Rw1G010400

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
OG0000124
Physical Location & Seq
Reverse (-)
23320320 .. 23323525
3206 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G010400.1

Sequence Viewer

Length: 1626 bp
ATGGGCATACACGACGGTGGAGAAGGGATTGTGCTAGGGGAGGGCCAAGAAGCAAAGGAGTATGGAAAAACAGTTCGTCCAATGTGCGATGCGGATGGAAGAATGACAATTGAGTTGTTAACTGACATGGTAAGTAAAAGAAGAGAGGTGGACGACACTTTCAAGATTGCGTTTGCAATGTTGGCACTAACTTGTGTGATATTCCCGGGATTAGATGATGCGGTTGACGTAGGATTGTTGCTTCCACTTATGGAGACATCAAAAATAGTGCGAAAAAATTGGGCCTCTTTTGCAGTCAGTCGCCTAATGGAGGGTGTGAAACGTCACCAGGAGGAAGGAACTCCCGTCGTGGGGGGATGTTTGATATTTCTTCAACTTCTTTACCTTGACAAGGTGGGGGACGTTCTTACACCTGATAAGGACGACCTTTGTACACCTGTAATGTATTGGAAGACTAATAAGGTGCAGGAAATTGTGAACAAGATAAGGTTGACGGGAGGTCACAAAAGTCCTACTGTCATGTTGGAGAAGAGCAAGAGGACGAAGAGATTACAAGACGCAGGTCATGAATGCGGGGTTTCGGGATTCGGACTGAATCGGGACGACCACAAGACCATGATGGACTTGCAGTTGGATGTGAGTTCGATGAAGGACCGAATGTGGGATATGAAATGGGAAGTAAGTCGAATGCAACCCAAATTCTTGGATTTTACAAAGGGGGTAGAATTGGCACTTGAGGAACTGAAACAAACATTTTCACAAGTCAAAAGTGAATTTTACACAATCTCTAAGCAACAATTAGGGTTGGAAAGGATTAAGGAGGAGAAATTTCGGGTAATGAACAATGTGGTCAACGGCATGGGAGGGATTGACAAGACAAAAAGGCAGCCTTCCACCGTGGGAATGTGCAACGATGACTGCAGTGGAGAAACTCATTTGCCAAATAACAAGGTGATAAATTATGTTGTTGCGTACCTCAATAAGGAAGGAGGCAACAATTGGTATTGGCCTACACATTTTGAGATATTCTTACCTGTGCATGAAGGTTCAATCAAGGATGGCCATTGGATTCTCATTGTGGTTGACATGGTCACAAAGGTTGCTGAAGTATGGGATAGCGGACCAGGACCAGTACTACAGCCATCGAGAATGGAAAACATTTTGCTTGTGCTGAGACACATAGACGGGGTAATGTGGTTTGATAACATAACGCAACCTGGAAGCATGGTAAAGGTAGAAGATTTTACAATTGTTGAGGCCCCAAATTTGCCAAAGCAACAAAACGCATTTGACTGCGGTGTCTACGTCATACAAAACATGCAGCATTATCGGACCGAATGGGCAAAACAGTACGACTCGAAATCCCAGAGAGCAGCCATATTATTGGATTGTTTAACAGCCCCAAATAACGAGTCGGATGCAAACATAGGAGCGGCTATCGTAATTAGTGACAATGGGGTTGAAAAAACAGCAATGCAGCATGATGGTTTGCATCAGAATGGAGAAGGAAAGCATATGGAAGAATGGGAAGAAGGAGGGAAAGGGGAGTATAGACAGAGACAAGATCGTGCAGGACAAGGAGGGCATCGGAATGTTGGGACAACCTCCTATCAAAAACGCATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
HMG_box

Protein Analysis

541

Amino Acids

61.02

Weight (kDa)

5.82

Isoelectric Point (pI)

39.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_C48 PF02902 334 - 443 4.7e-13 Ulp1 protease family, C-terminal catalytic domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000124)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g10992 FvH4_2g25150 FvH4_2g27910 FvH4_2g27931 FvH4_4g09443 FvH4_4g09490 FvH4_4g15990 FvH4_4g15991 FvH4_6g07180 FvH4_6g40320 FvH4_7g10222 FvH4_7g10251
rosa_chinensis RchiOBHm_Chr2g0155611
rosa_laevigata RLG00000009253 RLG00000009254 RLG00000011848 RLG00000017301 RLG00000017302 RLG00000034909
rosa_multiflora Rmu_co8063658.1_g000001 Rmu_co8240443.1_g000001 Rmu_co8264451.1_g000001 Rmu_co8381937.1_g000001 Rmu_co8419903.1_g000001 Rmu_co8513405.1_g000002 Rmu_co8522915.1_g000001 Rmu_co8522915.1_g000004 Rmu_sc0000279.1_g000024 Rmu_sc0000279.1_g000048 Rmu_sc0000642.1_g000017 Rmu_sc0002045.1_g000015 Rmu_sc0002045.1_g000018 Rmu_sc0002045.1_g000023 Rmu_sc0002045.1_g000028 Rmu_sc0003047.1_g000008 Rmu_sc0003179.1_g000019 Rmu_sc0003179.1_g000020 Rmu_sc0003179.1_g000022 Rmu_sc0003179.1_g000023 Rmu_sc0003422.1_g000011 Rmu_sc0004999.1_g000014 Rmu_sc0005712.1_g000018 Rmu_sc0005712.1_g000023 Rmu_sc0006198.1_g000019 Rmu_sc0006373.1_g000005 Rmu_sc0006514.1_g000028 Rmu_sc0006514.1_g000031 Rmu_sc0007367.1_g000010 Rmu_sc0011475.1_g000002 Rmu_sc0025304.1_g000001 Rmu_ssc0000161.1_g000030 Rmu_ssc0000161.1_g000032 Rmu_ssc0000387.1_g000018
rosa_roxburghii Rroxscaffold_1G00031090 Rroxscaffold_1G00032770 Rroxscaffold_1G00068950 Rroxscaffold_1G00069000 Rroxscaffold_1G00069010 Rroxscaffold_2G00129060 Rroxscaffold_2G00129100 Rroxscaffold_4G00309310 Rroxscaffold_4G00309320 Rroxscaffold_5G00350620 Rroxscaffold_5G00350630 Rroxscaffold_7G00162650 Rroxscaffold_7G00162660 Rroxscaffold_7G00162710
rosa_rugosa Rorug02G0564700 Rorug02G0564700 Rorug03G0343100 Rorug04G0189700 Rorug05G0102800 Rorug05G0102900 Rorug05G0103000 Rorug05G0106500 Rorug05G0106600 Rorug05G0106700 Rorug05G0252800 Rorug07G0182100 Rorug07G0283500 Rorug07G0283600
rosa_samantha Rh1AG004000 Rh1AG004100 Rh1AG004200 Rh1AG004400 Rh1AG004500 Rh1AG004600 Rh1AG004800 Rh1AG004900 Rh1AG005300 Rh1AG007000 Rh1AG115000 Rh1CG049400 Rh1CG055400 Rh1CG111000 Rh1DG053600 Rh1DG053700 Rh1DG059300 Rh1DG119700 Rh1DG177100 Rh1DG177200 Rh2AG353800 Rh2AG354000 Rh2AG354100 Rh2AG354300 Rh2AG354400 Rh2AG354500 Rh2AG354600 Rh2AG354700 Rh2AG642300 Rh2AG642400 Rh2AG642500 Rh2BG336500 Rh2BG336600 Rh2BG336700 Rh2BG336800 Rh2BG336900 Rh2CG299900 Rh2CG300000 Rh2CG300100 Rh2DG337000 Rh2DG337100 Rh3AG246600 Rh3BG121900 Rh3BG122300 Rh3BG122600 Rh3BG122700 Rh3DG304800 Rh3DG304900 Rh4AG148800 Rh4AG249000 Rh4AG249100 Rh4AG249200 Rh4BG182700 Rh4BG182800 Rh4BG182900 Rh4BG254400 Rh4BG254500 Rh4BG254600 Rh4CG155500 Rh4CG155700 Rh4DG057900 Rh4DG058000 Rh4DG058100 Rh4DG058200 Rh4DG129100 Rh5AG364500 Rh5AG364600 Rh5AG364800 Rh5AG365300 Rh5CG363700 Rh5CG497600 Rh5DG239500 Rh5DG239600 Rh6AG173500 Rh6AG175400 Rh6BG075900 Rh6BG076300 Rh6BG076400 Rh6BG076500 Rh6BG076600 Rh6CG151000 Rh6CG151200 Rh6CG151300 Rh6CG151400 Rh6CG205200 Rh6CG205300 Rh6CG419700 Rh6CG419900 Rh6CG420100 Rh6DG498700 Rh6DG498800 Rh7AG329000 Rh7AG329100 Rh7AG329300 Rh7AG329400 Rh7AG353000 Rh7AG353100 Rh7AG353300 Rh7AG353400 Rh7AG353500 Rh7CG346400 Rh7CG346500 Rh7CG346700 Rh7CG370800 Rh7CG370900 Rh7CG371000 Rh7CG371100 Rh7DG325000 Rh7DG325100 Rh7DG325200 Rh7DG325300 Rh7DG353100 Rh7DG353200 Rh7DG353300 Rh7DG363500 Rh7DG364000
rosa_wichuraiana Rw0G002290 Rw0G012780 Rw1G000260 Rw1G000270 Rw1G010400 Rw1G010410 Rw1G010420 Rw1G010430 Rw1G010440 Rw2G003210 Rw2G003220 Rw4G010970 Rw5G048520 Rw6G013320 Rw6G013470 Rw6G014940 Rw6G016570 Rw6G016590 Rw6G016600 Rw6G016610 Rw6G016620 Rw6G035450 Rw7G027760 Rw7G030460

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1298
Acc36I ACCTGC 1 cut(s) 551
AccBSI CCGCTC 1 cut(s) 1433
AccI GTMKAC 1 cut(s) 1302
AciI CCGC 6 cut(s) 92, 221, 573, 1119, 1296, 1433
AcoI YGGCCR 1 cut(s) 1060
AcsI RAATTY 4 cut(s) 698, 773, 827, 1264
AcuI CTGAAG 1 cut(s) 1125
AfaI GTAC 4 cut(s) 433, 974, 1134, 1352
AfiI CCNNNNNNNGG 6 cut(s) 310, 350, 351, 391, 661, 982
AgsI TTSAA 4 cut(s) 163, 374, 1050, 1463
AhdI GACNNNNNGTC 1 cut(s) 498
AjnI CCWGG 3 cut(s) 327, 1123, 1216
AleI CACNNNNGTG 1 cut(s) 15
AloI GAACNNNNNNTCC 2 cut(s) 57, 89
Alw26I GTCTC 3 cut(s) 248, 1168, 1552
Ama87I CYCGRG 1 cut(s) 205
AoxI GGCC 5 cut(s) 43, 282, 1007, 1060, 1257
ApeKI GCWGC 4 cut(s) 886, 1321, 1373, 1477
ApoI RAATTY 4 cut(s) 698, 773, 827, 1264
ArsI GACNNNNNNTTYG 2 cut(s) 1397, 1429
AspS9I GGNCC 7 cut(s) 43, 282, 652, 1121, 1127, 1258, 1332
AsuC2I CCSGG 2 cut(s) 206, 207
AsuHPI GGTGA 2 cut(s) 317, 964
AvaI CYCGRG 1 cut(s) 205
AvaII GGWCC 4 cut(s) 652, 1121, 1127, 1332
BalI TGGCCA 1 cut(s) 1062
BbsI GAAGAC 1 cut(s) 458
BbvI GCAGC 4 cut(s) 898, 1333, 1385, 1489
BccI CCATC 5 cut(s) 89, 613, 1052, 1150, 1478
BceAI ACGGC 1 cut(s) 871
BcgI CGANNNNNNTGC 4 cut(s) 1310, 1344, 1400, 1434
BciT130I CCWGG 3 cut(s) 329, 1125, 1218
BcnI CCSGG 2 cut(s) 206, 207
BcoDI GTCTC 3 cut(s) 248, 1168, 1552
BfaI CTAG 1 cut(s) 35
BfmI CTRYAG 2 cut(s) 919, 1136
BfuAI ACCTGC 1 cut(s) 551
BisI GCNGC 5 cut(s) 887, 1322, 1374, 1434, 1478
BlsI GCNGC 5 cut(s) 888, 1323, 1375, 1435, 1479
BmcAI AGTACT 1 cut(s) 1134
Bme1390I CCNGG 5 cut(s) 206, 207, 329, 1125, 1218
Bme18I GGWCC 4 cut(s) 652, 1121, 1127, 1332
BmeRI GACNNNNNGTC 1 cut(s) 498
BmeT110I CYCGRG 1 cut(s) 205
BmgT120I GGNCC 7 cut(s) 43, 282, 652, 1121, 1127, 1258, 1332
BmiI GGNNCC 1 cut(s) 1260
BmrFI CCNGG 5 cut(s) 206, 207, 329, 1125, 1218
BmsI GCATC 5 cut(s) 79, 208, 1408, 1501, 1594
BoxI GACNNNNGTC 1 cut(s) 561
BpiI GAAGAC 1 cut(s) 458
BpuEI CTTGAG 1 cut(s) 755
BpuMI CCSGG 2 cut(s) 206, 207
BsaJI CCNNGG 2 cut(s) 205, 897
Bsc4I CCNNNNNNNGG 6 cut(s) 310, 350, 351, 391, 661, 982
Bse1I ACTGG 1 cut(s) 1130
Bse3DI GCAATG 2 cut(s) 183, 1479
BseBI CCWGG 3 cut(s) 329, 1125, 1218
BseDI CCNNGG 2 cut(s) 205, 897
BseGI GGATG 5 cut(s) 100, 362, 640, 1063, 1423
BseLI CCNNNNNNNGG 6 cut(s) 310, 350, 351, 391, 661, 982
BseMI GCAATG 2 cut(s) 183, 1479
BseMII CTCAG 1 cut(s) 1163
BseNI ACTGG 1 cut(s) 1130
BseRI GAGGAG 1 cut(s) 836
BseXI GCAGC 4 cut(s) 898, 1333, 1385, 1489
BsgI GTGCAG 2 cut(s) 485, 1590
BshFI GGCC 5 cut(s) 45, 284, 1009, 1062, 1259
BsiHKCI CYCGRG 1 cut(s) 205
BsiSI CCGG 1 cut(s) 206
BslFI GGGAC 3 cut(s) 413, 614, 1612
BslI CCNNNNNNNGG 6 cut(s) 310, 350, 351, 391, 661, 982
BsmAI GTCTC 3 cut(s) 248, 1168, 1552
BsmFI GGGAC 3 cut(s) 413, 614, 1612
BsmI GAATGC 2 cut(s) 575, 693
BsnI GGCC 5 cut(s) 45, 284, 1009, 1062, 1259
BsoBI CYCGRG 1 cut(s) 205
Bsp1407I TGTACA 1 cut(s) 431
Bsp143I GATC 1 cut(s) 1564
BspACI CCGC 6 cut(s) 92, 221, 573, 1119, 1296, 1433
BspANI GGCC 5 cut(s) 45, 284, 1009, 1062, 1259
BspCNI CTCAG 1 cut(s) 1164
BspHI TCATGA 1 cut(s) 565
BspLI GGNNCC 1 cut(s) 1260
BspMAI CTGCAG 1 cut(s) 923
BspMI ACCTGC 1 cut(s) 551
BspQI GCTCTTC 1 cut(s) 524
BsrBI CCGCTC 1 cut(s) 1433
BsrDI GCAATG 2 cut(s) 183, 1479
BsrGI TGTACA 1 cut(s) 431
BsrI ACTGG 1 cut(s) 1130
BssECI CCNNGG 2 cut(s) 205, 897
BssMI GATC 1 cut(s) 1564
Bst2UI CCWGG 3 cut(s) 329, 1125, 1218
Bst4CI ACNGT 5 cut(s) 17, 73, 517, 898, 1350
Bst6I CTCTTC 3 cut(s) 136, 524, 539
BstAUI TGTACA 1 cut(s) 431
BstDEI CTNAG 2 cut(s) 789, 1172
BstDSI CCRYGG 1 cut(s) 897
BstENI CCTNNNNNAGG 3 cut(s) 308, 389, 980
BstF5I GGATG 5 cut(s) 100, 362, 640, 1063, 1423
BstKTI GATC 1 cut(s) 1567
BstMAI GTCTC 3 cut(s) 248, 1168, 1552
BstMBI GATC 1 cut(s) 1564
BstMWI GCNNNNNNNGC 2 cut(s) 182, 290
BstNI CCWGG 3 cut(s) 329, 1125, 1218
BstNSI RCATGY 1 cut(s) 1321
BstPAI GACNNNNGTC 1 cut(s) 561
BstSCI CCNGG 5 cut(s) 204, 205, 327, 1123, 1216
BstSFI CTRYAG 2 cut(s) 919, 1136
BstV1I GCAGC 4 cut(s) 898, 1333, 1385, 1489
BstV2I GAAGAC 1 cut(s) 458
BstXI CCANNNNNNTGG 2 cut(s) 703, 1384
BsuRI GGCC 5 cut(s) 45, 284, 1009, 1062, 1259
BtgI CCRYGG 1 cut(s) 897
BtgZI GCGATG 1 cut(s) 102
BtsCI GGATG 5 cut(s) 100, 362, 640, 1063, 1423
BtsI GCAGTG 1 cut(s) 928
BtsIMutI CAGTG 1 cut(s) 928
BveI ACCTGC 1 cut(s) 551
CciI TCATGA 1 cut(s) 565
Cfr13I GGNCC 7 cut(s) 43, 282, 652, 1121, 1127, 1258, 1332
Cfr9I CCCGGG 1 cut(s) 205
CpoI CGGWCCG 1 cut(s) 1332
CseI GACGC 1 cut(s) 566
Csp6I GTAC 4 cut(s) 432, 973, 1133, 1351
CspI CGGWCCG 1 cut(s) 1332
CviQI GTAC 4 cut(s) 432, 973, 1133, 1351
DdeI CTNAG 2 cut(s) 789, 1172
DpnI GATC 1 cut(s) 1566
DpnII GATC 1 cut(s) 1564
DrdI GACNNNNNNGTC 1 cut(s) 1298
DriI GACNNNNNGTC 1 cut(s) 498
DseDI GACNNNNNNGTC 1 cut(s) 1298
EaeI YGGCCR 1 cut(s) 1060
Eam1104I CTCTTC 3 cut(s) 136, 524, 539
Eam1105I GACNNNNNGTC 1 cut(s) 498
EarI CTCTTC 3 cut(s) 136, 524, 539
Eco47I GGWCC 4 cut(s) 652, 1121, 1127, 1332
Eco57I CTGAAG 1 cut(s) 1125
Eco88I CYCGRG 1 cut(s) 205
EcoNI CCTNNNNNAGG 3 cut(s) 308, 389, 980
EcoO109I RGGNCCY 1 cut(s) 1258
EcoRII CCWGG 3 cut(s) 327, 1123, 1216
FalI AAGNNNNNCTT 2 cut(s) 874, 906
FaqI GGGAC 3 cut(s) 413, 614, 1612
FauI CCCGC 1 cut(s) 566
FauNDI CATATG 1 cut(s) 1515
FblI GTMKAC 1 cut(s) 1302
Fnu4HI GCNGC 5 cut(s) 887, 1322, 1374, 1434, 1478
FokI GGATG 5 cut(s) 107, 369, 647, 1070, 1430
Fsp4HI GCNGC 5 cut(s) 887, 1322, 1374, 1434, 1478
FspBI CTAG 1 cut(s) 35
GluI GCNGC 5 cut(s) 887, 1322, 1374, 1434, 1478
HaeIII GGCC 5 cut(s) 45, 284, 1009, 1062, 1259
HapII CCGG 1 cut(s) 206
HgaI GACGC 1 cut(s) 566
HincII GTYRAC 5 cut(s) 120, 226, 492, 853, 1084
HindII GTYRAC 5 cut(s) 120, 226, 492, 853, 1084
HinfI GANTC 5 cut(s) 585, 595, 1069, 1355, 1412
HpaI GTTAAC 1 cut(s) 120
HpaII CCGG 1 cut(s) 206
HphI GGTGA 2 cut(s) 317, 964
Hpy166II GTNNAC 9 cut(s) 120, 151, 226, 434, 478, 492, 853, 1084, 1303
Hpy188I TCNGA 5 cut(s) 590, 1332, 1417, 1497, 1590
Hpy188III TCNNGA 5 cut(s) 163, 566, 582, 599, 1146
Hpy8I GTNNAC 9 cut(s) 120, 151, 226, 434, 478, 492, 853, 1084, 1303
Hpy99I CGWCG 2 cut(s) 17, 350
HpyAV CCTTC 8 cut(s) 17, 329, 643, 900, 980, 1037, 1499, 1526
HpyCH4III ACNGT 5 cut(s) 17, 73, 517, 898, 1350
HpyCH4IV ACGT 4 cut(s) 228, 322, 402, 1305
HpyF10VI GCNNNNNNNGC 2 cut(s) 182, 290
HpyF3I CTNAG 2 cut(s) 789, 1172
HpySE526I ACGT 4 cut(s) 228, 322, 402, 1305
KspAI GTTAAC 1 cut(s) 120
Kzo9I GATC 1 cut(s) 1564
LguI GCTCTTC 1 cut(s) 524
LmnI GCTCC 1 cut(s) 1430
Lsp1109I GCAGC 4 cut(s) 898, 1333, 1385, 1489
LweI GCATC 5 cut(s) 79, 208, 1408, 1501, 1594
MaeI CTAG 1 cut(s) 35
MaeII ACGT 4 cut(s) 228, 322, 402, 1305
MaeIII GTNAC 4 cut(s) 323, 500, 1090, 1448
MalI GATC 1 cut(s) 1566
MbiI CCGCTC 1 cut(s) 1433
MboI GATC 1 cut(s) 1564
MboII GAAGA 9 cut(s) 111, 153, 362, 463, 541, 556, 1250, 1532, 1541
MfeI CAATTG 3 cut(s) 108, 997, 1248
MlsI TGGCCA 1 cut(s) 1062
MluNI TGGCCA 1 cut(s) 1062
MlyI GAGTC 2 cut(s) 1349, 1421
MmeI TCCRAC 4 cut(s) 504, 612, 786, 1395
Mox20I TGGCCA 1 cut(s) 1062
MscI TGGCCA 1 cut(s) 1062
MseI TTAA 3 cut(s) 119, 816, 1394
MslI CAYNNNNRTG 3 cut(s) 15, 1497, 1590
Msp20I TGGCCA 1 cut(s) 1062
MspI CCGG 1 cut(s) 206
MspR9I CCNGG 5 cut(s) 206, 207, 329, 1125, 1218
MunI CAATTG 3 cut(s) 108, 997, 1248
Mva1269I GAATGC 2 cut(s) 575, 693
MvaI CCWGG 3 cut(s) 329, 1125, 1218
MwoI GCNNNNNNNGC 2 cut(s) 182, 290
NciI CCSGG 2 cut(s) 206, 207
NdeI CATATG 1 cut(s) 1515
NdeII GATC 1 cut(s) 1564
NlaIV GGNNCC 1 cut(s) 1260
NmuCI GTSAC 4 cut(s) 323, 500, 1090, 1448
NspI RCATGY 1 cut(s) 1321
OliI CACNNNNGTG 1 cut(s) 15
PagI TCATGA 1 cut(s) 565
PciSI GCTCTTC 1 cut(s) 524
PctI GAATGC 2 cut(s) 575, 693
PfeI GAWTC 3 cut(s) 585, 595, 1069
PflFI GACNNNGTC 1 cut(s) 1088
PkrI GCNGC 5 cut(s) 888, 1323, 1375, 1435, 1479
PleI GAGTC 2 cut(s) 1349, 1420
PpsI GAGTC 2 cut(s) 1349, 1420
PshAI GACNNNNGTC 1 cut(s) 561
Psp6I CCWGG 3 cut(s) 327, 1123, 1216
PspGI CCWGG 3 cut(s) 327, 1123, 1216
PspN4I GGNNCC 1 cut(s) 1260
PspPI GGNCC 7 cut(s) 43, 282, 652, 1121, 1127, 1258, 1332
PstI CTGCAG 1 cut(s) 923
PsyI GACNNNGTC 1 cut(s) 1088
RsaI GTAC 4 cut(s) 433, 974, 1134, 1352
RsaNI GTAC 4 cut(s) 432, 973, 1133, 1351
RseI CAYNNNNRTG 3 cut(s) 15, 1497, 1590
Rsr2I CGGWCCG 1 cut(s) 1332
RsrII CGGWCCG 1 cut(s) 1332
SapI GCTCTTC 1 cut(s) 524
SaqAI TTAA 3 cut(s) 119, 816, 1394
SatI GCNGC 5 cut(s) 887, 1322, 1374, 1434, 1478
Sau3AI GATC 1 cut(s) 1564
Sau96I GGNCC 7 cut(s) 43, 282, 652, 1121, 1127, 1258, 1332
ScaI AGTACT 1 cut(s) 1134
SchI GAGTC 2 cut(s) 1349, 1421
ScrFI CCNGG 5 cut(s) 206, 207, 329, 1125, 1218
SfaNI GCATC 5 cut(s) 79, 208, 1408, 1501, 1594
SfcI CTRYAG 2 cut(s) 919, 1136
SinI GGWCC 4 cut(s) 652, 1121, 1127, 1332
SmaI CCCGGG 1 cut(s) 207
SmiMI CAYNNNNRTG 3 cut(s) 15, 1497, 1590
SmlI CTYRAG 1 cut(s) 734
SmoI CTYRAG 1 cut(s) 734
SsiI CCGC 6 cut(s) 92, 221, 573, 1119, 1296, 1433
SspMI CTAG 1 cut(s) 35
StyD4I CCNGG 5 cut(s) 204, 205, 327, 1123, 1216
TaaI ACNGT 5 cut(s) 17, 73, 517, 898, 1350
TaiI ACGT 4 cut(s) 231, 325, 405, 1308
TaqI TCGA 4 cut(s) 644, 685, 1145, 1358
TaqII GACCGA 2 cut(s) 669, 1349
TatI WGTACW 2 cut(s) 431, 1132
TauI GCSGC 1 cut(s) 1436
TfiI GAWTC 3 cut(s) 585, 595, 1069
Tru1I TTAA 3 cut(s) 119, 816, 1394
Tru9I TTAA 3 cut(s) 119, 816, 1394
TscAI CASTG 1 cut(s) 928
TseFI GTSAC 4 cut(s) 323, 500, 1090, 1448
TseI GCWGC 4 cut(s) 886, 1321, 1373, 1477
Tsp45I GTSAC 4 cut(s) 323, 500, 1090, 1448
TspDTI ATGAA 5 cut(s) 582, 662, 683, 854, 1056
TspMI CCCGGG 1 cut(s) 205
TspRI CASTG 1 cut(s) 928
Tth111I GACNNNGTC 1 cut(s) 1088
VpaK11BI GGWCC 4 cut(s) 652, 1121, 1127, 1332
XagI CCTNNNNNAGG 3 cut(s) 308, 389, 980
XapI RAATTY 4 cut(s) 698, 773, 827, 1264
XceI RCATGY 1 cut(s) 1321
XmaI CCCGGG 1 cut(s) 205
XmiI GTMKAC 1 cut(s) 1302
XspI CTAG 1 cut(s) 35
ZrmI AGTACT 1 cut(s) 1134
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.