Rw6G013470

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0000124
Physical Location & Seq
Reverse (-)
24902079 .. 24905677
3599 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G013470.1

Sequence Viewer

Length: 1509 bp
ATGGGTATTCACAACGGGGGGTGTCCCATTGAGATTGGGGGAGACATTAGTGCAGCTGAATATGGCAATGTGGTAGGTCCGATGCTTGGGGATGGTGGCAATATTGCACTGGAAAATTTGCGGTTCTTTGTGCGTGACAGGGAAATTGTGGACGACACTTTCATTATAGCTTACGTATTGTTGGCACTGACCACTGTGATTTGTCCTGGAACAAGTAATGTGGTCCAAAGTGGGATGTTGCCTTTACTAGAGACCACAGACAAAAAAACCAAGAAACATGCCGACACGGGGGACAACTATAATAAGGGAAACAGTGTGGAGAAGCCGGTGAATAACGAGGAGTCTGTCGGATTCCCATTAAGGAAATCACTACATGAAGACTTGTTTGATATTATGATGGACGTCGGGAGGTTGAAAGAAGATAGGGCGGTTGTTAAGGAAATTGTAATAGTAATACCCAACAGAGTCACAGAGCTGAGAAATGGAGTGTTGCTTATAGTCGAATCCTTTTTACATGTCAAGCAAGACTGTGTTGTTGAGGTGAGAGAGGAGCAGCAATTGATGCGGATGAACAGGGAGTACGCCCAGAAATGGGAAATTCTAGACAACACTTATATGGGGAAGGAGGCTAGAGTAGAGCAAGGAAATGAGCGTCATGAGAAGGAATTGTGCATGGGAGCAGAACATATTACAAATCAGCAGGGTGACAAACTTATAGCAGAAGCACTGCATGACCGTCGTAATGCATTTCCGTTAGACTGTAAAAGTATCCCAACAGGAGTACAAAGTCCGGATTTGAAAATGTTAGGGGAAGAAGCCAGCCGCAAAAGCAAGGGTGTGAAGCGAACTCATTCACTTGCTCTCAGTGATAACAGAAGTGATAAATACGACTACATCAAGTACGTAATGGGGTATACGGGAATGGATGATGAAACTTTTGGGACCATTTATTGCTTGTCCATACAGATTGAAGCTGCCAATACAAGATCTGGATGTCGAGATAGGGGCGAAGTTGTTTACAGAGGCGACTTAGTGACACTATACCCTTGTGTATGGGTTTCGGGAAGTTATAGAGCTAGTCATAATGAGGATCGCTCACTGGGAGAGTGGGTGGAGCACACAAGGGAAGTATGCAAGTTGGATAGATTCAACGGTAAGATTGATAAGTGCGAGAAGTTACAACACATTGACCGTGTCATGACGGTTGAGAACTTAAAGCAAAACGGGAGAGGAAAAACGGACTGTCTTAAAGTACCGAACAACGAGATGGCAATAGCAATAGAAGATGTCATACAAGGGAGTTACTATGGTAGGGAAGCAGGAATGGCGCAAGTAAGGGTGGAGACCCCATCAATGCCTCATCCTTTTGAAGAATGGGGGTGTGACGAGTTTCATCTATTTCATAATACGGCTGATTGGATTGGAGATAGGCTTGAATGGGGGAAGAAAGACCCTAAGGTGCTGAAAATGTCTAACAAGCGGATTGGGAAAGATGAAAGTTTAGGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

502

Amino Acids

56.74

Weight (kDa)

5.52

Isoelectric Point (pI)

33.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000124)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g10992 FvH4_2g25150 FvH4_2g27910 FvH4_2g27931 FvH4_4g09443 FvH4_4g09490 FvH4_4g15990 FvH4_4g15991 FvH4_6g07180 FvH4_6g40320 FvH4_7g10222 FvH4_7g10251
rosa_chinensis RchiOBHm_Chr2g0155611
rosa_laevigata RLG00000009253 RLG00000009254 RLG00000011848 RLG00000017301 RLG00000017302 RLG00000034909
rosa_multiflora Rmu_co8063658.1_g000001 Rmu_co8240443.1_g000001 Rmu_co8264451.1_g000001 Rmu_co8381937.1_g000001 Rmu_co8419903.1_g000001 Rmu_co8513405.1_g000002 Rmu_co8522915.1_g000001 Rmu_co8522915.1_g000004 Rmu_sc0000279.1_g000024 Rmu_sc0000279.1_g000048 Rmu_sc0000642.1_g000017 Rmu_sc0002045.1_g000015 Rmu_sc0002045.1_g000018 Rmu_sc0002045.1_g000023 Rmu_sc0002045.1_g000028 Rmu_sc0003047.1_g000008 Rmu_sc0003179.1_g000019 Rmu_sc0003179.1_g000020 Rmu_sc0003179.1_g000022 Rmu_sc0003179.1_g000023 Rmu_sc0003422.1_g000011 Rmu_sc0004999.1_g000014 Rmu_sc0005712.1_g000018 Rmu_sc0005712.1_g000023 Rmu_sc0006198.1_g000019 Rmu_sc0006373.1_g000005 Rmu_sc0006514.1_g000028 Rmu_sc0006514.1_g000031 Rmu_sc0007367.1_g000010 Rmu_sc0011475.1_g000002 Rmu_sc0025304.1_g000001 Rmu_ssc0000161.1_g000030 Rmu_ssc0000161.1_g000032 Rmu_ssc0000387.1_g000018
rosa_roxburghii Rroxscaffold_1G00031090 Rroxscaffold_1G00032770 Rroxscaffold_1G00068950 Rroxscaffold_1G00069000 Rroxscaffold_1G00069010 Rroxscaffold_2G00129060 Rroxscaffold_2G00129100 Rroxscaffold_4G00309310 Rroxscaffold_4G00309320 Rroxscaffold_5G00350620 Rroxscaffold_5G00350630 Rroxscaffold_7G00162650 Rroxscaffold_7G00162660 Rroxscaffold_7G00162710
rosa_rugosa Rorug02G0564700 Rorug02G0564700 Rorug03G0343100 Rorug04G0189700 Rorug05G0102800 Rorug05G0102900 Rorug05G0103000 Rorug05G0106500 Rorug05G0106600 Rorug05G0106700 Rorug05G0252800 Rorug07G0182100 Rorug07G0283500 Rorug07G0283600
rosa_samantha Rh1AG004000 Rh1AG004100 Rh1AG004200 Rh1AG004400 Rh1AG004500 Rh1AG004600 Rh1AG004800 Rh1AG004900 Rh1AG005300 Rh1AG007000 Rh1AG115000 Rh1CG049400 Rh1CG055400 Rh1CG111000 Rh1DG053600 Rh1DG053700 Rh1DG059300 Rh1DG119700 Rh1DG177100 Rh1DG177200 Rh2AG353800 Rh2AG354000 Rh2AG354100 Rh2AG354300 Rh2AG354400 Rh2AG354500 Rh2AG354600 Rh2AG354700 Rh2AG642300 Rh2AG642400 Rh2AG642500 Rh2BG336500 Rh2BG336600 Rh2BG336700 Rh2BG336800 Rh2BG336900 Rh2CG299900 Rh2CG300000 Rh2CG300100 Rh2DG337000 Rh2DG337100 Rh3AG246600 Rh3BG121900 Rh3BG122300 Rh3BG122600 Rh3BG122700 Rh3DG304800 Rh3DG304900 Rh4AG148800 Rh4AG249000 Rh4AG249100 Rh4AG249200 Rh4BG182700 Rh4BG182800 Rh4BG182900 Rh4BG254400 Rh4BG254500 Rh4BG254600 Rh4CG155500 Rh4CG155700 Rh4DG057900 Rh4DG058000 Rh4DG058100 Rh4DG058200 Rh4DG129100 Rh5AG364500 Rh5AG364600 Rh5AG364800 Rh5AG365300 Rh5CG363700 Rh5CG497600 Rh5DG239500 Rh5DG239600 Rh6AG173500 Rh6AG175400 Rh6BG075900 Rh6BG076300 Rh6BG076400 Rh6BG076500 Rh6BG076600 Rh6CG151000 Rh6CG151200 Rh6CG151300 Rh6CG151400 Rh6CG205200 Rh6CG205300 Rh6CG419700 Rh6CG419900 Rh6CG420100 Rh6DG498700 Rh6DG498800 Rh7AG329000 Rh7AG329100 Rh7AG329300 Rh7AG329400 Rh7AG353000 Rh7AG353100 Rh7AG353300 Rh7AG353400 Rh7AG353500 Rh7CG346400 Rh7CG346500 Rh7CG346700 Rh7CG370800 Rh7CG370900 Rh7CG371000 Rh7CG371100 Rh7DG325000 Rh7DG325100 Rh7DG325200 Rh7DG325300 Rh7DG353100 Rh7DG353200 Rh7DG353300 Rh7DG363500 Rh7DG364000
rosa_wichuraiana Rw0G002290 Rw0G012780 Rw1G000260 Rw1G000270 Rw1G010400 Rw1G010410 Rw1G010420 Rw1G010430 Rw1G010440 Rw2G003210 Rw2G003220 Rw4G010970 Rw5G048520 Rw6G013320 Rw6G013470 Rw6G014940 Rw6G016570 Rw6G016590 Rw6G016600 Rw6G016610 Rw6G016620 Rw6G035450 Rw7G027760 Rw7G030460

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 405
AccI GTMKAC 1 cut(s) 914
AccIII TCCGGA 1 cut(s) 790
AciI CCGC 5 cut(s) 121, 428, 565, 823, 1480
AclWI GGATC 1 cut(s) 1098
AcsI RAATTY 2 cut(s) 115, 597
AcyI GRCGYC 1 cut(s) 402
AfaI GTAC 4 cut(s) 581, 783, 902, 1254
AfiI CCNNNNNNNGG 4 cut(s) 86, 288, 591, 592
AflIII ACRYGT 1 cut(s) 514
AgsI TTSAA 6 cut(s) 415, 799, 971, 1150, 1370, 1436
AjnI CCWGG 1 cut(s) 205
AluBI AGCT 5 cut(s) 56, 170, 475, 974, 1076
AluI AGCT 5 cut(s) 56, 170, 475, 974, 1076
Alw21I GWGCWC 1 cut(s) 1119
Alw26I GTCTC 3 cut(s) 36, 245, 1337
AlwI GGATC 1 cut(s) 1098
Aor13HI TCCGGA 1 cut(s) 790
ApeKI GCWGC 3 cut(s) 53, 553, 974
ApoI RAATTY 2 cut(s) 115, 597
Asp700I GAANNNNTTC 1 cut(s) 850
AspLEI GCGC 1 cut(s) 1330
AspS9I GGNCC 3 cut(s) 77, 223, 942
AsuHPI GGTGA 3 cut(s) 340, 553, 716
AvaII GGWCC 3 cut(s) 77, 223, 942
AxyI CCTNAGG 1 cut(s) 1455
BarI GAAGNNNNNNTAC 2 cut(s) 1275, 1307
BbsI GAAGAC 1 cut(s) 384
Bbv12I GWGCWC 1 cut(s) 1119
BbvI GCAGC 3 cut(s) 65, 565, 961
BccI CCATC 4 cut(s) 86, 391, 1261, 1357
BceAI ACGGC 1 cut(s) 1425
BcgI CGANNNNNNTGC 2 cut(s) 719, 753
BciT130I CCWGG 1 cut(s) 207
BciVI GTATCC 1 cut(s) 779
BcoDI GTCTC 3 cut(s) 36, 245, 1337
BfaI CTAG 4 cut(s) 248, 602, 630, 1077
BfuI GTATCC 1 cut(s) 779
BglII AGATCT 1 cut(s) 986
BisI GCNGC 4 cut(s) 54, 554, 823, 975
BlsI GCNGC 4 cut(s) 55, 555, 824, 976
Bme1390I CCNGG 1 cut(s) 207
Bme18I GGWCC 3 cut(s) 77, 223, 942
BmgT120I GGNCC 3 cut(s) 77, 223, 942
BmiI GGNNCC 1 cut(s) 943
BmrFI CCNGG 1 cut(s) 207
BmrI ACTGGG 1 cut(s) 1109
BmsI GCATC 2 cut(s) 72, 552
BmuI ACTGGG 1 cut(s) 1109
BpiI GAAGAC 1 cut(s) 384
BplI GAGNNNNNCTC 2 cut(s) 1079, 1111
BsaAI YACGTR 2 cut(s) 175, 904
BsaHI GRCGYC 1 cut(s) 402
BsaI GGTCTC 2 cut(s) 245, 1337
BsaWI WCCGGW 1 cut(s) 790
BsaXI ACNNNNNCTCC 2 cut(s) 1095, 1125
Bsc4I CCNNNNNNNGG 4 cut(s) 86, 288, 591, 592
Bse118I RCCGGY 1 cut(s) 325
Bse1I ACTGG 2 cut(s) 114, 1104
Bse21I CCTNAGG 1 cut(s) 1455
Bse3DI GCAATG 1 cut(s) 73
BseAI TCCGGA 1 cut(s) 790
BseBI CCWGG 1 cut(s) 207
BseGI GGATG 6 cut(s) 97, 240, 573, 931, 998, 1360
BseLI CCNNNNNNNGG 4 cut(s) 86, 288, 591, 592
BseMI GCAATG 1 cut(s) 73
BseMII CTCAG 2 cut(s) 467, 877
BseNI ACTGG 2 cut(s) 114, 1104
BseRI GAGGAG 2 cut(s) 353, 563
BseXI GCAGC 3 cut(s) 65, 565, 961
BsgI GTGCAG 1 cut(s) 72
BsiHKAI GWGCWC 1 cut(s) 1119
BsiSI CCGG 2 cut(s) 326, 791
BslFI GGGAC 3 cut(s) 9, 305, 955
BslI CCNNNNNNNGG 4 cut(s) 86, 288, 591, 592
BsmAI GTCTC 3 cut(s) 36, 245, 1337
BsmFI GGGAC 3 cut(s) 9, 305, 955
Bso31I GGTCTC 2 cut(s) 245, 1337
Bsp1286I GDGCHC 1 cut(s) 1119
Bsp13I TCCGGA 1 cut(s) 790
Bsp143I GATC 2 cut(s) 986, 1090
BspACI CCGC 5 cut(s) 121, 428, 565, 823, 1480
BspCNI CTCAG 2 cut(s) 468, 876
BspEI TCCGGA 1 cut(s) 790
BspHI TCATGA 2 cut(s) 655, 1197
BspLI GGNNCC 1 cut(s) 943
BspPI GGATC 1 cut(s) 1098
BspTNI GGTCTC 2 cut(s) 245, 1337
BsrDI GCAATG 1 cut(s) 73
BsrFI RCCGGY 1 cut(s) 325
BsrI ACTGG 2 cut(s) 114, 1104
BssAI RCCGGY 1 cut(s) 325
BssMI GATC 2 cut(s) 986, 1090
BssNAI GTATAC 1 cut(s) 915
BssNI GRCGYC 1 cut(s) 402
Bst1107I GTATAC 1 cut(s) 915
Bst2UI CCWGG 1 cut(s) 207
Bst4CI ACNGT 9 cut(s) 196, 314, 530, 737, 761, 1154, 1193, 1204, 1244
BstACI GRCGYC 1 cut(s) 402
BstAPI GCANNNNNTGC 1 cut(s) 562
BstBAI YACGTR 2 cut(s) 175, 904
BstC8I GCNNGC 1 cut(s) 820
BstDEI CTNAG 4 cut(s) 476, 863, 1030, 1455
BstF5I GGATG 6 cut(s) 97, 240, 573, 931, 998, 1360
BstHHI GCGC 1 cut(s) 1330
BstKTI GATC 2 cut(s) 989, 1093
BstMAI GTCTC 3 cut(s) 36, 245, 1337
BstMBI GATC 2 cut(s) 986, 1090
BstMWI GCNNNNNNNGC 3 cut(s) 562, 828, 1325
BstNI CCWGG 1 cut(s) 207
BstNSI RCATGY 2 cut(s) 281, 518
BstSCI CCNGG 1 cut(s) 205
BstSNI TACGTA 2 cut(s) 175, 904
BstV1I GCAGC 3 cut(s) 65, 565, 961
BstV2I GAAGAC 1 cut(s) 384
BstX2I RGATCY 1 cut(s) 986
BstYI RGATCY 1 cut(s) 986
BstZ17I GTATAC 1 cut(s) 915
Bsu36I CCTNAGG 1 cut(s) 1455
BsuI GTATCC 1 cut(s) 779
BtsCI GGATG 6 cut(s) 97, 240, 573, 931, 998, 1360
BtsI GCAGTG 1 cut(s) 725
BtsIMutI CAGTG 7 cut(s) 107, 185, 192, 319, 725, 871, 1097
Cac8I GCNNGC 1 cut(s) 820
CciI TCATGA 2 cut(s) 655, 1197
CfoI GCGC 1 cut(s) 1330
Cfr10I RCCGGY 1 cut(s) 325
Cfr13I GGNCC 3 cut(s) 77, 223, 942
CseI GACGC 1 cut(s) 641
Csp6I GTAC 4 cut(s) 580, 782, 901, 1253
CspCI CAANNNNNGTGG 2 cut(s) 201, 236
CviAII CATG 7 cut(s) 278, 374, 515, 656, 673, 731, 1198
CviQI GTAC 4 cut(s) 580, 782, 901, 1253
DdeI CTNAG 4 cut(s) 476, 863, 1030, 1455
DpnI GATC 2 cut(s) 988, 1092
DpnII GATC 2 cut(s) 986, 1090
Eco105I TACGTA 2 cut(s) 175, 904
Eco31I GGTCTC 2 cut(s) 245, 1337
Eco47I GGWCC 3 cut(s) 77, 223, 942
Eco81I CCTNAGG 1 cut(s) 1455
EcoRII CCWGG 1 cut(s) 205
EcoT22I ATGCAT 1 cut(s) 748
FaeI CATG 7 cut(s) 281, 377, 518, 659, 676, 734, 1201
FaqI GGGAC 3 cut(s) 9, 305, 955
FatI CATG 7 cut(s) 277, 373, 514, 655, 672, 730, 1197
FblI GTMKAC 1 cut(s) 914
Fnu4HI GCNGC 4 cut(s) 54, 554, 823, 975
FokI GGATG 6 cut(s) 104, 247, 580, 938, 1005, 1347
Fsp4HI GCNGC 4 cut(s) 54, 554, 823, 975
FspBI CTAG 4 cut(s) 248, 602, 630, 1077
GlaI GCGC 1 cut(s) 1329
GluI GCNGC 4 cut(s) 54, 554, 823, 975
HapII CCGG 2 cut(s) 326, 791
HgaI GACGC 1 cut(s) 641
HhaI GCGC 1 cut(s) 1330
Hin1I GRCGYC 1 cut(s) 402
Hin1II CATG 7 cut(s) 281, 377, 518, 659, 676, 734, 1201
Hin6I GCGC 1 cut(s) 1328
HinP1I GCGC 1 cut(s) 1328
HinfI GANTC 5 cut(s) 341, 351, 465, 503, 1146
HpaII CCGG 2 cut(s) 326, 791
HphI GGTGA 3 cut(s) 340, 553, 716
Hpy166II GTNNAC 3 cut(s) 151, 915, 1018
Hpy188I TCNGA 2 cut(s) 81, 350
Hpy188III TCNNGA 8 cut(s) 406, 602, 656, 791, 990, 998, 1062, 1198
Hpy8I GTNNAC 3 cut(s) 151, 915, 1018
Hpy99I CGWCG 2 cut(s) 407, 741
HpyAV CCTTC 2 cut(s) 616, 655
HpyCH4III ACNGT 9 cut(s) 196, 314, 530, 737, 761, 1154, 1193, 1204, 1244
HpyCH4IV ACGT 3 cut(s) 174, 402, 903
HpyCH4V TGCA 6 cut(s) 53, 107, 672, 730, 746, 1134
HpyF10VI GCNNNNNNNGC 3 cut(s) 562, 828, 1325
HpyF3I CTNAG 4 cut(s) 476, 863, 1030, 1455
HpySE526I ACGT 3 cut(s) 174, 402, 903
Hsp92I GRCGYC 1 cut(s) 402
Hsp92II CATG 7 cut(s) 281, 377, 518, 659, 676, 734, 1201
HspAI GCGC 1 cut(s) 1328
Kpn2I TCCGGA 1 cut(s) 790
Kzo9I GATC 2 cut(s) 986, 1090
LmnI GCTCC 3 cut(s) 550, 677, 1114
Lsp1109I GCAGC 3 cut(s) 65, 565, 961
LweI GCATC 2 cut(s) 72, 552
MaeI CTAG 4 cut(s) 248, 602, 630, 1077
MaeII ACGT 3 cut(s) 174, 402, 903
MaeIII GTNAC 7 cut(s) 134, 466, 704, 1033, 1176, 1301, 1382
MalI GATC 2 cut(s) 988, 1092
MboI GATC 2 cut(s) 986, 1090
MboII GAAGA 6 cut(s) 389, 431, 824, 1295, 1382, 1456
MfeI CAATTG 1 cut(s) 557
MflI RGATCY 1 cut(s) 986
MhlI GDGCHC 1 cut(s) 1119
MluCI AATT 6 cut(s) 115, 144, 441, 557, 597, 665
MlyI GAGTC 2 cut(s) 350, 474
MmeI TCCRAC 2 cut(s) 328, 1119
MnlI CCTC 9 cut(s) 331, 402, 532, 541, 619, 1016, 1081, 1223, 1368
Mph1103I ATGCAT 1 cut(s) 748
MroI TCCGGA 1 cut(s) 790
MroXI GAANNNNTTC 1 cut(s) 850
MseI TTAA 4 cut(s) 359, 435, 1214, 1248
MslI CAYNNNNRTG 1 cut(s) 614
MspA1I CMGCKG 1 cut(s) 56
MspI CCGG 2 cut(s) 326, 791
MspR9I CCNGG 1 cut(s) 207
MunI CAATTG 1 cut(s) 557
MvaI CCWGG 1 cut(s) 207
MwoI GCNNNNNNNGC 3 cut(s) 562, 828, 1325
NdeII GATC 2 cut(s) 986, 1090
NlaIII CATG 7 cut(s) 281, 377, 518, 659, 676, 734, 1201
NlaIV GGNNCC 1 cut(s) 943
NmuCI GTSAC 5 cut(s) 134, 466, 704, 1033, 1382
NsiI ATGCAT 1 cut(s) 748
NspI RCATGY 2 cut(s) 281, 518
PagI TCATGA 2 cut(s) 655, 1197
PciI ACATGT 1 cut(s) 514
PdmI GAANNNNTTC 1 cut(s) 850
PfeI GAWTC 3 cut(s) 351, 503, 1146
PflFI GACNNNGTC 1 cut(s) 1193
PfoI TCCNGGA 1 cut(s) 205
PkrI GCNGC 4 cut(s) 55, 555, 824, 976
PleI GAGTC 2 cut(s) 349, 473
PpsI GAGTC 2 cut(s) 349, 473
Ppu21I YACGTR 2 cut(s) 175, 904
PscI ACATGT 1 cut(s) 514
Psp6I CCWGG 1 cut(s) 205
PspGI CCWGG 1 cut(s) 205
PspN4I GGNNCC 1 cut(s) 943
PspPI GGNCC 3 cut(s) 77, 223, 942
PsrI GAACNNNNNNTAC 2 cut(s) 563, 595
PsuI RGATCY 1 cut(s) 986
PsyI GACNNNGTC 1 cut(s) 1193
PvuII CAGCTG 1 cut(s) 56
RsaI GTAC 4 cut(s) 581, 783, 902, 1254
RsaNI GTAC 4 cut(s) 580, 782, 901, 1253
RseI CAYNNNNRTG 1 cut(s) 614
SaqAI TTAA 4 cut(s) 359, 435, 1214, 1248
SatI GCNGC 4 cut(s) 54, 554, 823, 975
Sau3AI GATC 2 cut(s) 986, 1090
Sau96I GGNCC 3 cut(s) 77, 223, 942
SchI GAGTC 2 cut(s) 350, 474
ScrFI CCNGG 1 cut(s) 207
SduI GDGCHC 1 cut(s) 1119
SfaNI GCATC 2 cut(s) 72, 552
SinI GGWCC 3 cut(s) 77, 223, 942
SmiMI CAYNNNNRTG 1 cut(s) 614
SnaBI TACGTA 2 cut(s) 175, 904
Sse9I AATT 6 cut(s) 115, 144, 441, 557, 597, 665
SsiI CCGC 5 cut(s) 121, 428, 565, 823, 1480
SspI AATATT 1 cut(s) 103
SspMI CTAG 4 cut(s) 248, 602, 630, 1077
StyD4I CCNGG 1 cut(s) 205
TaaI ACNGT 9 cut(s) 196, 314, 530, 737, 761, 1154, 1193, 1204, 1244
TaiI ACGT 3 cut(s) 177, 405, 906
TaqI TCGA 2 cut(s) 501, 997
TasI AATT 6 cut(s) 115, 144, 441, 557, 597, 665
TatI WGTACW 1 cut(s) 781
TauI GCSGC 1 cut(s) 825
TfiI GAWTC 3 cut(s) 351, 503, 1146
Tru1I TTAA 4 cut(s) 359, 435, 1214, 1248
Tru9I TTAA 4 cut(s) 359, 435, 1214, 1248
TscAI CASTG 7 cut(s) 114, 192, 199, 319, 732, 871, 1104
TseFI GTSAC 5 cut(s) 134, 466, 704, 1033, 1382
TseI GCWGC 3 cut(s) 53, 553, 974
Tsp45I GTSAC 5 cut(s) 134, 466, 704, 1033, 1382
TspDTI ATGAA 7 cut(s) 151, 390, 584, 945, 1382, 1391, 1509
TspGWI ACGGA 2 cut(s) 741, 1253
TspRI CASTG 7 cut(s) 114, 192, 199, 319, 732, 871, 1104
Tth111I GACNNNGTC 1 cut(s) 1193
VpaK11BI GGWCC 3 cut(s) 77, 223, 942
XapI RAATTY 2 cut(s) 115, 597
XbaI TCTAGA 1 cut(s) 601
XceI RCATGY 2 cut(s) 281, 518
XmiI GTMKAC 1 cut(s) 914
XmnI GAANNNNTTC 1 cut(s) 850
XspI CTAG 4 cut(s) 248, 602, 630, 1077
ZraI GACGTC 1 cut(s) 403
Zsp2I ATGCAT 1 cut(s) 748
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.