Rh3BG121900

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
OG0000124
Physical Location & Seq
Reverse (-)
10011705 .. 10014966
3262 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3BG121900.1

Sequence Viewer

Length: 1257 bp
ATGGCTTCGGCATCTACTGACAATTACCCCTACTTCATCCTGGTTGTTATGTCGTCGGGAAAGAACATTGAACGGGCGAAAATTCCACCAAGTTTTTCACACATGCACATGAAGGACGACAACCAACCGATCGCTGATCTGTATTTGGACGGATTACCGGACGTTCCGTACTTCGTCGAAATTACACCACAAGGATCGGACAAGTGGTTTGACGGTCATTGGACCACTTTTGTTAACCGTGTCAGCAATGGTCAAGGACGGATGGTGTTGTGGTTCCATTACAGAGGGAATATGACCTTCATCGCACGCCGCTTCGATGTTAACGGCCGGTTGATGCTCGGAGCTCCCAAACCGCCCTTTGGATTTGTGGTGGACCAGTCAATGGAGCTGACTGGTATTTTGGACTCGTTCATGTCGGACATTTGGGATCGGAAAGTAACTGTGCCTATTGTACGAAGAGGTTCTCTGCGTGACAAGCTAGTGGCAGACGGTGGGCCGGGCAGATGTGAGCTCCGTTGGGAAACAATTCCGTCAAGGCGGTGGACAGTTCACATGACAGGAAAGAAAGAGTTGACATTCGGTTCTGGATGGGACCGCTTTCAAACGGATGCAGGGTTGGACGATTCTCTGTGCTGTGTTTTCACGCGCATTGGTCGATTGTGTTTCTCTGTTCAAGTATTCAACATCAAGAGAGGGATTCTGTCAATGAATCTCAGCCAAGCAGGCCTATCTAGAACTCTCCCCGATGTCAAAACAGAGGATGAAGCCTCAATTGAAGAAGAAGCCGCAGTTGGGGCCGATGTAGGGGGGCAGCTATATGAACCGGATATGGGACCCTTTGGTGAGCTTCCTCAAAGGGAACGCGTCCACACTGGATGGGCTGGATTCCGCTCTGGCACTTGTAAGATTCAACAATCTCATGGGGCTTTCCGTTCTGACTTTGCTCGTAGCCTATTTGGAGATGATGAGAGACGTGTGATAAAGGTGCAGAAATCAAATGGCCGGGTGTGGCGAATCAAGGTGGTCCCAAGCAACACAACTCATGTTTTGAGTGCGGGCTACACTAAAATGAAGGATGCTCTCGGACTGCCGGATGATAAACGCCTAGCACGGCGTGGGTTGAACTTCATGCCTGCGGTTGGGAGACTTCCATTTTTGTTCAAATATTCTTGTGCCAACCATGCAGATGCTACATCATATGGGACTTCCTCTGCAGCGGCTTCAAAGACCAGTTGCAGATCTTCATTCTTTGGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

418

Amino Acids

46.74

Weight (kDa)

9.17

Isoelectric Point (pI)

47.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000124)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g10992 FvH4_2g25150 FvH4_2g27910 FvH4_2g27931 FvH4_4g09443 FvH4_4g09490 FvH4_4g15990 FvH4_4g15991 FvH4_6g07180 FvH4_6g40320 FvH4_7g10222 FvH4_7g10251
rosa_chinensis RchiOBHm_Chr2g0155611
rosa_laevigata RLG00000009253 RLG00000009254 RLG00000011848 RLG00000017301 RLG00000017302 RLG00000034909
rosa_multiflora Rmu_co8063658.1_g000001 Rmu_co8240443.1_g000001 Rmu_co8264451.1_g000001 Rmu_co8381937.1_g000001 Rmu_co8419903.1_g000001 Rmu_co8513405.1_g000002 Rmu_co8522915.1_g000001 Rmu_co8522915.1_g000004 Rmu_sc0000279.1_g000024 Rmu_sc0000279.1_g000048 Rmu_sc0000642.1_g000017 Rmu_sc0002045.1_g000015 Rmu_sc0002045.1_g000018 Rmu_sc0002045.1_g000023 Rmu_sc0002045.1_g000028 Rmu_sc0003047.1_g000008 Rmu_sc0003179.1_g000019 Rmu_sc0003179.1_g000020 Rmu_sc0003179.1_g000022 Rmu_sc0003179.1_g000023 Rmu_sc0003422.1_g000011 Rmu_sc0004999.1_g000014 Rmu_sc0005712.1_g000018 Rmu_sc0005712.1_g000023 Rmu_sc0006198.1_g000019 Rmu_sc0006373.1_g000005 Rmu_sc0006514.1_g000028 Rmu_sc0006514.1_g000031 Rmu_sc0007367.1_g000010 Rmu_sc0011475.1_g000002 Rmu_sc0025304.1_g000001 Rmu_ssc0000161.1_g000030 Rmu_ssc0000161.1_g000032 Rmu_ssc0000387.1_g000018
rosa_roxburghii Rroxscaffold_1G00031090 Rroxscaffold_1G00032770 Rroxscaffold_1G00068950 Rroxscaffold_1G00069000 Rroxscaffold_1G00069010 Rroxscaffold_2G00129060 Rroxscaffold_2G00129100 Rroxscaffold_4G00309310 Rroxscaffold_4G00309320 Rroxscaffold_5G00350620 Rroxscaffold_5G00350630 Rroxscaffold_7G00162650 Rroxscaffold_7G00162660 Rroxscaffold_7G00162710
rosa_rugosa Rorug02G0564700 Rorug02G0564700 Rorug03G0343100 Rorug04G0189700 Rorug05G0102800 Rorug05G0102900 Rorug05G0103000 Rorug05G0106500 Rorug05G0106600 Rorug05G0106700 Rorug05G0252800 Rorug07G0182100 Rorug07G0283500 Rorug07G0283600
rosa_samantha Rh1AG004000 Rh1AG004100 Rh1AG004200 Rh1AG004400 Rh1AG004500 Rh1AG004600 Rh1AG004800 Rh1AG004900 Rh1AG005300 Rh1AG007000 Rh1AG115000 Rh1CG049400 Rh1CG055400 Rh1CG111000 Rh1DG053600 Rh1DG053700 Rh1DG059300 Rh1DG119700 Rh1DG177100 Rh1DG177200 Rh2AG353800 Rh2AG354000 Rh2AG354100 Rh2AG354300 Rh2AG354400 Rh2AG354500 Rh2AG354600 Rh2AG354700 Rh2AG642300 Rh2AG642400 Rh2AG642500 Rh2BG336500 Rh2BG336600 Rh2BG336700 Rh2BG336800 Rh2BG336900 Rh2CG299900 Rh2CG300000 Rh2CG300100 Rh2DG337000 Rh2DG337100 Rh3AG246600 Rh3BG121900 Rh3BG122300 Rh3BG122600 Rh3BG122700 Rh3DG304800 Rh3DG304900 Rh4AG148800 Rh4AG249000 Rh4AG249100 Rh4AG249200 Rh4BG182700 Rh4BG182800 Rh4BG182900 Rh4BG254400 Rh4BG254500 Rh4BG254600 Rh4CG155500 Rh4CG155700 Rh4DG057900 Rh4DG058000 Rh4DG058100 Rh4DG058200 Rh4DG129100 Rh5AG364500 Rh5AG364600 Rh5AG364800 Rh5AG365300 Rh5CG363700 Rh5CG497600 Rh5DG239500 Rh5DG239600 Rh6AG173500 Rh6AG175400 Rh6BG075900 Rh6BG076300 Rh6BG076400 Rh6BG076500 Rh6BG076600 Rh6CG151000 Rh6CG151200 Rh6CG151300 Rh6CG151400 Rh6CG205200 Rh6CG205300 Rh6CG419700 Rh6CG419900 Rh6CG420100 Rh6DG498700 Rh6DG498800 Rh7AG329000 Rh7AG329100 Rh7AG329300 Rh7AG329400 Rh7AG353000 Rh7AG353100 Rh7AG353300 Rh7AG353400 Rh7AG353500 Rh7CG346400 Rh7CG346500 Rh7CG346700 Rh7CG370800 Rh7CG370900 Rh7CG371000 Rh7CG371100 Rh7DG325000 Rh7DG325100 Rh7DG325200 Rh7DG325300 Rh7DG353100 Rh7DG353200 Rh7DG353300 Rh7DG363500 Rh7DG364000
rosa_wichuraiana Rw0G002290 Rw0G012780 Rw1G000260 Rw1G000270 Rw1G010400 Rw1G010410 Rw1G010420 Rw1G010430 Rw1G010440 Rw2G003210 Rw2G003220 Rw4G010970 Rw5G048520 Rw6G013320 Rw6G013470 Rw6G014940 Rw6G016570 Rw6G016590 Rw6G016600 Rw6G016610 Rw6G016620 Rw6G035450 Rw7G027760 Rw7G030460

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 382
AccBSI CCGCTC 1 cut(s) 891
AccII CGCG 2 cut(s) 646, 864
AciI CCGC 9 cut(s) 310, 353, 538, 595, 786, 889, 1055, 1136, 1217
AclWI GGATC 2 cut(s) 202, 435
AcoI YGGCCR 2 cut(s) 325, 1000
AcsI RAATTY 1 cut(s) 81
AdeI CACNNNGTG 1 cut(s) 1115
AfaI GTAC 2 cut(s) 170, 453
AfiI CCNNNNNNNGG 6 cut(s) 359, 382, 792, 804, 830, 1139
AflIII ACRYGT 2 cut(s) 862, 973
AgsI TTSAA 9 cut(s) 71, 602, 674, 682, 776, 911, 1123, 1162, 1224
AjiI CACGTC 1 cut(s) 974
AjnI CCWGG 1 cut(s) 39
AjuI GAANNNNNNNTTGG 2 cut(s) 774, 806
AluBI AGCT 6 cut(s) 344, 388, 478, 511, 814, 847
AluI AGCT 6 cut(s) 344, 388, 478, 511, 814, 847
Alw21I GWGCWC 2 cut(s) 346, 513
Alw26I GTCTC 2 cut(s) 964, 1138
AlwI GGATC 2 cut(s) 202, 435
AoxI GGCC 5 cut(s) 325, 494, 724, 795, 1000
ApeKI GCWGC 2 cut(s) 811, 1214
ApoI RAATTY 1 cut(s) 81
ArsI GACNNNNNNTTYG 4 cut(s) 191, 223, 382, 414
Asp700I GAANNNNTTC 2 cut(s) 460, 525
AspLEI GCGC 1 cut(s) 648
AspS9I GGNCC 7 cut(s) 222, 373, 494, 592, 795, 833, 1024
AsuC2I CCSGG 2 cut(s) 498, 1004
AsuHPI GGTGA 1 cut(s) 854
AvaII GGWCC 5 cut(s) 222, 373, 592, 833, 1024
BanII GRGCYC 2 cut(s) 346, 513
Bbv12I GWGCWC 2 cut(s) 346, 513
BbvI GCAGC 2 cut(s) 823, 1226
BccI CCATC 3 cut(s) 256, 582, 870
BceAI ACGGC 2 cut(s) 340, 1127
BciT130I CCWGG 1 cut(s) 41
BcnI CCSGG 2 cut(s) 498, 1004
BcoDI GTCTC 2 cut(s) 964, 1138
BfaI CTAG 3 cut(s) 479, 732, 1106
BfmI CTRYAG 1 cut(s) 1212
BglI GCCNNNNNGGC 1 cut(s) 723
BglII AGATCT 1 cut(s) 1238
BisI GCNGC 5 cut(s) 310, 786, 812, 1215, 1218
BlsI GCNGC 5 cut(s) 311, 787, 813, 1216, 1219
Bme1390I CCNGG 3 cut(s) 41, 498, 1004
Bme18I GGWCC 5 cut(s) 222, 373, 592, 833, 1024
BmgBI CACGTC 1 cut(s) 974
BmgT120I GGNCC 7 cut(s) 222, 373, 494, 592, 795, 833, 1024
BmiI GGNNCC 6 cut(s) 275, 593, 796, 834, 835, 1026
BmrFI CCNGG 3 cut(s) 41, 498, 1004
BmsI GCATC 5 cut(s) 20, 324, 598, 1066, 1177
BpuMI CCSGG 2 cut(s) 498, 1004
BsaWI WCCGGW 2 cut(s) 157, 823
Bsc4I CCNNNNNNNGG 6 cut(s) 359, 382, 792, 804, 830, 1139
Bse118I RCCGGY 1 cut(s) 327
Bse1I ACTGG 4 cut(s) 376, 397, 877, 1230
Bse3DI GCAATG 1 cut(s) 253
BseBI CCWGG 1 cut(s) 41
BseGI GGATG 8 cut(s) 36, 267, 593, 613, 766, 881, 1081, 1099
BseLI CCNNNNNNNGG 6 cut(s) 359, 382, 792, 804, 830, 1139
BseMI GCAATG 1 cut(s) 253
BseMII CTCAG 1 cut(s) 727
BseNI ACTGG 4 cut(s) 376, 397, 877, 1230
BseX3I CGGCCG 1 cut(s) 325
BseXI GCAGC 2 cut(s) 823, 1226
BsgI GTGCAG 1 cut(s) 1007
Bsh1236I CGCG 2 cut(s) 646, 864
Bsh1285I CGRYCG 2 cut(s) 132, 328
BshFI GGCC 5 cut(s) 327, 496, 726, 797, 1002
BsiEI CGRYCG 2 cut(s) 132, 328
BsiHKAI GWGCWC 2 cut(s) 346, 513
BsiSI CCGG 6 cut(s) 158, 328, 497, 824, 1003, 1091
BslFI GGGAC 4 cut(s) 605, 846, 1010, 1216
BslI CCNNNNNNNGG 6 cut(s) 359, 382, 792, 804, 830, 1139
BsmAI GTCTC 2 cut(s) 964, 1138
BsmBI CGTCTC 1 cut(s) 964
BsmFI GGGAC 4 cut(s) 605, 846, 1010, 1216
BsnI GGCC 5 cut(s) 327, 496, 726, 797, 1002
Bsp1286I GDGCHC 2 cut(s) 346, 513
Bsp143I GATC 5 cut(s) 129, 136, 194, 427, 1238
BspACI CCGC 9 cut(s) 310, 353, 538, 595, 786, 889, 1055, 1136, 1217
BspANI GGCC 5 cut(s) 327, 496, 726, 797, 1002
BspCNI CTCAG 1 cut(s) 726
BspFNI CGCG 2 cut(s) 646, 864
BspLI GGNNCC 6 cut(s) 275, 593, 796, 834, 835, 1026
BspMAI CTGCAG 1 cut(s) 1216
BspPI GGATC 2 cut(s) 202, 435
BsrBI CCGCTC 1 cut(s) 891
BsrDI GCAATG 1 cut(s) 253
BsrFI RCCGGY 1 cut(s) 327
BsrI ACTGG 4 cut(s) 376, 397, 877, 1230
BssAI RCCGGY 1 cut(s) 327
BssMI GATC 5 cut(s) 129, 136, 194, 427, 1238
Bst2UI CCWGG 1 cut(s) 41
Bst4CI ACNGT 5 cut(s) 215, 239, 442, 491, 547
Bst6I CTCTTC 1 cut(s) 451
BstC8I GCNNGC 4 cut(s) 307, 724, 1057, 1134
BstDEI CTNAG 1 cut(s) 713
BstF5I GGATG 8 cut(s) 36, 267, 593, 613, 766, 881, 1081, 1099
BstFNI CGCG 2 cut(s) 646, 864
BstHHI GCGC 1 cut(s) 648
BstKTI GATC 5 cut(s) 132, 139, 197, 430, 1241
BstMAI GTCTC 2 cut(s) 964, 1138
BstMBI GATC 5 cut(s) 129, 136, 194, 427, 1238
BstMCI CGRYCG 2 cut(s) 132, 328
BstMWI GCNNNNNNNGC 4 cut(s) 475, 723, 794, 1181
BstNI CCWGG 1 cut(s) 41
BstNSI RCATGY 1 cut(s) 106
BstSCI CCNGG 3 cut(s) 39, 496, 1002
BstSFI CTRYAG 1 cut(s) 1212
BstUI CGCG 2 cut(s) 646, 864
BstV1I GCAGC 2 cut(s) 823, 1226
BstX2I RGATCY 1 cut(s) 1238
BstYI RGATCY 1 cut(s) 1238
BstZI CGGCCG 1 cut(s) 325
BsuRI GGCC 5 cut(s) 327, 496, 726, 797, 1002
BtgZI GCGATG 1 cut(s) 286
BtrI CACGTC 1 cut(s) 974
BtsCI GGATG 8 cut(s) 36, 267, 593, 613, 766, 881, 1081, 1099
BtsIMutI CAGTG 1 cut(s) 870
Cac8I GCNNGC 4 cut(s) 307, 724, 1057, 1134
CfoI GCGC 1 cut(s) 648
Cfr10I RCCGGY 1 cut(s) 327
Cfr13I GGNCC 7 cut(s) 222, 373, 494, 592, 795, 833, 1024
CseI GACGC 1 cut(s) 853
Csp6I GTAC 2 cut(s) 169, 452
CviAII CATG 8 cut(s) 103, 109, 412, 553, 920, 1043, 1129, 1181
CviQI GTAC 2 cut(s) 169, 452
DdeI CTNAG 1 cut(s) 713
DpnI GATC 5 cut(s) 131, 138, 196, 429, 1240
DpnII GATC 5 cut(s) 129, 136, 194, 427, 1238
DraIII CACNNNGTG 1 cut(s) 1115
EaeI YGGCCR 2 cut(s) 325, 1000
EagI CGGCCG 1 cut(s) 325
Eam1104I CTCTTC 1 cut(s) 451
EarI CTCTTC 1 cut(s) 451
Ecl136II GAGCTC 2 cut(s) 344, 511
EclXI CGGCCG 1 cut(s) 325
Eco147I AGGCCT 1 cut(s) 726
Eco24I GRGCYC 2 cut(s) 346, 513
Eco47I GGWCC 5 cut(s) 222, 373, 592, 833, 1024
Eco52I CGGCCG 1 cut(s) 325
Eco53kI GAGCTC 2 cut(s) 344, 511
EcoICRI GAGCTC 2 cut(s) 344, 511
EcoO109I RGGNCCY 1 cut(s) 833
EcoRII CCWGG 1 cut(s) 39
EcoT38I GRGCYC 2 cut(s) 346, 513
Esp3I CGTCTC 1 cut(s) 964
FaeI CATG 8 cut(s) 106, 112, 415, 556, 923, 1046, 1132, 1184
FaqI GGGAC 4 cut(s) 605, 846, 1010, 1216
FatI CATG 8 cut(s) 102, 108, 411, 552, 919, 1042, 1128, 1180
FauI CCCGC 1 cut(s) 1048
FauNDI CATATG 1 cut(s) 1198
Fnu4HI GCNGC 5 cut(s) 310, 786, 812, 1215, 1218
FokI GGATG 8 cut(s) 23, 274, 600, 620, 773, 888, 1088, 1106
FriOI GRGCYC 2 cut(s) 346, 513
Fsp4HI GCNGC 5 cut(s) 310, 786, 812, 1215, 1218
FspBI CTAG 3 cut(s) 479, 732, 1106
GlaI GCGC 1 cut(s) 647
GluI GCNGC 5 cut(s) 310, 786, 812, 1215, 1218
HaeIII GGCC 5 cut(s) 327, 496, 726, 797, 1002
HapII CCGG 6 cut(s) 158, 328, 497, 824, 1003, 1091
HgaI GACGC 1 cut(s) 853
HhaI GCGC 1 cut(s) 648
Hin1II CATG 8 cut(s) 106, 112, 415, 556, 923, 1046, 1132, 1184
Hin6I GCGC 1 cut(s) 646
HinP1I GCGC 1 cut(s) 646
HincII GTYRAC 3 cut(s) 235, 322, 573
HindII GTYRAC 3 cut(s) 235, 322, 573
HinfI GANTC 7 cut(s) 404, 623, 697, 709, 885, 907, 1014
HpaI GTTAAC 2 cut(s) 235, 322
HpaII CCGG 6 cut(s) 158, 328, 497, 824, 1003, 1091
HphI GGTGA 1 cut(s) 854
Hpy166II GTNNAC 7 cut(s) 235, 322, 373, 543, 550, 573, 868
Hpy188I TCNGA 6 cut(s) 199, 341, 418, 432, 937, 1085
Hpy188III TCNNGA 4 cut(s) 57, 585, 688, 732
Hpy8I GTNNAC 7 cut(s) 235, 322, 373, 543, 550, 573, 868
Hpy99I CGWCG 2 cut(s) 58, 179
HpyAV CCTTC 3 cut(s) 106, 307, 1066
HpyCH4III ACNGT 5 cut(s) 215, 239, 442, 491, 547
HpyCH4IV ACGT 2 cut(s) 162, 973
HpyCH4V TGCA 6 cut(s) 106, 611, 988, 1184, 1214, 1236
HpyF10VI GCNNNNNNNGC 4 cut(s) 475, 723, 794, 1181
HpyF3I CTNAG 1 cut(s) 713
HpySE526I ACGT 2 cut(s) 162, 973
Hsp92II CATG 8 cut(s) 106, 112, 415, 556, 923, 1046, 1132, 1184
HspAI GCGC 1 cut(s) 646
KflI GGGWCCC 1 cut(s) 833
KspAI GTTAAC 2 cut(s) 235, 322
Kzo9I GATC 5 cut(s) 129, 136, 194, 427, 1238
LmnI GCTCC 4 cut(s) 341, 349, 385, 516
Lsp1109I GCAGC 2 cut(s) 823, 1226
LweI GCATC 5 cut(s) 20, 324, 598, 1066, 1177
MaeI CTAG 3 cut(s) 479, 732, 1106
MaeII ACGT 2 cut(s) 162, 973
MaeIII GTNAC 2 cut(s) 436, 470
MalI GATC 5 cut(s) 131, 138, 196, 429, 1240
MbiI CCGCTC 1 cut(s) 891
MboI GATC 5 cut(s) 129, 136, 194, 427, 1238
MboII GAAGA 4 cut(s) 468, 788, 791, 1233
MfeI CAATTG 1 cut(s) 771
MflI RGATCY 1 cut(s) 1238
MhlI GDGCHC 2 cut(s) 346, 513
MluCI AATT 5 cut(s) 22, 81, 180, 525, 771
MluI ACGCGT 1 cut(s) 862
MlyI GAGTC 1 cut(s) 398
MmeI TCCRAC 2 cut(s) 396, 597
MnlI CCTC 7 cut(s) 278, 452, 686, 751, 778, 861, 1219
MroXI GAANNNNTTC 2 cut(s) 460, 525
MseI TTAA 2 cut(s) 234, 321
MslI CAYNNNNRTG 3 cut(s) 107, 1067, 1185
MspA1I CMGCKG 1 cut(s) 1217
MspI CCGG 6 cut(s) 158, 328, 497, 824, 1003, 1091
MspR9I CCNGG 3 cut(s) 41, 498, 1004
MunI CAATTG 1 cut(s) 771
MvaI CCWGG 1 cut(s) 41
MvnI CGCG 2 cut(s) 646, 864
MwoI GCNNNNNNNGC 4 cut(s) 475, 723, 794, 1181
NciI CCSGG 2 cut(s) 498, 1004
NdeI CATATG 1 cut(s) 1198
NdeII GATC 5 cut(s) 129, 136, 194, 427, 1238
NlaIII CATG 8 cut(s) 106, 112, 415, 556, 923, 1046, 1132, 1184
NlaIV GGNNCC 6 cut(s) 275, 593, 796, 834, 835, 1026
NmuCI GTSAC 1 cut(s) 470
NspI RCATGY 1 cut(s) 106
PceI AGGCCT 1 cut(s) 726
PdmI GAANNNNTTC 2 cut(s) 460, 525
PfeI GAWTC 6 cut(s) 623, 697, 709, 885, 907, 1014
PflMI CCANNNNNTGG 1 cut(s) 382
PkrI GCNGC 5 cut(s) 311, 787, 813, 1216, 1219
Ple19I CGATCG 1 cut(s) 132
PleI GAGTC 1 cut(s) 398
PpsI GAGTC 1 cut(s) 398
PpuMI RGGWCCY 1 cut(s) 833
Psp124BI GAGCTC 2 cut(s) 346, 513
Psp5II RGGWCCY 1 cut(s) 833
Psp6I CCWGG 1 cut(s) 39
PspGI CCWGG 1 cut(s) 39
PspN4I GGNNCC 6 cut(s) 275, 593, 796, 834, 835, 1026
PspPI GGNCC 7 cut(s) 222, 373, 494, 592, 795, 833, 1024
PspPPI RGGWCCY 1 cut(s) 833
PstI CTGCAG 1 cut(s) 1216
PsuI RGATCY 1 cut(s) 1238
PvuI CGATCG 1 cut(s) 132
RsaI GTAC 2 cut(s) 170, 453
RsaNI GTAC 2 cut(s) 169, 452
RseI CAYNNNNRTG 3 cut(s) 107, 1067, 1185
SacI GAGCTC 2 cut(s) 346, 513
SaqAI TTAA 2 cut(s) 234, 321
SatI GCNGC 5 cut(s) 310, 786, 812, 1215, 1218
Sau3AI GATC 5 cut(s) 129, 136, 194, 427, 1238
Sau96I GGNCC 7 cut(s) 222, 373, 494, 592, 795, 833, 1024
SchI GAGTC 1 cut(s) 398
ScrFI CCNGG 3 cut(s) 41, 498, 1004
SduI GDGCHC 2 cut(s) 346, 513
SfaNI GCATC 5 cut(s) 20, 324, 598, 1066, 1177
SfcI CTRYAG 1 cut(s) 1212
SinI GGWCC 5 cut(s) 222, 373, 592, 833, 1024
SmiMI CAYNNNNRTG 3 cut(s) 107, 1067, 1185
Sse9I AATT 5 cut(s) 22, 81, 180, 525, 771
SseBI AGGCCT 1 cut(s) 726
SsiI CCGC 9 cut(s) 310, 353, 538, 595, 786, 889, 1055, 1136, 1217
SspI AATATT 1 cut(s) 1166
SspMI CTAG 3 cut(s) 479, 732, 1106
SstI GAGCTC 2 cut(s) 346, 513
StuI AGGCCT 1 cut(s) 726
StyD4I CCNGG 3 cut(s) 39, 496, 1002
TaaI ACNGT 5 cut(s) 215, 239, 442, 491, 547
TaiI ACGT 2 cut(s) 165, 976
TaqI TCGA 3 cut(s) 177, 315, 655
TasI AATT 5 cut(s) 22, 81, 180, 525, 771
TauI GCSGC 3 cut(s) 312, 788, 1220
TfiI GAWTC 6 cut(s) 623, 697, 709, 885, 907, 1014
Tru1I TTAA 2 cut(s) 234, 321
Tru9I TTAA 2 cut(s) 234, 321
TscAI CASTG 1 cut(s) 877
TseFI GTSAC 1 cut(s) 470
TseI GCWGC 2 cut(s) 811, 1214
Tsp45I GTSAC 1 cut(s) 470
TspGWI ACGGA 7 cut(s) 156, 165, 274, 503, 519, 620, 920
TspRI CASTG 1 cut(s) 877
Van91I CCANNNNNTGG 1 cut(s) 382
VpaK11BI GGWCC 5 cut(s) 222, 373, 592, 833, 1024
XapI RAATTY 1 cut(s) 81
XbaI TCTAGA 1 cut(s) 731
XceI RCATGY 1 cut(s) 106
XmnI GAANNNNTTC 2 cut(s) 460, 525
XspI CTAG 3 cut(s) 479, 732, 1106
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.