Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0000124

Physical Location & Seq

Genomic Coordinates Reverse (-)

65567547 .. 65569462

Gene Structure 1916 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG498700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1329 bp

ATGGCCGATTTCAGCAGAATGTTTCACCCAAGCTTCATCGTCGTTGTGCGGTACCCGGGAAAGAACGTCGAAGATACGAAAATTCCACCGCGCTTTAGTAGGGAGCACTTGAGGGACGATGACATTGACGTCGCTCGACTGGTCTTGGATGGATGCAGGAAGTGTTCATATTATGTGAAGGTTACCCCACAAGGGCAGGACCATTGGCTGGGTTCTGGTTGGGGGAGCTTTCTCGACAATGTCCGACACGGTGAGGGTCGAATGGTGCTGCTACTCCAGTACAAAGGCGGAATGAAGTTCGTCGTGCGCCGGTATGATGTGAACGGGGCGTTGATGTACGCTTCTCCTCGACCCAGATTCGGTCGCCCGCCTCCCACATCACCCACTATTAGGGGGGTATTCGATGGCTTCGTATCTGACATTTGGGATCAGACGGTCACTTTGCCTGTCGTACCAAGAGGTGTCGTCCATGATAGGCTGATTGCGGACGGAGCCCCTGCTGTTTGTGACTTCCGATGGGAGACGGATCCTCCAGTATTCCAGCAGGTGGAGATCACGGGAGGACATAGGAAGCTAAGATTCGTAAATGAATGGGAACGCTTTCACTTGGAGAATCGCTTGGGACAACGTCGGTGCTGTGTGTTCACCTACCTGGGAAATCTGCGGTTCTCGGTTCTTGTGTTCGACACTGTTCGAGGAACCCTTTGCACGACGCCGCTGCAATTCACCCCTGCTCCAGACGCGGCTCCACATACCAATGGTATTGACCAAGAAGAGGGGATTCTGGACCCTGAGGAGGACCATAGGGATGAGGATGAGGCACGGGTGGAAGATATGGAGCAAGGAATCAATGAAGATGCAGTTGAAGAAGGCGACCACGAACCTCCGGAGGAAAGGGTGCCAGATTCATGGCGTAGAGGGAGATCCTGCCAATGCACAATCCAGAGATGTCACGGTGGTTACATGGGTTACTTTCCAAACTGCCCCGACAGTATGCGCCATTTGATTCCATTCAAAAGTCGAATATGGATGAAATCGTTTATGAATGAGTATCTACCAGCCAAGTTTGCTCAGTCCACATTTCCCAGAGGAACACCAGTTCAGATAAAGGTGCAGAAATCCGACGGACGTCTGTGGAGAATGAAAGCCGTTCCATCCAATACCACTCACTACTTAAGTAAAGGGTACACCAAATTTAGGGAGGACCTCAGTCTGCCTATAGGGTCTGCAATCGAGCTCCATGTGGTTGACGGCAACAAATTGTTCAATTCCAGTTTAATTGCTGCTTTGGGTATTGATATTAGTGGGGGCAACATGTTTGCTCATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016553 GO:0016554 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR

Protein Analysis

442

Amino Acids

50.39

Weight (kDa)

6.58

Isoelectric Point (pI)

45.53

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000124)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g10992 FvH4_2g25150 FvH4_2g27910 FvH4_2g27931 FvH4_4g09443 FvH4_4g09490 FvH4_4g15990 FvH4_4g15991 FvH4_6g07180 FvH4_6g40320 FvH4_7g10222 FvH4_7g10251
rosa_chinensis	RchiOBHm_Chr2g0155611
rosa_laevigata	RLG00000009253 RLG00000009254 RLG00000011848 RLG00000017301 RLG00000017302 RLG00000034909
rosa_multiflora	Rmu_co8063658.1_g000001 Rmu_co8240443.1_g000001 Rmu_co8264451.1_g000001 Rmu_co8381937.1_g000001 Rmu_co8419903.1_g000001 Rmu_co8513405.1_g000002 Rmu_co8522915.1_g000001 Rmu_co8522915.1_g000004 Rmu_sc0000279.1_g000024 Rmu_sc0000279.1_g000048 Rmu_sc0000642.1_g000017 Rmu_sc0002045.1_g000015 Rmu_sc0002045.1_g000018 Rmu_sc0002045.1_g000023 Rmu_sc0002045.1_g000028 Rmu_sc0003047.1_g000008 Rmu_sc0003179.1_g000019 Rmu_sc0003179.1_g000020 Rmu_sc0003179.1_g000022 Rmu_sc0003179.1_g000023 Rmu_sc0003422.1_g000011 Rmu_sc0004999.1_g000014 Rmu_sc0005712.1_g000018 Rmu_sc0005712.1_g000023 Rmu_sc0006198.1_g000019 Rmu_sc0006373.1_g000005 Rmu_sc0006514.1_g000028 Rmu_sc0006514.1_g000031 Rmu_sc0007367.1_g000010 Rmu_sc0011475.1_g000002 Rmu_sc0025304.1_g000001 Rmu_ssc0000161.1_g000030 Rmu_ssc0000161.1_g000032 Rmu_ssc0000387.1_g000018
rosa_roxburghii	Rroxscaffold_1G00031090 Rroxscaffold_1G00032770 Rroxscaffold_1G00068950 Rroxscaffold_1G00069000 Rroxscaffold_1G00069010 Rroxscaffold_2G00129060 Rroxscaffold_2G00129100 Rroxscaffold_4G00309310 Rroxscaffold_4G00309320 Rroxscaffold_5G00350620 Rroxscaffold_5G00350630 Rroxscaffold_7G00162650 Rroxscaffold_7G00162660 Rroxscaffold_7G00162710
rosa_rugosa	Rorug02G0564700 Rorug02G0564700 Rorug03G0343100 Rorug04G0189700 Rorug05G0102800 Rorug05G0102900 Rorug05G0103000 Rorug05G0106500 Rorug05G0106600 Rorug05G0106700 Rorug05G0252800 Rorug07G0182100 Rorug07G0283500 Rorug07G0283600
rosa_samantha	Rh1AG004000 Rh1AG004100 Rh1AG004200 Rh1AG004400 Rh1AG004500 Rh1AG004600 Rh1AG004800 Rh1AG004900 Rh1AG005300 Rh1AG007000 Rh1AG115000 Rh1CG049400 Rh1CG055400 Rh1CG111000 Rh1DG053600 Rh1DG053700 Rh1DG059300 Rh1DG119700 Rh1DG177100 Rh1DG177200 Rh2AG353800 Rh2AG354000 Rh2AG354100 Rh2AG354300 Rh2AG354400 Rh2AG354500 Rh2AG354600 Rh2AG354700 Rh2AG642300 Rh2AG642400 Rh2AG642500 Rh2BG336500 Rh2BG336600 Rh2BG336700 Rh2BG336800 Rh2BG336900 Rh2CG299900 Rh2CG300000 Rh2CG300100 Rh2DG337000 Rh2DG337100 Rh3AG246600 Rh3BG121900 Rh3BG122300 Rh3BG122600 Rh3BG122700 Rh3DG304800 Rh3DG304900 Rh4AG148800 Rh4AG249000 Rh4AG249100 Rh4AG249200 Rh4BG182700 Rh4BG182800 Rh4BG182900 Rh4BG254400 Rh4BG254500 Rh4BG254600 Rh4CG155500 Rh4CG155700 Rh4DG057900 Rh4DG058000 Rh4DG058100 Rh4DG058200 Rh4DG129100 Rh5AG364500 Rh5AG364600 Rh5AG364800 Rh5AG365300 Rh5CG363700 Rh5CG497600 Rh5DG239500 Rh5DG239600 Rh6AG173500 Rh6AG175400 Rh6BG075900 Rh6BG076300 Rh6BG076400 Rh6BG076500 Rh6BG076600 Rh6CG151000 Rh6CG151200 Rh6CG151300 Rh6CG151400 Rh6CG205200 Rh6CG205300 Rh6CG419700 Rh6CG419900 Rh6CG420100 Rh6DG498700 Rh6DG498800 Rh7AG329000 Rh7AG329100 Rh7AG329300 Rh7AG329400 Rh7AG353000 Rh7AG353100 Rh7AG353300 Rh7AG353400 Rh7AG353500 Rh7CG346400 Rh7CG346500 Rh7CG346700 Rh7CG370800 Rh7CG370900 Rh7CG371000 Rh7CG371100 Rh7DG325000 Rh7DG325100 Rh7DG325200 Rh7DG325300 Rh7DG353100 Rh7DG353200 Rh7DG353300 Rh7DG363500 Rh7DG364000
rosa_wichuraiana	Rw0G002290 Rw0G012780 Rw1G000260 Rw1G000270 Rw1G010400 Rw1G010410 Rw1G010420 Rw1G010430 Rw1G010440 Rw2G003210 Rw2G003220 Rw4G010970 Rw5G048520 Rw6G013320 Rw6G013470 Rw6G014940 Rw6G016570 Rw6G016590 Rw6G016600 Rw6G016610 Rw6G016620 Rw6G035450 Rw7G027760 Rw7G030460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	535
AasI	GACNNNNNNGTC	1 cut(s)	128
AatII	GACGTC	2 cut(s)	132, 1132
Acc36I	ACCTGC	1 cut(s)	535
Acc65I	GGTACC	1 cut(s)	51
AccB1I	GGYRCC	2 cut(s)	51, 898
AccB7I	CCANNNNNTGG	2 cut(s)	208, 547
AccII	CGCG	2 cut(s)	91, 743
AccIII	TCCGGA	1 cut(s)	886
AciI	CCGC	8 cut(s)	49, 89, 288, 368, 485, 664, 716, 743
AclWI	GGATC	4 cut(s)	435, 521, 534, 918
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	2 cut(s)	81, 1193
AcyI	GRCGYC	3 cut(s)	129, 713, 1129
AfaI	GTAC	5 cut(s)	53, 281, 338, 453, 1187
AfiI	CCNNNNNNNGG	8 cut(s)	192, 208, 359, 390, 547, 775, 796, 1197
AflII	CTTAAG	1 cut(s)	1174
AflIII	ACRYGT	1 cut(s)	1314
AgsI	TTSAA	3 cut(s)	866, 1015, 1267
AjnI	CCWGG	1 cut(s)	651
AloI	GAACNNNNNNTCC	2 cut(s)	1083, 1115
AluBI	AGCT	4 cut(s)	33, 228, 574, 1237
AluI	AGCT	4 cut(s)	33, 228, 574, 1237
Alw21I	GWGCWC	2 cut(s)	108, 1239
Alw26I	GTCTC	1 cut(s)	515
AlwI	GGATC	4 cut(s)	435, 521, 534, 918
Ama87I	CYCGRG	1 cut(s)	55
Aor13HI	TCCGGA	1 cut(s)	886
AoxI	GGCC	1 cut(s)	3
ApeKI	GCWGC	3 cut(s)	268, 718, 1283
ApoI	RAATTY	2 cut(s)	81, 1193
ArsI	GACNNNNNNTTYG	2 cut(s)	424, 456
Asp700I	GAANNNNTTC	1 cut(s)	600
Asp718I	GGTACC	1 cut(s)	51
AspLEI	GCGC	3 cut(s)	93, 309, 999
AspS9I	GGNCC	4 cut(s)	199, 787, 799, 1204
AsuC2I	CCSGG	2 cut(s)	56, 57
AsuHPI	GGTGA	5 cut(s)	17, 263, 372, 637, 718
AvaI	CYCGRG	1 cut(s)	55
AvaII	GGWCC	4 cut(s)	199, 787, 799, 1204
AxyI	CCTNAGG	1 cut(s)	792
BamHI	GGATCC	1 cut(s)	526
BanI	GGYRCC	2 cut(s)	51, 898
BanII	GRGCYC	2 cut(s)	496, 1239
Bbv12I	GWGCWC	2 cut(s)	108, 1239
BbvI	GCAGC	3 cut(s)	255, 705, 1270
BccI	CCATC	4 cut(s)	143, 398, 510, 1162
BceAI	ACGGC	2 cut(s)	1133, 1267
BcgI	CGANNNNNNTGC	2 cut(s)	700, 734
BciT130I	CCWGG	1 cut(s)	653
BcnI	CCSGG	2 cut(s)	56, 57
BcoDI	GTCTC	1 cut(s)	515
BfmI	CTRYAG	1 cut(s)	1218
BfrI	CTTAAG	1 cut(s)	1174
BfuAI	ACCTGC	1 cut(s)	535
BisI	GCNGC	5 cut(s)	269, 716, 719, 744, 1284
BlsI	GCNGC	5 cut(s)	270, 717, 720, 745, 1285
Bme1390I	CCNGG	3 cut(s)	56, 57, 653
Bme18I	GGWCC	4 cut(s)	199, 787, 799, 1204
BmeT110I	CYCGRG	1 cut(s)	55
BmgT120I	GGNCC	4 cut(s)	199, 787, 799, 1204
BmiI	GGNNCC	7 cut(s)	53, 493, 528, 700, 747, 789, 900
BmrFI	CCNGG	3 cut(s)	56, 57, 653
BmsI	GCATC	2 cut(s)	143, 847
BoxI	GACNNNNGTC	2 cut(s)	1128, 1209
BpmI	CTGGAG	3 cut(s)	260, 516, 720
BpuEI	CTTGAG	1 cut(s)	130
BpuMI	CCSGG	2 cut(s)	56, 57
BsaHI	GRCGYC	3 cut(s)	129, 713, 1129
BsaJI	CCNNGG	2 cut(s)	55, 652
BsaWI	WCCGGW	1 cut(s)	886
BsaXI	ACNNNNNCTCC	4 cut(s)	514, 544, 718, 748
Bsc4I	CCNNNNNNNGG	8 cut(s)	192, 208, 359, 390, 547, 775, 796, 1197
Bse118I	RCCGGY	1 cut(s)	309
Bse1I	ACTGG	5 cut(s)	144, 277, 533, 1097, 1272
Bse21I	CCTNAGG	1 cut(s)	792
BseAI	TCCGGA	1 cut(s)	886
BseBI	CCWGG	1 cut(s)	653
BseDI	CCNNGG	2 cut(s)	55, 652
BseGI	GGATG	6 cut(s)	154, 158, 814, 820, 1035, 1154
BseLI	CCNNNNNNNGG	8 cut(s)	192, 208, 359, 390, 547, 775, 796, 1197
BseMII	CTCAG	3 cut(s)	783, 1085, 1222
BseNI	ACTGG	5 cut(s)	144, 277, 533, 1097, 1272
BseRI	GAGGAG	2 cut(s)	336, 809
BseXI	GCAGC	3 cut(s)	255, 705, 1270
BseYI	CCCAGC	1 cut(s)	208
BsgI	GTGCAG	1 cut(s)	1133
Bsh1236I	CGCG	2 cut(s)	91, 743
Bsh1285I	CGRYCG	1 cut(s)	364
BshFI	GGCC	1 cut(s)	5
BshNI	GGYRCC	2 cut(s)	51, 898
BsiEI	CGRYCG	1 cut(s)	364
BsiHKAI	GWGCWC	2 cut(s)	108, 1239
BsiHKCI	CYCGRG	1 cut(s)	55
BsiSI	CCGG	3 cut(s)	56, 310, 887
BslFI	GGGAC	2 cut(s)	128, 636
BslI	CCNNNNNNNGG	8 cut(s)	192, 208, 359, 390, 547, 775, 796, 1197
BsmAI	GTCTC	1 cut(s)	515
BsmBI	CGTCTC	1 cut(s)	515
BsmFI	GGGAC	2 cut(s)	128, 636
BsnI	GGCC	1 cut(s)	5
BsoBI	CYCGRG	1 cut(s)	55
Bsp1286I	GDGCHC	3 cut(s)	108, 496, 1239
Bsp13I	TCCGGA	1 cut(s)	886
Bsp143I	GATC	4 cut(s)	427, 526, 552, 923
BspACI	CCGC	8 cut(s)	49, 89, 288, 368, 485, 664, 716, 743
BspANI	GGCC	1 cut(s)	5
BspCNI	CTCAG	3 cut(s)	784, 1084, 1221
BspEI	TCCGGA	1 cut(s)	886
BspFNI	CGCG	2 cut(s)	91, 743
BspLI	GGNNCC	7 cut(s)	53, 493, 528, 700, 747, 789, 900
BspMI	ACCTGC	1 cut(s)	535
BspPI	GGATC	4 cut(s)	435, 521, 534, 918
BspT107I	GGYRCC	2 cut(s)	51, 898
BspTI	CTTAAG	1 cut(s)	1174
BsrFI	RCCGGY	1 cut(s)	309
BsrI	ACTGG	5 cut(s)	144, 277, 533, 1097, 1272
BssAI	RCCGGY	1 cut(s)	309
BssECI	CCNNGG	2 cut(s)	55, 652
BssMI	GATC	4 cut(s)	427, 526, 552, 923
BssNI	GRCGYC	3 cut(s)	129, 713, 1129
Bst2UI	CCWGG	1 cut(s)	653
Bst4CI	ACNGT	5 cut(s)	251, 436, 691, 956, 992
Bst6I	CTCTTC	1 cut(s)	768
BstACI	GRCGYC	3 cut(s)	129, 713, 1129
BstAFI	CTTAAG	1 cut(s)	1174
BstC8I	GCNNGC	1 cut(s)	368
BstDEI	CTNAG	4 cut(s)	575, 792, 1071, 1208
BstEII	GGTNACC	1 cut(s)	181
BstF5I	GGATG	6 cut(s)	154, 158, 814, 820, 1035, 1154
BstFNI	CGCG	2 cut(s)	91, 743
BstHHI	GCGC	3 cut(s)	93, 309, 999
BstKTI	GATC	4 cut(s)	430, 529, 555, 926
BstMAI	GTCTC	1 cut(s)	515
BstMBI	GATC	4 cut(s)	427, 526, 552, 923
BstMCI	CGRYCG	1 cut(s)	364
BstMWI	GCNNNNNNNGC	3 cut(s)	491, 740, 1067
BstNI	CCWGG	1 cut(s)	653
BstNSI	RCATGY	1 cut(s)	1318
BstPAI	GACNNNNGTC	2 cut(s)	1128, 1209
BstPI	GGTNACC	1 cut(s)	181
BstSCI	CCNGG	3 cut(s)	54, 55, 651
BstSFI	CTRYAG	1 cut(s)	1218
BstUI	CGCG	2 cut(s)	91, 743
BstV1I	GCAGC	3 cut(s)	255, 705, 1270
BstX2I	RGATCY	2 cut(s)	526, 923
BstXI	CCANNNNNNTGG	1 cut(s)	909
BstYI	RGATCY	2 cut(s)	526, 923
Bsu36I	CCTNAGG	1 cut(s)	792
BsuRI	GGCC	1 cut(s)	5
BtsCI	GGATG	6 cut(s)	154, 158, 814, 820, 1035, 1154
BtsIMutI	CAGTG	1 cut(s)	687
BveI	ACCTGC	1 cut(s)	535
Cac8I	GCNNGC	1 cut(s)	368
CfoI	GCGC	3 cut(s)	93, 309, 999
Cfr10I	RCCGGY	1 cut(s)	309
Cfr13I	GGNCC	4 cut(s)	199, 787, 799, 1204
Cfr9I	CCCGGG	1 cut(s)	55
CseI	GACGC	2 cut(s)	721, 749
Csp6I	GTAC	5 cut(s)	52, 280, 337, 452, 1186
CviAII	CATG	5 cut(s)	470, 909, 964, 1241, 1315
CviQI	GTAC	5 cut(s)	52, 280, 337, 452, 1186
DdeI	CTNAG	4 cut(s)	575, 792, 1071, 1208
DpnI	GATC	4 cut(s)	429, 528, 554, 925
DpnII	GATC	4 cut(s)	427, 526, 552, 923
DrdI	GACNNNNNNGTC	1 cut(s)	128
DseDI	GACNNNNNNGTC	1 cut(s)	128
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	1 cut(s)	768
EarI	CTCTTC	1 cut(s)	768
EciI	GGCGGA	1 cut(s)	303
Ecl136II	GAGCTC	1 cut(s)	1237
Eco24I	GRGCYC	2 cut(s)	496, 1239
Eco47I	GGWCC	4 cut(s)	199, 787, 799, 1204
Eco53kI	GAGCTC	1 cut(s)	1237
Eco81I	CCTNAGG	1 cut(s)	792
Eco88I	CYCGRG	1 cut(s)	55
Eco91I	GGTNACC	1 cut(s)	181
EcoICRI	GAGCTC	1 cut(s)	1237
EcoO109I	RGGNCCY	1 cut(s)	1204
EcoO65I	GGTNACC	1 cut(s)	181
EcoRII	CCWGG	1 cut(s)	651
EcoT38I	GRGCYC	2 cut(s)	496, 1239
Esp3I	CGTCTC	1 cut(s)	515
FaeI	CATG	5 cut(s)	473, 912, 967, 1244, 1318
FaqI	GGGAC	2 cut(s)	128, 636
FatI	CATG	5 cut(s)	469, 908, 963, 1240, 1314
FauI	CCCGC	1 cut(s)	375
Fnu4HI	GCNGC	5 cut(s)	269, 716, 719, 744, 1284
FokI	GGATG	6 cut(s)	161, 165, 821, 827, 1042, 1141
FriOI	GRGCYC	2 cut(s)	496, 1239
Fsp4HI	GCNGC	5 cut(s)	269, 716, 719, 744, 1284
GlaI	GCGC	3 cut(s)	92, 308, 998
GluI	GCNGC	5 cut(s)	269, 716, 719, 744, 1284
GsaI	CCCAGC	1 cut(s)	212
GsuI	CTGGAG	3 cut(s)	260, 516, 720
HaeIII	GGCC	1 cut(s)	5
HapII	CCGG	3 cut(s)	56, 310, 887
HgaI	GACGC	2 cut(s)	721, 749
HhaI	GCGC	3 cut(s)	93, 309, 999
Hin1I	GRCGYC	3 cut(s)	129, 713, 1129
Hin1II	CATG	5 cut(s)	473, 912, 967, 1244, 1318
Hin6I	GCGC	3 cut(s)	91, 307, 997
HinP1I	GCGC	3 cut(s)	91, 307, 997
HincII	GTYRAC	1 cut(s)	1249
HindII	GTYRAC	1 cut(s)	1249
HindIII	AAGCTT	1 cut(s)	31
HinfI	GANTC	7 cut(s)	357, 579, 613, 781, 846, 905, 1006
HpaII	CCGG	3 cut(s)	56, 310, 887
HphI	GGTGA	5 cut(s)	17, 263, 372, 637, 718
Hpy166II	GTNNAC	5 cut(s)	322, 645, 1077, 1188, 1249
Hpy188I	TCNGA	6 cut(s)	245, 418, 432, 515, 1104, 1123
Hpy188III	TCNNGA	5 cut(s)	233, 737, 785, 887, 943
Hpy8I	GTNNAC	5 cut(s)	322, 645, 1077, 1188, 1249
Hpy99I	CGWCG	7 cut(s)	44, 71, 134, 305, 633, 715, 1127
HpyAV	CCTTC	2 cut(s)	172, 863
HpyCH4III	ACNGT	5 cut(s)	251, 436, 691, 956, 992
HpyCH4IV	ACGT	4 cut(s)	66, 129, 628, 1129
HpyCH4V	TGCA	7 cut(s)	156, 708, 721, 860, 936, 1114, 1229
HpyF10VI	GCNNNNNNNGC	3 cut(s)	491, 740, 1067
HpyF3I	CTNAG	4 cut(s)	575, 792, 1071, 1208
HpySE526I	ACGT	4 cut(s)	66, 129, 628, 1129
Hsp92I	GRCGYC	3 cut(s)	129, 713, 1129
Hsp92II	CATG	5 cut(s)	473, 912, 967, 1244, 1318
HspAI	GCGC	3 cut(s)	91, 307, 997
Kpn2I	TCCGGA	1 cut(s)	886
KpnI	GGTACC	1 cut(s)	55
Kzo9I	GATC	4 cut(s)	427, 526, 552, 923
LmnI	GCTCC	7 cut(s)	103, 225, 491, 739, 751, 838, 1242
Lsp1109I	GCAGC	3 cut(s)	255, 705, 1270
LweI	GCATC	2 cut(s)	143, 847
MaeII	ACGT	4 cut(s)	66, 129, 628, 1129
MaeIII	GTNAC	6 cut(s)	181, 436, 506, 950, 959, 968
MalI	GATC	4 cut(s)	429, 528, 554, 925
MboI	GATC	4 cut(s)	427, 526, 552, 923
MboII	GAAGA	5 cut(s)	83, 785, 842, 866, 878
MflI	RGATCY	2 cut(s)	526, 923
MhlI	GDGCHC	3 cut(s)	108, 496, 1239
MluCI	AATT	6 cut(s)	81, 722, 1193, 1259, 1267, 1278
MmeI	TCCRAC	2 cut(s)	268, 1146
MroI	TCCGGA	1 cut(s)	886
MroXI	GAANNNNTTC	1 cut(s)	600
MseI	TTAA	3 cut(s)	1175, 1277, 1327
MslI	CAYNNNNRTG	2 cut(s)	756, 807
MspA1I	CMGCKG	1 cut(s)	718
MspCI	CTTAAG	1 cut(s)	1174
MspI	CCGG	3 cut(s)	56, 310, 887
MspR9I	CCNGG	3 cut(s)	56, 57, 653
MvaI	CCWGG	1 cut(s)	653
MvnI	CGCG	2 cut(s)	91, 743
MwoI	GCNNNNNNNGC	3 cut(s)	491, 740, 1067
NciI	CCSGG	2 cut(s)	56, 57
NdeII	GATC	4 cut(s)	427, 526, 552, 923
NlaIII	CATG	5 cut(s)	473, 912, 967, 1244, 1318
NlaIV	GGNNCC	7 cut(s)	53, 493, 528, 700, 747, 789, 900
NmuCI	GTSAC	3 cut(s)	436, 506, 950
NspI	RCATGY	1 cut(s)	1318
PaqCI	CACCTGC	1 cut(s)	535
PciI	ACATGT	1 cut(s)	1314
PcsI	WCGNNNNNNNCGW	1 cut(s)	408
PdmI	GAANNNNTTC	1 cut(s)	600
PfeI	GAWTC	7 cut(s)	357, 579, 613, 781, 846, 905, 1006
PflFI	GACNNNGTC	2 cut(s)	239, 627
PflMI	CCANNNNNTGG	2 cut(s)	208, 547
PkrI	GCNGC	5 cut(s)	270, 717, 720, 745, 1285
PpuMI	RGGWCCY	1 cut(s)	1204
PscI	ACATGT	1 cut(s)	1314
PshAI	GACNNNNGTC	2 cut(s)	1128, 1209
Psp124BI	GAGCTC	1 cut(s)	1239
Psp5II	RGGWCCY	1 cut(s)	1204
Psp6I	CCWGG	1 cut(s)	651
PspEI	GGTNACC	1 cut(s)	181
PspFI	CCCAGC	1 cut(s)	208
PspGI	CCWGG	1 cut(s)	651
PspN4I	GGNNCC	7 cut(s)	53, 493, 528, 700, 747, 789, 900
PspPI	GGNCC	4 cut(s)	199, 787, 799, 1204
PspPPI	RGGWCCY	1 cut(s)	1204
PsuI	RGATCY	2 cut(s)	526, 923
PsyI	GACNNNGTC	2 cut(s)	239, 627
RsaI	GTAC	5 cut(s)	53, 281, 338, 453, 1187
RsaNI	GTAC	5 cut(s)	52, 280, 337, 452, 1186
RseI	CAYNNNNRTG	2 cut(s)	756, 807
SacI	GAGCTC	1 cut(s)	1239
SaqAI	TTAA	3 cut(s)	1175, 1277, 1327
SatI	GCNGC	5 cut(s)	269, 716, 719, 744, 1284
Sau3AI	GATC	4 cut(s)	427, 526, 552, 923
Sau96I	GGNCC	4 cut(s)	199, 787, 799, 1204
ScrFI	CCNGG	3 cut(s)	56, 57, 653
SduI	GDGCHC	3 cut(s)	108, 496, 1239
SfaNI	GCATC	2 cut(s)	143, 847
SfcI	CTRYAG	1 cut(s)	1218
SinI	GGWCC	4 cut(s)	199, 787, 799, 1204
SmaI	CCCGGG	1 cut(s)	57
SmiMI	CAYNNNNRTG	2 cut(s)	756, 807
SmlI	CTYRAG	2 cut(s)	109, 1174
SmoI	CTYRAG	2 cut(s)	109, 1174
Sse9I	AATT	6 cut(s)	81, 722, 1193, 1259, 1267, 1278
SsiI	CCGC	8 cut(s)	49, 89, 288, 368, 485, 664, 716, 743
SstI	GAGCTC	1 cut(s)	1239
StyD4I	CCNGG	3 cut(s)	54, 55, 651
TaaI	ACNGT	5 cut(s)	251, 436, 691, 956, 992
TaiI	ACGT	4 cut(s)	69, 132, 631, 1132
TaqII	GACCGA	1 cut(s)	350
TasI	AATT	6 cut(s)	81, 722, 1193, 1259, 1267, 1278
TatI	WGTACW	1 cut(s)	279
TauI	GCSGC	2 cut(s)	718, 746
TfiI	GAWTC	7 cut(s)	357, 579, 613, 781, 846, 905, 1006
Tru1I	TTAA	3 cut(s)	1175, 1277, 1327
Tru9I	TTAA	3 cut(s)	1175, 1277, 1327
TscAI	CASTG	1 cut(s)	694
TseFI	GTSAC	3 cut(s)	436, 506, 950
TseI	GCWGC	3 cut(s)	268, 718, 1283
Tsp45I	GTSAC	3 cut(s)	436, 506, 950
TspDTI	ATGAA	9 cut(s)	25, 156, 308, 603, 867, 897, 1046, 1058, 1157
TspGWI	ACGGA	3 cut(s)	504, 539, 1140
TspMI	CCCGGG	1 cut(s)	55
TspRI	CASTG	1 cut(s)	694
Tth111I	GACNNNGTC	2 cut(s)	239, 627
Van91I	CCANNNNNTGG	2 cut(s)	208, 547
Vha464I	CTTAAG	1 cut(s)	1174
VpaK11BI	GGWCC	4 cut(s)	199, 787, 799, 1204
XapI	RAATTY	2 cut(s)	81, 1193
XceI	RCATGY	1 cut(s)	1318
XmaI	CCCGGG	1 cut(s)	55
XmnI	GAANNNNTTC	1 cut(s)	600
ZraI	GACGTC	2 cut(s)	130, 1130

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.