Pentatricopeptide repeat-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 508 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 128 |
| AatII | GACGTC | 1 cut(s) | 132 |
| Acc36I | ACCTGC | 1 cut(s) | 508 |
| Acc65I | GGTACC | 1 cut(s) | 51 |
| AccB1I | GGYRCC | 1 cut(s) | 51 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 208, 520 |
| AccII | CGCG | 1 cut(s) | 91 |
| AciI | CCGC | 5 cut(s) | 49, 89, 288, 368, 637 |
| AclWI | GGATC | 3 cut(s) | 435, 494, 507 |
| AcoI | YGGCCR | 1 cut(s) | 3 |
| AcsI | RAATTY | 1 cut(s) | 81 |
| AcyI | GRCGYC | 1 cut(s) | 129 |
| AfaI | GTAC | 5 cut(s) | 53, 281, 338, 453, 558 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 192, 208, 359, 390, 520 |
| AgsI | TTSAA | 1 cut(s) | 13 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 65 |
| AjnI | CCWGG | 1 cut(s) | 624 |
| AluBI | AGCT | 3 cut(s) | 33, 547, 591 |
| AluI | AGCT | 3 cut(s) | 33, 547, 591 |
| Alw21I | GWGCWC | 1 cut(s) | 108 |
| Alw26I | GTCTC | 1 cut(s) | 488 |
| AlwI | GGATC | 3 cut(s) | 435, 494, 507 |
| Ama87I | CYCGRG | 1 cut(s) | 55 |
| AoxI | GGCC | 1 cut(s) | 3 |
| ApeKI | GCWGC | 1 cut(s) | 268 |
| ApoI | RAATTY | 1 cut(s) | 81 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 573 |
| Asp718I | GGTACC | 1 cut(s) | 51 |
| AspLEI | GCGC | 2 cut(s) | 93, 309 |
| AspS9I | GGNCC | 1 cut(s) | 199 |
| AsuC2I | CCSGG | 2 cut(s) | 56, 57 |
| AsuHPI | GGTGA | 4 cut(s) | 17, 356, 372, 610 |
| AvaI | CYCGRG | 1 cut(s) | 55 |
| AvaII | GGWCC | 1 cut(s) | 199 |
| BamHI | GGATCC | 1 cut(s) | 499 |
| BanI | GGYRCC | 1 cut(s) | 51 |
| Bbv12I | GWGCWC | 1 cut(s) | 108 |
| BbvI | GCAGC | 1 cut(s) | 255 |
| BccI | CCATC | 3 cut(s) | 143, 398, 483 |
| BciT130I | CCWGG | 1 cut(s) | 626 |
| BcnI | CCSGG | 2 cut(s) | 56, 57 |
| BcoDI | GTCTC | 1 cut(s) | 488 |
| BfuAI | ACCTGC | 1 cut(s) | 508 |
| BisI | GCNGC | 1 cut(s) | 269 |
| BlsI | GCNGC | 1 cut(s) | 270 |
| Bme1390I | CCNGG | 3 cut(s) | 56, 57, 626 |
| Bme18I | GGWCC | 1 cut(s) | 199 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 65 |
| BmeT110I | CYCGRG | 1 cut(s) | 55 |
| BmgT120I | GGNCC | 1 cut(s) | 199 |
| BmiI | GGNNCC | 2 cut(s) | 53, 501 |
| BmrFI | CCNGG | 3 cut(s) | 56, 57, 626 |
| BmsI | GCATC | 1 cut(s) | 143 |
| BpmI | CTGGAG | 2 cut(s) | 260, 489 |
| BpuEI | CTTGAG | 1 cut(s) | 130 |
| BpuMI | CCSGG | 2 cut(s) | 56, 57 |
| BsaHI | GRCGYC | 1 cut(s) | 129 |
| BsaJI | CCNNGG | 2 cut(s) | 55, 625 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 487, 517 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 192, 208, 359, 390, 520 |
| Bse118I | RCCGGY | 1 cut(s) | 309 |
| Bse1I | ACTGG | 3 cut(s) | 144, 277, 506 |
| BseBI | CCWGG | 1 cut(s) | 626 |
| BseDI | CCNNGG | 2 cut(s) | 55, 625 |
| BseGI | GGATG | 2 cut(s) | 154, 158 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 192, 208, 359, 390, 520 |
| BseNI | ACTGG | 3 cut(s) | 144, 277, 506 |
| BseRI | GAGGAG | 1 cut(s) | 336 |
| BseXI | GCAGC | 1 cut(s) | 255 |
| BseYI | CCCAGC | 1 cut(s) | 208 |
| Bsh1236I | CGCG | 1 cut(s) | 91 |
| BshFI | GGCC | 1 cut(s) | 5 |
| BshNI | GGYRCC | 1 cut(s) | 51 |
| BsiHKAI | GWGCWC | 1 cut(s) | 108 |
| BsiHKCI | CYCGRG | 1 cut(s) | 55 |
| BsiSI | CCGG | 2 cut(s) | 56, 310 |
| BslFI | GGGAC | 2 cut(s) | 72, 128 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 192, 208, 359, 390, 520 |
| BsmAI | GTCTC | 1 cut(s) | 488 |
| BsmBI | CGTCTC | 1 cut(s) | 488 |
| BsmFI | GGGAC | 2 cut(s) | 72, 128 |
| BsnI | GGCC | 1 cut(s) | 5 |
| BsoBI | CYCGRG | 1 cut(s) | 55 |
| Bsp1286I | GDGCHC | 1 cut(s) | 108 |
| Bsp143I | GATC | 3 cut(s) | 427, 499, 525 |
| BspACI | CCGC | 5 cut(s) | 49, 89, 288, 368, 637 |
| BspANI | GGCC | 1 cut(s) | 5 |
| BspFNI | CGCG | 1 cut(s) | 91 |
| BspLI | GGNNCC | 2 cut(s) | 53, 501 |
| BspMI | ACCTGC | 1 cut(s) | 508 |
| BspPI | GGATC | 3 cut(s) | 435, 494, 507 |
| BspT107I | GGYRCC | 1 cut(s) | 51 |
| BsrFI | RCCGGY | 1 cut(s) | 309 |
| BsrI | ACTGG | 3 cut(s) | 144, 277, 506 |
| BssAI | RCCGGY | 1 cut(s) | 309 |
| BssECI | CCNNGG | 2 cut(s) | 55, 625 |
| BssMI | GATC | 3 cut(s) | 427, 499, 525 |
| BssNI | GRCGYC | 1 cut(s) | 129 |
| Bst2UI | CCWGG | 1 cut(s) | 626 |
| Bst4CI | ACNGT | 3 cut(s) | 251, 436, 442 |
| Bst6I | CTCTTC | 1 cut(s) | 346 |
| BstACI | GRCGYC | 1 cut(s) | 129 |
| BstDEI | CTNAG | 1 cut(s) | 548 |
| BstEII | GGTNACC | 2 cut(s) | 181, 362 |
| BstF5I | GGATG | 2 cut(s) | 154, 158 |
| BstFNI | CGCG | 1 cut(s) | 91 |
| BstHHI | GCGC | 2 cut(s) | 93, 309 |
| BstKTI | GATC | 3 cut(s) | 430, 502, 528 |
| BstMAI | GTCTC | 1 cut(s) | 488 |
| BstMBI | GATC | 3 cut(s) | 427, 499, 525 |
| BstNI | CCWGG | 1 cut(s) | 626 |
| BstPI | GGTNACC | 2 cut(s) | 181, 362 |
| BstSCI | CCNGG | 3 cut(s) | 54, 55, 624 |
| BstUI | CGCG | 1 cut(s) | 91 |
| BstV1I | GCAGC | 1 cut(s) | 255 |
| BstX2I | RGATCY | 1 cut(s) | 499 |
| BstYI | RGATCY | 1 cut(s) | 499 |
| BsuRI | GGCC | 1 cut(s) | 5 |
| BtsCI | GGATG | 2 cut(s) | 154, 158 |
| BtsIMutI | CAGTG | 1 cut(s) | 438 |
| BveI | ACCTGC | 1 cut(s) | 508 |
| CfoI | GCGC | 2 cut(s) | 93, 309 |
| Cfr10I | RCCGGY | 1 cut(s) | 309 |
| Cfr13I | GGNCC | 1 cut(s) | 199 |
| Cfr9I | CCCGGG | 1 cut(s) | 55 |
| Csp6I | GTAC | 5 cut(s) | 52, 280, 337, 452, 557 |
| CviAII | CATG | 2 cut(s) | 470, 560 |
| CviJI | RGCY | 6 cut(s) | 5, 33, 208, 408, 547, 591 |
| CviKI_1 | RGCY | 6 cut(s) | 5, 33, 208, 408, 547, 591 |
| CviQI | GTAC | 5 cut(s) | 52, 280, 337, 452, 557 |
| DdeI | CTNAG | 1 cut(s) | 548 |
| DpnI | GATC | 3 cut(s) | 429, 501, 527 |
| DpnII | GATC | 3 cut(s) | 427, 499, 525 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 128 |
| DriI | GACNNNNNGTC | 1 cut(s) | 65 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 128 |
| EaeI | YGGCCR | 1 cut(s) | 3 |
| Eam1104I | CTCTTC | 1 cut(s) | 346 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 65 |
| EarI | CTCTTC | 1 cut(s) | 346 |
| EciI | GGCGGA | 1 cut(s) | 303 |
| Eco47I | GGWCC | 1 cut(s) | 199 |
| Eco88I | CYCGRG | 1 cut(s) | 55 |
| Eco91I | GGTNACC | 2 cut(s) | 181, 362 |
| EcoO65I | GGTNACC | 2 cut(s) | 181, 362 |
| EcoRII | CCWGG | 1 cut(s) | 624 |
| Esp3I | CGTCTC | 1 cut(s) | 488 |
| FaeI | CATG | 2 cut(s) | 473, 563 |
| FaiI | YATR | 6 cut(s) | 17, 169, 174, 315, 471, 561 |
| FaqI | GGGAC | 2 cut(s) | 72, 128 |
| FatI | CATG | 2 cut(s) | 469, 559 |
| FauI | CCCGC | 1 cut(s) | 375 |
| Fnu4HI | GCNGC | 1 cut(s) | 269 |
| FokI | GGATG | 2 cut(s) | 161, 165 |
| Fsp4HI | GCNGC | 1 cut(s) | 269 |
| GlaI | GCGC | 2 cut(s) | 92, 308 |
| GluI | GCNGC | 1 cut(s) | 269 |
| GsaI | CCCAGC | 1 cut(s) | 212 |
| GsuI | CTGGAG | 2 cut(s) | 260, 489 |
| HaeIII | GGCC | 1 cut(s) | 5 |
| HapII | CCGG | 2 cut(s) | 56, 310 |
| HhaI | GCGC | 2 cut(s) | 93, 309 |
| Hin1I | GRCGYC | 1 cut(s) | 129 |
| Hin1II | CATG | 2 cut(s) | 473, 563 |
| Hin6I | GCGC | 2 cut(s) | 91, 307 |
| HinP1I | GCGC | 2 cut(s) | 91, 307 |
| HindIII | AAGCTT | 1 cut(s) | 31 |
| HinfI | GANTC | 3 cut(s) | 256, 357, 552 |
| HpaII | CCGG | 2 cut(s) | 56, 310 |
| HphI | GGTGA | 4 cut(s) | 17, 356, 372, 610 |
| Hpy166II | GTNNAC | 2 cut(s) | 322, 618 |
| Hpy188I | TCNGA | 5 cut(s) | 245, 255, 418, 432, 488 |
| Hpy188III | TCNNGA | 1 cut(s) | 233 |
| Hpy8I | GTNNAC | 2 cut(s) | 322, 618 |
| Hpy99I | CGWCG | 5 cut(s) | 44, 71, 134, 305, 606 |
| HpyAV | CCTTC | 1 cut(s) | 172 |
| HpyCH4III | ACNGT | 3 cut(s) | 251, 436, 442 |
| HpyCH4IV | ACGT | 4 cut(s) | 66, 129, 538, 601 |
| HpyCH4V | TGCA | 1 cut(s) | 156 |
| HpyF3I | CTNAG | 1 cut(s) | 548 |
| HpySE526I | ACGT | 4 cut(s) | 66, 129, 538, 601 |
| Hsp92I | GRCGYC | 1 cut(s) | 129 |
| Hsp92II | CATG | 2 cut(s) | 473, 563 |
| HspAI | GCGC | 2 cut(s) | 91, 307 |
| KpnI | GGTACC | 1 cut(s) | 55 |
| Kzo9I | GATC | 3 cut(s) | 427, 499, 525 |
| LmnI | GCTCC | 1 cut(s) | 103 |
| Lsp1109I | GCAGC | 1 cut(s) | 255 |
| LweI | GCATC | 1 cut(s) | 143 |
| MaeII | ACGT | 4 cut(s) | 66, 129, 538, 601 |
| MaeIII | GTNAC | 4 cut(s) | 181, 362, 436, 479 |
| MalI | GATC | 3 cut(s) | 429, 501, 527 |
| MboI | GATC | 3 cut(s) | 427, 499, 525 |
| MboII | GAAGA | 2 cut(s) | 83, 333 |
| MflI | RGATCY | 1 cut(s) | 499 |
| MhlI | GDGCHC | 1 cut(s) | 108 |
| MluCI | AATT | 1 cut(s) | 81 |
| MlyI | GAGTC | 1 cut(s) | 265 |
| MmeI | TCCRAC | 1 cut(s) | 268 |
| MnlI | CCTC | 6 cut(s) | 105, 357, 381, 452, 513, 527 |
| MroXI | GAANNNNTTC | 1 cut(s) | 573 |
| MspI | CCGG | 2 cut(s) | 56, 310 |
| MspR9I | CCNGG | 3 cut(s) | 56, 57, 626 |
| MvaI | CCWGG | 1 cut(s) | 626 |
| MvnI | CGCG | 1 cut(s) | 91 |
| NciI | CCSGG | 2 cut(s) | 56, 57 |
| NdeII | GATC | 3 cut(s) | 427, 499, 525 |
| NlaIII | CATG | 2 cut(s) | 473, 563 |
| NlaIV | GGNNCC | 2 cut(s) | 53, 501 |
| NmuCI | GTSAC | 3 cut(s) | 362, 436, 479 |
| PaqCI | CACCTGC | 1 cut(s) | 508 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 408 |
| PdmI | GAANNNNTTC | 1 cut(s) | 573 |
| PfeI | GAWTC | 2 cut(s) | 357, 552 |
| PflFI | GACNNNGTC | 2 cut(s) | 239, 249 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 208, 520 |
| PkrI | GCNGC | 1 cut(s) | 270 |
| PleI | GAGTC | 1 cut(s) | 264 |
| PpsI | GAGTC | 1 cut(s) | 264 |
| Psp6I | CCWGG | 1 cut(s) | 624 |
| PspEI | GGTNACC | 2 cut(s) | 181, 362 |
| PspFI | CCCAGC | 1 cut(s) | 208 |
| PspGI | CCWGG | 1 cut(s) | 624 |
| PspN4I | GGNNCC | 2 cut(s) | 53, 501 |
| PspPI | GGNCC | 1 cut(s) | 199 |
| PsuI | RGATCY | 1 cut(s) | 499 |
| PsyI | GACNNNGTC | 2 cut(s) | 239, 249 |
| RsaI | GTAC | 5 cut(s) | 53, 281, 338, 453, 558 |
| RsaNI | GTAC | 5 cut(s) | 52, 280, 337, 452, 557 |
| SatI | GCNGC | 1 cut(s) | 269 |
| Sau3AI | GATC | 3 cut(s) | 427, 499, 525 |
| Sau96I | GGNCC | 1 cut(s) | 199 |
| SchI | GAGTC | 1 cut(s) | 265 |
| ScrFI | CCNGG | 3 cut(s) | 56, 57, 626 |
| SduI | GDGCHC | 1 cut(s) | 108 |
| SfaNI | GCATC | 1 cut(s) | 143 |
| SinI | GGWCC | 1 cut(s) | 199 |
| SmaI | CCCGGG | 1 cut(s) | 57 |
| SmlI | CTYRAG | 1 cut(s) | 109 |
| SmoI | CTYRAG | 1 cut(s) | 109 |
| Sse9I | AATT | 1 cut(s) | 81 |
| SsiI | CCGC | 5 cut(s) | 49, 89, 288, 368, 637 |
| StyD4I | CCNGG | 3 cut(s) | 54, 55, 624 |
| TaaI | ACNGT | 3 cut(s) | 251, 436, 442 |
| TaiI | ACGT | 4 cut(s) | 69, 132, 541, 604 |
| TaqI | TCGA | 7 cut(s) | 69, 136, 234, 259, 349, 402, 657 |
| TaqII | GACCGA | 1 cut(s) | 350 |
| TasI | AATT | 1 cut(s) | 81 |
| TatI | WGTACW | 2 cut(s) | 279, 336 |
| TfiI | GAWTC | 2 cut(s) | 357, 552 |
| TscAI | CASTG | 1 cut(s) | 445 |
| TseFI | GTSAC | 3 cut(s) | 362, 436, 479 |
| TseI | GCWGC | 1 cut(s) | 268 |
| Tsp45I | GTSAC | 3 cut(s) | 362, 436, 479 |
| TspDTI | ATGAA | 4 cut(s) | 25, 156, 308, 576 |
| TspGWI | ACGGA | 1 cut(s) | 512 |
| TspMI | CCCGGG | 1 cut(s) | 55 |
| TspRI | CASTG | 1 cut(s) | 445 |
| Tth111I | GACNNNGTC | 2 cut(s) | 239, 249 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 208, 520 |
| VpaK11BI | GGWCC | 1 cut(s) | 199 |
| XapI | RAATTY | 1 cut(s) | 81 |
| XmaI | CCCGGG | 1 cut(s) | 55 |
| XmnI | GAANNNNTTC | 1 cut(s) | 573 |
| ZraI | GACGTC | 1 cut(s) | 130 |