Rh4BG182800

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4B
OG0000124
Physical Location & Seq
Forward (+)
32103301 .. 32110284
6984 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4BG182800.1

Sequence Viewer

Length: 1482 bp
ATGTGTTGTGCTCAATCGCAGCCCGCCATCCCAAGGGGTTGCCTATACGCTGCCATCTGCATTGATGGCGATCCAGGACCGTGTCTCTTAAGGTGGGATTCAAGGGAGGGGTTGATATTCTGGCATGTTGAGCTGACTAGAGGCGTAGGTTGCATGACTTTTGGTGAAGGGTGGAACAGATTTACCGCCCACAATCAACTGCTTGATGGAAAGCGGTTTTGTGTCTTCACTTACAGGGGTGGCCTTGAGTTCTCCGTCCTTGTTTTCCACAAACGGAGGGGTACCTTGATGATGAAGGTCAGCCAATTCGCTGCTGTGCCCCCTCCACAAGAATTTCCAGAGTTGCAGCAGGTCGATGAAAATGTCGCGGAAGAGCCAGGGATGCAGGAGGTAAATGCTGATGAGGTTGAGCAGGATATGGACATTGGCGGTGTAGAGGGGGCCGGTTTGGGGGCTTCTAGTAATGGGCCTGTGTACGAGGAGGTTGTCGGTGACTACCAACGCCTCCGTCATTGTGATGTCAGGATTCAGCAAGGTCATGGAGCATTTCTCACACATGATGCTCGTTCTCTGTTTCCTAGAAGGGGTTACGCATGTGTTAAGCTGCAAAGGTCAGACGGAGCCATGTGGGATATCGGGGTCGCGCATAGCAACGACACTCACTTCCTCACCAGGGGCTACAGTAAATTCAAGGAGGTAAATGGACTTCGCAGGGAGACTTCAGCGCGTTTGAGGAGGACATCCAACTGTAGGTGTAGAAAGGGTGTTTTATCTTCCACTCCACGATTCAAAGCCATATTACAGACTACAGAAAGAGCGATATCCCAAATCCGAAGGTGTGTCGGGCCAGGCAGTTCTTCATCCAAGATGACGGTGATGCGCGGTCCACTCTTCGGGGGAGGTGGAAACAACGAAGTATTGAAGAGATCCAGTCAACTGGTACCCGGAGATTTGGTGACCAAGTCCAGCATCCAGGAGTTCGTATTGAGCACCTGGGGTCTGTCCCCTGAAAAGGTGACTGCCATATCTGAACTGGGGCTTGCGAGTCTTCTGGATATTGGGTGCACCACCCAGGTCGGCCCTGTGTGGAGGTTGATGGTGCACAGCATTGACCTCTCAAACGACACCGTGTCCATTCACTGTCACAACTTCCCCGTCAATGCATTGGAGTTCAGCCGTATAATGAGAGTGCTTGACGGGGGTGCAGAGATTGAGCTGGGGGCTACCACAGACGCGGTAGAGTACGGTGTCTTTGTGCAGGACTTGTGCAACGGAGAAGGTCGGATACAGGTCTATCTGTTGAAGGAAATTGTCATGAACCGGGTTGATGTGGACGACATGTTCCGTATTGTATTTACAATGCTTGCATTGGCTCTGGTGCTGTGCCCAGGCACGGGTGACGACGTCGATCCGTCTTTGGTACTCCCACTTCTGGAGACGGGGGAGATTGGGAAGAAAAATTGGGCTTCATTCTGTGTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
HMG_box

Protein Analysis

493

Amino Acids

54.32

Weight (kDa)

6.04

Isoelectric Point (pI)

41.71

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000124)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g10992 FvH4_2g25150 FvH4_2g27910 FvH4_2g27931 FvH4_4g09443 FvH4_4g09490 FvH4_4g15990 FvH4_4g15991 FvH4_6g07180 FvH4_6g40320 FvH4_7g10222 FvH4_7g10251
rosa_chinensis RchiOBHm_Chr2g0155611
rosa_laevigata RLG00000009253 RLG00000009254 RLG00000011848 RLG00000017301 RLG00000017302 RLG00000034909
rosa_multiflora Rmu_co8063658.1_g000001 Rmu_co8240443.1_g000001 Rmu_co8264451.1_g000001 Rmu_co8381937.1_g000001 Rmu_co8419903.1_g000001 Rmu_co8513405.1_g000002 Rmu_co8522915.1_g000001 Rmu_co8522915.1_g000004 Rmu_sc0000279.1_g000024 Rmu_sc0000279.1_g000048 Rmu_sc0000642.1_g000017 Rmu_sc0002045.1_g000015 Rmu_sc0002045.1_g000018 Rmu_sc0002045.1_g000023 Rmu_sc0002045.1_g000028 Rmu_sc0003047.1_g000008 Rmu_sc0003179.1_g000019 Rmu_sc0003179.1_g000020 Rmu_sc0003179.1_g000022 Rmu_sc0003179.1_g000023 Rmu_sc0003422.1_g000011 Rmu_sc0004999.1_g000014 Rmu_sc0005712.1_g000018 Rmu_sc0005712.1_g000023 Rmu_sc0006198.1_g000019 Rmu_sc0006373.1_g000005 Rmu_sc0006514.1_g000028 Rmu_sc0006514.1_g000031 Rmu_sc0007367.1_g000010 Rmu_sc0011475.1_g000002 Rmu_sc0025304.1_g000001 Rmu_ssc0000161.1_g000030 Rmu_ssc0000161.1_g000032 Rmu_ssc0000387.1_g000018
rosa_roxburghii Rroxscaffold_1G00031090 Rroxscaffold_1G00032770 Rroxscaffold_1G00068950 Rroxscaffold_1G00069000 Rroxscaffold_1G00069010 Rroxscaffold_2G00129060 Rroxscaffold_2G00129100 Rroxscaffold_4G00309310 Rroxscaffold_4G00309320 Rroxscaffold_5G00350620 Rroxscaffold_5G00350630 Rroxscaffold_7G00162650 Rroxscaffold_7G00162660 Rroxscaffold_7G00162710
rosa_rugosa Rorug02G0564700 Rorug02G0564700 Rorug03G0343100 Rorug04G0189700 Rorug05G0102800 Rorug05G0102900 Rorug05G0103000 Rorug05G0106500 Rorug05G0106600 Rorug05G0106700 Rorug05G0252800 Rorug07G0182100 Rorug07G0283500 Rorug07G0283600
rosa_samantha Rh1AG004000 Rh1AG004100 Rh1AG004200 Rh1AG004400 Rh1AG004500 Rh1AG004600 Rh1AG004800 Rh1AG004900 Rh1AG005300 Rh1AG007000 Rh1AG115000 Rh1CG049400 Rh1CG055400 Rh1CG111000 Rh1DG053600 Rh1DG053700 Rh1DG059300 Rh1DG119700 Rh1DG177100 Rh1DG177200 Rh2AG353800 Rh2AG354000 Rh2AG354100 Rh2AG354300 Rh2AG354400 Rh2AG354500 Rh2AG354600 Rh2AG354700 Rh2AG642300 Rh2AG642400 Rh2AG642500 Rh2BG336500 Rh2BG336600 Rh2BG336700 Rh2BG336800 Rh2BG336900 Rh2CG299900 Rh2CG300000 Rh2CG300100 Rh2DG337000 Rh2DG337100 Rh3AG246600 Rh3BG121900 Rh3BG122300 Rh3BG122600 Rh3BG122700 Rh3DG304800 Rh3DG304900 Rh4AG148800 Rh4AG249000 Rh4AG249100 Rh4AG249200 Rh4BG182700 Rh4BG182800 Rh4BG182900 Rh4BG254400 Rh4BG254500 Rh4BG254600 Rh4CG155500 Rh4CG155700 Rh4DG057900 Rh4DG058000 Rh4DG058100 Rh4DG058200 Rh4DG129100 Rh5AG364500 Rh5AG364600 Rh5AG364800 Rh5AG365300 Rh5CG363700 Rh5CG497600 Rh5DG239500 Rh5DG239600 Rh6AG173500 Rh6AG175400 Rh6BG075900 Rh6BG076300 Rh6BG076400 Rh6BG076500 Rh6BG076600 Rh6CG151000 Rh6CG151200 Rh6CG151300 Rh6CG151400 Rh6CG205200 Rh6CG205300 Rh6CG419700 Rh6CG419900 Rh6CG420100 Rh6DG498700 Rh6DG498800 Rh7AG329000 Rh7AG329100 Rh7AG329300 Rh7AG329400 Rh7AG353000 Rh7AG353100 Rh7AG353300 Rh7AG353400 Rh7AG353500 Rh7CG346400 Rh7CG346500 Rh7CG346700 Rh7CG370800 Rh7CG370900 Rh7CG371000 Rh7CG371100 Rh7DG325000 Rh7DG325100 Rh7DG325200 Rh7DG325300 Rh7DG353100 Rh7DG353200 Rh7DG353300 Rh7DG363500 Rh7DG364000
rosa_wichuraiana Rw0G002290 Rw0G012780 Rw1G000260 Rw1G000270 Rw1G010400 Rw1G010410 Rw1G010420 Rw1G010430 Rw1G010440 Rw2G003210 Rw2G003220 Rw4G010970 Rw5G048520 Rw6G013320 Rw6G013470 Rw6G014940 Rw6G016570 Rw6G016590 Rw6G016600 Rw6G016610 Rw6G016620 Rw6G035450 Rw7G027760 Rw7G030460

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1407
Acc36I ACCTGC 1 cut(s) 340
Acc65I GGTACC 2 cut(s) 281, 940
AccB1I GGYRCC 2 cut(s) 281, 940
AccII CGCG 5 cut(s) 368, 644, 727, 882, 1235
AciI CCGC 7 cut(s) 24, 186, 214, 368, 429, 882, 1235
AclWI GGATC 3 cut(s) 65, 921, 1403
AcsI RAATTY 2 cut(s) 332, 686
AcuI CTGAAG 1 cut(s) 705
AcyI GRCGYC 1 cut(s) 1404
AfaI GTAC 5 cut(s) 283, 476, 942, 1244, 1422
AflII CTTAAG 1 cut(s) 88
AflIII ACRYGT 1 cut(s) 1338
AgsI TTSAA 5 cut(s) 102, 691, 790, 922, 1303
AhdI GACNNNNNGTC 1 cut(s) 1129
AjnI CCWGG 8 cut(s) 73, 376, 671, 847, 972, 992, 1071, 1387
AloI GAACNNNNNNTCC 2 cut(s) 1325, 1357
AluBI AGCT 3 cut(s) 133, 604, 1216
AluI AGCT 3 cut(s) 133, 604, 1216
Alw21I GWGCWC 4 cut(s) 13, 992, 1067, 1104
Alw26I GTCTC 3 cut(s) 89, 710, 1430
Alw44I GTGCAC 2 cut(s) 1063, 1100
AlwI GGATC 3 cut(s) 65, 921, 1403
AoxI GGCC 5 cut(s) 241, 441, 467, 845, 1078
ApaLI GTGCAC 2 cut(s) 1063, 1100
ApeKI GCWGC 5 cut(s) 19, 50, 311, 346, 604
ApoI RAATTY 2 cut(s) 332, 686
Asp718I GGTACC 2 cut(s) 281, 940
AspLEI GCGC 3 cut(s) 646, 727, 882
AspS9I GGNCC 6 cut(s) 77, 441, 467, 845, 884, 1079
AsuC2I CCSGG 2 cut(s) 945, 1322
AsuHPI GGTGA 7 cut(s) 176, 503, 661, 886, 967, 1027, 1409
AvaII GGWCC 2 cut(s) 77, 884
BaeGI GKGCMC 4 cut(s) 321, 1067, 1104, 1388
BanI GGYRCC 2 cut(s) 281, 940
BarI GAAGNNNNNNTAC 6 cut(s) 690, 722, 1269, 1301, 1413, 1445
BbsI GAAGAC 2 cut(s) 217, 1040
Bbv12I GWGCWC 4 cut(s) 13, 992, 1067, 1104
BbvI GCAGC 5 cut(s) 31, 37, 298, 358, 591
BccI CCATC 5 cut(s) 35, 59, 62, 200, 1090
BceAI ACGGC 1 cut(s) 1161
BciT130I CCWGG 8 cut(s) 75, 378, 673, 849, 974, 994, 1073, 1389
BciVI GTATCC 1 cut(s) 1278
BcnI CCSGG 2 cut(s) 945, 1322
BcoDI GTCTC 3 cut(s) 89, 710, 1430
BfaI CTAG 3 cut(s) 138, 459, 579
BfmI CTRYAG 3 cut(s) 679, 748, 807
BfrI CTTAAG 1 cut(s) 88
BfuAI ACCTGC 1 cut(s) 340
BfuI GTATCC 1 cut(s) 1278
BisI GCNGC 5 cut(s) 20, 51, 312, 347, 605
BlsI GCNGC 5 cut(s) 21, 52, 313, 348, 606
Bme18I GGWCC 2 cut(s) 77, 884
BmeRI GACNNNNNGTC 1 cut(s) 1129
BmgT120I GGNCC 6 cut(s) 77, 441, 467, 845, 884, 1079
BmiI GGNNCC 4 cut(s) 283, 442, 622, 942
BmrI ACTGGG 1 cut(s) 1043
BmsI GCATC 4 cut(s) 372, 550, 867, 978
BmuI ACTGGG 1 cut(s) 1043
BpiI GAAGAC 2 cut(s) 217, 1040
BplI GAGNNNNNCTC 2 cut(s) 534, 566
BpmI CTGGAG 1 cut(s) 1454
BpuEI CTTGAG 1 cut(s) 266
BpuMI CCSGG 2 cut(s) 945, 1322
BsaBI GATNNNNATC 1 cut(s) 69
BsaHI GRCGYC 1 cut(s) 1404
BsaJI CCNNGG 6 cut(s) 32, 377, 672, 993, 1071, 1387
BsaXI ACNNNNNCTCC 2 cut(s) 939, 969
Bse118I RCCGGY 1 cut(s) 443
Bse1I ACTGG 3 cut(s) 930, 942, 1038
Bse8I GATNNNNATC 1 cut(s) 69
BseBI CCWGG 8 cut(s) 75, 378, 673, 849, 974, 994, 1073, 1389
BseDI CCNNGG 6 cut(s) 32, 377, 672, 993, 1071, 1387
BseGI GGATG 5 cut(s) 27, 387, 740, 860, 969
BseJI GATNNNNATC 1 cut(s) 69
BseNI ACTGG 3 cut(s) 930, 942, 1038
BseRI GAGGAG 2 cut(s) 494, 748
BseSI GKGCMC 4 cut(s) 321, 1067, 1104, 1388
BseXI GCAGC 5 cut(s) 31, 37, 298, 358, 591
BseYI CCCAGC 1 cut(s) 1216
BsgI GTGCAG 2 cut(s) 1224, 1277
Bsh1236I CGCG 5 cut(s) 368, 644, 727, 882, 1235
BshFI GGCC 5 cut(s) 243, 443, 469, 847, 1080
BshNI GGYRCC 2 cut(s) 281, 940
BsiHKAI GWGCWC 4 cut(s) 13, 992, 1067, 1104
BsiSI CCGG 3 cut(s) 444, 945, 1321
BslFI GGGAC 1 cut(s) 988
BsmAI GTCTC 3 cut(s) 89, 710, 1430
BsmBI CGTCTC 1 cut(s) 1430
BsmFI GGGAC 1 cut(s) 988
BsnI GGCC 5 cut(s) 243, 443, 469, 847, 1080
Bsp1286I GDGCHC 6 cut(s) 13, 321, 992, 1067, 1104, 1388
Bsp143I GATC 3 cut(s) 70, 926, 1408
BspACI CCGC 7 cut(s) 24, 186, 214, 368, 429, 882, 1235
BspANI GGCC 5 cut(s) 243, 443, 469, 847, 1080
BspFNI CGCG 5 cut(s) 368, 644, 727, 882, 1235
BspHI TCATGA 1 cut(s) 1314
BspLI GGNNCC 4 cut(s) 283, 442, 622, 942
BspMI ACCTGC 1 cut(s) 340
BspPI GGATC 3 cut(s) 65, 921, 1403
BspQI GCTCTTC 1 cut(s) 366
BspT107I GGYRCC 2 cut(s) 281, 940
BspTI CTTAAG 1 cut(s) 88
BsrFI RCCGGY 1 cut(s) 443
BsrI ACTGG 3 cut(s) 930, 942, 1038
BssAI RCCGGY 1 cut(s) 443
BssECI CCNNGG 6 cut(s) 32, 377, 672, 993, 1071, 1387
BssMI GATC 3 cut(s) 70, 926, 1408
BssNI GRCGYC 1 cut(s) 1404
BssT1I CCWWGG 1 cut(s) 32
Bst2UI CCWGG 8 cut(s) 75, 378, 673, 849, 974, 994, 1073, 1389
Bst4CI ACNGT 7 cut(s) 81, 683, 749, 874, 1129, 1142, 1247
Bst6I CTCTTC 3 cut(s) 366, 896, 917
BstACI GRCGYC 1 cut(s) 1404
BstAFI CTTAAG 1 cut(s) 88
BstC8I GCNNGC 3 cut(s) 24, 1041, 1365
BstEII GGTNACC 1 cut(s) 955
BstF5I GGATG 5 cut(s) 27, 387, 740, 860, 969
BstFNI CGCG 5 cut(s) 368, 644, 727, 882, 1235
BstHHI GCGC 3 cut(s) 646, 727, 882
BstKTI GATC 3 cut(s) 73, 929, 1411
BstMAI GTCTC 3 cut(s) 89, 710, 1430
BstMBI GATC 3 cut(s) 70, 926, 1408
BstMWI GCNNNNNNNGC 4 cut(s) 66, 130, 150, 382
BstNI CCWGG 8 cut(s) 75, 378, 673, 849, 974, 994, 1073, 1389
BstNSI RCATGY 3 cut(s) 128, 597, 1342
BstPI GGTNACC 1 cut(s) 955
BstSFI CTRYAG 3 cut(s) 679, 748, 807
BstSLI GKGCMC 4 cut(s) 321, 1067, 1104, 1388
BstUI CGCG 5 cut(s) 368, 644, 727, 882, 1235
BstV1I GCAGC 5 cut(s) 31, 37, 298, 358, 591
BstV2I GAAGAC 2 cut(s) 217, 1040
BstX2I RGATCY 1 cut(s) 926
BstXI CCANNNNNNTGG 1 cut(s) 937
BstYI RGATCY 1 cut(s) 926
BsuI GTATCC 1 cut(s) 1278
BsuRI GGCC 5 cut(s) 243, 443, 469, 847, 1080
BtsCI GGATG 5 cut(s) 27, 387, 740, 860, 969
BtsIMutI CAGTG 1 cut(s) 1138
BveI ACCTGC 1 cut(s) 340
Cac8I GCNNGC 3 cut(s) 24, 1041, 1365
CciI TCATGA 1 cut(s) 1314
CfoI GCGC 3 cut(s) 646, 727, 882
Cfr10I RCCGGY 1 cut(s) 443
Cfr13I GGNCC 6 cut(s) 77, 441, 467, 845, 884, 1079
CseI GACGC 1 cut(s) 1241
Csp6I GTAC 5 cut(s) 282, 475, 941, 1243, 1421
CviAII CATG 8 cut(s) 125, 154, 539, 557, 594, 625, 1315, 1339
CviQI GTAC 5 cut(s) 282, 475, 941, 1243, 1421
DpnI GATC 3 cut(s) 72, 928, 1410
DpnII GATC 3 cut(s) 70, 926, 1408
DriI GACNNNNNGTC 1 cut(s) 1129
Eam1104I CTCTTC 3 cut(s) 366, 896, 917
Eam1105I GACNNNNNGTC 1 cut(s) 1129
EarI CTCTTC 3 cut(s) 366, 896, 917
Eco130I CCWWGG 1 cut(s) 32
Eco32I GATATC 2 cut(s) 634, 822
Eco47I GGWCC 2 cut(s) 77, 884
Eco57I CTGAAG 1 cut(s) 705
Eco91I GGTNACC 1 cut(s) 955
EcoO65I GGTNACC 1 cut(s) 955
EcoRII CCWGG 8 cut(s) 73, 376, 671, 847, 972, 992, 1071, 1387
EcoRV GATATC 2 cut(s) 634, 822
EcoT14I CCWWGG 1 cut(s) 32
EcoT22I ATGCAT 1 cut(s) 1165
ErhI CCWWGG 1 cut(s) 32
Esp3I CGTCTC 1 cut(s) 1430
FaeI CATG 8 cut(s) 128, 157, 542, 560, 597, 628, 1318, 1342
FaqI GGGAC 1 cut(s) 988
FatI CATG 8 cut(s) 124, 153, 538, 556, 593, 624, 1314, 1338
FauI CCCGC 1 cut(s) 31
Fnu4HI GCNGC 5 cut(s) 20, 51, 312, 347, 605
FokI GGATG 5 cut(s) 14, 394, 727, 847, 956
Fsp4HI GCNGC 5 cut(s) 20, 51, 312, 347, 605
FspBI CTAG 3 cut(s) 138, 459, 579
GlaI GCGC 3 cut(s) 645, 726, 881
GluI GCNGC 5 cut(s) 20, 51, 312, 347, 605
GsaI CCCAGC 1 cut(s) 1220
GsuI CTGGAG 1 cut(s) 1454
HaeIII GGCC 5 cut(s) 243, 443, 469, 847, 1080
HapII CCGG 3 cut(s) 444, 945, 1321
HgaI GACGC 1 cut(s) 1241
HhaI GCGC 3 cut(s) 646, 727, 882
Hin1I GRCGYC 1 cut(s) 1404
Hin1II CATG 8 cut(s) 128, 157, 542, 560, 597, 628, 1318, 1342
Hin6I GCGC 3 cut(s) 644, 725, 880
HinP1I GCGC 3 cut(s) 644, 725, 880
HincII GTYRAC 1 cut(s) 935
HindII GTYRAC 1 cut(s) 935
HinfI GANTC 4 cut(s) 98, 526, 786, 1045
HpaII CCGG 3 cut(s) 444, 945, 1321
HphI GGTGA 7 cut(s) 176, 503, 661, 886, 967, 1027, 1409
Hpy166II GTNNAC 6 cut(s) 475, 887, 935, 1065, 1102, 1333
Hpy188I TCNGA 4 cut(s) 616, 833, 1030, 1284
Hpy188III TCNNGA 5 cut(s) 338, 523, 1052, 1315, 1433
Hpy8I GTNNAC 6 cut(s) 475, 887, 935, 1065, 1102, 1333
Hpy99I CGWCG 2 cut(s) 1406, 1409
HpyAV CCTTC 6 cut(s) 161, 289, 576, 828, 1271, 1297
HpyCH4III ACNGT 7 cut(s) 81, 683, 749, 874, 1129, 1142, 1247
HpyCH4IV ACGT 1 cut(s) 1404
HpyF10VI GCNNNNNNNGC 4 cut(s) 66, 130, 150, 382
HpySE526I ACGT 1 cut(s) 1404
Hsp92I GRCGYC 1 cut(s) 1404
Hsp92II CATG 8 cut(s) 128, 157, 542, 560, 597, 628, 1318, 1342
HspAI GCGC 3 cut(s) 644, 725, 880
KpnI GGTACC 2 cut(s) 285, 944
Kzo9I GATC 3 cut(s) 70, 926, 1408
LguI GCTCTTC 1 cut(s) 366
LmnI GCTCC 2 cut(s) 542, 620
Lsp1109I GCAGC 5 cut(s) 31, 37, 298, 358, 591
LweI GCATC 4 cut(s) 372, 550, 867, 978
MaeI CTAG 3 cut(s) 138, 459, 579
MaeII ACGT 1 cut(s) 1404
MaeIII GTNAC 6 cut(s) 491, 587, 955, 1015, 1142, 1397
MalI GATC 3 cut(s) 72, 928, 1410
MboI GATC 3 cut(s) 70, 926, 1408
MboII GAAGA 8 cut(s) 217, 383, 765, 849, 883, 934, 1040, 1465
MflI RGATCY 1 cut(s) 926
MhlI GDGCHC 6 cut(s) 13, 321, 992, 1067, 1104, 1388
MluCI AATT 5 cut(s) 305, 332, 686, 1308, 1459
MlyI GAGTC 1 cut(s) 1054
MmeI TCCRAC 2 cut(s) 768, 1262
Mph1103I ATGCAT 1 cut(s) 1165
MseI TTAA 2 cut(s) 89, 600
MslI CAYNNNNRTG 1 cut(s) 516
MspCI CTTAAG 1 cut(s) 88
MspI CCGG 3 cut(s) 444, 945, 1321
MvaI CCWGG 8 cut(s) 75, 378, 673, 849, 974, 994, 1073, 1389
MvnI CGCG 5 cut(s) 368, 644, 727, 882, 1235
MwoI GCNNNNNNNGC 4 cut(s) 66, 130, 150, 382
NciI CCSGG 2 cut(s) 945, 1322
NdeII GATC 3 cut(s) 70, 926, 1408
NlaIII CATG 8 cut(s) 128, 157, 542, 560, 597, 628, 1318, 1342
NlaIV GGNNCC 4 cut(s) 283, 442, 622, 942
NmuCI GTSAC 5 cut(s) 491, 955, 1015, 1142, 1397
NsiI ATGCAT 1 cut(s) 1165
NspI RCATGY 3 cut(s) 128, 597, 1342
PagI TCATGA 1 cut(s) 1314
PciI ACATGT 1 cut(s) 1338
PciSI GCTCTTC 1 cut(s) 366
PfeI GAWTC 3 cut(s) 98, 526, 786
PflFI GACNNNGTC 3 cut(s) 81, 961, 1403
PfoI TCCNGGA 2 cut(s) 73, 972
PkrI GCNGC 5 cut(s) 21, 52, 313, 348, 606
PleI GAGTC 1 cut(s) 1053
PpsI GAGTC 1 cut(s) 1053
PscI ACATGT 1 cut(s) 1338
Psp6I CCWGG 8 cut(s) 73, 376, 671, 847, 972, 992, 1071, 1387
PspEI GGTNACC 1 cut(s) 955
PspFI CCCAGC 1 cut(s) 1216
PspGI CCWGG 8 cut(s) 73, 376, 671, 847, 972, 992, 1071, 1387
PspN4I GGNNCC 4 cut(s) 283, 442, 622, 942
PspPI GGNCC 6 cut(s) 77, 441, 467, 845, 884, 1079
PsuI RGATCY 1 cut(s) 926
PsyI GACNNNGTC 3 cut(s) 81, 961, 1403
RsaI GTAC 5 cut(s) 283, 476, 942, 1244, 1422
RsaNI GTAC 5 cut(s) 282, 475, 941, 1243, 1421
RseI CAYNNNNRTG 1 cut(s) 516
SapI GCTCTTC 1 cut(s) 366
SaqAI TTAA 2 cut(s) 89, 600
SatI GCNGC 5 cut(s) 20, 51, 312, 347, 605
Sau3AI GATC 3 cut(s) 70, 926, 1408
Sau96I GGNCC 6 cut(s) 77, 441, 467, 845, 884, 1079
SchI GAGTC 1 cut(s) 1054
SduI GDGCHC 6 cut(s) 13, 321, 992, 1067, 1104, 1388
SfaNI GCATC 4 cut(s) 372, 550, 867, 978
SfcI CTRYAG 3 cut(s) 679, 748, 807
SinI GGWCC 2 cut(s) 77, 884
SmiMI CAYNNNNRTG 1 cut(s) 516
SmlI CTYRAG 2 cut(s) 88, 245
SmoI CTYRAG 2 cut(s) 88, 245
Sse9I AATT 5 cut(s) 305, 332, 686, 1308, 1459
SsiI CCGC 7 cut(s) 24, 186, 214, 368, 429, 882, 1235
SspMI CTAG 3 cut(s) 138, 459, 579
StyI CCWWGG 1 cut(s) 32
TaaI ACNGT 7 cut(s) 81, 683, 749, 874, 1129, 1142, 1247
TaiI ACGT 1 cut(s) 1407
TaqI TCGA 2 cut(s) 354, 1407
TasI AATT 5 cut(s) 305, 332, 686, 1308, 1459
TfiI GAWTC 3 cut(s) 98, 526, 786
Tru1I TTAA 2 cut(s) 89, 600
Tru9I TTAA 2 cut(s) 89, 600
TscAI CASTG 1 cut(s) 1145
TseFI GTSAC 5 cut(s) 491, 955, 1015, 1142, 1397
TseI GCWGC 5 cut(s) 19, 50, 311, 346, 604
Tsp45I GTSAC 5 cut(s) 491, 955, 1015, 1142, 1397
TspDTI ATGAA 5 cut(s) 308, 372, 849, 1331, 1458
TspGWI ACGGA 7 cut(s) 244, 289, 497, 633, 1287, 1334, 1401
TspRI CASTG 1 cut(s) 1145
Tth111I GACNNNGTC 3 cut(s) 81, 961, 1403
Vha464I CTTAAG 1 cut(s) 88
VneI GTGCAC 2 cut(s) 1063, 1100
VpaK11BI GGWCC 2 cut(s) 77, 884
XapI RAATTY 2 cut(s) 332, 686
XceI RCATGY 3 cut(s) 128, 597, 1342
XcmI CCANNNNNNNNNTGG 1 cut(s) 1030
XspI CTAG 3 cut(s) 138, 459, 579
ZraI GACGTC 1 cut(s) 1405
Zsp2I ATGCAT 1 cut(s) 1165
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.