) | 566 |
| BfuI | GTATCC | 1 cut(s) | 242 |
| BisI | GCNGC | 2 cut(s) | 511, 529 |
| BlsI | GCNGC | 2 cut(s) | 512, 530 |
| Bme18I | GGWCC | 2 cut(s) | 423, 677 |
| BmeT110I | CYCGRG | 1 cut(s) | 167 |
| BmgT120I | GGNCC | 2 cut(s) | 423, 677 |
| BmiI | GGNNCC | 2 cut(s) | 476, 678 |
| BmsI | GCATC | 2 cut(s) | 294, 683 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 536, 568 |
| Bpu14I | TTCGAA | 1 cut(s) | 91 |
| BsaAI | YACGTR | 1 cut(s) | 484 |
| BsaJI | CCNNGG | 3 cut(s) | 75, 168, 290 |
| BsaWI | WCCGGW | 2 cut(s) | 245, 358 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 164, 194 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 169 |
| Bse118I | RCCGGY | 2 cut(s) | 274, 583 |
| Bse3DI | GCAATG | 2 cut(s) | 269, 454 |
| BseDI | CCNNGG | 3 cut(s) | 75, 168, 290 |
| BseGI | GGATG | 4 cut(s) | 71, 468, 678, 698 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 169 |
| BseMI | GCAATG | 2 cut(s) | 269, 454 |
| BseX3I | CGGCCG | 1 cut(s) | 526 |
| Bsh1236I | CGCG | 2 cut(s) | 556, 732 |
| Bsh1285I | CGRYCG | 2 cut(s) | 333, 529 |
| BshFI | GGCC | 1 cut(s) | 528 |
| BsiEI | CGRYCG | 2 cut(s) | 333, 529 |
| BsiHKAI | GWGCWC | 2 cut(s) | 155, 599 |
| BsiHKCI | CYCGRG | 1 cut(s) | 167 |
| BsiSI | CCGG | 4 cut(s) | 246, 275, 359, 584 |
| BsiWI | CGTACG | 1 cut(s) | 573 |
| BslFI | GGGAC | 1 cut(s) | 690 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 169 |
| BsmAI | GTCTC | 1 cut(s) | 11 |
| BsmFI | GGGAC | 1 cut(s) | 690 |
| BsnI | GGCC | 1 cut(s) | 528 |
| BsoBI | CYCGRG | 1 cut(s) | 167 |
| Bsp119I | TTCGAA | 1 cut(s) | 91 |
| Bsp1286I | GDGCHC | 2 cut(s) | 155, 599 |
| Bsp1407I | TGTACA | 1 cut(s) | 116 |
| Bsp143I | GATC | 4 cut(s) | 27, 330, 337, 395 |
| Bsp19I | CCATGG | 1 cut(s) | 75 |
| BspACI | CCGC | 7 cut(s) | 178, 231, 241, 511, 529, 624, 680 |
| BspANI | GGCC | 1 cut(s) | 528 |
| BspFNI | CGCG | 2 cut(s) | 556, 732 |
| BspLI | GGNNCC | 2 cut(s) | 476, 678 |
| BspPI | GGATC | 2 cut(s) | 332, 403 |
| BspQI | GCTCTTC | 1 cut(s) | 143 |
| BspT104I | TTCGAA | 1 cut(s) | 91 |
| BsrBI | CCGCTC | 1 cut(s) | 180 |
| BsrDI | GCAATG | 2 cut(s) | 269, 454 |
| BsrFI | RCCGGY | 2 cut(s) | 274, 583 |
| BsrGI | TGTACA | 1 cut(s) | 116 |
| BssAI | RCCGGY | 2 cut(s) | 274, 583 |
| BssECI | CCNNGG | 3 cut(s) | 75, 168, 290 |
| BssMI | GATC | 4 cut(s) | 27, 330, 337, 395 |
| BssSI | CACGAG | 1 cut(s) | 712 |
| BssT1I | CCWWGG | 2 cut(s) | 75, 290 |
| Bst2BI | CACGAG | 1 cut(s) | 712 |
| Bst4CI | ACNGT | 5 cut(s) | 196, 416, 440, 578, 633 |
| Bst6I | CTCTTC | 3 cut(s) | 143, 195, 537 |
| BstAUI | TGTACA | 1 cut(s) | 116 |
| BstBAI | YACGTR | 1 cut(s) | 484 |
| BstBI | TTCGAA | 1 cut(s) | 91 |
| BstC8I | GCNNGC | 4 cut(s) | 276, 508, 585, 730 |
| BstDSI | CCRYGG | 1 cut(s) | 75 |
| BstF5I | GGATG | 4 cut(s) | 71, 468, 678, 698 |
| BstFNI | CGCG | 2 cut(s) | 556, 732 |
| BstHHI | GCGC | 2 cut(s) | 583, 734 |
| BstKTI | GATC | 4 cut(s) | 30, 333, 340, 398 |
| BstMAI | GTCTC | 1 cut(s) | 11 |
| BstMBI | GATC | 4 cut(s) | 27, 330, 337, 395 |
| BstMCI | CGRYCG | 2 cut(s) | 333, 529 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 562, 578, 725 |
| BstNSI | RCATGY | 1 cut(s) | 24 |
| BstSNI | TACGTA | 1 cut(s) | 484 |
| BstUI | CGCG | 2 cut(s) | 556, 732 |
| BstZI | CGGCCG | 1 cut(s) | 526 |
| BsuI | GTATCC | 1 cut(s) | 242 |
| BsuRI | GGCC | 1 cut(s) | 528 |
| BtgI | CCRYGG | 1 cut(s) | 75 |
| BtgZI | GCGATG | 2 cut(s) | 20, 487 |
| BtsCI | GGATG | 4 cut(s) | 71, 468, 678, 698 |
| BtsI | GCAGTG | 1 cut(s) | 223 |
| BtsIMutI | CAGTG | 1 cut(s) | 223 |
| Cac8I | GCNNGC | 4 cut(s) | 276, 508, 585, 730 |
| CfoI | GCGC | 2 cut(s) | 583, 734 |
| Cfr10I | RCCGGY | 2 cut(s) | 274, 583 |
| Cfr13I | GGNCC | 2 cut(s) | 423, 677 |
| CseI | GACGC | 1 cut(s) | 120 |
| Csp6I | GTAC | 4 cut(s) | 117, 370, 538, 574 |
| CviAII | CATG | 6 cut(s) | 21, 25, 31, 76, 107, 310 |
| CviJI | RGCY | 5 cut(s) | 153, 166, 528, 565, 597 |
| CviKI_1 | RGCY | 5 cut(s) | 153, 166, 528, 565, 597 |
| CviQI | GTAC | 4 cut(s) | 117, 370, 538, 574 |
| DpnI | GATC | 4 cut(s) | 29, 332, 339, 397 |
| DpnII | GATC | 4 cut(s) | 27, 330, 337, 395 |
| EaeI | YGGCCR | 1 cut(s) | 526 |
| EagI | CGGCCG | 1 cut(s) | 526 |
| Eam1104I | CTCTTC | 3 cut(s) | 143, 195, 537 |
| EarI | CTCTTC | 3 cut(s) | 143, 195, 537 |
| Ecl136II | GAGCTC | 2 cut(s) | 153, 597 |
| EclXI | CGGCCG | 1 cut(s) | 526 |
| Eco105I | TACGTA | 1 cut(s) | 484 |
| Eco130I | CCWWGG | 2 cut(s) | 75, 290 |
| Eco24I | GRGCYC | 2 cut(s) | 155, 599 |
| Eco47I | GGWCC | 2 cut(s) | 423, 677 |
| Eco52I | CGGCCG | 1 cut(s) | 526 |
| Eco53kI | GAGCTC | 2 cut(s) | 153, 597 |
| Eco57I | CTGAAG | 1 cut(s) | 32 |
| Eco88I | CYCGRG | 1 cut(s) | 167 |
| EcoICRI | GAGCTC | 2 cut(s) | 153, 597 |
| EcoT14I | CCWWGG | 2 cut(s) | 75, 290 |
| EcoT22I | ATGCAT | 1 cut(s) | 26 |
| EcoT38I | GRGCYC | 2 cut(s) | 155, 599 |
| ErhI | CCWWGG | 2 cut(s) | 75, 290 |
| FaeI | CATG | 6 cut(s) | 24, 28, 34, 79, 110, 313 |
| FaiI | YATR | 8 cut(s) | 22, 26, 32, 55, 77, 108, 311, 494 |
| FaqI | GGGAC | 1 cut(s) | 690 |
| FatI | CATG | 6 cut(s) | 20, 24, 30, 75, 106, 309 |
| FbaI | TGATCA | 1 cut(s) | 27 |
| Fnu4HI | GCNGC | 2 cut(s) | 511, 529 |
| FokI | GGATG | 4 cut(s) | 58, 475, 685, 705 |
| FriOI | GRGCYC | 2 cut(s) | 155, 599 |
| Fsp4HI | GCNGC | 2 cut(s) | 511, 529 |
| FspBI | CTAG | 1 cut(s) | 566 |
| GlaI | GCGC | 2 cut(s) | 582, 733 |
| GluI | GCNGC | 2 cut(s) | 511, 529 |
| HaeIII | GGCC | 1 cut(s) | 528 |
| HapII | CCGG | 4 cut(s) | 246, 275, 359, 584 |
| HgaI | GACGC | 1 cut(s) | 120 |
| HhaI | GCGC | 2 cut(s) | 583, 734 |
| Hin1II | CATG | 6 cut(s) | 24, 28, 34, 79, 110, 313 |
| Hin6I | GCGC | 2 cut(s) | 581, 732 |
| HinP1I | GCGC | 2 cut(s) | 581, 732 |
| HincII | GTYRAC | 4 cut(s) | 36, 436, 523, 658 |
| HindII | GTYRAC | 4 cut(s) | 36, 436, 523, 658 |
| HinfI | GANTC | 3 cut(s) | 83, 708, 784 |
| HpaI | GTTAAC | 3 cut(s) | 36, 436, 523 |
| HpaII | CCGG | 4 cut(s) | 246, 275, 359, 584 |
| HphI | GGTGA | 3 cut(s) | 152, 230, 464 |
| Hpy166II | GTNNAC | 9 cut(s) | 36, 160, 238, 264, 436, 523, 629, 636, 658 |
| Hpy188I | TCNGA | 1 cut(s) | 400 |
| Hpy188III | TCNNGA | 2 cut(s) | 670, 775 |
| Hpy8I | GTNNAC | 9 cut(s) | 36, 160, 238, 264, 436, 523, 629, 636, 658 |
| Hpy99I | CGWCG | 1 cut(s) | 380 |
| HpyAV | CCTTC | 5 cut(s) | 7, 98, 307, 449, 508 |
| HpyCH4III | ACNGT | 5 cut(s) | 196, 416, 440, 578, 633 |
| HpyCH4IV | ACGT | 3 cut(s) | 64, 363, 483 |
| HpyCH4V | TGCA | 3 cut(s) | 24, 307, 728 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 562, 578, 725 |
| HpySE526I | ACGT | 3 cut(s) | 64, 363, 483 |
| Hsp92II | CATG | 6 cut(s) | 24, 28, 34, 79, 110, 313 |
| HspAI | GCGC | 2 cut(s) | 581, 732 |
| KroI | GCCGGC | 2 cut(s) | 274, 583 |
| KroNI | GCCGGC | 2 cut(s) | 276, 585 |
| Ksp22I | TGATCA | 1 cut(s) | 27 |
| KspAI | GTTAAC | 3 cut(s) | 36, 436, 523 |
| Kzo9I | GATC | 4 cut(s) | 27, 330, 337, 395 |
| LguI | GCTCTTC | 1 cut(s) | 143 |
| LmnI | GCTCC | 3 cut(s) | 185, 233, 602 |
| LpnPI | CCDG | 6 cut(s) | 176, 259, 288, 372, 597, 655 |
| LweI | GCATC | 2 cut(s) | 294, 683 |
| MaeI | CTAG | 1 cut(s) | 566 |
| MaeII | ACGT | 3 cut(s) | 64, 363, 483 |
| MaeIII | GTNAC | 1 cut(s) | 557 |
| MalI | GATC | 4 cut(s) | 29, 332, 339, 397 |
| MbiI | CCGCTC | 1 cut(s) | 180 |
| MboI | GATC | 4 cut(s) | 27, 330, 337, 395 |
| MboII | GAAGA | 3 cut(s) | 160, 212, 554 |
| MhlI | GDGCHC | 2 cut(s) | 155, 599 |
| MluCI | AATT | 3 cut(s) | 282, 381, 611 |
| MmeI | TCCRAC | 1 cut(s) | 682 |
| MnlI | CCTC | 5 cut(s) | 73, 163, 196, 538, 773 |
| Mph1103I | ATGCAT | 1 cut(s) | 26 |
| MroNI | GCCGGC | 2 cut(s) | 274, 583 |
| MroXI | GAANNNNTTC | 3 cut(s) | 87, 546, 611 |
| MseI | TTAA | 3 cut(s) | 35, 435, 522 |
| MslI | CAYNNNNRTG | 1 cut(s) | 29 |
| MspA1I | CMGCKG | 1 cut(s) | 233 |
| MspI | CCGG | 4 cut(s) | 246, 275, 359, 584 |
| MvnI | CGCG | 2 cut(s) | 556, 732 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 562, 578, 725 |
| NaeI | GCCGGC | 2 cut(s) | 276, 585 |
| NcoI | CCATGG | 1 cut(s) | 75 |
| NdeII | GATC | 4 cut(s) | 27, 330, 337, 395 |
| NgoMIV | GCCGGC | 2 cut(s) | 274, 583 |
| NlaIII | CATG | 6 cut(s) | 24, 28, 34, 79, 110, 313 |
| NlaIV | GGNNCC | 2 cut(s) | 476, 678 |
| NmuCI | GTSAC | 1 cut(s) | 557 |
| NsiI | ATGCAT | 1 cut(s) | 26 |
| NspI | RCATGY | 1 cut(s) | 24 |
| NspV | TTCGAA | 1 cut(s) | 91 |
| PciSI | GCTCTTC | 1 cut(s) | 143 |
| PdiI | GCCGGC | 2 cut(s) | 276, 585 |
| PdmI | GAANNNNTTC | 3 cut(s) | 87, 546, 611 |
| PfeI | GAWTC | 3 cut(s) | 83, 708, 784 |
| Pfl23II | CGTACG | 1 cut(s) | 573 |
| PkrI | GCNGC | 2 cut(s) | 512, 530 |
| Ple19I | CGATCG | 1 cut(s) | 333 |
| Ppu21I | YACGTR | 1 cut(s) | 484 |
| Psp124BI | GAGCTC | 2 cut(s) | 155, 599 |
| PspLI | CGTACG | 1 cut(s) | 573 |
| PspN4I | GGNNCC | 2 cut(s) | 476, 678 |
| PspPI | GGNCC | 2 cut(s) | 423, 677 |
| PvuI | CGATCG | 1 cut(s) | 333 |
| RsaI | GTAC | 4 cut(s) | 118, 371, 539, 575 |
| RsaNI | GTAC | 4 cut(s) | 117, 370, 538, 574 |
| RseI | CAYNNNNRTG | 1 cut(s) | 29 |
| SacI | GAGCTC | 2 cut(s) | 155, 599 |
| SapI | GCTCTTC | 1 cut(s) | 143 |
| SaqAI | TTAA | 3 cut(s) | 35, 435, 522 |
| SatI | GCNGC | 2 cut(s) | 511, 529 |
| Sau3AI | GATC | 4 cut(s) | 27, 330, 337, 395 |
| Sau96I | GGNCC | 2 cut(s) | 423, 677 |
| SduI | GDGCHC | 2 cut(s) | 155, 599 |
| SfaNI | GCATC | 2 cut(s) | 294, 683 |
| SfuI | TTCGAA | 1 cut(s) | 91 |
| SinI | GGWCC | 2 cut(s) | 423, 677 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 29 |
| SnaBI | TACGTA | 1 cut(s) | 484 |
| Sse9I | AATT | 3 cut(s) | 282, 381, 611 |
| SsiI | CCGC | 7 cut(s) | 178, 231, 241, 511, 529, 624, 680 |
| SspI | AATATT | 1 cut(s) | 189 |
| SspMI | CTAG | 1 cut(s) | 566 |
| SstI | GAGCTC | 2 cut(s) | 155, 599 |
| StyI | CCWWGG | 2 cut(s) | 75, 290 |
| TaaI | ACNGT | 5 cut(s) | 196, 416, 440, 578, 633 |
| TaiI | ACGT | 3 cut(s) | 67, 366, 486 |
| TaqI | TCGA | 5 cut(s) | 91, 198, 378, 516, 741 |
| TasI | AATT | 3 cut(s) | 282, 381, 611 |
| TatI | WGTACW | 1 cut(s) | 116 |
| TauI | GCSGC | 2 cut(s) | 513, 531 |
| TfiI | GAWTC | 3 cut(s) | 83, 708, 784 |
| Tru1I | TTAA | 3 cut(s) | 35, 435, 522 |
| Tru9I | TTAA | 3 cut(s) | 35, 435, 522 |
| TscAI | CASTG | 1 cut(s) | 230 |
| TseFI | GTSAC | 1 cut(s) | 557 |
| Tsp45I | GTSAC | 1 cut(s) | 557 |
| TspDTI | ATGAA | 3 cut(s) | 57, 326, 490 |
| TspGWI | ACGGA | 7 cut(s) | 330, 357, 366, 475, 589, 605, 705 |
| TspRI | CASTG | 1 cut(s) | 230 |
| VpaK11BI | GGWCC | 2 cut(s) | 423, 677 |
| XapI | RAATTY | 1 cut(s) | 282 |
| XceI | RCATGY | 1 cut(s) | 24 |
| XmnI | GAANNNNTTC | 3 cut(s) | 87, 546, 611 |
| XspI | CTAG | 1 cut(s) | 566 |
| Zsp2I | ATGCAT | 1 cut(s) | 26 |