Rh2AG642400

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
OG0000124
Physical Location & Seq
Reverse (-)
86495176 .. 86497190
2015 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG642400.1

Sequence Viewer

Length: 1230 bp
ATGTCGGTCCACGACTGTGGGTGGGAATGTAAATGGAATGGGCCAGTCAAATCGGCCCGTGGATTGCTTCGTATGACGGTGATGCGCGGTCCATTCTTCGGGGGAGGTGGAAACAGCGAAGTATTGAAGAGATCGAGTCAACTGGTACCCGGAGATTTGTTCGTATTGAGCACCTGGGGTCTGTCCCCTGAAAAGGTGACTGCGATATCTGAACTGGGGCTTGCGAGTCTGCTGGATATTGGGTGCACTACCCAAGTCGGCCCTGTGTGGAGGTTGATGGTGCACAACATTGACCTCTCAAACCACACCGTGTCCATTCACGGTCACAACTTTCCCGTCAATGCCTTGGAGTTTAGCGGTATAATGGGAGTGCTTGACGGGGGTGCAGAGATCGAGCTGGGGGCTACCACAAACGCGAGAGAATACAGTGTGTTTGTGCAGGACTTGTGCGACAGAGAAGGTCGGATACAGGTCTATCTGATGAAGGAGATTGTCATTAACCGGGGTGATGTGGACGACACGTTTCGTATTGCATTTACAATGCTTGCAATTGCTCTCGTGCTTTGCCCAGGCACGGGAGAGGACGTCGATCCGTCCTTCGTACTCCAGCTTCTGGACACGGGGAAGATTAGGAACAAAAATTGGGCTTCATTCTGTGTGAAAACATTACTGGAAGCTGTGACTGCTCAGCGGGGATCTGGTGACGGTGTAATTGGTGGGTGCGTTCTGTTTCTGCAGACCCTTTATTTTGATAAGGGTGGGGTGACAGGGTGGGGTGACTTTGAGGTGAGGGAGCTGATTAGCAGGATCAGGTGCCTTGGAGGCTTCAAGAGCCCAATTGTTTTGATGGAAAGGAGTAAGCGTTCGAAGATGGCAACAAAGTGCAATGTGGATGACGGTGAGTTTGGGCTTGGACTGAGGAAGGGGGTTCATGAGGACATTTTTGATATCAAGCTAGACATGATGGGTGTTAAGGGTGACATCAGCAGGCTTAATGGGATTGTCGGAAGGCTGCAGCTAGACATGGCCGACCTGATAGGGAAAGTGGACATCATAGCACGGGAGTTACGTAGCAGGAAGAAAGAAGCTGCACAGATGGTGAGGCATGAGACGCGGCAAGTACTGTCCGAAAGATGGGACACTTGCAACCTTCGATCTGTCCCGGTGTGGACGCCGCCGCGGAACGATGTTAGGCAAAATGGGAAGTCCGTGCGGGATGCTGCAATATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
HMG_box

Protein Analysis

409

Amino Acids

45.04

Weight (kDa)

7.55

Isoelectric Point (pI)

34.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000124)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g10992 FvH4_2g25150 FvH4_2g27910 FvH4_2g27931 FvH4_4g09443 FvH4_4g09490 FvH4_4g15990 FvH4_4g15991 FvH4_6g07180 FvH4_6g40320 FvH4_7g10222 FvH4_7g10251
rosa_chinensis RchiOBHm_Chr2g0155611
rosa_laevigata RLG00000009253 RLG00000009254 RLG00000011848 RLG00000017301 RLG00000017302 RLG00000034909
rosa_multiflora Rmu_co8063658.1_g000001 Rmu_co8240443.1_g000001 Rmu_co8264451.1_g000001 Rmu_co8381937.1_g000001 Rmu_co8419903.1_g000001 Rmu_co8513405.1_g000002 Rmu_co8522915.1_g000001 Rmu_co8522915.1_g000004 Rmu_sc0000279.1_g000024 Rmu_sc0000279.1_g000048 Rmu_sc0000642.1_g000017 Rmu_sc0002045.1_g000015 Rmu_sc0002045.1_g000018 Rmu_sc0002045.1_g000023 Rmu_sc0002045.1_g000028 Rmu_sc0003047.1_g000008 Rmu_sc0003179.1_g000019 Rmu_sc0003179.1_g000020 Rmu_sc0003179.1_g000022 Rmu_sc0003179.1_g000023 Rmu_sc0003422.1_g000011 Rmu_sc0004999.1_g000014 Rmu_sc0005712.1_g000018 Rmu_sc0005712.1_g000023 Rmu_sc0006198.1_g000019 Rmu_sc0006373.1_g000005 Rmu_sc0006514.1_g000028 Rmu_sc0006514.1_g000031 Rmu_sc0007367.1_g000010 Rmu_sc0011475.1_g000002 Rmu_sc0025304.1_g000001 Rmu_ssc0000161.1_g000030 Rmu_ssc0000161.1_g000032 Rmu_ssc0000387.1_g000018
rosa_roxburghii Rroxscaffold_1G00031090 Rroxscaffold_1G00032770 Rroxscaffold_1G00068950 Rroxscaffold_1G00069000 Rroxscaffold_1G00069010 Rroxscaffold_2G00129060 Rroxscaffold_2G00129100 Rroxscaffold_4G00309310 Rroxscaffold_4G00309320 Rroxscaffold_5G00350620 Rroxscaffold_5G00350630 Rroxscaffold_7G00162650 Rroxscaffold_7G00162660 Rroxscaffold_7G00162710
rosa_rugosa Rorug02G0564700 Rorug02G0564700 Rorug03G0343100 Rorug04G0189700 Rorug05G0102800 Rorug05G0102900 Rorug05G0103000 Rorug05G0106500 Rorug05G0106600 Rorug05G0106700 Rorug05G0252800 Rorug07G0182100 Rorug07G0283500 Rorug07G0283600
rosa_samantha Rh1AG004000 Rh1AG004100 Rh1AG004200 Rh1AG004400 Rh1AG004500 Rh1AG004600 Rh1AG004800 Rh1AG004900 Rh1AG005300 Rh1AG007000 Rh1AG115000 Rh1CG049400 Rh1CG055400 Rh1CG111000 Rh1DG053600 Rh1DG053700 Rh1DG059300 Rh1DG119700 Rh1DG177100 Rh1DG177200 Rh2AG353800 Rh2AG354000 Rh2AG354100 Rh2AG354300 Rh2AG354400 Rh2AG354500 Rh2AG354600 Rh2AG354700 Rh2AG642300 Rh2AG642400 Rh2AG642500 Rh2BG336500 Rh2BG336600 Rh2BG336700 Rh2BG336800 Rh2BG336900 Rh2CG299900 Rh2CG300000 Rh2CG300100 Rh2DG337000 Rh2DG337100 Rh3AG246600 Rh3BG121900 Rh3BG122300 Rh3BG122600 Rh3BG122700 Rh3DG304800 Rh3DG304900 Rh4AG148800 Rh4AG249000 Rh4AG249100 Rh4AG249200 Rh4BG182700 Rh4BG182800 Rh4BG182900 Rh4BG254400 Rh4BG254500 Rh4BG254600 Rh4CG155500 Rh4CG155700 Rh4DG057900 Rh4DG058000 Rh4DG058100 Rh4DG058200 Rh4DG129100 Rh5AG364500 Rh5AG364600 Rh5AG364800 Rh5AG365300 Rh5CG363700 Rh5CG497600 Rh5DG239500 Rh5DG239600 Rh6AG173500 Rh6AG175400 Rh6BG075900 Rh6BG076300 Rh6BG076400 Rh6BG076500 Rh6BG076600 Rh6CG151000 Rh6CG151200 Rh6CG151300 Rh6CG151400 Rh6CG205200 Rh6CG205300 Rh6CG419700 Rh6CG419900 Rh6CG420100 Rh6DG498700 Rh6DG498800 Rh7AG329000 Rh7AG329100 Rh7AG329300 Rh7AG329400 Rh7AG353000 Rh7AG353100 Rh7AG353300 Rh7AG353400 Rh7AG353500 Rh7CG346400 Rh7CG346500 Rh7CG346700 Rh7CG370800 Rh7CG370900 Rh7CG371000 Rh7CG371100 Rh7DG325000 Rh7DG325100 Rh7DG325200 Rh7DG325300 Rh7DG353100 Rh7DG353200 Rh7DG353300 Rh7DG363500 Rh7DG364000
rosa_wichuraiana Rw0G002290 Rw0G012780 Rw1G000260 Rw1G000270 Rw1G010400 Rw1G010410 Rw1G010420 Rw1G010430 Rw1G010440 Rw2G003210 Rw2G003220 Rw4G010970 Rw5G048520 Rw6G013320 Rw6G013470 Rw6G014940 Rw6G016570 Rw6G016590 Rw6G016600 Rw6G016610 Rw6G016620 Rw6G035450 Rw7G027760 Rw7G030460

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 588
Acc65I GGTACC 1 cut(s) 145
AccB1I GGYRCC 2 cut(s) 145, 813
AccB7I CCANNNNNTGG 1 cut(s) 613
AccII CGCG 4 cut(s) 87, 416, 1114, 1180
AciI CCGC 8 cut(s) 87, 357, 691, 1114, 1175, 1178, 1180, 1213
AclWI GGATC 3 cut(s) 584, 703, 815
AcoI YGGCCR 1 cut(s) 1026
AcyI GRCGYC 2 cut(s) 585, 1172
AdeI CACNNNGTG 1 cut(s) 310
AfaI GTAC 3 cut(s) 147, 603, 1122
AfiI CCNNNNNNNGG 6 cut(s) 98, 193, 574, 575, 613, 1134
AflIII ACRYGT 1 cut(s) 519
AgsI TTSAA 2 cut(s) 127, 829
AjnI CCWGG 2 cut(s) 173, 568
AleI CACNNNNGTG 1 cut(s) 15
AloI GAACNNNNNNTCC 2 cut(s) 847, 879
AluBI AGCT 7 cut(s) 397, 610, 677, 796, 955, 1018, 1088
AluI AGCT 7 cut(s) 397, 610, 677, 796, 955, 1018, 1088
Alw21I GWGCWC 3 cut(s) 173, 248, 285
Alw26I GTCTC 1 cut(s) 1103
Alw44I GTGCAC 2 cut(s) 244, 281
AlwI GGATC 3 cut(s) 584, 703, 815
AlwNI CAGNNNCTG 1 cut(s) 613
AoxI GGCC 4 cut(s) 41, 54, 259, 1026
ApaLI GTGCAC 2 cut(s) 244, 281
ApeKI GCWGC 4 cut(s) 1012, 1015, 1088, 1220
ArsI GACNNNNNNTTYG 2 cut(s) 887, 919
Asp718I GGTACC 1 cut(s) 145
AspLEI GCGC 1 cut(s) 87
AspS9I GGNCC 5 cut(s) 7, 41, 55, 89, 260
AsuC2I CCSGG 3 cut(s) 150, 503, 1163
AsuII TTCGAA 1 cut(s) 866
AvaII GGWCC 2 cut(s) 7, 89
BaeGI GKGCMC 2 cut(s) 248, 285
BanI GGYRCC 2 cut(s) 145, 813
BanII GRGCYC 1 cut(s) 836
BarI GAAGNNNNNNTAC 4 cut(s) 450, 482, 594, 626
BauI CACGAG 1 cut(s) 557
Bbv12I GWGCWC 3 cut(s) 173, 248, 285
BbvI GCAGC 4 cut(s) 999, 1027, 1075, 1207
BccI CCATC 6 cut(s) 271, 841, 865, 958, 1090, 1128
BciT130I CCWGG 2 cut(s) 175, 570
BciVI GTATCC 1 cut(s) 459
BcnI CCSGG 3 cut(s) 150, 503, 1163
BcoDI GTCTC 1 cut(s) 1103
BfaI CTAG 2 cut(s) 956, 1019
BfmI CTRYAG 2 cut(s) 734, 1013
BfuI GTATCC 1 cut(s) 459
BglI GCCNNNNNGGC 1 cut(s) 822
BisI GCNGC 7 cut(s) 1013, 1016, 1089, 1115, 1175, 1178, 1221
BlpI GCTNAGC 1 cut(s) 687
BlsI GCNGC 7 cut(s) 1014, 1017, 1090, 1116, 1176, 1179, 1222
BmcAI AGTACT 1 cut(s) 1122
Bme1390I CCNGG 5 cut(s) 150, 175, 503, 570, 1163
Bme18I GGWCC 2 cut(s) 7, 89
BmgT120I GGNCC 5 cut(s) 7, 41, 55, 89, 260
BmiI GGNNCC 2 cut(s) 147, 815
BmrFI CCNGG 5 cut(s) 150, 175, 503, 570, 1163
BmrI ACTGGG 1 cut(s) 224
BmsI GCATC 2 cut(s) 72, 1207
BmuI ACTGGG 1 cut(s) 224
BpmI CTGGAG 1 cut(s) 590
Bpu1102I GCTNAGC 1 cut(s) 687
Bpu14I TTCGAA 1 cut(s) 866
BpuMI CCSGG 3 cut(s) 150, 503, 1163
BsaAI YACGTR 1 cut(s) 1070
BsaHI GRCGYC 2 cut(s) 585, 1172
BsaJI CCNNGG 7 cut(s) 58, 174, 345, 502, 568, 817, 1178
BsaXI ACNNNNNCTCC 4 cut(s) 570, 600, 847, 877
Bsc4I CCNNNNNNNGG 6 cut(s) 98, 193, 574, 575, 613, 1134
Bse1I ACTGG 4 cut(s) 44, 147, 219, 675
Bse3DI GCAATG 1 cut(s) 892
BseBI CCWGG 2 cut(s) 175, 570
BseDI CCNNGG 7 cut(s) 58, 174, 345, 502, 568, 817, 1178
BseGI GGATG 2 cut(s) 898, 1222
BseLI CCNNNNNNNGG 6 cut(s) 98, 193, 574, 575, 613, 1134
BseMI GCAATG 1 cut(s) 892
BseMII CTCAG 2 cut(s) 701, 908
BseNI ACTGG 4 cut(s) 44, 147, 219, 675
BseSI GKGCMC 2 cut(s) 248, 285
BseXI GCAGC 4 cut(s) 999, 1027, 1075, 1207
BseYI CCCAGC 1 cut(s) 397
BsgI GTGCAG 3 cut(s) 405, 458, 1074
Bsh1236I CGCG 4 cut(s) 87, 416, 1114, 1180
BshFI GGCC 4 cut(s) 43, 56, 261, 1028
BshNI GGYRCC 2 cut(s) 145, 813
BsiHKAI GWGCWC 3 cut(s) 173, 248, 285
BsiSI CCGG 3 cut(s) 150, 502, 1163
BslFI GGGAC 3 cut(s) 169, 1145, 1151
BslI CCNNNNNNNGG 6 cut(s) 98, 193, 574, 575, 613, 1134
BsmAI GTCTC 1 cut(s) 1103
BsmBI CGTCTC 1 cut(s) 1103
BsmFI GGGAC 3 cut(s) 169, 1145, 1151
BsnI GGCC 4 cut(s) 43, 56, 261, 1028
Bsp119I TTCGAA 1 cut(s) 866
Bsp1286I GDGCHC 4 cut(s) 173, 248, 285, 836
Bsp143I GATC 6 cut(s) 131, 390, 589, 695, 807, 1154
Bsp1720I GCTNAGC 1 cut(s) 687
BspACI CCGC 8 cut(s) 87, 357, 691, 1114, 1175, 1178, 1180, 1213
BspANI GGCC 4 cut(s) 43, 56, 261, 1028
BspCNI CTCAG 2 cut(s) 700, 909
BspFNI CGCG 4 cut(s) 87, 416, 1114, 1180
BspHI TCATGA 1 cut(s) 931
BspLI GGNNCC 2 cut(s) 147, 815
BspMAI CTGCAG 2 cut(s) 738, 1017
BspPI GGATC 3 cut(s) 584, 703, 815
BspT104I TTCGAA 1 cut(s) 866
BspT107I GGYRCC 2 cut(s) 145, 813
BsrDI GCAATG 1 cut(s) 892
BsrI ACTGG 4 cut(s) 44, 147, 219, 675
BssECI CCNNGG 7 cut(s) 58, 174, 345, 502, 568, 817, 1178
BssMI GATC 6 cut(s) 131, 390, 589, 695, 807, 1154
BssNI GRCGYC 2 cut(s) 585, 1172
BssSI CACGAG 1 cut(s) 557
BssT1I CCWWGG 2 cut(s) 345, 817
Bst2BI CACGAG 1 cut(s) 557
Bst2UI CCWGG 2 cut(s) 175, 570
Bst4CI ACNGT 8 cut(s) 17, 79, 310, 323, 428, 707, 899, 1125
Bst6I CTCTTC 1 cut(s) 122
BstACI GRCGYC 2 cut(s) 585, 1172
BstBAI YACGTR 1 cut(s) 1070
BstBI TTCGAA 1 cut(s) 866
BstC8I GCNNGC 3 cut(s) 222, 546, 989
BstDEI CTNAG 2 cut(s) 687, 917
BstDSI CCRYGG 2 cut(s) 58, 1178
BstF5I GGATG 2 cut(s) 898, 1222
BstFNI CGCG 4 cut(s) 87, 416, 1114, 1180
BstHHI GCGC 1 cut(s) 87
BstKTI GATC 6 cut(s) 134, 393, 592, 698, 810, 1157
BstMAI GTCTC 1 cut(s) 1103
BstMBI GATC 6 cut(s) 131, 390, 589, 695, 807, 1154
BstMWI GCNNNNNNNGC 4 cut(s) 683, 822, 831, 1111
BstNI CCWGG 2 cut(s) 175, 570
BstSCI CCNGG 5 cut(s) 148, 173, 501, 568, 1161
BstSFI CTRYAG 2 cut(s) 734, 1013
BstSLI GKGCMC 2 cut(s) 248, 285
BstSNI TACGTA 1 cut(s) 1070
BstUI CGCG 4 cut(s) 87, 416, 1114, 1180
BstV1I GCAGC 4 cut(s) 999, 1027, 1075, 1207
BstX2I RGATCY 1 cut(s) 695
BstXI CCANNNNNNTGG 1 cut(s) 17
BstYI RGATCY 1 cut(s) 695
BsuI GTATCC 1 cut(s) 459
BsuRI GGCC 4 cut(s) 43, 56, 261, 1028
BtgI CCRYGG 2 cut(s) 58, 1178
BtsCI GGATG 2 cut(s) 898, 1222
BtsIMutI CAGTG 1 cut(s) 433
Cac8I GCNNGC 3 cut(s) 222, 546, 989
CaiI CAGNNNCTG 1 cut(s) 613
CciI TCATGA 1 cut(s) 931
CfoI GCGC 1 cut(s) 87
Cfr13I GGNCC 5 cut(s) 7, 41, 55, 89, 260
Cfr42I CCGCGG 1 cut(s) 1181
CseI GACGC 2 cut(s) 1120, 1180
Csp6I GTAC 3 cut(s) 146, 602, 1121
CviAII CATG 4 cut(s) 932, 961, 1024, 1106
CviQI GTAC 3 cut(s) 146, 602, 1121
DdeI CTNAG 2 cut(s) 687, 917
DpnI GATC 6 cut(s) 133, 392, 591, 697, 809, 1156
DpnII GATC 6 cut(s) 131, 390, 589, 695, 807, 1154
DraIII CACNNNGTG 1 cut(s) 310
EaeI YGGCCR 1 cut(s) 1026
Eam1104I CTCTTC 1 cut(s) 122
EarI CTCTTC 1 cut(s) 122
Eco105I TACGTA 1 cut(s) 1070
Eco130I CCWWGG 2 cut(s) 345, 817
Eco24I GRGCYC 1 cut(s) 836
Eco32I GATATC 2 cut(s) 207, 949
Eco47I GGWCC 2 cut(s) 7, 89
EcoRII CCWGG 2 cut(s) 173, 568
EcoRV GATATC 2 cut(s) 207, 949
EcoT14I CCWWGG 2 cut(s) 345, 817
EcoT38I GRGCYC 1 cut(s) 836
ErhI CCWWGG 2 cut(s) 345, 817
Esp3I CGTCTC 1 cut(s) 1103
FaeI CATG 4 cut(s) 935, 964, 1027, 1109
FaiI YATR 8 cut(s) 74, 362, 933, 962, 1025, 1055, 1107, 1228
FaqI GGGAC 3 cut(s) 169, 1145, 1151
FatI CATG 4 cut(s) 931, 960, 1023, 1105
FauI CCCGC 2 cut(s) 684, 1206
Fnu4HI GCNGC 7 cut(s) 1013, 1016, 1089, 1115, 1175, 1178, 1221
FokI GGATG 1 cut(s) 905
FriOI GRGCYC 1 cut(s) 836
Fsp4HI GCNGC 7 cut(s) 1013, 1016, 1089, 1115, 1175, 1178, 1221
FspBI CTAG 2 cut(s) 956, 1019
GlaI GCGC 1 cut(s) 86
GluI GCNGC 7 cut(s) 1013, 1016, 1089, 1115, 1175, 1178, 1221
GsaI CCCAGC 1 cut(s) 401
GsuI CTGGAG 1 cut(s) 590
HaeIII GGCC 4 cut(s) 43, 56, 261, 1028
HapII CCGG 3 cut(s) 150, 502, 1163
HgaI GACGC 2 cut(s) 1120, 1180
HhaI GCGC 1 cut(s) 87
Hin1I GRCGYC 2 cut(s) 585, 1172
Hin1II CATG 4 cut(s) 935, 964, 1027, 1109
Hin6I GCGC 1 cut(s) 85
HinP1I GCGC 1 cut(s) 85
HincII GTYRAC 1 cut(s) 140
HindII GTYRAC 1 cut(s) 140
HinfI GANTC 2 cut(s) 136, 226
HpaII CCGG 3 cut(s) 150, 502, 1163
Hpy166II GTNNAC 7 cut(s) 10, 140, 246, 283, 514, 1048, 1170
Hpy188I TCNGA 5 cut(s) 211, 465, 480, 1007, 1129
Hpy188III TCNNGA 3 cut(s) 614, 829, 932
Hpy8I GTNNAC 7 cut(s) 10, 140, 246, 283, 514, 1048, 1170
Hpy99I CGWCG 1 cut(s) 590
HpyAV CCTTC 6 cut(s) 452, 478, 607, 916, 1002, 1160
HpyCH4III ACNGT 8 cut(s) 17, 79, 310, 323, 428, 707, 899, 1125
HpyCH4IV ACGT 3 cut(s) 521, 585, 1069
HpyF10VI GCNNNNNNNGC 4 cut(s) 683, 822, 831, 1111
HpyF3I CTNAG 2 cut(s) 687, 917
HpySE526I ACGT 3 cut(s) 521, 585, 1069
Hsp92I GRCGYC 2 cut(s) 585, 1172
Hsp92II CATG 4 cut(s) 935, 964, 1027, 1109
HspAI GCGC 1 cut(s) 85
KpnI GGTACC 1 cut(s) 149
KspI CCGCGG 1 cut(s) 1181
Kzo9I GATC 6 cut(s) 131, 390, 589, 695, 807, 1154
LmnI GCTCC 1 cut(s) 793
Lsp1109I GCAGC 4 cut(s) 999, 1027, 1075, 1207
LweI GCATC 2 cut(s) 72, 1207
MaeI CTAG 2 cut(s) 956, 1019
MaeII ACGT 3 cut(s) 521, 585, 1069
MaeIII GTNAC 8 cut(s) 196, 323, 679, 701, 763, 776, 977, 1065
MalI GATC 6 cut(s) 133, 392, 591, 697, 809, 1156
MboI GATC 6 cut(s) 131, 390, 589, 695, 807, 1154
MboII GAAGA 5 cut(s) 88, 139, 637, 880, 1090
MfeI CAATTG 2 cut(s) 549, 837
MflI RGATCY 1 cut(s) 695
MhlI GDGCHC 4 cut(s) 173, 248, 285, 836
MluCI AATT 4 cut(s) 549, 640, 711, 837
MlyI GAGTC 2 cut(s) 145, 235
MmeI TCCRAC 2 cut(s) 443, 985
MseI TTAA 3 cut(s) 498, 972, 993
MslI CAYNNNNRTG 1 cut(s) 15
MspA1I CMGCKG 2 cut(s) 691, 1180
MspI CCGG 3 cut(s) 150, 502, 1163
MspR9I CCNGG 5 cut(s) 150, 175, 503, 570, 1163
MunI CAATTG 2 cut(s) 549, 837
MvaI CCWGG 2 cut(s) 175, 570
MvnI CGCG 4 cut(s) 87, 416, 1114, 1180
MwoI GCNNNNNNNGC 4 cut(s) 683, 822, 831, 1111
NciI CCSGG 3 cut(s) 150, 503, 1163
NdeII GATC 6 cut(s) 131, 390, 589, 695, 807, 1154
NlaIII CATG 4 cut(s) 935, 964, 1027, 1109
NlaIV GGNNCC 2 cut(s) 147, 815
NmuCI GTSAC 7 cut(s) 196, 323, 679, 701, 763, 776, 977
NspV TTCGAA 1 cut(s) 866
OliI CACNNNNGTG 1 cut(s) 15
PagI TCATGA 1 cut(s) 931
PcsI WCGNNNNNNNCGW 1 cut(s) 1066
PflMI CCANNNNNTGG 1 cut(s) 613
PkrI GCNGC 7 cut(s) 1014, 1017, 1090, 1116, 1176, 1179, 1222
PleI GAGTC 2 cut(s) 144, 234
PpsI GAGTC 2 cut(s) 144, 234
Ppu21I YACGTR 1 cut(s) 1070
Psp6I CCWGG 2 cut(s) 173, 568
PspFI CCCAGC 1 cut(s) 397
PspGI CCWGG 2 cut(s) 173, 568
PspN4I GGNNCC 2 cut(s) 147, 815
PspPI GGNCC 5 cut(s) 7, 41, 55, 89, 260
PstI CTGCAG 2 cut(s) 738, 1017
PstNI CAGNNNCTG 1 cut(s) 613
PsuI RGATCY 1 cut(s) 695
RsaI GTAC 3 cut(s) 147, 603, 1122
RsaNI GTAC 3 cut(s) 146, 602, 1121
RseI CAYNNNNRTG 1 cut(s) 15
SacII CCGCGG 1 cut(s) 1181
SaqAI TTAA 3 cut(s) 498, 972, 993
SatI GCNGC 7 cut(s) 1013, 1016, 1089, 1115, 1175, 1178, 1221
Sau3AI GATC 6 cut(s) 131, 390, 589, 695, 807, 1154
Sau96I GGNCC 5 cut(s) 7, 41, 55, 89, 260
ScaI AGTACT 1 cut(s) 1122
SchI GAGTC 2 cut(s) 145, 235
ScrFI CCNGG 5 cut(s) 150, 175, 503, 570, 1163
SduI GDGCHC 4 cut(s) 173, 248, 285, 836
SfaNI GCATC 2 cut(s) 72, 1207
SfcI CTRYAG 2 cut(s) 734, 1013
Sfr303I CCGCGG 1 cut(s) 1181
SfuI TTCGAA 1 cut(s) 866
SgrBI CCGCGG 1 cut(s) 1181
SinI GGWCC 2 cut(s) 7, 89
SmiMI CAYNNNNRTG 1 cut(s) 15
SnaBI TACGTA 1 cut(s) 1070
Sse9I AATT 4 cut(s) 549, 640, 711, 837
SsiI CCGC 8 cut(s) 87, 357, 691, 1114, 1175, 1178, 1180, 1213
SspMI CTAG 2 cut(s) 956, 1019
StyD4I CCNGG 5 cut(s) 148, 173, 501, 568, 1161
StyI CCWWGG 2 cut(s) 345, 817
TaaI ACNGT 8 cut(s) 17, 79, 310, 323, 428, 707, 899, 1125
TaiI ACGT 3 cut(s) 524, 588, 1072
TaqI TCGA 5 cut(s) 134, 393, 588, 866, 1153
TasI AATT 4 cut(s) 549, 640, 711, 837
TatI WGTACW 1 cut(s) 1120
TauI GCSGC 3 cut(s) 1117, 1177, 1180
Tru1I TTAA 3 cut(s) 498, 972, 993
Tru9I TTAA 3 cut(s) 498, 972, 993
TscAI CASTG 1 cut(s) 433
TseFI GTSAC 7 cut(s) 196, 323, 679, 701, 763, 776, 977
TseI GCWGC 4 cut(s) 1012, 1015, 1088, 1220
Tsp45I GTSAC 7 cut(s) 196, 323, 679, 701, 763, 776, 977
TspDTI ATGAA 3 cut(s) 497, 639, 920
TspGWI ACGGA 2 cut(s) 582, 1198
TspRI CASTG 1 cut(s) 433
Van91I CCANNNNNTGG 1 cut(s) 613
VneI GTGCAC 2 cut(s) 244, 281
VpaK11BI GGWCC 2 cut(s) 7, 89
XspI CTAG 2 cut(s) 956, 1019
ZraI GACGTC 1 cut(s) 586
ZrmI AGTACT 1 cut(s) 1122
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.