FvH4_7g10251

protein desumoylation

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0000124
Physical Location & Seq
Forward (+)
9713086 .. 9716240
3155 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g10251.t1

Sequence Viewer

Length: 2148 bp
ATGGAGAAGAAAGAAGTGGGGATGTGGTCTCCAAATCCGAAAGGTGAAAGGACATATGTGGGGGGATGTGTGGCCCTAAGATGTAAGGTAAAGAGTAAAACAAACATTTCGGAGTTCAAATGGATAGTGAGCGAGATTAACGAAGCTAAAAGGGTTGCGGTGAGGGCGGTTGGTTTCGGGTATACGTTGGAAATAGGTTGTCATGACTTAGCACAAGCTATAATGGTCGAAACACTGCATCAAGTCGACCACATAGGTTTCAAGATCAGGATACACGATGTTATTTGCACCATAAACGGTGCAGAATTTGGACGTGTAACAGGGATATATGACAGTGATGAAGACGTGGTAATCGGTGACAGCAGTTGTGCTAAAGATTACGGACCAGAGGTGCTTCCGATGTGCGACGAGAACGGGAATATTACGACAGATTTGTTGACTAGCATAGTGAGGGAAAGGAATGAGGCAGACGACACGTTCATCATTGCATATGTCATGTTGGCACTTCATCATGTGATATACCCAGAAGTAGACCGTAATGTTCAGGTTAGATTGTTGAAGGCAGCAATGGAAACAAACAGAATAGTTAAGAAGAAGTGGGCTTCATTTGCGGTGAGCCGGCTGATGGAGGGTGTAAGGAGGCATAGAGAGGAACAAAAGGAGATTGTGACAGGGTGTATGCTATTTCTGCAGCTTCTATATTTGGACAAGGTGGGGGAGGTTGTTTTACCACCACAGGTGAAAACATGTCCTTTAATGTATTGGACGCCCAAGCTAATAGACGATCTAGTTGACAAAGTTAAAGATGTCGGAGGACACAGCAGTCCAACGGTGTTGTCTTTGAAGAGCAAGAGGACGAAGAAGTTTGAGGAAGCTGGATTTCAGAAGGGCCCAACTAGATTTAAGCTGAAGCAATCTGTCCACGAAGACATTTTGTACGTCCGGGTCAACGTGGACAGAGTCCAAAAGGAGATGTGCGTTATGAACGGGACTGTCAATGACATGTCATCGTACTTTGTGGAAATCAGCAAGGTAGTCTCACAAATAGCAGATGCAGTACACACGATCAAGGGTGAATGTGGTTCCAAAGCTGCCAAGACTCTGGGGTTCAAACGAAACCGACATGATAATGTCAAAGAGGAGGTCGTAGATGTGCAATACAAAACACGAACACAGCAGAGGATGACCTATCCCAAGAATAATGATGTCACTTGTGAAGGAGAGGTTCAATGCATCGGCCATGGGAACATAAGCGGAAAGGTAAACCTTTCTAAGGATGTGGTCACAGGTGACACAGTTAAGGCTCAAATGAAGCAAACAAATGCGGTTGACCGTAACAAACCAGTTCGTCATCATCAAGGTTACAGGCTACTGGTGGAGTCTAAAATTGGGATGGCGAACCATAGAAACGTGGGGGGACGTCTACATGTTACGGGGCCTTATAAGCTGTGGGAAAAAATGTCAGAATTGGATGAGAAGATTATCCGCTATGTCTGTATGGTTGGTATGAACATATCCGAAACTGATAAAAGTGAGTGTGTGGGAATATGTGCCAACAGTATGCAATCAATCACTCGGGCAGAGATAAGGTGTCTGCTGCCAAGCGTTTACATATCAGGAAGTGTAATAAATTACGTGGCTGCCTATCTAAACAATGGTGGAGGCAGGAACTGGTACTGGCCAACACATTTTAAGATATTCATACCAATTCATGATCCTCATATCGACAAAGGACATTGGGTGCTTGTCGTGGTCGACATGGTGAAAAAGGTTGCGGAAGTATGGGACAGCTTATGTGAAAGTGGATTGACTGCACGAAGAATTGACGGAATCTCAAAATTGCTGAAACACATAGACCGGGTTATGCTGTTTGAAAATTATATGTACTGTGATGGCAATAACAGTGTGGGAGATTTTCAAATTTTGGAGGCGGAGAACGTGCCAATTCAGCAGAACACATATGACTGTGGGATATATGTTATACAGAATATGCAACACTATGGGACAAACTGGGCATACGAGTATTCGTCAGATCAGCAAAGAGCCGTTATTTTACTGGATTGTGTGAAACCACCAAATAACGAGATGGGTAACGAAATATCCAAACGTAGCAAGGAGTTCACTCATGAGGGGGACAACAACACATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_C48

Protein Analysis

716

Amino Acids

80.96

Weight (kDa)

7.76

Isoelectric Point (pI)

29.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_C48 PF02902 566 - 667 1.1e-15 Ulp1 protease family, C-terminal catalytic domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000124)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g10992 FvH4_2g25150 FvH4_2g27910 FvH4_2g27931 FvH4_4g09443 FvH4_4g09490 FvH4_4g15990 FvH4_4g15991 FvH4_6g07180 FvH4_6g40320 FvH4_7g10222 FvH4_7g10251
rosa_chinensis RchiOBHm_Chr2g0155611
rosa_laevigata RLG00000009253 RLG00000009254 RLG00000011848 RLG00000017301 RLG00000017302 RLG00000034909
rosa_multiflora Rmu_co8063658.1_g000001 Rmu_co8240443.1_g000001 Rmu_co8264451.1_g000001 Rmu_co8381937.1_g000001 Rmu_co8419903.1_g000001 Rmu_co8513405.1_g000002 Rmu_co8522915.1_g000001 Rmu_co8522915.1_g000004 Rmu_sc0000279.1_g000024 Rmu_sc0000279.1_g000048 Rmu_sc0000642.1_g000017 Rmu_sc0002045.1_g000015 Rmu_sc0002045.1_g000018 Rmu_sc0002045.1_g000023 Rmu_sc0002045.1_g000028 Rmu_sc0003047.1_g000008 Rmu_sc0003179.1_g000019 Rmu_sc0003179.1_g000020 Rmu_sc0003179.1_g000022 Rmu_sc0003179.1_g000023 Rmu_sc0003422.1_g000011 Rmu_sc0004999.1_g000014 Rmu_sc0005712.1_g000018 Rmu_sc0005712.1_g000023 Rmu_sc0006198.1_g000019 Rmu_sc0006373.1_g000005 Rmu_sc0006514.1_g000028 Rmu_sc0006514.1_g000031 Rmu_sc0007367.1_g000010 Rmu_sc0011475.1_g000002 Rmu_sc0025304.1_g000001 Rmu_ssc0000161.1_g000030 Rmu_ssc0000161.1_g000032 Rmu_ssc0000387.1_g000018
rosa_roxburghii Rroxscaffold_1G00031090 Rroxscaffold_1G00032770 Rroxscaffold_1G00068950 Rroxscaffold_1G00069000 Rroxscaffold_1G00069010 Rroxscaffold_2G00129060 Rroxscaffold_2G00129100 Rroxscaffold_4G00309310 Rroxscaffold_4G00309320 Rroxscaffold_5G00350620 Rroxscaffold_5G00350630 Rroxscaffold_7G00162650 Rroxscaffold_7G00162660 Rroxscaffold_7G00162710
rosa_rugosa Rorug02G0564700 Rorug02G0564700 Rorug03G0343100 Rorug04G0189700 Rorug05G0102800 Rorug05G0102900 Rorug05G0103000 Rorug05G0106500 Rorug05G0106600 Rorug05G0106700 Rorug05G0252800 Rorug07G0182100 Rorug07G0283500 Rorug07G0283600
rosa_samantha Rh1AG004000 Rh1AG004100 Rh1AG004200 Rh1AG004400 Rh1AG004500 Rh1AG004600 Rh1AG004800 Rh1AG004900 Rh1AG005300 Rh1AG007000 Rh1AG115000 Rh1CG049400 Rh1CG055400 Rh1CG111000 Rh1DG053600 Rh1DG053700 Rh1DG059300 Rh1DG119700 Rh1DG177100 Rh1DG177200 Rh2AG353800 Rh2AG354000 Rh2AG354100 Rh2AG354300 Rh2AG354400 Rh2AG354500 Rh2AG354600 Rh2AG354700 Rh2AG642300 Rh2AG642400 Rh2AG642500 Rh2BG336500 Rh2BG336600 Rh2BG336700 Rh2BG336800 Rh2BG336900 Rh2CG299900 Rh2CG300000 Rh2CG300100 Rh2DG337000 Rh2DG337100 Rh3AG246600 Rh3BG121900 Rh3BG122300 Rh3BG122600 Rh3BG122700 Rh3DG304800 Rh3DG304900 Rh4AG148800 Rh4AG249000 Rh4AG249100 Rh4AG249200 Rh4BG182700 Rh4BG182800 Rh4BG182900 Rh4BG254400 Rh4BG254500 Rh4BG254600 Rh4CG155500 Rh4CG155700 Rh4DG057900 Rh4DG058000 Rh4DG058100 Rh4DG058200 Rh4DG129100 Rh5AG364500 Rh5AG364600 Rh5AG364800 Rh5AG365300 Rh5CG363700 Rh5CG497600 Rh5DG239500 Rh5DG239600 Rh6AG173500 Rh6AG175400 Rh6BG075900 Rh6BG076300 Rh6BG076400 Rh6BG076500 Rh6BG076600 Rh6CG151000 Rh6CG151200 Rh6CG151300 Rh6CG151400 Rh6CG205200 Rh6CG205300 Rh6CG419700 Rh6CG419900 Rh6CG420100 Rh6DG498700 Rh6DG498800 Rh7AG329000 Rh7AG329100 Rh7AG329300 Rh7AG329400 Rh7AG353000 Rh7AG353100 Rh7AG353300 Rh7AG353400 Rh7AG353500 Rh7CG346400 Rh7CG346500 Rh7CG346700 Rh7CG370800 Rh7CG370900 Rh7CG371000 Rh7CG371100 Rh7DG325000 Rh7DG325100 Rh7DG325200 Rh7DG325300 Rh7DG353100 Rh7DG353200 Rh7DG353300 Rh7DG363500 Rh7DG364000
rosa_wichuraiana Rw0G002290 Rw0G012780 Rw1G000260 Rw1G000270 Rw1G010400 Rw1G010410 Rw1G010420 Rw1G010430 Rw1G010440 Rw2G003210 Rw2G003220 Rw4G010970 Rw5G048520 Rw6G013320 Rw6G013470 Rw6G014940 Rw6G016570 Rw6G016590 Rw6G016600 Rw6G016610 Rw6G016620 Rw6G035450 Rw7G027760 Rw7G030460

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1443
AasI GACNNNNNNGTC 1 cut(s) 822
AatII GACGTC 1 cut(s) 1423
AccI GTMKAC 5 cut(s) 182, 246, 531, 1423, 1755
AciI CCGC 8 cut(s) 158, 167, 611, 1254, 1325, 1486, 1775, 1931
AclWI GGATC 1 cut(s) 1709
AcoI YGGCCR 2 cut(s) 1237, 1679
AcsI RAATTY 2 cut(s) 305, 1920
AcuI CTGAAG 1 cut(s) 929
AcyI GRCGYC 2 cut(s) 767, 1420
AfaI GTAC 5 cut(s) 938, 1013, 1059, 1676, 1886
AfiI CCNNNNNNNGG 2 cut(s) 625, 1273
AflIII ACRYGT 5 cut(s) 313, 474, 746, 1002, 1426
AgsI TTSAA 8 cut(s) 118, 262, 559, 844, 1111, 1229, 1874, 1919
AjiI CACGTC 2 cut(s) 314, 346
AluBI AGCT 9 cut(s) 146, 218, 694, 775, 875, 907, 1091, 1447, 1791
AluI AGCT 9 cut(s) 146, 218, 694, 775, 875, 907, 1091, 1447, 1791
Alw26I GTCTC 2 cut(s) 33, 1042
AlwI GGATC 1 cut(s) 1709
AlwNI CAGNNNCTG 1 cut(s) 1671
Ama87I CYCGRG 1 cut(s) 1575
AoxI GGCC 5 cut(s) 72, 889, 1237, 1436, 1679
ApaI GGGCCC 1 cut(s) 893
ApeKI GCWGC 5 cut(s) 563, 691, 1091, 1597, 1640
ApoI RAATTY 2 cut(s) 305, 1920
ArsI GACNNNNNNTTYG 2 cut(s) 1128, 1160
AspS9I GGNCC 5 cut(s) 73, 383, 889, 890, 1436
AsuC2I CCSGG 2 cut(s) 944, 1859
AsuHPI GGTGA 8 cut(s) 56, 172, 368, 625, 751, 1085, 1301, 1774
AvaI CYCGRG 1 cut(s) 1575
AvaII GGWCC 1 cut(s) 383
BaeGI GKGCMC 1 cut(s) 893
BalI TGGCCA 1 cut(s) 1681
BanII GRGCYC 1 cut(s) 893
BbsI GAAGAC 2 cut(s) 348, 933
BbvI GCAGC 5 cut(s) 575, 703, 1078, 1584, 1627
BccI CCATC 4 cut(s) 619, 1387, 1886, 2080
BceAI ACGGC 1 cut(s) 2030
BciVI GTATCC 1 cut(s) 264
BcnI CCSGG 2 cut(s) 944, 1859
BcoDI GTCTC 2 cut(s) 33, 1042
BfaI CTAG 3 cut(s) 441, 788, 897
BfmI CTRYAG 1 cut(s) 689
BfuI GTATCC 1 cut(s) 264
BisI GCNGC 5 cut(s) 564, 692, 1092, 1598, 1641
BlsI GCNGC 5 cut(s) 565, 693, 1093, 1599, 1642
Bme1390I CCNGG 2 cut(s) 944, 1859
Bme18I GGWCC 1 cut(s) 383
BmeT110I CYCGRG 1 cut(s) 1575
BmgBI CACGTC 2 cut(s) 314, 346
BmgT120I GGNCC 5 cut(s) 73, 383, 889, 890, 1436
BmiI GGNNCC 3 cut(s) 891, 1084, 1437
BmrFI CCNGG 2 cut(s) 944, 1859
BmrI ACTGGG 1 cut(s) 2020
BmsI GCATC 3 cut(s) 247, 1042, 1242
BmuI ACTGGG 1 cut(s) 2020
BpiI GAAGAC 2 cut(s) 348, 933
BpuMI CCSGG 2 cut(s) 944, 1859
BsaAI YACGTR 1 cut(s) 1636
BsaHI GRCGYC 2 cut(s) 767, 1420
BsaI GGTCTC 1 cut(s) 33
BsaJI CCNNGG 1 cut(s) 1240
Bsc4I CCNNNNNNNGG 2 cut(s) 625, 1273
Bse118I RCCGGY 1 cut(s) 618
Bse1I ACTGG 6 cut(s) 1343, 1377, 1676, 1682, 2015, 2061
Bse3DI GCAATG 2 cut(s) 483, 573
BseDI CCNNGG 1 cut(s) 1240
BseGI GGATG 6 cut(s) 27, 71, 1188, 1282, 1398, 1477
BseLI CCNNNNNNNGG 2 cut(s) 625, 1273
BseMI GCAATG 2 cut(s) 483, 573
BseNI ACTGG 6 cut(s) 1343, 1377, 1676, 1682, 2015, 2061
BseRI GAGGAG 1 cut(s) 1154
BseSI GKGCMC 1 cut(s) 893
BseXI GCAGC 5 cut(s) 575, 703, 1078, 1584, 1627
BsgI GTGCAG 2 cut(s) 321, 1797
BshFI GGCC 5 cut(s) 74, 891, 1239, 1438, 1681
BsiHKCI CYCGRG 1 cut(s) 1575
BsiSI CCGG 3 cut(s) 619, 943, 1858
BslFI GGGAC 4 cut(s) 1003, 1431, 1799, 2017
BslI CCNNNNNNNGG 2 cut(s) 625, 1273
BsmAI GTCTC 2 cut(s) 33, 1042
BsmFI GGGAC 4 cut(s) 1003, 1431, 1799, 2017
BsnI GGCC 5 cut(s) 74, 891, 1239, 1438, 1681
Bso31I GGTCTC 1 cut(s) 33
BsoBI CYCGRG 1 cut(s) 1575
Bsp120I GGGCCC 1 cut(s) 889
Bsp1286I GDGCHC 1 cut(s) 893
Bsp143I GATC 5 cut(s) 264, 784, 1065, 1714, 2032
Bsp19I CCATGG 1 cut(s) 1240
BspACI CCGC 8 cut(s) 158, 167, 611, 1254, 1325, 1486, 1775, 1931
BspANI GGCC 5 cut(s) 74, 891, 1239, 1438, 1681
BspHI TCATGA 3 cut(s) 202, 1711, 2125
BspLI GGNNCC 3 cut(s) 891, 1084, 1437
BspMAI CTGCAG 1 cut(s) 693
BspPI GGATC 1 cut(s) 1709
BspQI GCTCTTC 1 cut(s) 839
BspTNI GGTCTC 1 cut(s) 33
BsrDI GCAATG 2 cut(s) 483, 573
BsrFI RCCGGY 1 cut(s) 618
BsrI ACTGG 6 cut(s) 1343, 1377, 1676, 1682, 2015, 2061
BssAI RCCGGY 1 cut(s) 618
BssECI CCNNGG 1 cut(s) 1240
BssMI GATC 5 cut(s) 264, 784, 1065, 1714, 2032
BssNAI GTATAC 1 cut(s) 183
BssNI GRCGYC 2 cut(s) 767, 1420
BssT1I CCWWGG 1 cut(s) 1240
Bst1107I GTATAC 1 cut(s) 183
Bst6I CTCTTC 1 cut(s) 839
BstACI GRCGYC 2 cut(s) 767, 1420
BstBAI YACGTR 1 cut(s) 1636
BstC8I GCNNGC 1 cut(s) 620
BstDEI CTNAG 3 cut(s) 77, 208, 1272
BstDSI CCRYGG 1 cut(s) 1240
BstENI CCTNNNNNAGG 1 cut(s) 1271
BstF5I GGATG 6 cut(s) 27, 71, 1188, 1282, 1398, 1477
BstKTI GATC 5 cut(s) 267, 787, 1068, 1717, 2035
BstMAI GTCTC 2 cut(s) 33, 1042
BstMBI GATC 5 cut(s) 264, 784, 1065, 1714, 2032
BstMWI GCNNNNNNNGC 5 cut(s) 164, 608, 688, 1444, 1948
BstNSI RCATGY 3 cut(s) 750, 1006, 1430
BstSCI CCNGG 2 cut(s) 942, 1857
BstSFI CTRYAG 1 cut(s) 689
BstSLI GKGCMC 1 cut(s) 893
BstV1I GCAGC 5 cut(s) 575, 703, 1078, 1584, 1627
BstV2I GAAGAC 2 cut(s) 348, 933
BstXI CCANNNNNNTGG 1 cut(s) 1102
BstZ17I GTATAC 1 cut(s) 183
BsuI GTATCC 1 cut(s) 264
BsuRI GGCC 5 cut(s) 74, 891, 1239, 1438, 1681
BtgI CCRYGG 1 cut(s) 1240
BtrI CACGTC 2 cut(s) 314, 346
BtsCI GGATG 6 cut(s) 27, 71, 1188, 1282, 1398, 1477
BtsI GCAGTG 1 cut(s) 233
BtsIMutI CAGTG 3 cut(s) 233, 340, 1909
Cac8I GCNNGC 1 cut(s) 620
CaiI CAGNNNCTG 1 cut(s) 1671
CciI TCATGA 3 cut(s) 202, 1711, 2125
Cfr10I RCCGGY 1 cut(s) 618
Cfr13I GGNCC 5 cut(s) 73, 383, 889, 890, 1436
CseI GACGC 1 cut(s) 775
Csp6I GTAC 5 cut(s) 937, 1012, 1058, 1675, 1885
CviQI GTAC 5 cut(s) 937, 1012, 1058, 1675, 1885
DdeI CTNAG 3 cut(s) 77, 208, 1272
DpnI GATC 5 cut(s) 266, 786, 1067, 1716, 2034
DpnII GATC 5 cut(s) 264, 784, 1065, 1714, 2032
DrdI GACNNNNNNGTC 1 cut(s) 822
DseDI GACNNNNNNGTC 1 cut(s) 822
EaeI YGGCCR 2 cut(s) 1237, 1679
Eam1104I CTCTTC 1 cut(s) 839
EarI CTCTTC 1 cut(s) 839
EciI GGCGGA 1 cut(s) 1946
Eco130I CCWWGG 1 cut(s) 1240
Eco24I GRGCYC 1 cut(s) 893
Eco31I GGTCTC 1 cut(s) 33
Eco47I GGWCC 1 cut(s) 383
Eco57I CTGAAG 1 cut(s) 929
Eco88I CYCGRG 1 cut(s) 1575
EcoNI CCTNNNNNAGG 1 cut(s) 1271
EcoO109I RGGNCCY 2 cut(s) 889, 1436
EcoT14I CCWWGG 1 cut(s) 1240
EcoT22I ATGCAT 1 cut(s) 1235
EcoT38I GRGCYC 1 cut(s) 893
ErhI CCWWGG 1 cut(s) 1240
FaqI GGGAC 4 cut(s) 1003, 1431, 1799, 2017
FauNDI CATATG 3 cut(s) 55, 490, 1960
FblI GTMKAC 5 cut(s) 182, 246, 531, 1423, 1755
Fnu4HI GCNGC 5 cut(s) 564, 692, 1092, 1598, 1641
FokI GGATG 6 cut(s) 34, 78, 1195, 1289, 1405, 1484
FriOI GRGCYC 1 cut(s) 893
Fsp4HI GCNGC 5 cut(s) 564, 692, 1092, 1598, 1641
FspBI CTAG 3 cut(s) 441, 788, 897
GluI GCNGC 5 cut(s) 564, 692, 1092, 1598, 1641
HaeIII GGCC 5 cut(s) 74, 891, 1239, 1438, 1681
HapII CCGG 3 cut(s) 619, 943, 1858
HgaI GACGC 1 cut(s) 775
Hin1I GRCGYC 2 cut(s) 767, 1420
HincII GTYRAC 6 cut(s) 247, 438, 793, 949, 1330, 1756
HindII GTYRAC 6 cut(s) 247, 438, 793, 949, 1330, 1756
HinfI GANTC 4 cut(s) 960, 1099, 1379, 1830
HpaII CCGG 3 cut(s) 619, 943, 1858
HphI GGTGA 8 cut(s) 56, 172, 368, 625, 751, 1085, 1301, 1774
Hpy188I TCNGA 8 cut(s) 39, 112, 399, 812, 885, 1465, 1519, 2032
Hpy188III TCNNGA 6 cut(s) 203, 262, 268, 1617, 1712, 2126
Hpy99I CGWCG 1 cut(s) 410
HpyAV CCTTC 3 cut(s) 553, 880, 1211
HpyF10VI GCNNNNNNNGC 5 cut(s) 164, 608, 688, 1444, 1948
HpyF3I CTNAG 3 cut(s) 77, 208, 1272
Hsp92I GRCGYC 2 cut(s) 767, 1420
KroI GCCGGC 1 cut(s) 618
KroNI GCCGGC 1 cut(s) 620
Kzo9I GATC 5 cut(s) 264, 784, 1065, 1714, 2032
LguI GCTCTTC 1 cut(s) 839
Lsp1109I GCAGC 5 cut(s) 575, 703, 1078, 1584, 1627
LweI GCATC 3 cut(s) 247, 1042, 1242
MaeI CTAG 3 cut(s) 441, 788, 897
MalI GATC 5 cut(s) 266, 786, 1067, 1716, 2034
MboI GATC 5 cut(s) 264, 784, 1065, 1714, 2032
MboII GAAGA 8 cut(s) 19, 353, 604, 856, 871, 938, 1489, 1830
MhlI GDGCHC 1 cut(s) 893
MlsI TGGCCA 1 cut(s) 1681
MluNI TGGCCA 1 cut(s) 1681
MlyI GAGTC 3 cut(s) 969, 1093, 1388
MmeI TCCRAC 3 cut(s) 168, 790, 851
Mox20I TGGCCA 1 cut(s) 1681
Mph1103I ATGCAT 1 cut(s) 1235
MroNI GCCGGC 1 cut(s) 618
MscI TGGCCA 1 cut(s) 1681
MseI TTAA 7 cut(s) 138, 588, 755, 801, 903, 1299, 1692
MslI CAYNNNNRTG 1 cut(s) 1128
Msp20I TGGCCA 1 cut(s) 1681
MspI CCGG 3 cut(s) 619, 943, 1858
MspR9I CCNGG 2 cut(s) 944, 1859
MwoI GCNNNNNNNGC 5 cut(s) 164, 608, 688, 1444, 1948
NaeI GCCGGC 1 cut(s) 620
NciI CCSGG 2 cut(s) 944, 1859
NcoI CCATGG 1 cut(s) 1240
NdeI CATATG 3 cut(s) 55, 490, 1960
NdeII GATC 5 cut(s) 264, 784, 1065, 1714, 2032
NgoMIV GCCGGC 1 cut(s) 618
NlaIV GGNNCC 3 cut(s) 891, 1084, 1437
NmuCI GTSAC 5 cut(s) 356, 667, 1207, 1282, 1289
NsiI ATGCAT 1 cut(s) 1235
NspI RCATGY 3 cut(s) 750, 1006, 1430
PagI TCATGA 3 cut(s) 202, 1711, 2125
PciI ACATGT 3 cut(s) 746, 1002, 1426
PciSI GCTCTTC 1 cut(s) 839
PdiI GCCGGC 1 cut(s) 620
PfeI GAWTC 1 cut(s) 1830
PflFI GACNNNGTC 1 cut(s) 959
PkrI GCNGC 5 cut(s) 565, 693, 1093, 1599, 1642
PleI GAGTC 3 cut(s) 968, 1093, 1387
PpsI GAGTC 3 cut(s) 968, 1093, 1387
Ppu21I YACGTR 1 cut(s) 1636
PscI ACATGT 3 cut(s) 746, 1002, 1426
PsiI TTATAA 1 cut(s) 1443
PspN4I GGNNCC 3 cut(s) 891, 1084, 1437
PspOMI GGGCCC 1 cut(s) 889
PspPI GGNCC 5 cut(s) 73, 383, 889, 890, 1436
PstI CTGCAG 1 cut(s) 693
PstNI CAGNNNCTG 1 cut(s) 1671
PsyI GACNNNGTC 1 cut(s) 959
RsaI GTAC 5 cut(s) 938, 1013, 1059, 1676, 1886
RsaNI GTAC 5 cut(s) 937, 1012, 1058, 1675, 1885
RseI CAYNNNNRTG 1 cut(s) 1128
SalI GTCGAC 2 cut(s) 245, 1754
SapI GCTCTTC 1 cut(s) 839
SaqAI TTAA 7 cut(s) 138, 588, 755, 801, 903, 1299, 1692
SatI GCNGC 5 cut(s) 564, 692, 1092, 1598, 1641
Sau3AI GATC 5 cut(s) 264, 784, 1065, 1714, 2032
Sau96I GGNCC 5 cut(s) 73, 383, 889, 890, 1436
SchI GAGTC 3 cut(s) 969, 1093, 1388
ScrFI CCNGG 2 cut(s) 944, 1859
SduI GDGCHC 1 cut(s) 893
SfaNI GCATC 3 cut(s) 247, 1042, 1242
SfcI CTRYAG 1 cut(s) 689
SinI GGWCC 1 cut(s) 383
SmiMI CAYNNNNRTG 1 cut(s) 1128
SsiI CCGC 8 cut(s) 158, 167, 611, 1254, 1325, 1486, 1775, 1931
SspI AATATT 1 cut(s) 421
SspMI CTAG 3 cut(s) 441, 788, 897
StyD4I CCNGG 2 cut(s) 942, 1857
StyI CCWWGG 1 cut(s) 1240
TaqI TCGA 4 cut(s) 228, 246, 1725, 1755
TatI WGTACW 2 cut(s) 1057, 1884
TfiI GAWTC 1 cut(s) 1830
Tru1I TTAA 7 cut(s) 138, 588, 755, 801, 903, 1299, 1692
Tru9I TTAA 7 cut(s) 138, 588, 755, 801, 903, 1299, 1692
TscAI CASTG 3 cut(s) 240, 340, 1909
TseFI GTSAC 5 cut(s) 356, 667, 1207, 1282, 1289
TseI GCWGC 5 cut(s) 563, 691, 1091, 1597, 1640
Tsp45I GTSAC 5 cut(s) 356, 667, 1207, 1282, 1289
TspDTI ATGAA 9 cut(s) 354, 469, 497, 594, 998, 1325, 1523, 1690, 1700
TspGWI ACGGA 2 cut(s) 396, 1842
TspRI CASTG 3 cut(s) 240, 340, 1909
Tth111I GACNNNGTC 1 cut(s) 959
VpaK11BI GGWCC 1 cut(s) 383
XagI CCTNNNNNAGG 1 cut(s) 1271
XapI RAATTY 2 cut(s) 305, 1920
XceI RCATGY 3 cut(s) 750, 1006, 1430
XmiI GTMKAC 5 cut(s) 182, 246, 531, 1423, 1755
XspI CTAG 3 cut(s) 441, 788, 897
ZraI GACGTC 1 cut(s) 1421
Zsp2I ATGCAT 1 cut(s) 1235
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.