Rmu_sc0002045.1_g000023

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002045.1
OG0000124
Physical Location & Seq
Reverse (-)
124547 .. 126034
1488 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002045.1_g000023.1.cds

Sequence Viewer

Length: 1194 bp
atggagcatcacctcgacgtcaacttcccatatttctcagtgatggttcggctgccgactcagaacgtggacaaggcgaaaattccaccggcgtttatggagaggcacatgagggactttaccgggatgcggatcgacctgcgtttgtccggactgcctcgggttccgtaccgcatcggcctgacagcccaaggggatcaccggtggatgcacggaagttgggagtgcttcatcgagatgattcgtaaccacgaagggatgatgctgttggttttccgataccgcggtcatggccggttcacaatacgccggttccgatcagatgggactctgatgtacagatccccaaaaccccccccagggtacctaatagatcagaccgcagatcttgaagtgccctaccactccttcgtctccgacgtctgggccgaggatgtgaatgtgcccgccatcccaaggggtcgcctatacgctgccatccgcaatgatgccggtccaggaccgtgtctcttaaggtgggagtcaagggaggggatgatattctggcatgttgacctgactacaggcgtacgttgcatgacttttggtgaagggtggaacaggtttgcatcccacaatcggctgcttgatggaaagcggttttgtgtcttcacttacaggggtggccttgagttctccgtccttgttttccacaaacgcaggggtacgttgatgatgaatgtcagccaattcgctgctgtccccccaccacaacaagttccacagttgcaccaggtcgatgaacatgcagttgttcacccggggatgcaggaggtcaatgctgatgatgctcagcaggagatggacactgccgttgaagagggtgccggtttgggggcttctggtgatggccctgtttacgaggacgttgtcggtgagtacaaacgcctccgtcattgtgatatcaggattcaggaacgtcatggagcgtttcgcacacaagattctcgttatctgtttcctagaaagggtcgcgcatgtgttaagctgcaaaggtcagacggagccgtgtggcatatgggggtctcccctacgaacgacactcactacctgacaaggggattcagtaccttcaaggcgttcaatggactaggcacgggtcagcttctccgactctatatcgtctcaaaccggatgttcgtattcgacgcctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

397

Amino Acids

45.59

Weight (kDa)

9.0

Isoelectric Point (pI)

42.25

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000124)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g10992 FvH4_2g25150 FvH4_2g27910 FvH4_2g27931 FvH4_4g09443 FvH4_4g09490 FvH4_4g15990 FvH4_4g15991 FvH4_6g07180 FvH4_6g40320 FvH4_7g10222 FvH4_7g10251
rosa_chinensis RchiOBHm_Chr2g0155611
rosa_laevigata RLG00000009253 RLG00000009254 RLG00000011848 RLG00000017301 RLG00000017302 RLG00000034909
rosa_multiflora Rmu_co8063658.1_g000001 Rmu_co8240443.1_g000001 Rmu_co8264451.1_g000001 Rmu_co8381937.1_g000001 Rmu_co8419903.1_g000001 Rmu_co8513405.1_g000002 Rmu_co8522915.1_g000001 Rmu_co8522915.1_g000004 Rmu_sc0000279.1_g000024 Rmu_sc0000279.1_g000048 Rmu_sc0000642.1_g000017 Rmu_sc0002045.1_g000015 Rmu_sc0002045.1_g000018 Rmu_sc0002045.1_g000023 Rmu_sc0002045.1_g000028 Rmu_sc0003047.1_g000008 Rmu_sc0003179.1_g000019 Rmu_sc0003179.1_g000020 Rmu_sc0003179.1_g000022 Rmu_sc0003179.1_g000023 Rmu_sc0003422.1_g000011 Rmu_sc0004999.1_g000014 Rmu_sc0005712.1_g000018 Rmu_sc0005712.1_g000023 Rmu_sc0006198.1_g000019 Rmu_sc0006373.1_g000005 Rmu_sc0006514.1_g000028 Rmu_sc0006514.1_g000031 Rmu_sc0007367.1_g000010 Rmu_sc0011475.1_g000002 Rmu_sc0025304.1_g000001 Rmu_ssc0000161.1_g000030 Rmu_ssc0000161.1_g000032 Rmu_ssc0000387.1_g000018
rosa_roxburghii Rroxscaffold_1G00031090 Rroxscaffold_1G00032770 Rroxscaffold_1G00068950 Rroxscaffold_1G00069000 Rroxscaffold_1G00069010 Rroxscaffold_2G00129060 Rroxscaffold_2G00129100 Rroxscaffold_4G00309310 Rroxscaffold_4G00309320 Rroxscaffold_5G00350620 Rroxscaffold_5G00350630 Rroxscaffold_7G00162650 Rroxscaffold_7G00162660 Rroxscaffold_7G00162710
rosa_rugosa Rorug02G0564700 Rorug02G0564700 Rorug03G0343100 Rorug04G0189700 Rorug05G0102800 Rorug05G0102900 Rorug05G0103000 Rorug05G0106500 Rorug05G0106600 Rorug05G0106700 Rorug05G0252800 Rorug07G0182100 Rorug07G0283500 Rorug07G0283600
rosa_samantha Rh1AG004000 Rh1AG004100 Rh1AG004200 Rh1AG004400 Rh1AG004500 Rh1AG004600 Rh1AG004800 Rh1AG004900 Rh1AG005300 Rh1AG007000 Rh1AG115000 Rh1CG049400 Rh1CG055400 Rh1CG111000 Rh1DG053600 Rh1DG053700 Rh1DG059300 Rh1DG119700 Rh1DG177100 Rh1DG177200 Rh2AG353800 Rh2AG354000 Rh2AG354100 Rh2AG354300 Rh2AG354400 Rh2AG354500 Rh2AG354600 Rh2AG354700 Rh2AG642300 Rh2AG642400 Rh2AG642500 Rh2BG336500 Rh2BG336600 Rh2BG336700 Rh2BG336800 Rh2BG336900 Rh2CG299900 Rh2CG300000 Rh2CG300100 Rh2DG337000 Rh2DG337100 Rh3AG246600 Rh3BG121900 Rh3BG122300 Rh3BG122600 Rh3BG122700 Rh3DG304800 Rh3DG304900 Rh4AG148800 Rh4AG249000 Rh4AG249100 Rh4AG249200 Rh4BG182700 Rh4BG182800 Rh4BG182900 Rh4BG254400 Rh4BG254500 Rh4BG254600 Rh4CG155500 Rh4CG155700 Rh4DG057900 Rh4DG058000 Rh4DG058100 Rh4DG058200 Rh4DG129100 Rh5AG364500 Rh5AG364600 Rh5AG364800 Rh5AG365300 Rh5CG363700 Rh5CG497600 Rh5DG239500 Rh5DG239600 Rh6AG173500 Rh6AG175400 Rh6BG075900 Rh6BG076300 Rh6BG076400 Rh6BG076500 Rh6BG076600 Rh6CG151000 Rh6CG151200 Rh6CG151300 Rh6CG151400 Rh6CG205200 Rh6CG205300 Rh6CG419700 Rh6CG419900 Rh6CG420100 Rh6DG498700 Rh6DG498800 Rh7AG329000 Rh7AG329100 Rh7AG329300 Rh7AG329400 Rh7AG353000 Rh7AG353100 Rh7AG353300 Rh7AG353400 Rh7AG353500 Rh7CG346400 Rh7CG346500 Rh7CG346700 Rh7CG370800 Rh7CG370900 Rh7CG371000 Rh7CG371100 Rh7DG325000 Rh7DG325100 Rh7DG325200 Rh7DG325300 Rh7DG353100 Rh7DG353200 Rh7DG353300 Rh7DG363500 Rh7DG364000
rosa_wichuraiana Rw0G002290 Rw0G012780 Rw1G000260 Rw1G000270 Rw1G010400 Rw1G010410 Rw1G010420 Rw1G010430 Rw1G010440 Rw2G003210 Rw2G003220 Rw4G010970 Rw5G048520 Rw6G013320 Rw6G013470 Rw6G014940 Rw6G016570 Rw6G016590 Rw6G016600 Rw6G016610 Rw6G016620 Rw6G035450 Rw7G027760 Rw7G030460

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 21, 423
Acc36I ACCTGC 1 cut(s) 147
Acc65I GGTACC 1 cut(s) 363
AccB1I GGYRCC 2 cut(s) 363, 863
AccII CGCG 2 cut(s) 285, 1014
AccIII TCCGGA 1 cut(s) 149
AciI CCGC 8 cut(s) 130, 172, 283, 285, 381, 447, 481, 637
AclWI GGATC 3 cut(s) 140, 204, 336
AcoI YGGCCR 1 cut(s) 292
AcsI RAATTY 1 cut(s) 81
AcyI GRCGYC 3 cut(s) 18, 420, 1188
AfaI GTAC 7 cut(s) 170, 338, 365, 570, 706, 920, 1108
AfiI CCNNNNNNNGG 9 cut(s) 129, 359, 360, 423, 456, 618, 873, 1007, 1096
AflII CTTAAG 1 cut(s) 511
AgeI ACCGGT 1 cut(s) 201
AgsI TTSAA 4 cut(s) 392, 857, 1114, 1123
AjnI CCWGG 3 cut(s) 358, 496, 771
AluBI AGCT 2 cut(s) 1027, 1144
AluI AGCT 2 cut(s) 1027, 1144
Alw26I GTCTC 4 cut(s) 418, 512, 1069, 1168
AlwI GGATC 3 cut(s) 140, 204, 336
Ama87I CYCGRG 2 cut(s) 159, 799
Aor13HI TCCGGA 1 cut(s) 149
AoxI GGCC 5 cut(s) 178, 292, 426, 664, 889
ApeKI GCWGC 5 cut(s) 52, 473, 622, 734, 1027
ApoI RAATTY 1 cut(s) 81
AsiGI ACCGGT 1 cut(s) 201
Asp718I GGTACC 1 cut(s) 363
AspLEI GCGC 1 cut(s) 1016
AspS9I GGNCC 4 cut(s) 426, 494, 500, 890
AsuC2I CCSGG 3 cut(s) 124, 800, 801
AsuHPI GGTGA 5 cut(s) 191, 599, 788, 896, 926
AvaI CYCGRG 2 cut(s) 159, 799
AvaII GGWCC 2 cut(s) 494, 500
BaeGI GKGCMC 2 cut(s) 399, 447
BaeI ACNNNNGTAYC 2 cut(s) 271, 304
BanI GGYRCC 2 cut(s) 363, 863
BbsI GAAGAC 1 cut(s) 640
BbvI GCAGC 5 cut(s) 39, 460, 609, 721, 1014
BccI CCATC 7 cut(s) 37, 317, 458, 485, 623, 835, 881
BceAI ACGGC 2 cut(s) 836, 1031
BcgI CGANNNNNNTGC 2 cut(s) 767, 801
BciT130I CCWGG 3 cut(s) 360, 498, 773
BcnI CCSGG 3 cut(s) 124, 800, 801
BcoDI GTCTC 4 cut(s) 418, 512, 1069, 1168
BfaI CTAG 2 cut(s) 1002, 1130
BfmI CTRYAG 1 cut(s) 561
BfrI CTTAAG 1 cut(s) 511
BfuAI ACCTGC 1 cut(s) 147
BglII AGATCT 1 cut(s) 385
BisI GCNGC 5 cut(s) 53, 474, 623, 735, 1028
BlpI GCTNAGC 1 cut(s) 831
BlsI GCNGC 5 cut(s) 54, 475, 624, 736, 1029
Bme1390I CCNGG 6 cut(s) 124, 360, 498, 773, 800, 801
Bme18I GGWCC 2 cut(s) 494, 500
BmeT110I CYCGRG 2 cut(s) 159, 799
BmgT120I GGNCC 4 cut(s) 426, 494, 500, 890
BmiI GGNNCC 5 cut(s) 165, 314, 365, 865, 1045
BmrFI CCNGG 6 cut(s) 124, 360, 498, 773, 800, 801
BmsI GCATC 9 cut(s) 16, 117, 183, 198, 252, 478, 617, 795, 817
BpiI GAAGAC 1 cut(s) 640
Bpu1102I GCTNAGC 1 cut(s) 831
BpuEI CTTGAG 1 cut(s) 689
BpuMI CCSGG 3 cut(s) 124, 800, 801
BsaBI GATNNNNATC 1 cut(s) 131
BsaHI GRCGYC 3 cut(s) 18, 420, 1188
BsaI GGTCTC 1 cut(s) 1069
BsaJI CCNNGG 9 cut(s) 158, 190, 283, 358, 359, 429, 455, 799, 800
BsaWI WCCGGW 3 cut(s) 149, 201, 1170
Bsc4I CCNNNNNNNGG 9 cut(s) 129, 359, 360, 423, 456, 618, 873, 1007, 1096
Bse118I RCCGGY 6 cut(s) 88, 201, 294, 309, 491, 866
Bse3DI GCAATG 1 cut(s) 490
Bse8I GATNNNNATC 1 cut(s) 131
BseAI TCCGGA 1 cut(s) 149
BseBI CCWGG 3 cut(s) 360, 498, 773
BseDI CCNNGG 9 cut(s) 158, 190, 283, 358, 359, 429, 455, 799, 800
BseJI GATNNNNATC 1 cut(s) 131
BseLI CCNNNNNNNGG 9 cut(s) 129, 359, 360, 423, 456, 618, 873, 1007, 1096
BseMI GCAATG 1 cut(s) 490
BseMII CTCAG 3 cut(s) 51, 74, 845
BseSI GKGCMC 2 cut(s) 399, 447
BseXI GCAGC 5 cut(s) 39, 460, 609, 721, 1014
Bsh1236I CGCG 2 cut(s) 285, 1014
BshFI GGCC 5 cut(s) 180, 294, 428, 666, 891
BshNI GGYRCC 2 cut(s) 363, 863
BshTI ACCGGT 1 cut(s) 201
BsiHKCI CYCGRG 2 cut(s) 159, 799
BsiWI CGTACG 1 cut(s) 568
BslFI GGGAC 3 cut(s) 128, 340, 725
BslI CCNNNNNNNGG 9 cut(s) 129, 359, 360, 423, 456, 618, 873, 1007, 1096
BsmAI GTCTC 4 cut(s) 418, 512, 1069, 1168
BsmBI CGTCTC 2 cut(s) 418, 1168
BsmFI GGGAC 3 cut(s) 128, 340, 725
BsnI GGCC 5 cut(s) 180, 294, 428, 666, 891
Bso31I GGTCTC 1 cut(s) 1069
BsoBI CYCGRG 2 cut(s) 159, 799
Bsp1286I GDGCHC 2 cut(s) 399, 447
Bsp13I TCCGGA 1 cut(s) 149
Bsp1407I TGTACA 1 cut(s) 336
Bsp143I GATC 6 cut(s) 132, 196, 317, 341, 373, 385
Bsp1720I GCTNAGC 1 cut(s) 831
BspACI CCGC 8 cut(s) 130, 172, 283, 285, 381, 447, 481, 637
BspANI GGCC 5 cut(s) 180, 294, 428, 666, 891
BspCNI CTCAG 3 cut(s) 50, 73, 844
BspEI TCCGGA 1 cut(s) 149
BspFNI CGCG 2 cut(s) 285, 1014
BspLI GGNNCC 5 cut(s) 165, 314, 365, 865, 1045
BspMI ACCTGC 1 cut(s) 147
BspPI GGATC 3 cut(s) 140, 204, 336
BspT107I GGYRCC 2 cut(s) 363, 863
BspTI CTTAAG 1 cut(s) 511
BspTNI GGTCTC 1 cut(s) 1069
BsrDI GCAATG 1 cut(s) 490
BsrFI RCCGGY 6 cut(s) 88, 201, 294, 309, 491, 866
BsrGI TGTACA 1 cut(s) 336
BssAI RCCGGY 6 cut(s) 88, 201, 294, 309, 491, 866
BssECI CCNNGG 9 cut(s) 158, 190, 283, 358, 359, 429, 455, 799, 800
BssMI GATC 6 cut(s) 132, 196, 317, 341, 373, 385
BssNI GRCGYC 3 cut(s) 18, 420, 1188
BssT1I CCWWGG 2 cut(s) 190, 455
Bst2UI CCWGG 3 cut(s) 360, 498, 773
Bst4CI ACNGT 2 cut(s) 504, 765
Bst6I CTCTTC 1 cut(s) 852
BstACI GRCGYC 3 cut(s) 18, 420, 1188
BstAFI CTTAAG 1 cut(s) 511
BstAUI TGTACA 1 cut(s) 336
BstC8I GCNNGC 1 cut(s) 447
BstDEI CTNAG 3 cut(s) 37, 60, 831
BstDSI CCRYGG 1 cut(s) 283
BstFNI CGCG 2 cut(s) 285, 1014
BstHHI GCGC 1 cut(s) 1016
BstKTI GATC 6 cut(s) 135, 199, 320, 344, 376, 388
BstMAI GTCTC 4 cut(s) 418, 512, 1069, 1168
BstMBI GATC 6 cut(s) 132, 196, 317, 341, 373, 385
BstMWI GCNNNNNNNGC 3 cut(s) 291, 573, 827
BstNI CCWGG 3 cut(s) 360, 498, 773
BstNSI RCATGY 3 cut(s) 551, 788, 1020
BstSCI CCNGG 6 cut(s) 122, 358, 496, 771, 798, 799
BstSFI CTRYAG 1 cut(s) 561
BstSLI GKGCMC 2 cut(s) 399, 447
BstUI CGCG 2 cut(s) 285, 1014
BstV1I GCAGC 5 cut(s) 39, 460, 609, 721, 1014
BstV2I GAAGAC 1 cut(s) 640
BstX2I RGATCY 2 cut(s) 341, 385
BstYI RGATCY 2 cut(s) 341, 385
BsuRI GGCC 5 cut(s) 180, 294, 428, 666, 891
BtgI CCRYGG 1 cut(s) 283
BtsI GCAGTG 1 cut(s) 846
BtsIMutI CAGTG 2 cut(s) 45, 846
BveI ACCTGC 1 cut(s) 147
Cac8I GCNNGC 1 cut(s) 447
CfoI GCGC 1 cut(s) 1016
Cfr10I RCCGGY 6 cut(s) 88, 201, 294, 309, 491, 866
Cfr13I GGNCC 4 cut(s) 426, 494, 500, 890
Cfr42I CCGCGG 1 cut(s) 286
Cfr9I CCCGGG 1 cut(s) 799
CsiI ACCWGGT 1 cut(s) 771
Csp6I GTAC 7 cut(s) 169, 337, 364, 569, 705, 919, 1107
CspAI ACCGGT 1 cut(s) 201
CviAII CATG 7 cut(s) 109, 290, 548, 577, 785, 962, 1017
CviQI GTAC 7 cut(s) 169, 337, 364, 569, 705, 919, 1107
DdeI CTNAG 3 cut(s) 37, 60, 831
DpnI GATC 6 cut(s) 134, 198, 319, 343, 375, 387
DpnII GATC 6 cut(s) 132, 196, 317, 341, 373, 385
EaeI YGGCCR 1 cut(s) 292
Eam1104I CTCTTC 1 cut(s) 852
EarI CTCTTC 1 cut(s) 852
Eco130I CCWWGG 2 cut(s) 190, 455
Eco31I GGTCTC 1 cut(s) 1069
Eco32I GATATC 1 cut(s) 943
Eco47I GGWCC 2 cut(s) 494, 500
Eco88I CYCGRG 2 cut(s) 159, 799
EcoRII CCWGG 3 cut(s) 358, 496, 771
EcoRV GATATC 1 cut(s) 943
EcoT14I CCWWGG 2 cut(s) 190, 455
ErhI CCWWGG 2 cut(s) 190, 455
Esp3I CGTCTC 2 cut(s) 418, 1168
FaeI CATG 7 cut(s) 112, 293, 551, 580, 788, 965, 1020
FaqI GGGAC 3 cut(s) 128, 340, 725
FatI CATG 7 cut(s) 108, 289, 547, 576, 784, 961, 1016
FauI CCCGC 1 cut(s) 454
FauNDI CATATG 1 cut(s) 1056
Fnu4HI GCNGC 5 cut(s) 53, 474, 623, 735, 1028
Fsp4HI GCNGC 5 cut(s) 53, 474, 623, 735, 1028
FspBI CTAG 2 cut(s) 1002, 1130
GlaI GCGC 1 cut(s) 1015
GluI GCNGC 5 cut(s) 53, 474, 623, 735, 1028
HaeIII GGCC 5 cut(s) 180, 294, 428, 666, 891
HhaI GCGC 1 cut(s) 1016
Hin1I GRCGYC 3 cut(s) 18, 420, 1188
Hin1II CATG 7 cut(s) 112, 293, 551, 580, 788, 965, 1020
Hin6I GCGC 1 cut(s) 1014
HinP1I GCGC 1 cut(s) 1014
HincII GTYRAC 2 cut(s) 22, 553
HindII GTYRAC 2 cut(s) 22, 553
HinfI GANTC 8 cut(s) 58, 241, 328, 521, 949, 983, 1101, 1152
HphI GGTGA 5 cut(s) 191, 599, 788, 896, 926
Hpy166II GTNNAC 6 cut(s) 22, 70, 300, 553, 796, 898
Hpy188I TCNGA 9 cut(s) 63, 278, 317, 322, 333, 378, 418, 1039, 1151
Hpy188III TCNNGA 5 cut(s) 150, 235, 389, 946, 953
Hpy8I GTNNAC 6 cut(s) 22, 70, 300, 553, 796, 898
Hpy99I CGWCG 3 cut(s) 20, 422, 1190
HpyAV CCTTC 4 cut(s) 248, 418, 584, 1120
HpyCH4III ACNGT 2 cut(s) 504, 765
HpyCH4IV ACGT 7 cut(s) 18, 66, 420, 571, 707, 906, 958
HpyCH4V TGCA 7 cut(s) 211, 576, 608, 769, 788, 808, 1030
HpyF10VI GCNNNNNNNGC 3 cut(s) 291, 573, 827
HpyF3I CTNAG 3 cut(s) 37, 60, 831
HpySE526I ACGT 7 cut(s) 18, 66, 420, 571, 707, 906, 958
Hsp92I GRCGYC 3 cut(s) 18, 420, 1188
Hsp92II CATG 7 cut(s) 112, 293, 551, 580, 788, 965, 1020
HspAI GCGC 1 cut(s) 1014
Kpn2I TCCGGA 1 cut(s) 149
KpnI GGTACC 1 cut(s) 367
KspI CCGCGG 1 cut(s) 286
Kzo9I GATC 6 cut(s) 132, 196, 317, 341, 373, 385
LmnI GCTCC 3 cut(s) 4, 965, 1043
Lsp1109I GCAGC 5 cut(s) 39, 460, 609, 721, 1014
LweI GCATC 9 cut(s) 16, 117, 183, 198, 252, 478, 617, 795, 817
MabI ACCWGGT 1 cut(s) 771
MaeI CTAG 2 cut(s) 1002, 1130
MaeII ACGT 7 cut(s) 18, 66, 420, 571, 707, 906, 958
MaeIII GTNAC 1 cut(s) 245
MalI GATC 6 cut(s) 134, 198, 319, 343, 375, 387
MboI GATC 6 cut(s) 132, 196, 317, 341, 373, 385
MboII GAAGA 2 cut(s) 640, 869
MflI RGATCY 2 cut(s) 341, 385
MhlI GDGCHC 2 cut(s) 399, 447
MluCI AATT 2 cut(s) 81, 728
MlyI GAGTC 4 cut(s) 52, 322, 530, 1146
MmeI TCCRAC 2 cut(s) 441, 1174
MroI TCCGGA 1 cut(s) 149
MseI TTAA 2 cut(s) 512, 1023
MslI CAYNNNNRTG 1 cut(s) 236
MspA1I CMGCKG 1 cut(s) 285
MspCI CTTAAG 1 cut(s) 511
MspR9I CCNGG 6 cut(s) 124, 360, 498, 773, 800, 801
MvaI CCWGG 3 cut(s) 360, 498, 773
MvnI CGCG 2 cut(s) 285, 1014
MwoI GCNNNNNNNGC 3 cut(s) 291, 573, 827
NciI CCSGG 3 cut(s) 124, 800, 801
NdeI CATATG 1 cut(s) 1056
NdeII GATC 6 cut(s) 132, 196, 317, 341, 373, 385
NlaIII CATG 7 cut(s) 112, 293, 551, 580, 788, 965, 1020
NlaIV GGNNCC 5 cut(s) 165, 314, 365, 865, 1045
NmeAIII GCCGAG 1 cut(s) 454
NspI RCATGY 3 cut(s) 551, 788, 1020
PasI CCCWGGG 1 cut(s) 359
PcsI WCGNNNNNNNCGW 3 cut(s) 313, 417, 426
PfeI GAWTC 4 cut(s) 241, 949, 983, 1101
Pfl23II CGTACG 1 cut(s) 568
PflFI GACNNNGTC 2 cut(s) 504, 908
PfoI TCCNGGA 1 cut(s) 496
PinAI ACCGGT 1 cut(s) 201
PkrI GCNGC 5 cut(s) 54, 475, 624, 736, 1029
PleI GAGTC 4 cut(s) 52, 322, 529, 1146
PpsI GAGTC 4 cut(s) 52, 322, 529, 1146
Psp6I CCWGG 3 cut(s) 358, 496, 771
PspGI CCWGG 3 cut(s) 358, 496, 771
PspLI CGTACG 1 cut(s) 568
PspN4I GGNNCC 5 cut(s) 165, 314, 365, 865, 1045
PspPI GGNCC 4 cut(s) 426, 494, 500, 890
PsuI RGATCY 2 cut(s) 341, 385
PsyI GACNNNGTC 2 cut(s) 504, 908
RsaI GTAC 7 cut(s) 170, 338, 365, 570, 706, 920, 1108
RsaNI GTAC 7 cut(s) 169, 337, 364, 569, 705, 919, 1107
RseI CAYNNNNRTG 1 cut(s) 236
SacII CCGCGG 1 cut(s) 286
SaqAI TTAA 2 cut(s) 512, 1023
SatI GCNGC 5 cut(s) 53, 474, 623, 735, 1028
Sau3AI GATC 6 cut(s) 132, 196, 317, 341, 373, 385
Sau96I GGNCC 4 cut(s) 426, 494, 500, 890
SchI GAGTC 4 cut(s) 52, 322, 530, 1146
ScrFI CCNGG 6 cut(s) 124, 360, 498, 773, 800, 801
SduI GDGCHC 2 cut(s) 399, 447
SexAI ACCWGGT 1 cut(s) 771
SfaNI GCATC 9 cut(s) 16, 117, 183, 198, 252, 478, 617, 795, 817
SfcI CTRYAG 1 cut(s) 561
Sfr303I CCGCGG 1 cut(s) 286
SgrAI CRCCGGYG 2 cut(s) 88, 201
SgrBI CCGCGG 1 cut(s) 286
SinI GGWCC 2 cut(s) 494, 500
SmaI CCCGGG 1 cut(s) 801
SmiMI CAYNNNNRTG 1 cut(s) 236
SmlI CTYRAG 2 cut(s) 511, 668
SmoI CTYRAG 2 cut(s) 511, 668
Sse9I AATT 2 cut(s) 81, 728
SsiI CCGC 8 cut(s) 130, 172, 283, 285, 381, 447, 481, 637
SspMI CTAG 2 cut(s) 1002, 1130
StyD4I CCNGG 6 cut(s) 122, 358, 496, 771, 798, 799
StyI CCWWGG 2 cut(s) 190, 455
TaaI ACNGT 2 cut(s) 504, 765
TaiI ACGT 7 cut(s) 21, 69, 423, 574, 710, 909, 961
TaqI TCGA 5 cut(s) 15, 135, 234, 777, 1185
TasI AATT 2 cut(s) 81, 728
TatI WGTACW 2 cut(s) 336, 918
TfiI GAWTC 4 cut(s) 241, 949, 983, 1101
Tru1I TTAA 2 cut(s) 512, 1023
Tru9I TTAA 2 cut(s) 512, 1023
TscAI CASTG 2 cut(s) 45, 853
TseI GCWGC 5 cut(s) 52, 473, 622, 734, 1027
TspDTI ATGAA 3 cut(s) 220, 731, 795
TspGWI ACGGA 5 cut(s) 156, 228, 667, 920, 1056
TspMI CCCGGG 1 cut(s) 799
TspRI CASTG 2 cut(s) 45, 853
Tth111I GACNNNGTC 2 cut(s) 504, 908
Vha464I CTTAAG 1 cut(s) 511
VpaK11BI GGWCC 2 cut(s) 494, 500
XapI RAATTY 1 cut(s) 81
XceI RCATGY 3 cut(s) 551, 788, 1020
XmaI CCCGGG 1 cut(s) 799
XspI CTAG 2 cut(s) 1002, 1130
ZraI GACGTC 2 cut(s) 19, 421
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.