Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0000124

Physical Location & Seq

Genomic Coordinates Forward (+)

27374961 .. 27376594

Gene Structure 1634 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG239600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1194 bp

ATGGCCGATTTCAGCACAATGTTTCACCCAAGCTTCATCGTCGTTGTGCTGTACCCGGGACAGAACGTCGAAGATGCGAAAATTCCACCGCGCTTTAGTAGGGAGCACTTGAGGGACGATGAGGATGGGGTCGCTCGACTGGTCTTGGATGGATGCAGGGAGTGTTCATATTATGTGAAGGTTACCCCACAAGGGCAGGACCATTGGCTGGGTTCTGGTTGGGGGAGCTTTCTCGAGAATGTCCGACACGGTCAGGGTCGAATGGTGCTGCTACTCCAGTACAAAGGCGGAATGAAGTTCGTCGTGCGCCGGTATGATGTGAACGGGGCGTTGATGTACGCTTCTCCTCGACCCAGATTCGGTCGCCCGCCTCCCACATCACCCACTATTAGGGGGGTATTCGATGGCTTCGTTTCTGACATTTGGGATCAGACGGTCACTGTGCCTGTCGTACCAAGAGGTGTCGTCCATGATAGGCTGATTGCGGACGGAGCCCCTGCTGTTTGTGACTTCCGATGGGAGACGGATCCTCCAGTATTACAGCAGGTGGAGATCACGGGAGGACGTAGGAAGCTAAGATTCGTACATGAATGGGAACGCTTTCACTTGGAGAATCGCTTGGGAAAACGTCGGTGCTGTGCGTTCACCTACCTGGGAAATCTCCGGTTCTCGGTTCTTGTGTTCGACACTGTTCGAGGAACCCTTTGCACGACGCCGCTGCAATTCACCCGTGCTCCAGACGCGGCTCCACATACCAATGGTATTGAGCAAGAAGAGGGGAATCTGGACCCTGAGGAGGACCGTAGGGATGAGGATGGGGCACGGGTGGAAGATATGGAGGAAGATATGGAGCAAGGAATCAATGAAGATGCAGTTGAAGAAGGCGACGACGAAACTCCGGAGGAAAGGGTGCCAGTTTCATGGCGTACAGGGAGATCCTGCCAATGCACAATCCAGAGATGTCACGGTTATCTACCAGCCAAGTTTGCTCAGTCCACATTTCGCAGACGAACACCAGTTCAGATAAAGGTGCAGAAATCCGACGGACGTCTGTGGAGAATGAAAGCCGTTCCATCCAATACCACTCACTACTTAAGTAAAGGGTACACCAAATTCAGGAAGGACCTCAGTCTGCCTATAGGGTCTGCAATCGAGCTCCATGTGGTTGACGGCAACAGATTGGTTTTCGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016553 GO:0016554 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR

Protein Analysis

397

Amino Acids

45.31

Weight (kDa)

6.29

Isoelectric Point (pI)

53.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B3	PF02362	321 - 390	4.4e-06	B3 DNA binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000124)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g10992 FvH4_2g25150 FvH4_2g27910 FvH4_2g27931 FvH4_4g09443 FvH4_4g09490 FvH4_4g15990 FvH4_4g15991 FvH4_6g07180 FvH4_6g40320 FvH4_7g10222 FvH4_7g10251
rosa_chinensis	RchiOBHm_Chr2g0155611
rosa_laevigata	RLG00000009253 RLG00000009254 RLG00000011848 RLG00000017301 RLG00000017302 RLG00000034909
rosa_multiflora	Rmu_co8063658.1_g000001 Rmu_co8240443.1_g000001 Rmu_co8264451.1_g000001 Rmu_co8381937.1_g000001 Rmu_co8419903.1_g000001 Rmu_co8513405.1_g000002 Rmu_co8522915.1_g000001 Rmu_co8522915.1_g000004 Rmu_sc0000279.1_g000024 Rmu_sc0000279.1_g000048 Rmu_sc0000642.1_g000017 Rmu_sc0002045.1_g000015 Rmu_sc0002045.1_g000018 Rmu_sc0002045.1_g000023 Rmu_sc0002045.1_g000028 Rmu_sc0003047.1_g000008 Rmu_sc0003179.1_g000019 Rmu_sc0003179.1_g000020 Rmu_sc0003179.1_g000022 Rmu_sc0003179.1_g000023 Rmu_sc0003422.1_g000011 Rmu_sc0004999.1_g000014 Rmu_sc0005712.1_g000018 Rmu_sc0005712.1_g000023 Rmu_sc0006198.1_g000019 Rmu_sc0006373.1_g000005 Rmu_sc0006514.1_g000028 Rmu_sc0006514.1_g000031 Rmu_sc0007367.1_g000010 Rmu_sc0011475.1_g000002 Rmu_sc0025304.1_g000001 Rmu_ssc0000161.1_g000030 Rmu_ssc0000161.1_g000032 Rmu_ssc0000387.1_g000018
rosa_roxburghii	Rroxscaffold_1G00031090 Rroxscaffold_1G00032770 Rroxscaffold_1G00068950 Rroxscaffold_1G00069000 Rroxscaffold_1G00069010 Rroxscaffold_2G00129060 Rroxscaffold_2G00129100 Rroxscaffold_4G00309310 Rroxscaffold_4G00309320 Rroxscaffold_5G00350620 Rroxscaffold_5G00350630 Rroxscaffold_7G00162650 Rroxscaffold_7G00162660 Rroxscaffold_7G00162710
rosa_rugosa	Rorug02G0564700 Rorug02G0564700 Rorug03G0343100 Rorug04G0189700 Rorug05G0102800 Rorug05G0102900 Rorug05G0103000 Rorug05G0106500 Rorug05G0106600 Rorug05G0106700 Rorug05G0252800 Rorug07G0182100 Rorug07G0283500 Rorug07G0283600
rosa_samantha	Rh1AG004000 Rh1AG004100 Rh1AG004200 Rh1AG004400 Rh1AG004500 Rh1AG004600 Rh1AG004800 Rh1AG004900 Rh1AG005300 Rh1AG007000 Rh1AG115000 Rh1CG049400 Rh1CG055400 Rh1CG111000 Rh1DG053600 Rh1DG053700 Rh1DG059300 Rh1DG119700 Rh1DG177100 Rh1DG177200 Rh2AG353800 Rh2AG354000 Rh2AG354100 Rh2AG354300 Rh2AG354400 Rh2AG354500 Rh2AG354600 Rh2AG354700 Rh2AG642300 Rh2AG642400 Rh2AG642500 Rh2BG336500 Rh2BG336600 Rh2BG336700 Rh2BG336800 Rh2BG336900 Rh2CG299900 Rh2CG300000 Rh2CG300100 Rh2DG337000 Rh2DG337100 Rh3AG246600 Rh3BG121900 Rh3BG122300 Rh3BG122600 Rh3BG122700 Rh3DG304800 Rh3DG304900 Rh4AG148800 Rh4AG249000 Rh4AG249100 Rh4AG249200 Rh4BG182700 Rh4BG182800 Rh4BG182900 Rh4BG254400 Rh4BG254500 Rh4BG254600 Rh4CG155500 Rh4CG155700 Rh4DG057900 Rh4DG058000 Rh4DG058100 Rh4DG058200 Rh4DG129100 Rh5AG364500 Rh5AG364600 Rh5AG364800 Rh5AG365300 Rh5CG363700 Rh5CG497600 Rh5DG239500 Rh5DG239600 Rh6AG173500 Rh6AG175400 Rh6BG075900 Rh6BG076300 Rh6BG076400 Rh6BG076500 Rh6BG076600 Rh6CG151000 Rh6CG151200 Rh6CG151300 Rh6CG151400 Rh6CG205200 Rh6CG205300 Rh6CG419700 Rh6CG419900 Rh6CG420100 Rh6DG498700 Rh6DG498800 Rh7AG329000 Rh7AG329100 Rh7AG329300 Rh7AG329400 Rh7AG353000 Rh7AG353100 Rh7AG353300 Rh7AG353400 Rh7AG353500 Rh7CG346400 Rh7CG346500 Rh7CG346700 Rh7CG370800 Rh7CG370900 Rh7CG371000 Rh7CG371100 Rh7DG325000 Rh7DG325100 Rh7DG325200 Rh7DG325300 Rh7DG353100 Rh7DG353200 Rh7DG353300 Rh7DG363500 Rh7DG364000
rosa_wichuraiana	Rw0G002290 Rw0G012780 Rw1G000260 Rw1G000270 Rw1G010400 Rw1G010410 Rw1G010420 Rw1G010430 Rw1G010440 Rw2G003210 Rw2G003220 Rw4G010970 Rw5G048520 Rw6G013320 Rw6G013470 Rw6G014940 Rw6G016570 Rw6G016590 Rw6G016600 Rw6G016610 Rw6G016620 Rw6G035450 Rw7G027760 Rw7G030460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	535
AatII	GACGTC	1 cut(s)	1051
Acc36I	ACCTGC	1 cut(s)	535
AccB1I	GGYRCC	1 cut(s)	910
AccB7I	CCANNNNNTGG	1 cut(s)	208
AccII	CGCG	2 cut(s)	91, 743
AccIII	TCCGGA	1 cut(s)	898
AciI	CCGC	6 cut(s)	89, 288, 368, 485, 716, 743
AclWI	GGATC	4 cut(s)	435, 521, 534, 930
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	2 cut(s)	81, 1112
AcyI	GRCGYC	2 cut(s)	713, 1048
AfaI	GTAC	7 cut(s)	53, 281, 338, 453, 585, 928, 1106
AfiI	CCNNNNNNNGG	7 cut(s)	192, 208, 359, 390, 670, 796, 1116
AflII	CTTAAG	1 cut(s)	1093
AgsI	TTSAA	1 cut(s)	878
AhdI	GACNNNNNGTC	1 cut(s)	65
AjnI	CCWGG	1 cut(s)	651
AluBI	AGCT	4 cut(s)	33, 228, 574, 1156
AluI	AGCT	4 cut(s)	33, 228, 574, 1156
Alw21I	GWGCWC	3 cut(s)	108, 736, 1158
Alw26I	GTCTC	1 cut(s)	515
AlwI	GGATC	4 cut(s)	435, 521, 534, 930
Ama87I	CYCGRG	2 cut(s)	55, 233
Aor13HI	TCCGGA	1 cut(s)	898
AoxI	GGCC	1 cut(s)	3
ApeKI	GCWGC	2 cut(s)	268, 718
ApoI	RAATTY	2 cut(s)	81, 1112
Asp700I	GAANNNNTTC	1 cut(s)	600
AspLEI	GCGC	2 cut(s)	93, 309
AspS9I	GGNCC	4 cut(s)	199, 787, 799, 1123
AsuC2I	CCSGG	2 cut(s)	56, 57
AsuHPI	GGTGA	4 cut(s)	17, 372, 637, 718
AvaI	CYCGRG	2 cut(s)	55, 233
AvaII	GGWCC	4 cut(s)	199, 787, 799, 1123
AxyI	CCTNAGG	1 cut(s)	792
BaeGI	GKGCMC	1 cut(s)	823
BamHI	GGATCC	1 cut(s)	526
BanI	GGYRCC	1 cut(s)	910
BanII	GRGCYC	2 cut(s)	496, 1158
Bbv12I	GWGCWC	3 cut(s)	108, 736, 1158
BbvI	GCAGC	2 cut(s)	255, 705
BccI	CCATC	6 cut(s)	119, 143, 398, 510, 809, 1081
BceAI	ACGGC	2 cut(s)	1052, 1186
BcgI	CGANNNNNNTGC	2 cut(s)	700, 734
BciT130I	CCWGG	1 cut(s)	653
BcnI	CCSGG	2 cut(s)	56, 57
BcoDI	GTCTC	1 cut(s)	515
BfmI	CTRYAG	1 cut(s)	1137
BfrI	CTTAAG	1 cut(s)	1093
BfuAI	ACCTGC	1 cut(s)	535
BisI	GCNGC	4 cut(s)	269, 716, 719, 744
BlsI	GCNGC	4 cut(s)	270, 717, 720, 745
Bme1390I	CCNGG	3 cut(s)	56, 57, 653
Bme18I	GGWCC	4 cut(s)	199, 787, 799, 1123
BmeRI	GACNNNNNGTC	1 cut(s)	65
BmeT110I	CYCGRG	2 cut(s)	55, 233
BmgT120I	GGNCC	4 cut(s)	199, 787, 799, 1123
BmiI	GGNNCC	6 cut(s)	493, 528, 700, 747, 789, 912
BmrFI	CCNGG	3 cut(s)	56, 57, 653
BmsI	GCATC	3 cut(s)	64, 143, 859
BoxI	GACNNNNGTC	2 cut(s)	1047, 1128
BpmI	CTGGAG	3 cut(s)	260, 516, 720
BpuEI	CTTGAG	1 cut(s)	130
BpuMI	CCSGG	2 cut(s)	56, 57
BsaHI	GRCGYC	2 cut(s)	713, 1048
BsaJI	CCNNGG	2 cut(s)	55, 652
BsaWI	WCCGGW	2 cut(s)	663, 898
BsaXI	ACNNNNNCTCC	4 cut(s)	514, 544, 718, 748
Bsc4I	CCNNNNNNNGG	7 cut(s)	192, 208, 359, 390, 670, 796, 1116
Bse118I	RCCGGY	1 cut(s)	309
Bse1I	ACTGG	5 cut(s)	144, 277, 533, 914, 1016
Bse21I	CCTNAGG	1 cut(s)	792
BseAI	TCCGGA	1 cut(s)	898
BseBI	CCWGG	1 cut(s)	653
BseDI	CCNNGG	2 cut(s)	55, 652
BseGI	GGATG	6 cut(s)	130, 154, 158, 814, 820, 1073
BseLI	CCNNNNNNNGG	7 cut(s)	192, 208, 359, 390, 670, 796, 1116
BseMII	CTCAG	3 cut(s)	783, 1004, 1141
BseNI	ACTGG	5 cut(s)	144, 277, 533, 914, 1016
BseRI	GAGGAG	2 cut(s)	336, 809
BseSI	GKGCMC	1 cut(s)	823
BseXI	GCAGC	2 cut(s)	255, 705
BseYI	CCCAGC	1 cut(s)	208
BsgI	GTGCAG	1 cut(s)	1052
Bsh1236I	CGCG	2 cut(s)	91, 743
Bsh1285I	CGRYCG	1 cut(s)	364
BshFI	GGCC	1 cut(s)	5
BshNI	GGYRCC	1 cut(s)	910
BsiEI	CGRYCG	1 cut(s)	364
BsiHKAI	GWGCWC	3 cut(s)	108, 736, 1158
BsiHKCI	CYCGRG	2 cut(s)	55, 233
BsiSI	CCGG	4 cut(s)	56, 310, 664, 899
BslFI	GGGAC	2 cut(s)	72, 128
BslI	CCNNNNNNNGG	7 cut(s)	192, 208, 359, 390, 670, 796, 1116
BsmAI	GTCTC	1 cut(s)	515
BsmBI	CGTCTC	1 cut(s)	515
BsmFI	GGGAC	2 cut(s)	72, 128
BsnI	GGCC	1 cut(s)	5
BsoBI	CYCGRG	2 cut(s)	55, 233
Bsp1286I	GDGCHC	5 cut(s)	108, 496, 736, 823, 1158
Bsp13I	TCCGGA	1 cut(s)	898
Bsp143I	GATC	4 cut(s)	427, 526, 552, 935
BspACI	CCGC	6 cut(s)	89, 288, 368, 485, 716, 743
BspANI	GGCC	1 cut(s)	5
BspCNI	CTCAG	3 cut(s)	784, 1003, 1140
BspEI	TCCGGA	1 cut(s)	898
BspFNI	CGCG	2 cut(s)	91, 743
BspLI	GGNNCC	6 cut(s)	493, 528, 700, 747, 789, 912
BspMI	ACCTGC	1 cut(s)	535
BspPI	GGATC	4 cut(s)	435, 521, 534, 930
BspT107I	GGYRCC	1 cut(s)	910
BspTI	CTTAAG	1 cut(s)	1093
BsrFI	RCCGGY	1 cut(s)	309
BsrI	ACTGG	5 cut(s)	144, 277, 533, 914, 1016
BssAI	RCCGGY	1 cut(s)	309
BssECI	CCNNGG	2 cut(s)	55, 652
BssMI	GATC	4 cut(s)	427, 526, 552, 935
BssNI	GRCGYC	2 cut(s)	713, 1048
Bst2UI	CCWGG	1 cut(s)	653
Bst4CI	ACNGT	6 cut(s)	251, 436, 442, 691, 803, 968
Bst6I	CTCTTC	1 cut(s)	768
BstACI	GRCGYC	2 cut(s)	713, 1048
BstAFI	CTTAAG	1 cut(s)	1093
BstC8I	GCNNGC	1 cut(s)	368
BstDEI	CTNAG	4 cut(s)	575, 792, 990, 1127
BstEII	GGTNACC	1 cut(s)	181
BstF5I	GGATG	6 cut(s)	130, 154, 158, 814, 820, 1073
BstFNI	CGCG	2 cut(s)	91, 743
BstHHI	GCGC	2 cut(s)	93, 309
BstKTI	GATC	4 cut(s)	430, 529, 555, 938
BstMAI	GTCTC	1 cut(s)	515
BstMBI	GATC	4 cut(s)	427, 526, 552, 935
BstMCI	CGRYCG	1 cut(s)	364
BstMWI	GCNNNNNNNGC	3 cut(s)	491, 740, 986
BstNI	CCWGG	1 cut(s)	653
BstPAI	GACNNNNGTC	2 cut(s)	1047, 1128
BstPI	GGTNACC	1 cut(s)	181
BstSCI	CCNGG	3 cut(s)	54, 55, 651
BstSFI	CTRYAG	1 cut(s)	1137
BstSLI	GKGCMC	1 cut(s)	823
BstUI	CGCG	2 cut(s)	91, 743
BstV1I	GCAGC	2 cut(s)	255, 705
BstX2I	RGATCY	2 cut(s)	526, 935
BstXI	CCANNNNNNTGG	1 cut(s)	921
BstYI	RGATCY	2 cut(s)	526, 935
Bsu36I	CCTNAGG	1 cut(s)	792
BsuRI	GGCC	1 cut(s)	5
BtsCI	GGATG	6 cut(s)	130, 154, 158, 814, 820, 1073
BtsIMutI	CAGTG	2 cut(s)	438, 687
BveI	ACCTGC	1 cut(s)	535
Cac8I	GCNNGC	1 cut(s)	368
CfoI	GCGC	2 cut(s)	93, 309
Cfr10I	RCCGGY	1 cut(s)	309
Cfr13I	GGNCC	4 cut(s)	199, 787, 799, 1123
Cfr9I	CCCGGG	1 cut(s)	55
CseI	GACGC	2 cut(s)	721, 749
Csp6I	GTAC	7 cut(s)	52, 280, 337, 452, 584, 927, 1105
CviAII	CATG	4 cut(s)	470, 587, 921, 1160
CviQI	GTAC	7 cut(s)	52, 280, 337, 452, 584, 927, 1105
DdeI	CTNAG	4 cut(s)	575, 792, 990, 1127
DpnI	GATC	4 cut(s)	429, 528, 554, 937
DpnII	GATC	4 cut(s)	427, 526, 552, 935
DriI	GACNNNNNGTC	1 cut(s)	65
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	1 cut(s)	768
Eam1105I	GACNNNNNGTC	1 cut(s)	65
EarI	CTCTTC	1 cut(s)	768
EciI	GGCGGA	1 cut(s)	303
Ecl136II	GAGCTC	1 cut(s)	1156
Eco24I	GRGCYC	2 cut(s)	496, 1158
Eco47I	GGWCC	4 cut(s)	199, 787, 799, 1123
Eco53kI	GAGCTC	1 cut(s)	1156
Eco81I	CCTNAGG	1 cut(s)	792
Eco88I	CYCGRG	2 cut(s)	55, 233
Eco91I	GGTNACC	1 cut(s)	181
EcoICRI	GAGCTC	1 cut(s)	1156
EcoO109I	RGGNCCY	1 cut(s)	1123
EcoO65I	GGTNACC	1 cut(s)	181
EcoRII	CCWGG	1 cut(s)	651
EcoT38I	GRGCYC	2 cut(s)	496, 1158
Esp3I	CGTCTC	1 cut(s)	515
FaeI	CATG	4 cut(s)	473, 590, 924, 1163
FaqI	GGGAC	2 cut(s)	72, 128
FatI	CATG	4 cut(s)	469, 586, 920, 1159
FauI	CCCGC	1 cut(s)	375
Fnu4HI	GCNGC	4 cut(s)	269, 716, 719, 744
FokI	GGATG	6 cut(s)	137, 161, 165, 821, 827, 1060
FriOI	GRGCYC	2 cut(s)	496, 1158
Fsp4HI	GCNGC	4 cut(s)	269, 716, 719, 744
GlaI	GCGC	2 cut(s)	92, 308
GluI	GCNGC	4 cut(s)	269, 716, 719, 744
GsaI	CCCAGC	1 cut(s)	212
GsuI	CTGGAG	3 cut(s)	260, 516, 720
HaeIII	GGCC	1 cut(s)	5
HapII	CCGG	4 cut(s)	56, 310, 664, 899
HgaI	GACGC	2 cut(s)	721, 749
HhaI	GCGC	2 cut(s)	93, 309
Hin1I	GRCGYC	2 cut(s)	713, 1048
Hin1II	CATG	4 cut(s)	473, 590, 924, 1163
Hin6I	GCGC	2 cut(s)	91, 307
HinP1I	GCGC	2 cut(s)	91, 307
HincII	GTYRAC	1 cut(s)	1168
HindII	GTYRAC	1 cut(s)	1168
HindIII	AAGCTT	1 cut(s)	31
HinfI	GANTC	5 cut(s)	357, 579, 613, 781, 858
HpaII	CCGG	4 cut(s)	56, 310, 664, 899
HphI	GGTGA	4 cut(s)	17, 372, 637, 718
Hpy166II	GTNNAC	5 cut(s)	322, 645, 996, 1107, 1168
Hpy188I	TCNGA	6 cut(s)	245, 418, 432, 515, 1023, 1042
Hpy188III	TCNNGA	7 cut(s)	233, 235, 737, 785, 899, 955, 1117
Hpy8I	GTNNAC	5 cut(s)	322, 645, 996, 1107, 1168
Hpy99I	CGWCG	8 cut(s)	44, 71, 305, 633, 715, 890, 893, 1046
HpyAV	CCTTC	3 cut(s)	172, 875, 1114
HpyCH4III	ACNGT	6 cut(s)	251, 436, 442, 691, 803, 968
HpyCH4IV	ACGT	4 cut(s)	66, 565, 628, 1048
HpyCH4V	TGCA	7 cut(s)	156, 708, 721, 872, 948, 1033, 1148
HpyF10VI	GCNNNNNNNGC	3 cut(s)	491, 740, 986
HpyF3I	CTNAG	4 cut(s)	575, 792, 990, 1127
HpySE526I	ACGT	4 cut(s)	66, 565, 628, 1048
Hsp92I	GRCGYC	2 cut(s)	713, 1048
Hsp92II	CATG	4 cut(s)	473, 590, 924, 1163
HspAI	GCGC	2 cut(s)	91, 307
Kpn2I	TCCGGA	1 cut(s)	898
Kzo9I	GATC	4 cut(s)	427, 526, 552, 935
LmnI	GCTCC	7 cut(s)	103, 225, 491, 739, 751, 850, 1161
Lsp1109I	GCAGC	2 cut(s)	255, 705
LweI	GCATC	3 cut(s)	64, 143, 859
MaeII	ACGT	4 cut(s)	66, 565, 628, 1048
MaeIII	GTNAC	4 cut(s)	181, 436, 506, 962
MalI	GATC	4 cut(s)	429, 528, 554, 937
MboI	GATC	4 cut(s)	427, 526, 552, 935
MboII	GAAGA	6 cut(s)	83, 785, 842, 854, 878, 890
MflI	RGATCY	2 cut(s)	526, 935
MhlI	GDGCHC	5 cut(s)	108, 496, 736, 823, 1158
MluCI	AATT	3 cut(s)	81, 722, 1112
MmeI	TCCRAC	2 cut(s)	268, 1065
MroI	TCCGGA	1 cut(s)	898
MroXI	GAANNNNTTC	1 cut(s)	600
MseI	TTAA	1 cut(s)	1094
MslI	CAYNNNNRTG	1 cut(s)	756
MspA1I	CMGCKG	1 cut(s)	718
MspCI	CTTAAG	1 cut(s)	1093
MspI	CCGG	4 cut(s)	56, 310, 664, 899
MspR9I	CCNGG	3 cut(s)	56, 57, 653
MvaI	CCWGG	1 cut(s)	653
MvnI	CGCG	2 cut(s)	91, 743
MwoI	GCNNNNNNNGC	3 cut(s)	491, 740, 986
NciI	CCSGG	2 cut(s)	56, 57
NdeII	GATC	4 cut(s)	427, 526, 552, 935
NlaIII	CATG	4 cut(s)	473, 590, 924, 1163
NlaIV	GGNNCC	6 cut(s)	493, 528, 700, 747, 789, 912
NmuCI	GTSAC	3 cut(s)	436, 506, 962
PaeR7I	CTCGAG	1 cut(s)	233
PaqCI	CACCTGC	1 cut(s)	535
PcsI	WCGNNNNNNNCGW	1 cut(s)	408
PdmI	GAANNNNTTC	1 cut(s)	600
PfeI	GAWTC	5 cut(s)	357, 579, 613, 781, 858
PflFI	GACNNNGTC	1 cut(s)	249
PflMI	CCANNNNNTGG	1 cut(s)	208
PkrI	GCNGC	4 cut(s)	270, 717, 720, 745
PpuMI	RGGWCCY	1 cut(s)	1123
PshAI	GACNNNNGTC	2 cut(s)	1047, 1128
Psp124BI	GAGCTC	1 cut(s)	1158
Psp5II	RGGWCCY	1 cut(s)	1123
Psp6I	CCWGG	1 cut(s)	651
PspEI	GGTNACC	1 cut(s)	181
PspFI	CCCAGC	1 cut(s)	208
PspGI	CCWGG	1 cut(s)	651
PspN4I	GGNNCC	6 cut(s)	493, 528, 700, 747, 789, 912
PspPI	GGNCC	4 cut(s)	199, 787, 799, 1123
PspPPI	RGGWCCY	1 cut(s)	1123
PsuI	RGATCY	2 cut(s)	526, 935
PsyI	GACNNNGTC	1 cut(s)	249
RsaI	GTAC	7 cut(s)	53, 281, 338, 453, 585, 928, 1106
RsaNI	GTAC	7 cut(s)	52, 280, 337, 452, 584, 927, 1105
RseI	CAYNNNNRTG	1 cut(s)	756
SacI	GAGCTC	1 cut(s)	1158
SaqAI	TTAA	1 cut(s)	1094
SatI	GCNGC	4 cut(s)	269, 716, 719, 744
Sau3AI	GATC	4 cut(s)	427, 526, 552, 935
Sau96I	GGNCC	4 cut(s)	199, 787, 799, 1123
ScrFI	CCNGG	3 cut(s)	56, 57, 653
SduI	GDGCHC	5 cut(s)	108, 496, 736, 823, 1158
SfaNI	GCATC	3 cut(s)	64, 143, 859
SfcI	CTRYAG	1 cut(s)	1137
Sfr274I	CTCGAG	1 cut(s)	233
SinI	GGWCC	4 cut(s)	199, 787, 799, 1123
SlaI	CTCGAG	1 cut(s)	233
SmaI	CCCGGG	1 cut(s)	57
SmiMI	CAYNNNNRTG	1 cut(s)	756
SmlI	CTYRAG	3 cut(s)	109, 233, 1093
SmoI	CTYRAG	3 cut(s)	109, 233, 1093
Sse9I	AATT	3 cut(s)	81, 722, 1112
SsiI	CCGC	6 cut(s)	89, 288, 368, 485, 716, 743
SstI	GAGCTC	1 cut(s)	1158
StyD4I	CCNGG	3 cut(s)	54, 55, 651
TaaI	ACNGT	6 cut(s)	251, 436, 442, 691, 803, 968
TaiI	ACGT	4 cut(s)	69, 568, 631, 1051
TaqII	GACCGA	1 cut(s)	350
TasI	AATT	3 cut(s)	81, 722, 1112
TatI	WGTACW	1 cut(s)	279
TauI	GCSGC	2 cut(s)	718, 746
TfiI	GAWTC	5 cut(s)	357, 579, 613, 781, 858
Tru1I	TTAA	1 cut(s)	1094
Tru9I	TTAA	1 cut(s)	1094
TscAI	CASTG	2 cut(s)	445, 694
TseFI	GTSAC	3 cut(s)	436, 506, 962
TseI	GCWGC	2 cut(s)	268, 718
Tsp45I	GTSAC	3 cut(s)	436, 506, 962
TspDTI	ATGAA	7 cut(s)	25, 156, 308, 603, 879, 909, 1076
TspGWI	ACGGA	3 cut(s)	504, 539, 1059
TspMI	CCCGGG	1 cut(s)	55
TspRI	CASTG	2 cut(s)	445, 694
Tth111I	GACNNNGTC	1 cut(s)	249
Van91I	CCANNNNNTGG	1 cut(s)	208
Vha464I	CTTAAG	1 cut(s)	1093
VpaK11BI	GGWCC	4 cut(s)	199, 787, 799, 1123
XapI	RAATTY	2 cut(s)	81, 1112
XhoI	CTCGAG	1 cut(s)	233
XmaI	CCCGGG	1 cut(s)	55
XmnI	GAANNNNTTC	1 cut(s)	600
ZraI	GACGTC	1 cut(s)	1049

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.