Rmu_co8522915.1_g000004

B3 domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8522915.1
OG0000124
Physical Location & Seq
Forward (+)
14425 .. 16748
2324 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8522915.1_g000004.1.cds

Sequence Viewer

Length: 1299 bp
atgggtgatggtaatggaggatgtgggcacagagtccacaaagttaatggggaagatatgaactcattatatatggatgtggggcagggggtcttcaatttgaactggaggtgtgaaatggctaccccctcattacaacttccacacccagctgatatccccttctttgtgacgacggtggatactaccgggcccagaatgaagactttgaaaatacctgctgcttttcgagagcttcatttggcgactgatgatagcaaggaagcagttctgaagttagtcggattacctcataatgcatggaaagtggatgtcgttgaggcagacaatgataagtttttgggagtaggatgggagtggtttgtacggctcacttgcggggtacaaccaagggtggtactcgtcctcaaataccaaggatgtatgacatttagtgtcatacggttcggatataacggccaagtcctctactttcttccttggttgactgcaaccaacccttggaacaggcttgatcaaatatatgaaaattttcaggggtttgccgttaccgcatggggacctggaaacagccctgtaagcatcgaaggtgatggggccgttatggggaagataacttttcagatgtatcgcaacgaaggaccatactggatgacagaagctatcttcagtagcgagggactttttttcggtcatggatggcagcatttcgtcgacgccattgcactagacaggaataaatgtgcagtcttcaaatatcttggctatttggcattcagtgtcattgtttttgacttggaatttggaacagtagtgttgcctaatatgcatgatccaagaattgggggttcggaggaatggctgattgagccgagttcaattgaagcaggggtgggacactttcctaagcacgccggggaaggtatgtctaaccaggaaaacccggttggagacgtacataatgaatcagcggaagttttgtcatttccggaaaacgttgccgcgttaccgacttgcttattgacgatccaaaggggtcatggggttacggggaaatattgtgttgcgatatatagggcatttccaacatattttgcgaaatttcatcttggtggaagaccctcaagcctgactttacagaaggccacaggtggaacatggccggtaactacagctgccacaaatggaactctatatgtaagccggggttatgcaaatttcaaaaaagacaacaaattcaaaaccggagacttggtccgcgtattcctggtaggtgaaggcacattggagttcaactaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0007275 GO:0008150 GO:0009553 GO:0009566 GO:0009567 GO:0019953 GO:0022414 GO:0032501 GO:0032502 GO:0044703 GO:0048229 GO:0048856 GO:0051704
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B3

Protein Analysis

432

Amino Acids

47.82

Weight (kDa)

6.01

Isoelectric Point (pI)

24.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000124)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g10992 FvH4_2g25150 FvH4_2g27910 FvH4_2g27931 FvH4_4g09443 FvH4_4g09490 FvH4_4g15990 FvH4_4g15991 FvH4_6g07180 FvH4_6g40320 FvH4_7g10222 FvH4_7g10251
rosa_chinensis RchiOBHm_Chr2g0155611
rosa_laevigata RLG00000009253 RLG00000009254 RLG00000011848 RLG00000017301 RLG00000017302 RLG00000034909
rosa_multiflora Rmu_co8063658.1_g000001 Rmu_co8240443.1_g000001 Rmu_co8264451.1_g000001 Rmu_co8381937.1_g000001 Rmu_co8419903.1_g000001 Rmu_co8513405.1_g000002 Rmu_co8522915.1_g000001 Rmu_co8522915.1_g000004 Rmu_sc0000279.1_g000024 Rmu_sc0000279.1_g000048 Rmu_sc0000642.1_g000017 Rmu_sc0002045.1_g000015 Rmu_sc0002045.1_g000018 Rmu_sc0002045.1_g000023 Rmu_sc0002045.1_g000028 Rmu_sc0003047.1_g000008 Rmu_sc0003179.1_g000019 Rmu_sc0003179.1_g000020 Rmu_sc0003179.1_g000022 Rmu_sc0003179.1_g000023 Rmu_sc0003422.1_g000011 Rmu_sc0004999.1_g000014 Rmu_sc0005712.1_g000018 Rmu_sc0005712.1_g000023 Rmu_sc0006198.1_g000019 Rmu_sc0006373.1_g000005 Rmu_sc0006514.1_g000028 Rmu_sc0006514.1_g000031 Rmu_sc0007367.1_g000010 Rmu_sc0011475.1_g000002 Rmu_sc0025304.1_g000001 Rmu_ssc0000161.1_g000030 Rmu_ssc0000161.1_g000032 Rmu_ssc0000387.1_g000018
rosa_roxburghii Rroxscaffold_1G00031090 Rroxscaffold_1G00032770 Rroxscaffold_1G00068950 Rroxscaffold_1G00069000 Rroxscaffold_1G00069010 Rroxscaffold_2G00129060 Rroxscaffold_2G00129100 Rroxscaffold_4G00309310 Rroxscaffold_4G00309320 Rroxscaffold_5G00350620 Rroxscaffold_5G00350630 Rroxscaffold_7G00162650 Rroxscaffold_7G00162660 Rroxscaffold_7G00162710
rosa_rugosa Rorug02G0564700 Rorug02G0564700 Rorug03G0343100 Rorug04G0189700 Rorug05G0102800 Rorug05G0102900 Rorug05G0103000 Rorug05G0106500 Rorug05G0106600 Rorug05G0106700 Rorug05G0252800 Rorug07G0182100 Rorug07G0283500 Rorug07G0283600
rosa_samantha Rh1AG004000 Rh1AG004100 Rh1AG004200 Rh1AG004400 Rh1AG004500 Rh1AG004600 Rh1AG004800 Rh1AG004900 Rh1AG005300 Rh1AG007000 Rh1AG115000 Rh1CG049400 Rh1CG055400 Rh1CG111000 Rh1DG053600 Rh1DG053700 Rh1DG059300 Rh1DG119700 Rh1DG177100 Rh1DG177200 Rh2AG353800 Rh2AG354000 Rh2AG354100 Rh2AG354300 Rh2AG354400 Rh2AG354500 Rh2AG354600 Rh2AG354700 Rh2AG642300 Rh2AG642400 Rh2AG642500 Rh2BG336500 Rh2BG336600 Rh2BG336700 Rh2BG336800 Rh2BG336900 Rh2CG299900 Rh2CG300000 Rh2CG300100 Rh2DG337000 Rh2DG337100 Rh3AG246600 Rh3BG121900 Rh3BG122300 Rh3BG122600 Rh3BG122700 Rh3DG304800 Rh3DG304900 Rh4AG148800 Rh4AG249000 Rh4AG249100 Rh4AG249200 Rh4BG182700 Rh4BG182800 Rh4BG182900 Rh4BG254400 Rh4BG254500 Rh4BG254600 Rh4CG155500 Rh4CG155700 Rh4DG057900 Rh4DG058000 Rh4DG058100 Rh4DG058200 Rh4DG129100 Rh5AG364500 Rh5AG364600 Rh5AG364800 Rh5AG365300 Rh5CG363700 Rh5CG497600 Rh5DG239500 Rh5DG239600 Rh6AG173500 Rh6AG175400 Rh6BG075900 Rh6BG076300 Rh6BG076400 Rh6BG076500 Rh6BG076600 Rh6CG151000 Rh6CG151200 Rh6CG151300 Rh6CG151400 Rh6CG205200 Rh6CG205300 Rh6CG419700 Rh6CG419900 Rh6CG420100 Rh6DG498700 Rh6DG498800 Rh7AG329000 Rh7AG329100 Rh7AG329300 Rh7AG329400 Rh7AG353000 Rh7AG353100 Rh7AG353300 Rh7AG353400 Rh7AG353500 Rh7CG346400 Rh7CG346500 Rh7CG346700 Rh7CG370800 Rh7CG370900 Rh7CG371000 Rh7CG371100 Rh7DG325000 Rh7DG325100 Rh7DG325200 Rh7DG325300 Rh7DG353100 Rh7DG353200 Rh7DG353300 Rh7DG363500 Rh7DG364000
rosa_wichuraiana Rw0G002290 Rw0G012780 Rw1G000260 Rw1G000270 Rw1G010400 Rw1G010410 Rw1G010420 Rw1G010430 Rw1G010440 Rw2G003210 Rw2G003220 Rw4G010970 Rw5G048520 Rw6G013320 Rw6G013470 Rw6G014940 Rw6G016570 Rw6G016590 Rw6G016600 Rw6G016610 Rw6G016620 Rw6G035450 Rw7G027760 Rw7G030460

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 226
AccB7I CCANNNNNTGG 2 cut(s) 501, 842
AccI GTMKAC 1 cut(s) 714
AccII CGCG 2 cut(s) 1004, 1260
AccIII TCCGGA 1 cut(s) 988
AciI CCGC 5 cut(s) 378, 552, 971, 1002, 1258
AclI AACGTT 1 cut(s) 996
AclWI GGATC 2 cut(s) 827, 1021
AcoI YGGCCR 2 cut(s) 457, 1160
AcsI RAATTY 5 cut(s) 529, 800, 1100, 1216, 1235
AcuI CTGAAG 2 cut(s) 293, 652
AcyI GRCGYC 1 cut(s) 717
AfaI GTAC 4 cut(s) 366, 384, 399, 957
AfiI CCNNNNNNNGG 3 cut(s) 501, 606, 842
AgsI TTSAA 9 cut(s) 97, 103, 211, 754, 879, 884, 1222, 1240, 1294
AjnI CCWGG 3 cut(s) 562, 933, 1266
AjuI GAANNNNNNNTTGG 2 cut(s) 930, 962
AluBI AGCT 4 cut(s) 152, 235, 662, 1175
AluI AGCT 4 cut(s) 152, 235, 662, 1175
Alw26I GTCTC 2 cut(s) 945, 1242
AlwI GGATC 2 cut(s) 827, 1021
Aor13HI TCCGGA 1 cut(s) 988
AoxI GGCC 5 cut(s) 191, 457, 597, 1143, 1160
ApaI GGGCCC 1 cut(s) 195
ApeKI GCWGC 3 cut(s) 221, 703, 1175
ApoI RAATTY 5 cut(s) 529, 800, 1100, 1216, 1235
ArsI GACNNNNNNTTYG 2 cut(s) 785, 817
Asp700I GAANNNNTTC 2 cut(s) 267, 531
AspS9I GGNCC 6 cut(s) 191, 192, 560, 597, 641, 1255
AsuC2I CCSGG 4 cut(s) 190, 916, 944, 1205
AsuHPI GGTGA 3 cut(s) 17, 602, 1286
AvaII GGWCC 3 cut(s) 560, 641, 1255
BaeGI GKGCMC 2 cut(s) 30, 195
BanII GRGCYC 1 cut(s) 195
BbsI GAAGAC 4 cut(s) 85, 209, 742, 1123
BbvI GCAGC 3 cut(s) 208, 715, 1162
BccI CCATC 4 cut(s) 2, 345, 587, 693
BceAI ACGGC 4 cut(s) 383, 472, 530, 584
BcgI CGANNNNNNTGC 2 cut(s) 704, 738
BciT130I CCWGG 3 cut(s) 564, 935, 1268
BciVI GTATCC 1 cut(s) 175
BclI TGATCA 1 cut(s) 514
BcnI CCSGG 4 cut(s) 190, 916, 944, 1205
BcoDI GTCTC 2 cut(s) 945, 1242
BfaI CTAG 1 cut(s) 728
BfmI CTRYAG 1 cut(s) 1170
BfuAI ACCTGC 1 cut(s) 226
BfuI GTATCC 1 cut(s) 175
BisI GCNGC 4 cut(s) 222, 704, 1002, 1176
BlsI GCNGC 4 cut(s) 223, 705, 1003, 1177
Bme1390I CCNGG 7 cut(s) 190, 564, 916, 935, 944, 1205, 1268
Bme18I GGWCC 3 cut(s) 560, 641, 1255
BmgT120I GGNCC 6 cut(s) 191, 192, 560, 597, 641, 1255
BmiI GGNNCC 3 cut(s) 193, 561, 598
BmrFI CCNGG 7 cut(s) 190, 564, 916, 935, 944, 1205, 1268
BmsI GCATC 1 cut(s) 591
BpiI GAAGAC 4 cut(s) 85, 209, 742, 1123
BpmI CTGGAG 1 cut(s) 127
Bpu10I CCTNAGC 1 cut(s) 906
BpuEI CTTGAG 1 cut(s) 1108
BpuMI CCSGG 4 cut(s) 190, 916, 944, 1205
BsaHI GRCGYC 1 cut(s) 717
BsaJI CCNNGG 6 cut(s) 389, 415, 479, 500, 915, 1204
BsaWI WCCGGW 2 cut(s) 988, 1244
BsaXI ACNNNNNCTCC 2 cut(s) 1239, 1269
Bsc4I CCNNNNNNNGG 3 cut(s) 501, 606, 842
Bse118I RCCGGY 1 cut(s) 1162
Bse1I ACTGG 2 cut(s) 110, 653
Bse3DI GCAATG 1 cut(s) 720
BseAI TCCGGA 1 cut(s) 988
BseBI CCWGG 3 cut(s) 564, 935, 1268
BseDI CCNNGG 6 cut(s) 389, 415, 479, 500, 915, 1204
BseGI GGATG 7 cut(s) 26, 82, 316, 356, 425, 657, 704
BseLI CCNNNNNNNGG 3 cut(s) 501, 606, 842
BseMI GCAATG 1 cut(s) 720
BseNI ACTGG 2 cut(s) 110, 653
BseSI GKGCMC 2 cut(s) 30, 195
BseXI GCAGC 3 cut(s) 208, 715, 1162
BseYI CCCAGC 1 cut(s) 148
BsgI GTGCAG 1 cut(s) 765
Bsh1236I CGCG 2 cut(s) 1004, 1260
BshFI GGCC 5 cut(s) 193, 459, 599, 1145, 1162
BsiSI CCGG 7 cut(s) 189, 915, 944, 989, 1163, 1204, 1245
BslFI GGGAC 3 cut(s) 573, 693, 909
BslI CCNNNNNNNGG 3 cut(s) 501, 606, 842
BsmAI GTCTC 2 cut(s) 945, 1242
BsmBI CGTCTC 1 cut(s) 945
BsmFI GGGAC 3 cut(s) 573, 693, 909
BsmI GAATGC 1 cut(s) 773
BsnI GGCC 5 cut(s) 193, 459, 599, 1145, 1162
Bsp120I GGGCCC 1 cut(s) 191
Bsp1286I GDGCHC 2 cut(s) 30, 195
Bsp13I TCCGGA 1 cut(s) 988
Bsp143I GATC 3 cut(s) 514, 832, 1026
BspACI CCGC 5 cut(s) 378, 552, 971, 1002, 1258
BspANI GGCC 5 cut(s) 193, 459, 599, 1145, 1162
BspEI TCCGGA 1 cut(s) 988
BspFNI CGCG 2 cut(s) 1004, 1260
BspLI GGNNCC 3 cut(s) 193, 561, 598
BspMI ACCTGC 1 cut(s) 226
BspPI GGATC 2 cut(s) 827, 1021
BsrDI GCAATG 1 cut(s) 720
BsrFI RCCGGY 1 cut(s) 1162
BsrI ACTGG 2 cut(s) 110, 653
BssAI RCCGGY 1 cut(s) 1162
BssECI CCNNGG 6 cut(s) 389, 415, 479, 500, 915, 1204
BssMI GATC 3 cut(s) 514, 832, 1026
BssNI GRCGYC 1 cut(s) 717
BssT1I CCWWGG 4 cut(s) 389, 415, 479, 500
Bst2UI CCWGG 3 cut(s) 564, 935, 1268
Bst4CI ACNGT 3 cut(s) 178, 444, 811
BstACI GRCGYC 1 cut(s) 717
BstC8I GCNNGC 1 cut(s) 912
BstDEI CTNAG 1 cut(s) 906
BstF5I GGATG 7 cut(s) 26, 82, 316, 356, 425, 657, 704
BstFNI CGCG 2 cut(s) 1004, 1260
BstKTI GATC 3 cut(s) 517, 835, 1029
BstMAI GTCTC 2 cut(s) 945, 1242
BstMBI GATC 3 cut(s) 514, 832, 1026
BstMWI GCNNNNNNNGC 4 cut(s) 551, 579, 826, 868
BstNI CCWGG 3 cut(s) 564, 935, 1268
BstSCI CCNGG 7 cut(s) 188, 562, 914, 933, 942, 1203, 1266
BstSFI CTRYAG 1 cut(s) 1170
BstSLI GKGCMC 2 cut(s) 30, 195
BstUI CGCG 2 cut(s) 1004, 1260
BstV1I GCAGC 3 cut(s) 208, 715, 1162
BstV2I GAAGAC 4 cut(s) 85, 209, 742, 1123
BsuI GTATCC 1 cut(s) 175
BsuRI GGCC 5 cut(s) 193, 459, 599, 1145, 1162
BtsCI GGATG 7 cut(s) 26, 82, 316, 356, 425, 657, 704
BtsIMutI CAGTG 1 cut(s) 784
BveI ACCTGC 1 cut(s) 226
Cac8I GCNNGC 1 cut(s) 912
Cfr10I RCCGGY 1 cut(s) 1162
Cfr13I GGNCC 6 cut(s) 191, 192, 560, 597, 641, 1255
CseI GACGC 1 cut(s) 725
Csp6I GTAC 4 cut(s) 365, 383, 398, 956
CviAII CATG 6 cut(s) 300, 555, 695, 830, 1040, 1158
CviQI GTAC 4 cut(s) 365, 383, 398, 956
DdeI CTNAG 1 cut(s) 906
DpnI GATC 3 cut(s) 516, 834, 1028
DpnII GATC 3 cut(s) 514, 832, 1026
EaeI YGGCCR 2 cut(s) 457, 1160
Eco130I CCWWGG 4 cut(s) 389, 415, 479, 500
Eco24I GRGCYC 1 cut(s) 195
Eco32I GATATC 1 cut(s) 157
Eco47I GGWCC 3 cut(s) 560, 641, 1255
Eco57I CTGAAG 2 cut(s) 293, 652
EcoO109I RGGNCCY 1 cut(s) 560
EcoRII CCWGG 3 cut(s) 562, 933, 1266
EcoRV GATATC 1 cut(s) 157
EcoT14I CCWWGG 4 cut(s) 389, 415, 479, 500
EcoT22I ATGCAT 2 cut(s) 301, 831
EcoT38I GRGCYC 1 cut(s) 195
ErhI CCWWGG 4 cut(s) 389, 415, 479, 500
Esp3I CGTCTC 1 cut(s) 945
FaeI CATG 6 cut(s) 303, 558, 698, 833, 1043, 1161
FalI AAGNNNNNCTT 2 cut(s) 1117, 1149
FaqI GGGAC 3 cut(s) 573, 693, 909
FatI CATG 6 cut(s) 299, 554, 694, 829, 1039, 1157
FauI CCCGC 1 cut(s) 371
FbaI TGATCA 1 cut(s) 514
FblI GTMKAC 1 cut(s) 714
Fnu4HI GCNGC 4 cut(s) 222, 704, 1002, 1176
FokI GGATG 7 cut(s) 33, 89, 323, 363, 432, 664, 711
FriOI GRGCYC 1 cut(s) 195
Fsp4HI GCNGC 4 cut(s) 222, 704, 1002, 1176
FspBI CTAG 1 cut(s) 728
GluI GCNGC 4 cut(s) 222, 704, 1002, 1176
GsaI CCCAGC 1 cut(s) 152
GsuI CTGGAG 1 cut(s) 127
HaeIII GGCC 5 cut(s) 193, 459, 599, 1145, 1162
HapII CCGG 7 cut(s) 189, 915, 944, 989, 1163, 1204, 1245
HgaI GACGC 1 cut(s) 725
Hin1I GRCGYC 1 cut(s) 717
Hin1II CATG 6 cut(s) 303, 558, 698, 833, 1043, 1161
HincII GTYRAC 2 cut(s) 486, 715
HindII GTYRAC 2 cut(s) 486, 715
HinfI GANTC 2 cut(s) 33, 965
HpaII CCGG 7 cut(s) 189, 915, 944, 989, 1163, 1204, 1245
HphI GGTGA 3 cut(s) 17, 602, 1286
Hpy166II GTNNAC 3 cut(s) 37, 486, 715
Hpy188I TCNGA 5 cut(s) 273, 284, 449, 624, 853
Hpy188III TCNNGA 2 cut(s) 230, 989
Hpy8I GTNNAC 3 cut(s) 37, 486, 715
Hpy99I CGWCG 3 cut(s) 178, 716, 719
HpyAV CCTTC 6 cut(s) 172, 581, 632, 914, 1135, 1271
HpyCH4III ACNGT 3 cut(s) 178, 444, 811
HpyCH4IV ACGT 2 cut(s) 954, 996
HpyCH4V TGCA 6 cut(s) 299, 491, 725, 746, 829, 1214
HpyF10VI GCNNNNNNNGC 4 cut(s) 551, 579, 826, 868
HpyF3I CTNAG 1 cut(s) 906
HpySE526I ACGT 2 cut(s) 954, 996
Hsp92I GRCGYC 1 cut(s) 717
Hsp92II CATG 6 cut(s) 303, 558, 698, 833, 1043, 1161
Kpn2I TCCGGA 1 cut(s) 988
Ksp22I TGATCA 1 cut(s) 514
Kzo9I GATC 3 cut(s) 514, 832, 1026
Lsp1109I GCAGC 3 cut(s) 208, 715, 1162
LweI GCATC 1 cut(s) 591
MaeI CTAG 1 cut(s) 728
MaeII ACGT 2 cut(s) 954, 996
MaeIII GTNAC 5 cut(s) 169, 547, 1005, 1045, 1165
MalI GATC 3 cut(s) 516, 834, 1028
MboI GATC 3 cut(s) 514, 832, 1026
MboII GAAGA 8 cut(s) 65, 85, 214, 467, 622, 658, 742, 1128
MfeI CAATTG 1 cut(s) 879
MhlI GDGCHC 2 cut(s) 30, 195
MluCI AATT 8 cut(s) 97, 529, 800, 840, 879, 1100, 1216, 1235
MlyI GAGTC 1 cut(s) 42
MmeI TCCRAC 3 cut(s) 262, 928, 1109
Mph1103I ATGCAT 2 cut(s) 301, 831
MroI TCCGGA 1 cut(s) 988
MroXI GAANNNNTTC 2 cut(s) 267, 531
MseI TTAA 1 cut(s) 45
MslI CAYNNNNRTG 1 cut(s) 1110
MspA1I CMGCKG 3 cut(s) 152, 971, 1175
MspI CCGG 7 cut(s) 189, 915, 944, 989, 1163, 1204, 1245
MspR9I CCNGG 7 cut(s) 190, 564, 916, 935, 944, 1205, 1268
MunI CAATTG 1 cut(s) 879
Mva1269I GAATGC 1 cut(s) 773
MvaI CCWGG 3 cut(s) 564, 935, 1268
MvnI CGCG 2 cut(s) 1004, 1260
MwoI GCNNNNNNNGC 4 cut(s) 551, 579, 826, 868
NciI CCSGG 4 cut(s) 190, 916, 944, 1205
NdeII GATC 3 cut(s) 514, 832, 1026
NlaIII CATG 6 cut(s) 303, 558, 698, 833, 1043, 1161
NlaIV GGNNCC 3 cut(s) 193, 561, 598
NmeAIII GCCGAG 1 cut(s) 897
NmuCI GTSAC 1 cut(s) 169
NsiI ATGCAT 2 cut(s) 301, 831
PctI GAATGC 1 cut(s) 773
PdmI GAANNNNTTC 2 cut(s) 267, 531
PfeI GAWTC 1 cut(s) 965
PflFI GACNNNGTC 1 cut(s) 1253
PflMI CCANNNNNTGG 2 cut(s) 501, 842
PkrI GCNGC 4 cut(s) 223, 705, 1003, 1177
PleI GAGTC 1 cut(s) 41
PpsI GAGTC 1 cut(s) 41
PpuMI RGGWCCY 1 cut(s) 560
Psp1406I AACGTT 1 cut(s) 996
Psp5II RGGWCCY 1 cut(s) 560
Psp6I CCWGG 3 cut(s) 562, 933, 1266
PspFI CCCAGC 1 cut(s) 148
PspGI CCWGG 3 cut(s) 562, 933, 1266
PspN4I GGNNCC 3 cut(s) 193, 561, 598
PspOMI GGGCCC 1 cut(s) 191
PspPI GGNCC 6 cut(s) 191, 192, 560, 597, 641, 1255
PspPPI RGGWCCY 1 cut(s) 560
PsyI GACNNNGTC 1 cut(s) 1253
PvuII CAGCTG 2 cut(s) 152, 1175
RsaI GTAC 4 cut(s) 366, 384, 399, 957
RsaNI GTAC 4 cut(s) 365, 383, 398, 956
RseI CAYNNNNRTG 1 cut(s) 1110
SalI GTCGAC 1 cut(s) 713
SaqAI TTAA 1 cut(s) 45
SatI GCNGC 4 cut(s) 222, 704, 1002, 1176
Sau3AI GATC 3 cut(s) 514, 832, 1026
Sau96I GGNCC 6 cut(s) 191, 192, 560, 597, 641, 1255
SchI GAGTC 1 cut(s) 42
ScrFI CCNGG 7 cut(s) 190, 564, 916, 935, 944, 1205, 1268
SduI GDGCHC 2 cut(s) 30, 195
SfaNI GCATC 1 cut(s) 591
SfcI CTRYAG 1 cut(s) 1170
SgrDI CGTCGACG 1 cut(s) 713
SinI GGWCC 3 cut(s) 560, 641, 1255
SmiMI CAYNNNNRTG 1 cut(s) 1110
SmlI CTYRAG 1 cut(s) 1123
SmoI CTYRAG 1 cut(s) 1123
Sse9I AATT 8 cut(s) 97, 529, 800, 840, 879, 1100, 1216, 1235
SsiI CCGC 5 cut(s) 378, 552, 971, 1002, 1258
SspI AATATT 1 cut(s) 1058
SspMI CTAG 1 cut(s) 728
StyD4I CCNGG 7 cut(s) 188, 562, 914, 933, 942, 1203, 1266
StyI CCWWGG 4 cut(s) 389, 415, 479, 500
TaaI ACNGT 3 cut(s) 178, 444, 811
TaiI ACGT 2 cut(s) 957, 999
TaqI TCGA 3 cut(s) 229, 585, 714
TaqII GACCGA 1 cut(s) 680
TasI AATT 8 cut(s) 97, 529, 800, 840, 879, 1100, 1216, 1235
TauI GCSGC 1 cut(s) 1004
TfiI GAWTC 1 cut(s) 965
Tru1I TTAA 1 cut(s) 45
Tru9I TTAA 1 cut(s) 45
TscAI CASTG 1 cut(s) 784
TseFI GTSAC 1 cut(s) 169
TseI GCWGC 3 cut(s) 221, 703, 1175
Tsp45I GTSAC 1 cut(s) 169
TspDTI ATGAA 6 cut(s) 74, 215, 227, 540, 978, 1094
TspRI CASTG 1 cut(s) 784
Tth111I GACNNNGTC 1 cut(s) 1253
Van91I CCANNNNNTGG 2 cut(s) 501, 842
VpaK11BI GGWCC 3 cut(s) 560, 641, 1255
XapI RAATTY 5 cut(s) 529, 800, 1100, 1216, 1235
XcmI CCANNNNNNNNNTGG 2 cut(s) 44, 1037
XmiI GTMKAC 1 cut(s) 714
XmnI GAANNNNTTC 2 cut(s) 267, 531
XspI CTAG 1 cut(s) 728
Zsp2I ATGCAT 2 cut(s) 301, 831
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.