Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3D

Orthogroup ID

OG0000124

Physical Location & Seq

Genomic Coordinates Forward (+)

32351990 .. 32356212

Gene Structure 4223 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3DG304900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1107 bp

ATGGCCGATTTCAGCACAATGTTTCACCGAAGCTTCATCGTCGTTGTGCGGTACCCGGGACAGAACGTCGAAGATGCGAAAATTCCACCGCGCTTTAGTAAGGAGCACTTGAGGGACGATGAGGATGGGGTCGCTCGACTGGTCTTGGATGGATGCAGGGAGTGTTCATATTATGTGAAGGTTACCCCACAAGGGCAGGACCATTGGCTGGGTTCTGGTTGGGGGAGCTTTCTCGACAATGTACGACACGGTCAGGGTCGAATGGTGCTGCTACTCCAGTACAAAGGCGGAATGAAGTTCGTCGTGCGCCGGTATGATGTGAACGGGGCGTTGATGCTGATTGCGGACGGAGCCCCTGCTGTTTGTGACTTCCGATGGGAGACGGATCCTCCAGTATTCCAGCAGGTGGAGATCACGGGAGGACGTAGGAAGCTAAGATTCGTACATGAATGGGAACGCTTTCACTTGGAGAATCGCTTGGGAAAACGTCGGTGTTGTGTGTTCACCTACCTGGGAAATCTGCGGTTCTCGGTTCTTGTGTTCGACACTGTTCGAGGAACCCTTTGCACGACGCCTCTGCAATTCACCCGTGCTCCAGACGCGGCTCCACATACCAATGGTATTGGCCAAGAAGAGGGGAATCTGGACCCTGAGGAGGACCATAGGGATGAGGATGGGGCACAGGTGGAAGATATGGAGGAAGATATGGAGCAAGGAATCAATGAAGATGCAGTTGAAGAAGGATATCGCGTCCCTCCGGAGGAAAGGGTGCTAGTTTCATGGCGTAGAGGGAGATCCTGCCAATGCACAATCCAGAGATGTCACGGTGTGGTATGTTGGACCACCTTTCAGTGGGCTGGACACCGTAATAAACCCTATTCCAACTGCGGCCCAGACACCGGAACAAACCCTAGTATAAATGTCTCCCGTTCCCGGAACTCTTCTCTTTTCAGCCACCGAAAACAAGCAAACAGACGTCTGAGCGAGTCGCCGACCACAGGGTTCGAATTGCAAATCCAACCACCAGGAGGGGAGATGGACTCAGCTGGGAACATCAGAACTAGCGGGTATGTAAACATGTTTGAATGTCAGTTCGTCGATAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016553 GO:0016554 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR

Protein Analysis

368

Amino Acids

41.95

Weight (kDa)

5.92

Isoelectric Point (pI)

49.69

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000124)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g10992 FvH4_2g25150 FvH4_2g27910 FvH4_2g27931 FvH4_4g09443 FvH4_4g09490 FvH4_4g15990 FvH4_4g15991 FvH4_6g07180 FvH4_6g40320 FvH4_7g10222 FvH4_7g10251
rosa_chinensis	RchiOBHm_Chr2g0155611
rosa_laevigata	RLG00000009253 RLG00000009254 RLG00000011848 RLG00000017301 RLG00000017302 RLG00000034909
rosa_multiflora	Rmu_co8063658.1_g000001 Rmu_co8240443.1_g000001 Rmu_co8264451.1_g000001 Rmu_co8381937.1_g000001 Rmu_co8419903.1_g000001 Rmu_co8513405.1_g000002 Rmu_co8522915.1_g000001 Rmu_co8522915.1_g000004 Rmu_sc0000279.1_g000024 Rmu_sc0000279.1_g000048 Rmu_sc0000642.1_g000017 Rmu_sc0002045.1_g000015 Rmu_sc0002045.1_g000018 Rmu_sc0002045.1_g000023 Rmu_sc0002045.1_g000028 Rmu_sc0003047.1_g000008 Rmu_sc0003179.1_g000019 Rmu_sc0003179.1_g000020 Rmu_sc0003179.1_g000022 Rmu_sc0003179.1_g000023 Rmu_sc0003422.1_g000011 Rmu_sc0004999.1_g000014 Rmu_sc0005712.1_g000018 Rmu_sc0005712.1_g000023 Rmu_sc0006198.1_g000019 Rmu_sc0006373.1_g000005 Rmu_sc0006514.1_g000028 Rmu_sc0006514.1_g000031 Rmu_sc0007367.1_g000010 Rmu_sc0011475.1_g000002 Rmu_sc0025304.1_g000001 Rmu_ssc0000161.1_g000030 Rmu_ssc0000161.1_g000032 Rmu_ssc0000387.1_g000018
rosa_roxburghii	Rroxscaffold_1G00031090 Rroxscaffold_1G00032770 Rroxscaffold_1G00068950 Rroxscaffold_1G00069000 Rroxscaffold_1G00069010 Rroxscaffold_2G00129060 Rroxscaffold_2G00129100 Rroxscaffold_4G00309310 Rroxscaffold_4G00309320 Rroxscaffold_5G00350620 Rroxscaffold_5G00350630 Rroxscaffold_7G00162650 Rroxscaffold_7G00162660 Rroxscaffold_7G00162710
rosa_rugosa	Rorug02G0564700 Rorug02G0564700 Rorug03G0343100 Rorug04G0189700 Rorug05G0102800 Rorug05G0102900 Rorug05G0103000 Rorug05G0106500 Rorug05G0106600 Rorug05G0106700 Rorug05G0252800 Rorug07G0182100 Rorug07G0283500 Rorug07G0283600
rosa_samantha	Rh1AG004000 Rh1AG004100 Rh1AG004200 Rh1AG004400 Rh1AG004500 Rh1AG004600 Rh1AG004800 Rh1AG004900 Rh1AG005300 Rh1AG007000 Rh1AG115000 Rh1CG049400 Rh1CG055400 Rh1CG111000 Rh1DG053600 Rh1DG053700 Rh1DG059300 Rh1DG119700 Rh1DG177100 Rh1DG177200 Rh2AG353800 Rh2AG354000 Rh2AG354100 Rh2AG354300 Rh2AG354400 Rh2AG354500 Rh2AG354600 Rh2AG354700 Rh2AG642300 Rh2AG642400 Rh2AG642500 Rh2BG336500 Rh2BG336600 Rh2BG336700 Rh2BG336800 Rh2BG336900 Rh2CG299900 Rh2CG300000 Rh2CG300100 Rh2DG337000 Rh2DG337100 Rh3AG246600 Rh3BG121900 Rh3BG122300 Rh3BG122600 Rh3BG122700 Rh3DG304800 Rh3DG304900 Rh4AG148800 Rh4AG249000 Rh4AG249100 Rh4AG249200 Rh4BG182700 Rh4BG182800 Rh4BG182900 Rh4BG254400 Rh4BG254500 Rh4BG254600 Rh4CG155500 Rh4CG155700 Rh4DG057900 Rh4DG058000 Rh4DG058100 Rh4DG058200 Rh4DG129100 Rh5AG364500 Rh5AG364600 Rh5AG364800 Rh5AG365300 Rh5CG363700 Rh5CG497600 Rh5DG239500 Rh5DG239600 Rh6AG173500 Rh6AG175400 Rh6BG075900 Rh6BG076300 Rh6BG076400 Rh6BG076500 Rh6BG076600 Rh6CG151000 Rh6CG151200 Rh6CG151300 Rh6CG151400 Rh6CG205200 Rh6CG205300 Rh6CG419700 Rh6CG419900 Rh6CG420100 Rh6DG498700 Rh6DG498800 Rh7AG329000 Rh7AG329100 Rh7AG329300 Rh7AG329400 Rh7AG353000 Rh7AG353100 Rh7AG353300 Rh7AG353400 Rh7AG353500 Rh7CG346400 Rh7CG346500 Rh7CG346700 Rh7CG370800 Rh7CG370900 Rh7CG371000 Rh7CG371100 Rh7DG325000 Rh7DG325100 Rh7DG325200 Rh7DG325300 Rh7DG353100 Rh7DG353200 Rh7DG353300 Rh7DG363500 Rh7DG364000
rosa_wichuraiana	Rw0G002290 Rw0G012780 Rw1G000260 Rw1G000270 Rw1G010400 Rw1G010410 Rw1G010420 Rw1G010430 Rw1G010440 Rw2G003210 Rw2G003220 Rw4G010970 Rw5G048520 Rw6G013320 Rw6G013470 Rw6G014940 Rw6G016570 Rw6G016590 Rw6G016600 Rw6G016610 Rw6G016620 Rw6G035450 Rw7G027760 Rw7G030460

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	394
AatII	GACGTC	1 cut(s)	979
Acc36I	ACCTGC	1 cut(s)	394
Acc65I	GGTACC	1 cut(s)	51
AccB1I	GGYRCC	1 cut(s)	51
AccB7I	CCANNNNNTGG	2 cut(s)	208, 406
AccII	CGCG	3 cut(s)	91, 602, 750
AccIII	TCCGGA	1 cut(s)	757
AciI	CCGC	8 cut(s)	49, 89, 288, 344, 523, 602, 888, 1065
AclWI	GGATC	3 cut(s)	380, 393, 789
AcoI	YGGCCR	2 cut(s)	3, 625
AcsI	RAATTY	1 cut(s)	81
AcyI	GRCGYC	2 cut(s)	572, 976
AdeI	CACNNNGTG	1 cut(s)	829
AfaI	GTAC	4 cut(s)	53, 243, 281, 444
AflIII	ACRYGT	1 cut(s)	1077
AgsI	TTSAA	2 cut(s)	737, 1085
AhdI	GACNNNNNGTC	1 cut(s)	65
AjnI	CCWGG	2 cut(s)	510, 1024
AluBI	AGCT	4 cut(s)	33, 228, 433, 1046
AluI	AGCT	4 cut(s)	33, 228, 433, 1046
Alw21I	GWGCWC	2 cut(s)	108, 595
Alw26I	GTCTC	2 cut(s)	374, 928
AlwI	GGATC	3 cut(s)	380, 393, 789
Ama87I	CYCGRG	1 cut(s)	55
Aor13HI	TCCGGA	1 cut(s)	757
AoxI	GGCC	3 cut(s)	3, 625, 889
ApeKI	GCWGC	1 cut(s)	268
ApoI	RAATTY	1 cut(s)	81
Asp700I	GAANNNNTTC	1 cut(s)	459
Asp718I	GGTACC	1 cut(s)	51
AspLEI	GCGC	2 cut(s)	93, 309
AspS9I	GGNCC	5 cut(s)	199, 646, 658, 840, 890
AsuC2I	CCSGG	3 cut(s)	56, 57, 934
AsuHPI	GGTGA	3 cut(s)	17, 496, 577
AsuII	TTCGAA	1 cut(s)	1005
AvaI	CYCGRG	1 cut(s)	55
AvaII	GGWCC	4 cut(s)	199, 646, 658, 840
AxyI	CCTNAGG	1 cut(s)	651
BaeGI	GKGCMC	1 cut(s)	682
BalI	TGGCCA	1 cut(s)	627
BamHI	GGATCC	1 cut(s)	385
BanI	GGYRCC	1 cut(s)	51
BanII	GRGCYC	1 cut(s)	355
Bbv12I	GWGCWC	2 cut(s)	108, 595
BbvI	GCAGC	1 cut(s)	255
BccI	CCATC	5 cut(s)	119, 143, 369, 668, 1030
BcgI	CGANNNNNNTGC	2 cut(s)	559, 593
BciT130I	CCWGG	2 cut(s)	512, 1026
BcnI	CCSGG	3 cut(s)	56, 57, 934
BcoDI	GTCTC	2 cut(s)	374, 928
BfaI	CTAG	3 cut(s)	773, 912, 1062
BfuAI	ACCTGC	1 cut(s)	394
BisI	GCNGC	3 cut(s)	269, 603, 889
BlsI	GCNGC	3 cut(s)	270, 604, 890
Bme1390I	CCNGG	5 cut(s)	56, 57, 512, 934, 1026
Bme18I	GGWCC	4 cut(s)	199, 646, 658, 840
BmeRI	GACNNNNNGTC	1 cut(s)	65
BmeT110I	CYCGRG	1 cut(s)	55
BmgT120I	GGNCC	5 cut(s)	199, 646, 658, 840, 890
BmiI	GGNNCC	6 cut(s)	53, 352, 387, 559, 606, 648
BmrFI	CCNGG	5 cut(s)	56, 57, 512, 934, 1026
BmsI	GCATC	4 cut(s)	64, 143, 324, 718
BplI	GAGNNNNNCTC	2 cut(s)	1025, 1057
BpmI	CTGGAG	3 cut(s)	260, 375, 579
Bpu14I	TTCGAA	1 cut(s)	1005
BpuEI	CTTGAG	1 cut(s)	130
BpuMI	CCSGG	3 cut(s)	56, 57, 934
BsaHI	GRCGYC	2 cut(s)	572, 976
BsaJI	CCNNGG	2 cut(s)	55, 511
BsaWI	WCCGGW	2 cut(s)	757, 899
BsaXI	ACNNNNNCTCC	4 cut(s)	373, 403, 577, 607
Bse118I	RCCGGY	1 cut(s)	309
Bse1I	ACTGG	3 cut(s)	144, 277, 392
Bse21I	CCTNAGG	1 cut(s)	651
BseAI	TCCGGA	1 cut(s)	757
BseBI	CCWGG	2 cut(s)	512, 1026
BseDI	CCNNGG	2 cut(s)	55, 511
BseGI	GGATG	5 cut(s)	130, 154, 158, 673, 679
BseMII	CTCAG	3 cut(s)	642, 971, 1056
BseNI	ACTGG	3 cut(s)	144, 277, 392
BseRI	GAGGAG	1 cut(s)	668
BseSI	GKGCMC	1 cut(s)	682
BseXI	GCAGC	1 cut(s)	255
BseYI	CCCAGC	2 cut(s)	208, 1046
Bsh1236I	CGCG	3 cut(s)	91, 602, 750
BshFI	GGCC	3 cut(s)	5, 627, 891
BshNI	GGYRCC	1 cut(s)	51
BsiHKAI	GWGCWC	2 cut(s)	108, 595
BsiHKCI	CYCGRG	1 cut(s)	55
BsiSI	CCGG	5 cut(s)	56, 310, 758, 900, 934
BslFI	GGGAC	3 cut(s)	72, 128, 737
BsmAI	GTCTC	2 cut(s)	374, 928
BsmBI	CGTCTC	1 cut(s)	374
BsmFI	GGGAC	3 cut(s)	72, 128, 737
BsnI	GGCC	3 cut(s)	5, 627, 891
BsoBI	CYCGRG	1 cut(s)	55
Bsp119I	TTCGAA	1 cut(s)	1005
Bsp1286I	GDGCHC	4 cut(s)	108, 355, 595, 682
Bsp13I	TCCGGA	1 cut(s)	757
Bsp143I	GATC	3 cut(s)	385, 411, 794
BspACI	CCGC	8 cut(s)	49, 89, 288, 344, 523, 602, 888, 1065
BspANI	GGCC	3 cut(s)	5, 627, 891
BspCNI	CTCAG	3 cut(s)	643, 972, 1055
BspEI	TCCGGA	1 cut(s)	757
BspFNI	CGCG	3 cut(s)	91, 602, 750
BspLI	GGNNCC	6 cut(s)	53, 352, 387, 559, 606, 648
BspMI	ACCTGC	1 cut(s)	394
BspPI	GGATC	3 cut(s)	380, 393, 789
BspT104I	TTCGAA	1 cut(s)	1005
BspT107I	GGYRCC	1 cut(s)	51
BsrFI	RCCGGY	1 cut(s)	309
BsrI	ACTGG	3 cut(s)	144, 277, 392
BssAI	RCCGGY	1 cut(s)	309
BssECI	CCNNGG	2 cut(s)	55, 511
BssMI	GATC	3 cut(s)	385, 411, 794
BssNI	GRCGYC	2 cut(s)	572, 976
Bst2UI	CCWGG	2 cut(s)	512, 1026
Bst4CI	ACNGT	4 cut(s)	251, 550, 827, 866
Bst6I	CTCTTC	2 cut(s)	627, 946
BstACI	GRCGYC	2 cut(s)	572, 976
BstBI	TTCGAA	1 cut(s)	1005
BstDEI	CTNAG	4 cut(s)	434, 651, 980, 1042
BstEII	GGTNACC	1 cut(s)	181
BstF5I	GGATG	5 cut(s)	130, 154, 158, 673, 679
BstFNI	CGCG	3 cut(s)	91, 602, 750
BstHHI	GCGC	2 cut(s)	93, 309
BstKTI	GATC	3 cut(s)	388, 414, 797
BstMAI	GTCTC	2 cut(s)	374, 928
BstMBI	GATC	3 cut(s)	385, 411, 794
BstMWI	GCNNNNNNNGC	2 cut(s)	350, 599
BstNI	CCWGG	2 cut(s)	512, 1026
BstNSI	RCATGY	1 cut(s)	1081
BstPI	GGTNACC	1 cut(s)	181
BstSCI	CCNGG	5 cut(s)	54, 55, 510, 932, 1024
BstSLI	GKGCMC	1 cut(s)	682
BstUI	CGCG	3 cut(s)	91, 602, 750
BstV1I	GCAGC	1 cut(s)	255
BstX2I	RGATCY	2 cut(s)	385, 794
BstYI	RGATCY	2 cut(s)	385, 794
Bsu36I	CCTNAGG	1 cut(s)	651
BsuRI	GGCC	3 cut(s)	5, 627, 891
BtsCI	GGATG	5 cut(s)	130, 154, 158, 673, 679
BtsIMutI	CAGTG	2 cut(s)	546, 857
BveI	ACCTGC	1 cut(s)	394
CfoI	GCGC	2 cut(s)	93, 309
Cfr10I	RCCGGY	1 cut(s)	309
Cfr13I	GGNCC	5 cut(s)	199, 646, 658, 840, 890
Cfr9I	CCCGGG	1 cut(s)	55
CseI	GACGC	3 cut(s)	580, 608, 739
Csp6I	GTAC	4 cut(s)	52, 242, 280, 443
CviAII	CATG	3 cut(s)	446, 780, 1078
CviQI	GTAC	4 cut(s)	52, 242, 280, 443
DdeI	CTNAG	4 cut(s)	434, 651, 980, 1042
DpnI	GATC	3 cut(s)	387, 413, 796
DpnII	GATC	3 cut(s)	385, 411, 794
DraIII	CACNNNGTG	1 cut(s)	829
DriI	GACNNNNNGTC	1 cut(s)	65
EaeI	YGGCCR	2 cut(s)	3, 625
Eam1104I	CTCTTC	2 cut(s)	627, 946
Eam1105I	GACNNNNNGTC	1 cut(s)	65
EarI	CTCTTC	2 cut(s)	627, 946
EciI	GGCGGA	1 cut(s)	303
Eco24I	GRGCYC	1 cut(s)	355
Eco32I	GATATC	1 cut(s)	746
Eco47I	GGWCC	4 cut(s)	199, 646, 658, 840
Eco81I	CCTNAGG	1 cut(s)	651
Eco88I	CYCGRG	1 cut(s)	55
Eco91I	GGTNACC	1 cut(s)	181
EcoO65I	GGTNACC	1 cut(s)	181
EcoRII	CCWGG	2 cut(s)	510, 1024
EcoRV	GATATC	1 cut(s)	746
EcoT38I	GRGCYC	1 cut(s)	355
Esp3I	CGTCTC	1 cut(s)	374
FaeI	CATG	3 cut(s)	449, 783, 1081
FalI	AAGNNNNNCTT	2 cut(s)	92, 124
FaqI	GGGAC	3 cut(s)	72, 128, 737
FatI	CATG	3 cut(s)	445, 779, 1077
FauI	CCCGC	1 cut(s)	1058
Fnu4HI	GCNGC	3 cut(s)	269, 603, 889
FokI	GGATG	5 cut(s)	137, 161, 165, 680, 686
FriOI	GRGCYC	1 cut(s)	355
Fsp4HI	GCNGC	3 cut(s)	269, 603, 889
FspBI	CTAG	3 cut(s)	773, 912, 1062
GlaI	GCGC	2 cut(s)	92, 308
GluI	GCNGC	3 cut(s)	269, 603, 889
GsaI	CCCAGC	2 cut(s)	212, 1050
GsuI	CTGGAG	3 cut(s)	260, 375, 579
HaeIII	GGCC	3 cut(s)	5, 627, 891
HapII	CCGG	5 cut(s)	56, 310, 758, 900, 934
HgaI	GACGC	3 cut(s)	580, 608, 739
HhaI	GCGC	2 cut(s)	93, 309
Hin1I	GRCGYC	2 cut(s)	572, 976
Hin1II	CATG	3 cut(s)	449, 783, 1081
Hin6I	GCGC	2 cut(s)	91, 307
HinP1I	GCGC	2 cut(s)	91, 307
HindIII	AAGCTT	1 cut(s)	31
HinfI	GANTC	6 cut(s)	438, 472, 640, 717, 986, 1040
HpaII	CCGG	5 cut(s)	56, 310, 758, 900, 934
HphI	GGTGA	3 cut(s)	17, 496, 577
Hpy166II	GTNNAC	3 cut(s)	322, 504, 1075
Hpy188I	TCNGA	3 cut(s)	374, 981, 1058
Hpy188III	TCNNGA	5 cut(s)	233, 596, 644, 758, 814
Hpy8I	GTNNAC	3 cut(s)	322, 504, 1075
Hpy99I	CGWCG	6 cut(s)	44, 71, 305, 492, 574, 1100
HpyAV	CCTTC	2 cut(s)	172, 734
HpyCH4III	ACNGT	4 cut(s)	251, 550, 827, 866
HpyCH4IV	ACGT	4 cut(s)	66, 424, 487, 976
HpyCH4V	TGCA	6 cut(s)	156, 567, 580, 731, 807, 1012
HpyF10VI	GCNNNNNNNGC	2 cut(s)	350, 599
HpyF3I	CTNAG	4 cut(s)	434, 651, 980, 1042
HpySE526I	ACGT	4 cut(s)	66, 424, 487, 976
Hsp92I	GRCGYC	2 cut(s)	572, 976
Hsp92II	CATG	3 cut(s)	449, 783, 1081
HspAI	GCGC	2 cut(s)	91, 307
Kpn2I	TCCGGA	1 cut(s)	757
KpnI	GGTACC	1 cut(s)	55
Kzo9I	GATC	3 cut(s)	385, 411, 794
LmnI	GCTCC	6 cut(s)	103, 225, 350, 598, 610, 709
Lsp1109I	GCAGC	1 cut(s)	255
LweI	GCATC	4 cut(s)	64, 143, 324, 718
MaeI	CTAG	3 cut(s)	773, 912, 1062
MaeII	ACGT	4 cut(s)	66, 424, 487, 976
MaeIII	GTNAC	3 cut(s)	181, 365, 821
MalI	GATC	3 cut(s)	387, 413, 796
MboI	GATC	3 cut(s)	385, 411, 794
MboII	GAAGA	7 cut(s)	83, 644, 701, 713, 737, 749, 933
MflI	RGATCY	2 cut(s)	385, 794
MhlI	GDGCHC	4 cut(s)	108, 355, 595, 682
MlsI	TGGCCA	1 cut(s)	627
MluCI	AATT	3 cut(s)	81, 581, 1007
MluNI	TGGCCA	1 cut(s)	627
MlyI	GAGTC	2 cut(s)	995, 1034
MmeI	TCCRAC	3 cut(s)	818, 906, 1042
Mox20I	TGGCCA	1 cut(s)	627
MroI	TCCGGA	1 cut(s)	757
MroXI	GAANNNNTTC	1 cut(s)	459
MscI	TGGCCA	1 cut(s)	627
MslI	CAYNNNNRTG	2 cut(s)	615, 666
Msp20I	TGGCCA	1 cut(s)	627
MspA1I	CMGCKG	1 cut(s)	1046
MspI	CCGG	5 cut(s)	56, 310, 758, 900, 934
MspR9I	CCNGG	5 cut(s)	56, 57, 512, 934, 1026
MvaI	CCWGG	2 cut(s)	512, 1026
MvnI	CGCG	3 cut(s)	91, 602, 750
MwoI	GCNNNNNNNGC	2 cut(s)	350, 599
NciI	CCSGG	3 cut(s)	56, 57, 934
NdeII	GATC	3 cut(s)	385, 411, 794
NlaIII	CATG	3 cut(s)	449, 783, 1081
NlaIV	GGNNCC	6 cut(s)	53, 352, 387, 559, 606, 648
NmuCI	GTSAC	2 cut(s)	365, 821
NspI	RCATGY	1 cut(s)	1081
NspV	TTCGAA	1 cut(s)	1005
PaqCI	CACCTGC	1 cut(s)	394
PciI	ACATGT	1 cut(s)	1077
PdmI	GAANNNNTTC	1 cut(s)	459
PfeI	GAWTC	4 cut(s)	438, 472, 640, 717
PflFI	GACNNNGTC	1 cut(s)	249
PflMI	CCANNNNNTGG	2 cut(s)	208, 406
PfoI	TCCNGGA	1 cut(s)	932
PkrI	GCNGC	3 cut(s)	270, 604, 890
PleI	GAGTC	2 cut(s)	994, 1034
PpsI	GAGTC	2 cut(s)	994, 1034
PscI	ACATGT	1 cut(s)	1077
Psp6I	CCWGG	2 cut(s)	510, 1024
PspEI	GGTNACC	1 cut(s)	181
PspFI	CCCAGC	2 cut(s)	208, 1046
PspGI	CCWGG	2 cut(s)	510, 1024
PspN4I	GGNNCC	6 cut(s)	53, 352, 387, 559, 606, 648
PspPI	GGNCC	5 cut(s)	199, 646, 658, 840, 890
PsuI	RGATCY	2 cut(s)	385, 794
PsyI	GACNNNGTC	1 cut(s)	249
PvuII	CAGCTG	1 cut(s)	1046
RsaI	GTAC	4 cut(s)	53, 243, 281, 444
RsaNI	GTAC	4 cut(s)	52, 242, 280, 443
RseI	CAYNNNNRTG	2 cut(s)	615, 666
SatI	GCNGC	3 cut(s)	269, 603, 889
Sau3AI	GATC	3 cut(s)	385, 411, 794
Sau96I	GGNCC	5 cut(s)	199, 646, 658, 840, 890
SchI	GAGTC	2 cut(s)	995, 1034
ScrFI	CCNGG	5 cut(s)	56, 57, 512, 934, 1026
SduI	GDGCHC	4 cut(s)	108, 355, 595, 682
SfaNI	GCATC	4 cut(s)	64, 143, 324, 718
SfuI	TTCGAA	1 cut(s)	1005
SinI	GGWCC	4 cut(s)	199, 646, 658, 840
SmaI	CCCGGG	1 cut(s)	57
SmiMI	CAYNNNNRTG	2 cut(s)	615, 666
SmlI	CTYRAG	1 cut(s)	109
SmoI	CTYRAG	1 cut(s)	109
Sse9I	AATT	3 cut(s)	81, 581, 1007
SsiI	CCGC	8 cut(s)	49, 89, 288, 344, 523, 602, 888, 1065
SspMI	CTAG	3 cut(s)	773, 912, 1062
StyD4I	CCNGG	5 cut(s)	54, 55, 510, 932, 1024
TaaI	ACNGT	4 cut(s)	251, 550, 827, 866
TaiI	ACGT	4 cut(s)	69, 427, 490, 979
TaqI	TCGA	8 cut(s)	69, 136, 234, 259, 543, 553, 1005, 1098
TasI	AATT	3 cut(s)	81, 581, 1007
TatI	WGTACW	1 cut(s)	279
TauI	GCSGC	2 cut(s)	605, 891
TfiI	GAWTC	4 cut(s)	438, 472, 640, 717
TscAI	CASTG	2 cut(s)	553, 857
TseFI	GTSAC	2 cut(s)	365, 821
TseI	GCWGC	1 cut(s)	268
Tsp45I	GTSAC	2 cut(s)	365, 821
TspDTI	ATGAA	6 cut(s)	25, 156, 308, 462, 738, 768
TspGWI	ACGGA	2 cut(s)	363, 398
TspMI	CCCGGG	1 cut(s)	55
TspRI	CASTG	2 cut(s)	553, 857
Tth111I	GACNNNGTC	1 cut(s)	249
Van91I	CCANNNNNTGG	2 cut(s)	208, 406
VpaK11BI	GGWCC	4 cut(s)	199, 646, 658, 840
XapI	RAATTY	1 cut(s)	81
XceI	RCATGY	1 cut(s)	1081
XmaI	CCCGGG	1 cut(s)	55
XmnI	GAANNNNTTC	1 cut(s)	459
XspI	CTAG	3 cut(s)	773, 912, 1062
ZraI	GACGTC	1 cut(s)	977

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.