Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0000124

Physical Location & Seq

Genomic Coordinates Forward (+)

84367943 .. 84369176

Gene Structure 1234 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G048520.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 963 bp

ATGTTTGACCCATGCTTCATTGTTGTTGTTCGGTACCCGGGACAGAACGTCGAAAAAACGAAAATTCCACCCCTGTTCAGTAGGCATCACTTGCAGGACGATGACACTGACGTCGCTCGACTGGTCTTGGATGGATCACGGAAGTGCTCATACTATGTCGAAATTATGCGACAAGGGCGCGACCATTGGCTCGGTTCTGGTTGGGAGAGTTTTTTGGACAATGTCCGAGCCGGTCACGGTCGAATGGTGCTGCTACTCCAGTACAGAGGCCTCATGAAGTTCCTTGTGCGCAGGTACGATGTCAACGGGGCTTTGATGTACGCTTCTCCCCGACCCCGATTTGGTTGCCCACCTCCCAAATCACCGACTATTTCAGGGGTATCGGACGGCTTCGTTTCGGACGTTTGGGATGACAGCGTCACTGTGCCTGTTGTACCAAGAGGTGTCATGCATGATAGACTCATTGCGGATGGGGCCCCTGCTCGGTGTGAACTCCAATGGGAGACCGTGCCTCCATGCCTCCAGCAGGTCGACATTACAGGAGGACGTAGGAAGCTGCGGTTCGCTTCTGCGTGGGAACGATTTCACTTCGAGAATCGGTTCGACAAACGACGGTGCTGTGTGTTCACCTACTTGGGAAATCTACGTTTCTCCGTTCTTGTGTTCGACACTGTTCGAGGGAACATGTGCACGACGCCGCTGCAATACACCCATGCTCCGGCTGTGGCCCCACATTTTAGGGGTAACCAGCACATGCAGGGTAATGACGAGGCTGAGGAGGACCATATGGATGCGGATGGGGCACAGGGGGAAGAAGACGAGGAACGGATCCCGGATCAGGATGTTGAAGATGAAGACGAGGAACCTCTTGTGGAACGGGTGAACCCAGGATGGCGTACTTTCAGGTCCGACAAATGCACAATTCAAAGATGTCACGGTGTACGTATTTTGGTACAATATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016553 GO:0016554 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR

Protein Analysis

320

Amino Acids

36.79

Weight (kDa)

5.9

Isoelectric Point (pI)

47.16

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000124)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g10992 FvH4_2g25150 FvH4_2g27910 FvH4_2g27931 FvH4_4g09443 FvH4_4g09490 FvH4_4g15990 FvH4_4g15991 FvH4_6g07180 FvH4_6g40320 FvH4_7g10222 FvH4_7g10251
rosa_chinensis	RchiOBHm_Chr2g0155611
rosa_laevigata	RLG00000009253 RLG00000009254 RLG00000011848 RLG00000017301 RLG00000017302 RLG00000034909
rosa_multiflora	Rmu_co8063658.1_g000001 Rmu_co8240443.1_g000001 Rmu_co8264451.1_g000001 Rmu_co8381937.1_g000001 Rmu_co8419903.1_g000001 Rmu_co8513405.1_g000002 Rmu_co8522915.1_g000001 Rmu_co8522915.1_g000004 Rmu_sc0000279.1_g000024 Rmu_sc0000279.1_g000048 Rmu_sc0000642.1_g000017 Rmu_sc0002045.1_g000015 Rmu_sc0002045.1_g000018 Rmu_sc0002045.1_g000023 Rmu_sc0002045.1_g000028 Rmu_sc0003047.1_g000008 Rmu_sc0003179.1_g000019 Rmu_sc0003179.1_g000020 Rmu_sc0003179.1_g000022 Rmu_sc0003179.1_g000023 Rmu_sc0003422.1_g000011 Rmu_sc0004999.1_g000014 Rmu_sc0005712.1_g000018 Rmu_sc0005712.1_g000023 Rmu_sc0006198.1_g000019 Rmu_sc0006373.1_g000005 Rmu_sc0006514.1_g000028 Rmu_sc0006514.1_g000031 Rmu_sc0007367.1_g000010 Rmu_sc0011475.1_g000002 Rmu_sc0025304.1_g000001 Rmu_ssc0000161.1_g000030 Rmu_ssc0000161.1_g000032 Rmu_ssc0000387.1_g000018
rosa_roxburghii	Rroxscaffold_1G00031090 Rroxscaffold_1G00032770 Rroxscaffold_1G00068950 Rroxscaffold_1G00069000 Rroxscaffold_1G00069010 Rroxscaffold_2G00129060 Rroxscaffold_2G00129100 Rroxscaffold_4G00309310 Rroxscaffold_4G00309320 Rroxscaffold_5G00350620 Rroxscaffold_5G00350630 Rroxscaffold_7G00162650 Rroxscaffold_7G00162660 Rroxscaffold_7G00162710
rosa_rugosa	Rorug02G0564700 Rorug02G0564700 Rorug03G0343100 Rorug04G0189700 Rorug05G0102800 Rorug05G0102900 Rorug05G0103000 Rorug05G0106500 Rorug05G0106600 Rorug05G0106700 Rorug05G0252800 Rorug07G0182100 Rorug07G0283500 Rorug07G0283600
rosa_samantha	Rh1AG004000 Rh1AG004100 Rh1AG004200 Rh1AG004400 Rh1AG004500 Rh1AG004600 Rh1AG004800 Rh1AG004900 Rh1AG005300 Rh1AG007000 Rh1AG115000 Rh1CG049400 Rh1CG055400 Rh1CG111000 Rh1DG053600 Rh1DG053700 Rh1DG059300 Rh1DG119700 Rh1DG177100 Rh1DG177200 Rh2AG353800 Rh2AG354000 Rh2AG354100 Rh2AG354300 Rh2AG354400 Rh2AG354500 Rh2AG354600 Rh2AG354700 Rh2AG642300 Rh2AG642400 Rh2AG642500 Rh2BG336500 Rh2BG336600 Rh2BG336700 Rh2BG336800 Rh2BG336900 Rh2CG299900 Rh2CG300000 Rh2CG300100 Rh2DG337000 Rh2DG337100 Rh3AG246600 Rh3BG121900 Rh3BG122300 Rh3BG122600 Rh3BG122700 Rh3DG304800 Rh3DG304900 Rh4AG148800 Rh4AG249000 Rh4AG249100 Rh4AG249200 Rh4BG182700 Rh4BG182800 Rh4BG182900 Rh4BG254400 Rh4BG254500 Rh4BG254600 Rh4CG155500 Rh4CG155700 Rh4DG057900 Rh4DG058000 Rh4DG058100 Rh4DG058200 Rh4DG129100 Rh5AG364500 Rh5AG364600 Rh5AG364800 Rh5AG365300 Rh5CG363700 Rh5CG497600 Rh5DG239500 Rh5DG239600 Rh6AG173500 Rh6AG175400 Rh6BG075900 Rh6BG076300 Rh6BG076400 Rh6BG076500 Rh6BG076600 Rh6CG151000 Rh6CG151200 Rh6CG151300 Rh6CG151400 Rh6CG205200 Rh6CG205300 Rh6CG419700 Rh6CG419900 Rh6CG420100 Rh6DG498700 Rh6DG498800 Rh7AG329000 Rh7AG329100 Rh7AG329300 Rh7AG329400 Rh7AG353000 Rh7AG353100 Rh7AG353300 Rh7AG353400 Rh7AG353500 Rh7CG346400 Rh7CG346500 Rh7CG346700 Rh7CG370800 Rh7CG370900 Rh7CG371000 Rh7CG371100 Rh7DG325000 Rh7DG325100 Rh7DG325200 Rh7DG325300 Rh7DG353100 Rh7DG353200 Rh7DG353300 Rh7DG363500 Rh7DG364000
rosa_wichuraiana	Rw0G002290 Rw0G012780 Rw1G000260 Rw1G000270 Rw1G010400 Rw1G010410 Rw1G010420 Rw1G010430 Rw1G010440 Rw2G003210 Rw2G003220 Rw4G010970 Rw5G048520 Rw6G013320 Rw6G013470 Rw6G014940 Rw6G016570 Rw6G016590 Rw6G016600 Rw6G016610 Rw6G016620 Rw6G035450 Rw7G027760 Rw7G030460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	110
AatII	GACGTC	1 cut(s)	114
Acc16I	TGCGCA	1 cut(s)	290
Acc36I	ACCTGC	2 cut(s)	282, 517
Acc65I	GGTACC	1 cut(s)	33
AccB1I	GGYRCC	1 cut(s)	33
AccI	GTMKAC	1 cut(s)	531
AccII	CGCG	1 cut(s)	180
AciI	CCGC	4 cut(s)	467, 559, 698, 794
AclWI	GGATC	4 cut(s)	142, 823, 836, 843
AcsI	RAATTY	1 cut(s)	63
AcyI	GRCGYC	2 cut(s)	111, 695
AfaI	GTAC	8 cut(s)	35, 263, 296, 320, 435, 898, 942, 954
AfiI	CCNNNNNNNGG	5 cut(s)	341, 483, 526, 718, 838
AflIII	ACRYGT	1 cut(s)	684
AgsI	TTSAA	2 cut(s)	848, 926
AhdI	GACNNNNNGTC	1 cut(s)	47
AjnI	CCWGG	1 cut(s)	886
AleI	CACNNNNGTG	1 cut(s)	142
AluBI	AGCT	1 cut(s)	556
AluI	AGCT	1 cut(s)	556
Alw21I	GWGCWC	2 cut(s)	149, 692
Alw26I	GTCTC	1 cut(s)	497
Alw44I	GTGCAC	1 cut(s)	688
AlwI	GGATC	4 cut(s)	142, 823, 836, 843
Ama87I	CYCGRG	1 cut(s)	37
AoxI	GGCC	3 cut(s)	268, 474, 726
ApaI	GGGCCC	1 cut(s)	478
ApaLI	GTGCAC	1 cut(s)	688
ApeKI	GCWGC	3 cut(s)	250, 556, 700
ApoI	RAATTY	1 cut(s)	63
Asp700I	GAANNNNTTC	2 cut(s)	582, 599
Asp718I	GGTACC	1 cut(s)	33
AspLEI	GCGC	2 cut(s)	180, 291
AspS9I	GGNCC	5 cut(s)	474, 475, 727, 781, 906
AsuC2I	CCSGG	3 cut(s)	38, 39, 833
AsuHPI	GGTGA	3 cut(s)	354, 619, 892
AvaI	CYCGRG	1 cut(s)	37
AvaII	GGWCC	2 cut(s)	781, 906
BaeGI	GKGCMC	3 cut(s)	478, 692, 805
BamHI	GGATCC	1 cut(s)	828
BanI	GGYRCC	1 cut(s)	33
BanII	GRGCYC	1 cut(s)	478
BarI	GAAGNNNNNNTAC	2 cut(s)	134, 166
BbsI	GAAGAC	2 cut(s)	822, 861
Bbv12I	GWGCWC	2 cut(s)	149, 692
BbvCI	CCTCAGC	1 cut(s)	774
BbvI	GCAGC	3 cut(s)	237, 543, 687
BccI	CCATC	4 cut(s)	125, 464, 791, 885
BceAI	ACGGC	1 cut(s)	403
BcgI	CGANNNNNNTGC	4 cut(s)	327, 361, 682, 716
BciT130I	CCWGG	1 cut(s)	888
BcnI	CCSGG	3 cut(s)	38, 39, 833
BcoDI	GTCTC	1 cut(s)	497
BfuAI	ACCTGC	2 cut(s)	282, 517
BisI	GCNGC	4 cut(s)	251, 557, 698, 701
BlsI	GCNGC	4 cut(s)	252, 558, 699, 702
Bme1390I	CCNGG	4 cut(s)	38, 39, 833, 888
Bme18I	GGWCC	2 cut(s)	781, 906
BmeRI	GACNNNNNGTC	1 cut(s)	47
BmeT110I	CYCGRG	1 cut(s)	37
BmgT120I	GGNCC	5 cut(s)	474, 475, 727, 781, 906
BmiI	GGNNCC	7 cut(s)	35, 475, 476, 477, 729, 830, 864
BmrFI	CCNGG	4 cut(s)	38, 39, 833, 888
BmsI	GCATC	2 cut(s)	94, 781
BpiI	GAAGAC	2 cut(s)	822, 861
BpmI	CTGGAG	2 cut(s)	242, 506
Bpu10I	CCTNAGC	1 cut(s)	774
BpuMI	CCSGG	3 cut(s)	38, 39, 833
BsaAI	YACGTR	1 cut(s)	944
BsaHI	GRCGYC	2 cut(s)	111, 695
BsaI	GGTCTC	1 cut(s)	497
BsaJI	CCNNGG	2 cut(s)	37, 886
BsaXI	ACNNNNNCTCC	4 cut(s)	496, 526, 700, 730
Bsc4I	CCNNNNNNNGG	5 cut(s)	341, 483, 526, 718, 838
Bse118I	RCCGGY	1 cut(s)	230
Bse1I	ACTGG	2 cut(s)	126, 259
Bse3DI	GCAATG	1 cut(s)	462
BseBI	CCWGG	1 cut(s)	888
BseDI	CCNNGG	2 cut(s)	37, 886
BseGI	GGATG	7 cut(s)	136, 415, 475, 796, 802, 847, 896
BseLI	CCNNNNNNNGG	5 cut(s)	341, 483, 526, 718, 838
BseMI	GCAATG	1 cut(s)	462
BseMII	CTCAG	1 cut(s)	765
BseNI	ACTGG	2 cut(s)	126, 259
BseRI	GAGGAG	1 cut(s)	791
BseSI	GKGCMC	3 cut(s)	478, 692, 805
BseXI	GCAGC	3 cut(s)	237, 543, 687
Bsh1236I	CGCG	1 cut(s)	180
Bsh1285I	CGRYCG	1 cut(s)	241
BshFI	GGCC	3 cut(s)	270, 476, 728
BshNI	GGYRCC	1 cut(s)	33
BsiEI	CGRYCG	1 cut(s)	241
BsiHKAI	GWGCWC	2 cut(s)	149, 692
BsiHKCI	CYCGRG	1 cut(s)	37
BsiSI	CCGG	4 cut(s)	38, 231, 719, 833
BslFI	GGGAC	1 cut(s)	54
BslI	CCNNNNNNNGG	5 cut(s)	341, 483, 526, 718, 838
BsmAI	GTCTC	1 cut(s)	497
BsmFI	GGGAC	1 cut(s)	54
BsnI	GGCC	3 cut(s)	270, 476, 728
Bso31I	GGTCTC	1 cut(s)	497
BsoBI	CYCGRG	1 cut(s)	37
Bsp120I	GGGCCC	1 cut(s)	474
Bsp1286I	GDGCHC	4 cut(s)	149, 478, 692, 805
Bsp143I	GATC	3 cut(s)	134, 828, 835
BspACI	CCGC	4 cut(s)	467, 559, 698, 794
BspANI	GGCC	3 cut(s)	270, 476, 728
BspCNI	CTCAG	1 cut(s)	766
BspFNI	CGCG	1 cut(s)	180
BspHI	TCATGA	1 cut(s)	273
BspLI	GGNNCC	7 cut(s)	35, 475, 476, 477, 729, 830, 864
BspMI	ACCTGC	2 cut(s)	282, 517
BspPI	GGATC	4 cut(s)	142, 823, 836, 843
BspT107I	GGYRCC	1 cut(s)	33
BspTNI	GGTCTC	1 cut(s)	497
BsrDI	GCAATG	1 cut(s)	462
BsrFI	RCCGGY	1 cut(s)	230
BsrI	ACTGG	2 cut(s)	126, 259
BssAI	RCCGGY	1 cut(s)	230
BssECI	CCNNGG	2 cut(s)	37, 886
BssMI	GATC	3 cut(s)	134, 828, 835
BssNI	GRCGYC	2 cut(s)	111, 695
Bst2UI	CCWGG	1 cut(s)	888
Bst4CI	ACNGT	6 cut(s)	239, 424, 508, 615, 673, 938
BstACI	GRCGYC	2 cut(s)	111, 695
BstAPI	GCANNNNNTGC	1 cut(s)	91
BstBAI	YACGTR	1 cut(s)	944
BstDEI	CTNAG	1 cut(s)	774
BstEII	GGTNACC	1 cut(s)	743
BstENI	CCTNNNNNAGG	1 cut(s)	524
BstF5I	GGATG	7 cut(s)	136, 415, 475, 796, 802, 847, 896
BstFNI	CGCG	1 cut(s)	180
BstHHI	GCGC	2 cut(s)	180, 291
BstKTI	GATC	3 cut(s)	137, 831, 838
BstMAI	GTCTC	1 cut(s)	497
BstMBI	GATC	3 cut(s)	134, 828, 835
BstMCI	CGRYCG	1 cut(s)	241
BstMWI	GCNNNNNNNGC	4 cut(s)	91, 175, 473, 800
BstNI	CCWGG	1 cut(s)	888
BstNSI	RCATGY	2 cut(s)	688, 757
BstPI	GGTNACC	1 cut(s)	743
BstSCI	CCNGG	4 cut(s)	36, 37, 831, 886
BstSLI	GKGCMC	3 cut(s)	478, 692, 805
BstSNI	TACGTA	1 cut(s)	944
BstUI	CGCG	1 cut(s)	180
BstV1I	GCAGC	3 cut(s)	237, 543, 687
BstV2I	GAAGAC	2 cut(s)	822, 861
BstX2I	RGATCY	1 cut(s)	828
BstYI	RGATCY	1 cut(s)	828
BsuRI	GGCC	3 cut(s)	270, 476, 728
BtsCI	GGATG	7 cut(s)	136, 415, 475, 796, 802, 847, 896
BtsIMutI	CAGTG	3 cut(s)	105, 420, 669
BveI	ACCTGC	2 cut(s)	282, 517
CciI	TCATGA	1 cut(s)	273
CfoI	GCGC	2 cut(s)	180, 291
Cfr10I	RCCGGY	1 cut(s)	230
Cfr13I	GGNCC	5 cut(s)	474, 475, 727, 781, 906
Cfr9I	CCCGGG	1 cut(s)	37
CseI	GACGC	2 cut(s)	406, 703
Csp6I	GTAC	8 cut(s)	34, 262, 295, 319, 434, 897, 941, 953
CviAII	CATG	8 cut(s)	12, 274, 448, 452, 516, 685, 713, 754
CviQI	GTAC	8 cut(s)	34, 262, 295, 319, 434, 897, 941, 953
DdeI	CTNAG	1 cut(s)	774
DpnI	GATC	3 cut(s)	136, 830, 837
DpnII	GATC	3 cut(s)	134, 828, 835
DrdI	GACNNNNNNGTC	1 cut(s)	110
DriI	GACNNNNNGTC	1 cut(s)	47
DseDI	GACNNNNNNGTC	1 cut(s)	110
Eam1105I	GACNNNNNGTC	1 cut(s)	47
Eco105I	TACGTA	1 cut(s)	944
Eco147I	AGGCCT	1 cut(s)	270
Eco24I	GRGCYC	1 cut(s)	478
Eco31I	GGTCTC	1 cut(s)	497
Eco47I	GGWCC	2 cut(s)	781, 906
Eco88I	CYCGRG	1 cut(s)	37
Eco91I	GGTNACC	1 cut(s)	743
EcoNI	CCTNNNNNAGG	1 cut(s)	524
EcoO109I	RGGNCCY	2 cut(s)	474, 475
EcoO65I	GGTNACC	1 cut(s)	743
EcoRII	CCWGG	1 cut(s)	886
EcoT22I	ATGCAT	1 cut(s)	453
EcoT38I	GRGCYC	1 cut(s)	478
FaeI	CATG	8 cut(s)	15, 277, 451, 455, 519, 688, 716, 757
FaqI	GGGAC	1 cut(s)	54
FatI	CATG	8 cut(s)	11, 273, 447, 451, 515, 684, 712, 753
FauNDI	CATATG	1 cut(s)	786
FblI	GTMKAC	1 cut(s)	531
Fnu4HI	GCNGC	4 cut(s)	251, 557, 698, 701
FokI	GGATG	7 cut(s)	143, 422, 482, 803, 809, 854, 903
FriOI	GRGCYC	1 cut(s)	478
Fsp4HI	GCNGC	4 cut(s)	251, 557, 698, 701
FspI	TGCGCA	1 cut(s)	290
GlaI	GCGC	2 cut(s)	179, 290
GluI	GCNGC	4 cut(s)	251, 557, 698, 701
GsuI	CTGGAG	2 cut(s)	242, 506
HaeIII	GGCC	3 cut(s)	270, 476, 728
HapII	CCGG	4 cut(s)	38, 231, 719, 833
HgaI	GACGC	2 cut(s)	406, 703
HhaI	GCGC	2 cut(s)	180, 291
Hin1I	GRCGYC	2 cut(s)	111, 695
Hin1II	CATG	8 cut(s)	15, 277, 451, 455, 519, 688, 716, 757
Hin6I	GCGC	2 cut(s)	178, 289
HinP1I	GCGC	2 cut(s)	178, 289
HincII	GTYRAC	2 cut(s)	304, 532
HindII	GTYRAC	2 cut(s)	304, 532
HinfI	GANTC	2 cut(s)	459, 595
HpaII	CCGG	4 cut(s)	38, 231, 719, 833
HphI	GGTGA	3 cut(s)	354, 619, 892
Hpy166II	GTNNAC	7 cut(s)	304, 491, 532, 627, 690, 883, 941
Hpy188I	TCNGA	4 cut(s)	227, 385, 400, 910
Hpy188III	TCNNGA	3 cut(s)	274, 592, 839
Hpy8I	GTNNAC	7 cut(s)	304, 491, 532, 627, 690, 883, 941
Hpy99I	CGWCG	4 cut(s)	53, 116, 615, 697
HpyCH4III	ACNGT	6 cut(s)	239, 424, 508, 615, 673, 938
HpyCH4IV	ACGT	6 cut(s)	48, 111, 402, 547, 646, 943
HpyCH4V	TGCA	6 cut(s)	94, 451, 690, 703, 757, 918
HpyF10VI	GCNNNNNNNGC	4 cut(s)	91, 175, 473, 800
HpyF3I	CTNAG	1 cut(s)	774
HpySE526I	ACGT	6 cut(s)	48, 111, 402, 547, 646, 943
Hsp92I	GRCGYC	2 cut(s)	111, 695
Hsp92II	CATG	8 cut(s)	15, 277, 451, 455, 519, 688, 716, 757
HspAI	GCGC	2 cut(s)	178, 289
KpnI	GGTACC	1 cut(s)	37
Kzo9I	GATC	3 cut(s)	134, 828, 835
LmnI	GCTCC	1 cut(s)	721
Lsp1109I	GCAGC	3 cut(s)	237, 543, 687
LweI	GCATC	2 cut(s)	94, 781
MaeII	ACGT	6 cut(s)	48, 111, 402, 547, 646, 943
MaeIII	GTNAC	4 cut(s)	233, 418, 743, 932
MalI	GATC	3 cut(s)	136, 830, 837
MboI	GATC	3 cut(s)	134, 828, 835
MboII	GAAGA	4 cut(s)	824, 827, 860, 866
MflI	RGATCY	1 cut(s)	828
MhlI	GDGCHC	4 cut(s)	149, 478, 692, 805
MluCI	AATT	3 cut(s)	63, 162, 921
MlyI	GAGTC	1 cut(s)	453
MmeI	TCCRAC	1 cut(s)	933
Mph1103I	ATGCAT	1 cut(s)	453
MroXI	GAANNNNTTC	2 cut(s)	582, 599
MslI	CAYNNNNRTG	2 cut(s)	142, 789
MspA1I	CMGCKG	1 cut(s)	700
MspI	CCGG	4 cut(s)	38, 231, 719, 833
MspR9I	CCNGG	4 cut(s)	38, 39, 833, 888
MvaI	CCWGG	1 cut(s)	888
MvnI	CGCG	1 cut(s)	180
MwoI	GCNNNNNNNGC	4 cut(s)	91, 175, 473, 800
NciI	CCSGG	3 cut(s)	38, 39, 833
NdeI	CATATG	1 cut(s)	786
NdeII	GATC	3 cut(s)	134, 828, 835
NlaIII	CATG	8 cut(s)	15, 277, 451, 455, 519, 688, 716, 757
NlaIV	GGNNCC	7 cut(s)	35, 475, 476, 477, 729, 830, 864
NmuCI	GTSAC	3 cut(s)	233, 418, 932
NsbI	TGCGCA	1 cut(s)	290
NsiI	ATGCAT	1 cut(s)	453
NspI	RCATGY	2 cut(s)	688, 757
OliI	CACNNNNGTG	1 cut(s)	142
PagI	TCATGA	1 cut(s)	273
PceI	AGGCCT	1 cut(s)	270
PciI	ACATGT	1 cut(s)	684
PcsI	WCGNNNNNNNCGW	1 cut(s)	399
PdmI	GAANNNNTTC	2 cut(s)	582, 599
PfeI	GAWTC	1 cut(s)	595
PflFI	GACNNNGTC	2 cut(s)	221, 416
PfoI	TCCNGGA	1 cut(s)	831
PkrI	GCNGC	4 cut(s)	252, 558, 699, 702
PleI	GAGTC	1 cut(s)	453
PpsI	GAGTC	1 cut(s)	453
Ppu21I	YACGTR	1 cut(s)	944
PscI	ACATGT	1 cut(s)	684
Psp6I	CCWGG	1 cut(s)	886
PspEI	GGTNACC	1 cut(s)	743
PspGI	CCWGG	1 cut(s)	886
PspN4I	GGNNCC	7 cut(s)	35, 475, 476, 477, 729, 830, 864
PspOMI	GGGCCC	1 cut(s)	474
PspPI	GGNCC	5 cut(s)	474, 475, 727, 781, 906
PsuI	RGATCY	1 cut(s)	828
PsyI	GACNNNGTC	2 cut(s)	221, 416
RsaI	GTAC	8 cut(s)	35, 263, 296, 320, 435, 898, 942, 954
RsaNI	GTAC	8 cut(s)	34, 262, 295, 319, 434, 897, 941, 953
RseI	CAYNNNNRTG	2 cut(s)	142, 789
SalI	GTCGAC	1 cut(s)	530
SatI	GCNGC	4 cut(s)	251, 557, 698, 701
Sau3AI	GATC	3 cut(s)	134, 828, 835
Sau96I	GGNCC	5 cut(s)	474, 475, 727, 781, 906
SchI	GAGTC	1 cut(s)	453
ScrFI	CCNGG	4 cut(s)	38, 39, 833, 888
SduI	GDGCHC	4 cut(s)	149, 478, 692, 805
SfaNI	GCATC	2 cut(s)	94, 781
SinI	GGWCC	2 cut(s)	781, 906
SmaI	CCCGGG	1 cut(s)	39
SmiMI	CAYNNNNRTG	2 cut(s)	142, 789
SnaBI	TACGTA	1 cut(s)	944
Sse9I	AATT	3 cut(s)	63, 162, 921
SseBI	AGGCCT	1 cut(s)	270
SsiI	CCGC	4 cut(s)	467, 559, 698, 794
SspI	AATATT	1 cut(s)	959
StuI	AGGCCT	1 cut(s)	270
StyD4I	CCNGG	4 cut(s)	36, 37, 831, 886
TaaI	ACNGT	6 cut(s)	239, 424, 508, 615, 673, 938
TaiI	ACGT	6 cut(s)	51, 114, 405, 550, 649, 946
TaqI	TCGA	9 cut(s)	51, 118, 159, 241, 531, 591, 603, 666, 676
TasI	AATT	3 cut(s)	63, 162, 921
TatI	WGTACW	1 cut(s)	261
TauI	GCSGC	1 cut(s)	700
TfiI	GAWTC	1 cut(s)	595
TscAI	CASTG	3 cut(s)	112, 427, 676
TseFI	GTSAC	3 cut(s)	233, 418, 932
TseI	GCWGC	3 cut(s)	250, 556, 700
Tsp45I	GTSAC	3 cut(s)	233, 418, 932
TspDTI	ATGAA	3 cut(s)	7, 290, 867
TspGWI	ACGGA	3 cut(s)	154, 643, 841
TspMI	CCCGGG	1 cut(s)	37
TspRI	CASTG	3 cut(s)	112, 427, 676
Tth111I	GACNNNGTC	2 cut(s)	221, 416
VneI	GTGCAC	1 cut(s)	688
VpaK11BI	GGWCC	2 cut(s)	781, 906
XagI	CCTNNNNNAGG	1 cut(s)	524
XapI	RAATTY	1 cut(s)	63
XceI	RCATGY	2 cut(s)	688, 757
XmaI	CCCGGG	1 cut(s)	37
XmiI	GTMKAC	1 cut(s)	531
XmnI	GAANNNNTTC	2 cut(s)	582, 599
ZraI	GACGTC	1 cut(s)	112
Zsp2I	ATGCAT	1 cut(s)	453

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.