Rh4AG249000

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4A
OG0000124
Physical Location & Seq
Forward (+)
56174584 .. 56175624
1041 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4AG249000.1

Sequence Viewer

Length: 1041 bp
ATGGTGCACAACATTGACCTCTCAAACCACACCGTGTCCATTCACGGTCACAACTTTCCCGTCAATGCCTTGGAGTTCAGCCGTATAATGGGAGTGCTTGACGGGGGTGCAGAGATCGAGCTGCGGGCTACCACAGACGCGGGAGAATACGGTGTGTTTGTGCAGGACTTGTGCGACGGAGAAGGTCGGATACAGGTCTATCTGTTGAAGGAGATTGTCATTAACCGGGCTGATGTGGACGACACGTTCCGTATTGCATTTACAATGCTTGCAATGGCTCTCGTGCTCTGCCCAGGCACGGGAGAGGACGTCGATCCGTCCTTCGTACTCCCGCTTCTGGACACGGGGAAGATTAGGAACAAAAATTGGGCTTCATTCTGTGTGAAAACATTACTGGAAGCTGTGACTGCTCAGCGGGAATCTGGTGACGGTGTAATTGGTGGGCGCGTTCTGTTTCTGCAGACCCTTTATTTTGATAAGGTTGGGGATTCCATGTTTCACATGGATAGGTCTGTCCTGCCAGTCACAGGGTGGGGTGACTTTGAGGTGAGGGAGCTCATTAGCAGGATCAGGTGCCTTGGAGGCTTCAAGAGCCCAATTGTTTTGATGGAAAGGAGTAAGCGTTCGAAGATGGCAACAAAGTGCGATGTGGATGACGGTGAGTTTGGGCTTGGACTGGGGAAGGGGGTTCATGAGGACATTTTTGACATCAAGCTGGACATGATGGGTGTTAAGGGTGACATCAGCAGGCTTACTGGGATTGTCGGAAGGCTGCAGCCGGACATGGCCGAGCTGACAGGGAAAGTGGACATCATAGCACGGGAGTTACGTAGCTGGAAGAAAGAAGCTGCACAGATGGTGAGGCATGAGACGCGCCAAGTACTGTCCGAAAGATGGGACACTTGCAACCTTCGATATGTCCCAGTGTGGACGCCGCCGCGGAACGCCGTTAGGAAAAATGGGAAGTCCGTGTGGGATGCTGCAATACAGGTGGAGGAGAACATGGGCACGCGAACAATGAATGCCAAGCAAGTAATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
HMG_box

Protein Analysis

346

Amino Acids

38.62

Weight (kDa)

5.88

Isoelectric Point (pI)

31.84

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000124)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g10992 FvH4_2g25150 FvH4_2g27910 FvH4_2g27931 FvH4_4g09443 FvH4_4g09490 FvH4_4g15990 FvH4_4g15991 FvH4_6g07180 FvH4_6g40320 FvH4_7g10222 FvH4_7g10251
rosa_chinensis RchiOBHm_Chr2g0155611
rosa_laevigata RLG00000009253 RLG00000009254 RLG00000011848 RLG00000017301 RLG00000017302 RLG00000034909
rosa_multiflora Rmu_co8063658.1_g000001 Rmu_co8240443.1_g000001 Rmu_co8264451.1_g000001 Rmu_co8381937.1_g000001 Rmu_co8419903.1_g000001 Rmu_co8513405.1_g000002 Rmu_co8522915.1_g000001 Rmu_co8522915.1_g000004 Rmu_sc0000279.1_g000024 Rmu_sc0000279.1_g000048 Rmu_sc0000642.1_g000017 Rmu_sc0002045.1_g000015 Rmu_sc0002045.1_g000018 Rmu_sc0002045.1_g000023 Rmu_sc0002045.1_g000028 Rmu_sc0003047.1_g000008 Rmu_sc0003179.1_g000019 Rmu_sc0003179.1_g000020 Rmu_sc0003179.1_g000022 Rmu_sc0003179.1_g000023 Rmu_sc0003422.1_g000011 Rmu_sc0004999.1_g000014 Rmu_sc0005712.1_g000018 Rmu_sc0005712.1_g000023 Rmu_sc0006198.1_g000019 Rmu_sc0006373.1_g000005 Rmu_sc0006514.1_g000028 Rmu_sc0006514.1_g000031 Rmu_sc0007367.1_g000010 Rmu_sc0011475.1_g000002 Rmu_sc0025304.1_g000001 Rmu_ssc0000161.1_g000030 Rmu_ssc0000161.1_g000032 Rmu_ssc0000387.1_g000018
rosa_roxburghii Rroxscaffold_1G00031090 Rroxscaffold_1G00032770 Rroxscaffold_1G00068950 Rroxscaffold_1G00069000 Rroxscaffold_1G00069010 Rroxscaffold_2G00129060 Rroxscaffold_2G00129100 Rroxscaffold_4G00309310 Rroxscaffold_4G00309320 Rroxscaffold_5G00350620 Rroxscaffold_5G00350630 Rroxscaffold_7G00162650 Rroxscaffold_7G00162660 Rroxscaffold_7G00162710
rosa_rugosa Rorug02G0564700 Rorug02G0564700 Rorug03G0343100 Rorug04G0189700 Rorug05G0102800 Rorug05G0102900 Rorug05G0103000 Rorug05G0106500 Rorug05G0106600 Rorug05G0106700 Rorug05G0252800 Rorug07G0182100 Rorug07G0283500 Rorug07G0283600
rosa_samantha Rh1AG004000 Rh1AG004100 Rh1AG004200 Rh1AG004400 Rh1AG004500 Rh1AG004600 Rh1AG004800 Rh1AG004900 Rh1AG005300 Rh1AG007000 Rh1AG115000 Rh1CG049400 Rh1CG055400 Rh1CG111000 Rh1DG053600 Rh1DG053700 Rh1DG059300 Rh1DG119700 Rh1DG177100 Rh1DG177200 Rh2AG353800 Rh2AG354000 Rh2AG354100 Rh2AG354300 Rh2AG354400 Rh2AG354500 Rh2AG354600 Rh2AG354700 Rh2AG642300 Rh2AG642400 Rh2AG642500 Rh2BG336500 Rh2BG336600 Rh2BG336700 Rh2BG336800 Rh2BG336900 Rh2CG299900 Rh2CG300000 Rh2CG300100 Rh2DG337000 Rh2DG337100 Rh3AG246600 Rh3BG121900 Rh3BG122300 Rh3BG122600 Rh3BG122700 Rh3DG304800 Rh3DG304900 Rh4AG148800 Rh4AG249000 Rh4AG249100 Rh4AG249200 Rh4BG182700 Rh4BG182800 Rh4BG182900 Rh4BG254400 Rh4BG254500 Rh4BG254600 Rh4CG155500 Rh4CG155700 Rh4DG057900 Rh4DG058000 Rh4DG058100 Rh4DG058200 Rh4DG129100 Rh5AG364500 Rh5AG364600 Rh5AG364800 Rh5AG365300 Rh5CG363700 Rh5CG497600 Rh5DG239500 Rh5DG239600 Rh6AG173500 Rh6AG175400 Rh6BG075900 Rh6BG076300 Rh6BG076400 Rh6BG076500 Rh6BG076600 Rh6CG151000 Rh6CG151200 Rh6CG151300 Rh6CG151400 Rh6CG205200 Rh6CG205300 Rh6CG419700 Rh6CG419900 Rh6CG420100 Rh6DG498700 Rh6DG498800 Rh7AG329000 Rh7AG329100 Rh7AG329300 Rh7AG329400 Rh7AG353000 Rh7AG353100 Rh7AG353300 Rh7AG353400 Rh7AG353500 Rh7CG346400 Rh7CG346500 Rh7CG346700 Rh7CG370800 Rh7CG370900 Rh7CG371000 Rh7CG371100 Rh7DG325000 Rh7DG325100 Rh7DG325200 Rh7DG325300 Rh7DG353100 Rh7DG353200 Rh7DG353300 Rh7DG363500 Rh7DG364000
rosa_wichuraiana Rw0G002290 Rw0G012780 Rw1G000260 Rw1G000270 Rw1G010400 Rw1G010410 Rw1G010420 Rw1G010430 Rw1G010440 Rw2G003210 Rw2G003220 Rw4G010970 Rw5G048520 Rw6G013320 Rw6G013470 Rw6G014940 Rw6G016570 Rw6G016590 Rw6G016600 Rw6G016610 Rw6G016620 Rw6G035450 Rw7G027760 Rw7G030460

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 312
AccB1I GGYRCC 1 cut(s) 573
AccII CGCG 5 cut(s) 140, 447, 874, 940, 1012
AciI CCGC 7 cut(s) 124, 140, 332, 415, 935, 938, 940
AclWI GGATC 2 cut(s) 308, 575
AcoI YGGCCR 1 cut(s) 786
AcyI GRCGYC 2 cut(s) 309, 932
AdeI CACNNNGTG 2 cut(s) 34, 531
AfaI GTAC 2 cut(s) 327, 882
AfiI CCNNNNNNNGG 6 cut(s) 88, 298, 299, 337, 527, 894
AflIII ACRYGT 1 cut(s) 243
AgsI TTSAA 2 cut(s) 208, 589
AjnI CCWGG 1 cut(s) 292
AloI GAACNNNNNNTCC 4 cut(s) 230, 262, 607, 639
AluBI AGCT 7 cut(s) 121, 401, 556, 715, 793, 834, 848
AluI AGCT 7 cut(s) 121, 401, 556, 715, 793, 834, 848
Alw21I GWGCWC 3 cut(s) 9, 288, 558
Alw26I GTCTC 1 cut(s) 863
Alw44I GTGCAC 1 cut(s) 5
AlwI GGATC 2 cut(s) 308, 575
AoxI GGCC 1 cut(s) 786
ApaLI GTGCAC 1 cut(s) 5
ApeKI GCWGC 5 cut(s) 121, 772, 775, 848, 980
ArsI GACNNNNNNTTYG 2 cut(s) 647, 679
AspLEI GCGC 2 cut(s) 447, 876
AsuC2I CCSGG 1 cut(s) 227
AsuHPI GGTGA 6 cut(s) 437, 548, 559, 671, 749, 871
AsuII TTCGAA 1 cut(s) 626
BaeGI GKGCMC 2 cut(s) 9, 1010
BanI GGYRCC 1 cut(s) 573
BanII GRGCYC 2 cut(s) 558, 596
BarI GAAGNNNNNNTAC 4 cut(s) 174, 206, 318, 350
BauI CACGAG 1 cut(s) 281
Bbv12I GWGCWC 3 cut(s) 9, 288, 558
BbvI GCAGC 5 cut(s) 108, 759, 787, 835, 967
BccI CCATC 5 cut(s) 601, 625, 718, 850, 888
BceAI ACGGC 2 cut(s) 66, 932
BciT130I CCWGG 1 cut(s) 294
BciVI GTATCC 1 cut(s) 183
BcnI CCSGG 1 cut(s) 227
BcoDI GTCTC 1 cut(s) 863
BfmI CTRYAG 2 cut(s) 458, 773
BfuI GTATCC 1 cut(s) 183
BglI GCCNNNNNGGC 1 cut(s) 582
BisI GCNGC 7 cut(s) 122, 773, 776, 849, 935, 938, 981
BlpI GCTNAGC 1 cut(s) 411
BlsI GCNGC 7 cut(s) 123, 774, 777, 850, 936, 939, 982
BmcAI AGTACT 1 cut(s) 882
Bme1390I CCNGG 2 cut(s) 227, 294
BmiI GGNNCC 1 cut(s) 575
BmrFI CCNGG 2 cut(s) 227, 294
BmrI ACTGGG 3 cut(s) 686, 765, 917
BmsI GCATC 1 cut(s) 967
BmuI ACTGGG 3 cut(s) 686, 765, 917
Bpu1102I GCTNAGC 1 cut(s) 411
Bpu14I TTCGAA 1 cut(s) 626
BpuMI CCSGG 1 cut(s) 227
BsaAI YACGTR 1 cut(s) 830
BsaHI GRCGYC 2 cut(s) 309, 932
BsaJI CCNNGG 4 cut(s) 69, 292, 577, 938
BsaXI ACNNNNNCTCC 4 cut(s) 294, 324, 607, 637
Bsc4I CCNNNNNNNGG 6 cut(s) 88, 298, 299, 337, 527, 894
Bse1I ACTGG 5 cut(s) 399, 521, 681, 760, 923
Bse3DI GCAATG 1 cut(s) 279
BseBI CCWGG 1 cut(s) 294
BseDI CCNNGG 4 cut(s) 69, 292, 577, 938
BseGI GGATG 2 cut(s) 658, 982
BseLI CCNNNNNNNGG 6 cut(s) 88, 298, 299, 337, 527, 894
BseMI GCAATG 1 cut(s) 279
BseMII CTCAG 1 cut(s) 425
BseNI ACTGG 5 cut(s) 399, 521, 681, 760, 923
BseRI GAGGAG 1 cut(s) 1010
BseSI GKGCMC 2 cut(s) 9, 1010
BseXI GCAGC 5 cut(s) 108, 759, 787, 835, 967
BsgI GTGCAG 3 cut(s) 129, 182, 834
Bsh1236I CGCG 5 cut(s) 140, 447, 874, 940, 1012
BshFI GGCC 1 cut(s) 788
BshNI GGYRCC 1 cut(s) 573
BsiHKAI GWGCWC 3 cut(s) 9, 288, 558
BsiSI CCGG 2 cut(s) 226, 779
BslFI GGGAC 2 cut(s) 905, 911
BslI CCNNNNNNNGG 6 cut(s) 88, 298, 299, 337, 527, 894
BsmAI GTCTC 1 cut(s) 863
BsmBI CGTCTC 1 cut(s) 863
BsmFI GGGAC 2 cut(s) 905, 911
BsmI GAATGC 1 cut(s) 1027
BsnI GGCC 1 cut(s) 788
Bsp119I TTCGAA 1 cut(s) 626
Bsp1286I GDGCHC 5 cut(s) 9, 288, 558, 596, 1010
Bsp143I GATC 3 cut(s) 114, 313, 567
Bsp1720I GCTNAGC 1 cut(s) 411
BspACI CCGC 7 cut(s) 124, 140, 332, 415, 935, 938, 940
BspANI GGCC 1 cut(s) 788
BspCNI CTCAG 1 cut(s) 424
BspFNI CGCG 5 cut(s) 140, 447, 874, 940, 1012
BspHI TCATGA 1 cut(s) 691
BspLI GGNNCC 1 cut(s) 575
BspMAI CTGCAG 2 cut(s) 462, 777
BspPI GGATC 2 cut(s) 308, 575
BspT104I TTCGAA 1 cut(s) 626
BspT107I GGYRCC 1 cut(s) 573
BsrDI GCAATG 1 cut(s) 279
BsrI ACTGG 5 cut(s) 399, 521, 681, 760, 923
BssECI CCNNGG 4 cut(s) 69, 292, 577, 938
BssMI GATC 3 cut(s) 114, 313, 567
BssNI GRCGYC 2 cut(s) 309, 932
BssSI CACGAG 1 cut(s) 281
BssT1I CCWWGG 2 cut(s) 69, 577
Bst2BI CACGAG 1 cut(s) 281
Bst2UI CCWGG 1 cut(s) 294
Bst4CI ACNGT 6 cut(s) 34, 47, 152, 431, 659, 885
BstACI GRCGYC 2 cut(s) 309, 932
BstBAI YACGTR 1 cut(s) 830
BstBI TTCGAA 1 cut(s) 626
BstC8I GCNNGC 4 cut(s) 126, 270, 749, 1010
BstDEI CTNAG 1 cut(s) 411
BstDSI CCRYGG 1 cut(s) 938
BstF5I GGATG 2 cut(s) 658, 982
BstFNI CGCG 5 cut(s) 140, 447, 874, 940, 1012
BstHHI GCGC 2 cut(s) 447, 876
BstKTI GATC 3 cut(s) 117, 316, 570
BstMAI GTCTC 1 cut(s) 863
BstMBI GATC 3 cut(s) 114, 313, 567
BstMWI GCNNNNNNNGC 4 cut(s) 407, 582, 591, 871
BstNI CCWGG 1 cut(s) 294
BstSCI CCNGG 2 cut(s) 225, 292
BstSFI CTRYAG 2 cut(s) 458, 773
BstSLI GKGCMC 2 cut(s) 9, 1010
BstSNI TACGTA 1 cut(s) 830
BstUI CGCG 5 cut(s) 140, 447, 874, 940, 1012
BstV1I GCAGC 5 cut(s) 108, 759, 787, 835, 967
BsuI GTATCC 1 cut(s) 183
BsuRI GGCC 1 cut(s) 788
BtgI CCRYGG 1 cut(s) 938
BtgZI GCGATG 1 cut(s) 660
BtsCI GGATG 2 cut(s) 658, 982
BtsIMutI CAGTG 1 cut(s) 930
Cac8I GCNNGC 4 cut(s) 126, 270, 749, 1010
CciI TCATGA 1 cut(s) 691
CfoI GCGC 2 cut(s) 447, 876
Cfr42I CCGCGG 1 cut(s) 941
CseI GACGC 3 cut(s) 146, 880, 940
Csp6I GTAC 2 cut(s) 326, 881
CspCI CAANNNNNGTGG 2 cut(s) 972, 1007
CviAII CATG 7 cut(s) 493, 502, 692, 721, 784, 866, 1003
CviQI GTAC 2 cut(s) 326, 881
DdeI CTNAG 1 cut(s) 411
DpnI GATC 3 cut(s) 116, 315, 569
DpnII GATC 3 cut(s) 114, 313, 567
DraIII CACNNNGTG 2 cut(s) 34, 531
EaeI YGGCCR 1 cut(s) 786
Ecl136II GAGCTC 1 cut(s) 556
Eco105I TACGTA 1 cut(s) 830
Eco130I CCWWGG 2 cut(s) 69, 577
Eco24I GRGCYC 2 cut(s) 558, 596
Eco53kI GAGCTC 1 cut(s) 556
EcoICRI GAGCTC 1 cut(s) 556
EcoRII CCWGG 1 cut(s) 292
EcoT14I CCWWGG 2 cut(s) 69, 577
EcoT38I GRGCYC 2 cut(s) 558, 596
ErhI CCWWGG 2 cut(s) 69, 577
Esp3I CGTCTC 1 cut(s) 863
FaeI CATG 7 cut(s) 496, 505, 695, 724, 787, 869, 1006
FaqI GGGAC 2 cut(s) 905, 911
FatI CATG 7 cut(s) 492, 501, 691, 720, 783, 865, 1002
FauI CCCGC 4 cut(s) 117, 133, 339, 408
Fnu4HI GCNGC 7 cut(s) 122, 773, 776, 849, 935, 938, 981
FokI GGATG 2 cut(s) 665, 989
FriOI GRGCYC 2 cut(s) 558, 596
Fsp4HI GCNGC 7 cut(s) 122, 773, 776, 849, 935, 938, 981
GlaI GCGC 2 cut(s) 446, 875
GluI GCNGC 7 cut(s) 122, 773, 776, 849, 935, 938, 981
HaeIII GGCC 1 cut(s) 788
HapII CCGG 2 cut(s) 226, 779
HgaI GACGC 3 cut(s) 146, 880, 940
HhaI GCGC 2 cut(s) 447, 876
Hin1I GRCGYC 2 cut(s) 309, 932
Hin1II CATG 7 cut(s) 496, 505, 695, 724, 787, 869, 1006
Hin6I GCGC 2 cut(s) 445, 874
HinP1I GCGC 2 cut(s) 445, 874
HinfI GANTC 2 cut(s) 419, 488
HpaII CCGG 2 cut(s) 226, 779
HphI GGTGA 6 cut(s) 437, 548, 559, 671, 749, 871
Hpy166II GTNNAC 4 cut(s) 7, 238, 808, 930
Hpy188I TCNGA 3 cut(s) 189, 767, 889
Hpy188III TCNNGA 3 cut(s) 338, 589, 692
Hpy8I GTNNAC 4 cut(s) 7, 238, 808, 930
Hpy99I CGWCG 2 cut(s) 179, 314
HpyAV CCTTC 6 cut(s) 176, 202, 331, 676, 762, 920
HpyCH4III ACNGT 6 cut(s) 34, 47, 152, 431, 659, 885
HpyCH4IV ACGT 3 cut(s) 245, 309, 829
HpyF10VI GCNNNNNNNGC 4 cut(s) 407, 582, 591, 871
HpyF3I CTNAG 1 cut(s) 411
HpySE526I ACGT 3 cut(s) 245, 309, 829
Hsp92I GRCGYC 2 cut(s) 309, 932
Hsp92II CATG 7 cut(s) 496, 505, 695, 724, 787, 869, 1006
HspAI GCGC 2 cut(s) 445, 874
KspI CCGCGG 1 cut(s) 941
Kzo9I GATC 3 cut(s) 114, 313, 567
LmnI GCTCC 1 cut(s) 553
Lsp1109I GCAGC 5 cut(s) 108, 759, 787, 835, 967
LweI GCATC 1 cut(s) 967
MaeII ACGT 3 cut(s) 245, 309, 829
MaeIII GTNAC 7 cut(s) 47, 403, 425, 523, 536, 737, 825
MalI GATC 3 cut(s) 116, 315, 569
MboI GATC 3 cut(s) 114, 313, 567
MboII GAAGA 3 cut(s) 361, 640, 850
MfeI CAATTG 1 cut(s) 597
MhlI GDGCHC 5 cut(s) 9, 288, 558, 596, 1010
MluCI AATT 3 cut(s) 364, 435, 597
MmeI TCCRAC 2 cut(s) 167, 745
MnlI CCTC 8 cut(s) 29, 298, 538, 543, 575, 688, 855, 988
MseI TTAA 2 cut(s) 222, 732
MspA1I CMGCKG 2 cut(s) 415, 940
MspI CCGG 2 cut(s) 226, 779
MspR9I CCNGG 2 cut(s) 227, 294
MunI CAATTG 1 cut(s) 597
Mva1269I GAATGC 1 cut(s) 1027
MvaI CCWGG 1 cut(s) 294
MvnI CGCG 5 cut(s) 140, 447, 874, 940, 1012
MwoI GCNNNNNNNGC 4 cut(s) 407, 582, 591, 871
NciI CCSGG 1 cut(s) 227
NdeII GATC 3 cut(s) 114, 313, 567
NlaIII CATG 7 cut(s) 496, 505, 695, 724, 787, 869, 1006
NlaIV GGNNCC 1 cut(s) 575
NmeAIII GCCGAG 1 cut(s) 814
NmuCI GTSAC 6 cut(s) 47, 403, 425, 523, 536, 737
NspV TTCGAA 1 cut(s) 626
PagI TCATGA 1 cut(s) 691
PcsI WCGNNNNNNNCGW 1 cut(s) 826
PctI GAATGC 1 cut(s) 1027
PfeI GAWTC 2 cut(s) 419, 488
PkrI GCNGC 7 cut(s) 123, 774, 777, 850, 936, 939, 982
Ppu21I YACGTR 1 cut(s) 830
Psp124BI GAGCTC 1 cut(s) 558
Psp6I CCWGG 1 cut(s) 292
PspGI CCWGG 1 cut(s) 292
PspN4I GGNNCC 1 cut(s) 575
PstI CTGCAG 2 cut(s) 462, 777
RsaI GTAC 2 cut(s) 327, 882
RsaNI GTAC 2 cut(s) 326, 881
SacI GAGCTC 1 cut(s) 558
SacII CCGCGG 1 cut(s) 941
SaqAI TTAA 2 cut(s) 222, 732
SatI GCNGC 7 cut(s) 122, 773, 776, 849, 935, 938, 981
Sau3AI GATC 3 cut(s) 114, 313, 567
ScaI AGTACT 1 cut(s) 882
ScrFI CCNGG 2 cut(s) 227, 294
SduI GDGCHC 5 cut(s) 9, 288, 558, 596, 1010
SfaNI GCATC 1 cut(s) 967
SfcI CTRYAG 2 cut(s) 458, 773
Sfr303I CCGCGG 1 cut(s) 941
SfuI TTCGAA 1 cut(s) 626
SgrBI CCGCGG 1 cut(s) 941
SnaBI TACGTA 1 cut(s) 830
Sse9I AATT 3 cut(s) 364, 435, 597
SsiI CCGC 7 cut(s) 124, 140, 332, 415, 935, 938, 940
SstI GAGCTC 1 cut(s) 558
StyD4I CCNGG 2 cut(s) 225, 292
StyI CCWWGG 2 cut(s) 69, 577
TaaI ACNGT 6 cut(s) 34, 47, 152, 431, 659, 885
TaiI ACGT 3 cut(s) 248, 312, 832
TaqI TCGA 4 cut(s) 117, 312, 626, 913
TasI AATT 3 cut(s) 364, 435, 597
TatI WGTACW 1 cut(s) 880
TauI GCSGC 2 cut(s) 937, 940
TfiI GAWTC 2 cut(s) 419, 488
Tru1I TTAA 2 cut(s) 222, 732
Tru9I TTAA 2 cut(s) 222, 732
TscAI CASTG 1 cut(s) 930
TseFI GTSAC 6 cut(s) 47, 403, 425, 523, 536, 737
TseI GCWGC 5 cut(s) 121, 772, 775, 848, 980
Tsp45I GTSAC 6 cut(s) 47, 403, 425, 523, 536, 737
TspDTI ATGAA 3 cut(s) 363, 680, 1034
TspGWI ACGGA 4 cut(s) 192, 239, 306, 958
TspRI CASTG 1 cut(s) 930
VneI GTGCAC 1 cut(s) 5
XcmI CCANNNNNNNNNTGG 2 cut(s) 499, 528
ZraI GACGTC 1 cut(s) 310
ZrmI AGTACT 1 cut(s) 882
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.