Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

OG0000124

Physical Location & Seq

Genomic Coordinates Forward (+)

52302845 .. 52304486

Gene Structure 1642 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG354300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1089 bp

ATGGCCGATTTCAGTACAATGTTTGACCCATGCTTCATTGTTGTTGTTCGGTACCCGGGACAGAACGTCGAAAAGACGAAAATTCCACCCCTGTTCAGTAGGCATCACTTGGAGGACGATGACACTGACGTCGCTCGACTGGTCTTGGATGGATCACGGAAGTGCTCATACTATGTCGAAATTATGCGACAAGGGCGGGACCATTGGCTGGGTTCTGGTTGGGAGGGGTTTTTGGACAATGTCCGAGCCGGTCAAGGTCGAATGGTGCTGCTACTCCAGTACAGACGCGGCATGAAGTTCCTTGTGCGCAGGTACGATGTCAACGGGGCTTTGATGTACACTTCTCCCAAACCCCGATTTGGTTGCCCACCTCCCAAATCACCGACTATTTCAAGGGTATCCGACGGCTTCGTTTCGGACGTTTGGGATGCCTCTGTCACTGTGCCTGTTGTACCAAGAGGTGTCATGCATGATAGACTGATTGCGGATGGGGCCCCTGCTCGGTGTGAACTCCAATGGGAGACGGTGCCTCCATGCCTCCAGCAGGTCGACATTACAGGAGGACGTAGGGAGCTGCGGTTCGCTTGTGCGTGGGAACGATTTCACTTCGAGAATCGGTTGGACAAACGTCGGTGCTGTGTGTTCACCTACCTGGGAAATCTACGTTTCTCCGTTCTTGTGTTCAACACTGTTCGAGGTAACCTGTGCACGACGCCGCTGCAATACACCCAAGCTCCAGCTGTGCCCCCACATTTTAGGGGTAATGAGCACATGCAGGGTAATGAGGAGCCTGAGGAGGACCATATGGATAGGGATGGGGCACAGGGGGAAGAAGACGAGGAACGGATCCCGGATCAGGATGTTGAAGATGAAGATGAGGAACCTCATATGGAACGGGTGAACCCAGGATGGCGTACTTTCAGAGGAGTAGCTGTGAAGATAAAGGTCCAGAAATCAGATGGACGTGTCTGGAGGATGAAAGCCGTCCCATCCAATACCACTCACTACCTAAGTGCTGGGTACTCCAAATTCAGGGAGGCTCTGAAACTGCCCATAGGATCCACAATCGAGCTCCATGTGGTTGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016553 GO:0016554 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR

Protein Analysis

362

Amino Acids

41.53

Weight (kDa)

6.28

Isoelectric Point (pI)

43.8

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000124)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g10992 FvH4_2g25150 FvH4_2g27910 FvH4_2g27931 FvH4_4g09443 FvH4_4g09490 FvH4_4g15990 FvH4_4g15991 FvH4_6g07180 FvH4_6g40320 FvH4_7g10222 FvH4_7g10251
rosa_chinensis	RchiOBHm_Chr2g0155611
rosa_laevigata	RLG00000009253 RLG00000009254 RLG00000011848 RLG00000017301 RLG00000017302 RLG00000034909
rosa_multiflora	Rmu_co8063658.1_g000001 Rmu_co8240443.1_g000001 Rmu_co8264451.1_g000001 Rmu_co8381937.1_g000001 Rmu_co8419903.1_g000001 Rmu_co8513405.1_g000002 Rmu_co8522915.1_g000001 Rmu_co8522915.1_g000004 Rmu_sc0000279.1_g000024 Rmu_sc0000279.1_g000048 Rmu_sc0000642.1_g000017 Rmu_sc0002045.1_g000015 Rmu_sc0002045.1_g000018 Rmu_sc0002045.1_g000023 Rmu_sc0002045.1_g000028 Rmu_sc0003047.1_g000008 Rmu_sc0003179.1_g000019 Rmu_sc0003179.1_g000020 Rmu_sc0003179.1_g000022 Rmu_sc0003179.1_g000023 Rmu_sc0003422.1_g000011 Rmu_sc0004999.1_g000014 Rmu_sc0005712.1_g000018 Rmu_sc0005712.1_g000023 Rmu_sc0006198.1_g000019 Rmu_sc0006373.1_g000005 Rmu_sc0006514.1_g000028 Rmu_sc0006514.1_g000031 Rmu_sc0007367.1_g000010 Rmu_sc0011475.1_g000002 Rmu_sc0025304.1_g000001 Rmu_ssc0000161.1_g000030 Rmu_ssc0000161.1_g000032 Rmu_ssc0000387.1_g000018
rosa_roxburghii	Rroxscaffold_1G00031090 Rroxscaffold_1G00032770 Rroxscaffold_1G00068950 Rroxscaffold_1G00069000 Rroxscaffold_1G00069010 Rroxscaffold_2G00129060 Rroxscaffold_2G00129100 Rroxscaffold_4G00309310 Rroxscaffold_4G00309320 Rroxscaffold_5G00350620 Rroxscaffold_5G00350630 Rroxscaffold_7G00162650 Rroxscaffold_7G00162660 Rroxscaffold_7G00162710
rosa_rugosa	Rorug02G0564700 Rorug02G0564700 Rorug03G0343100 Rorug04G0189700 Rorug05G0102800 Rorug05G0102900 Rorug05G0103000 Rorug05G0106500 Rorug05G0106600 Rorug05G0106700 Rorug05G0252800 Rorug07G0182100 Rorug07G0283500 Rorug07G0283600
rosa_samantha	Rh1AG004000 Rh1AG004100 Rh1AG004200 Rh1AG004400 Rh1AG004500 Rh1AG004600 Rh1AG004800 Rh1AG004900 Rh1AG005300 Rh1AG007000 Rh1AG115000 Rh1CG049400 Rh1CG055400 Rh1CG111000 Rh1DG053600 Rh1DG053700 Rh1DG059300 Rh1DG119700 Rh1DG177100 Rh1DG177200 Rh2AG353800 Rh2AG354000 Rh2AG354100 Rh2AG354300 Rh2AG354400 Rh2AG354500 Rh2AG354600 Rh2AG354700 Rh2AG642300 Rh2AG642400 Rh2AG642500 Rh2BG336500 Rh2BG336600 Rh2BG336700 Rh2BG336800 Rh2BG336900 Rh2CG299900 Rh2CG300000 Rh2CG300100 Rh2DG337000 Rh2DG337100 Rh3AG246600 Rh3BG121900 Rh3BG122300 Rh3BG122600 Rh3BG122700 Rh3DG304800 Rh3DG304900 Rh4AG148800 Rh4AG249000 Rh4AG249100 Rh4AG249200 Rh4BG182700 Rh4BG182800 Rh4BG182900 Rh4BG254400 Rh4BG254500 Rh4BG254600 Rh4CG155500 Rh4CG155700 Rh4DG057900 Rh4DG058000 Rh4DG058100 Rh4DG058200 Rh4DG129100 Rh5AG364500 Rh5AG364600 Rh5AG364800 Rh5AG365300 Rh5CG363700 Rh5CG497600 Rh5DG239500 Rh5DG239600 Rh6AG173500 Rh6AG175400 Rh6BG075900 Rh6BG076300 Rh6BG076400 Rh6BG076500 Rh6BG076600 Rh6CG151000 Rh6CG151200 Rh6CG151300 Rh6CG151400 Rh6CG205200 Rh6CG205300 Rh6CG419700 Rh6CG419900 Rh6CG420100 Rh6DG498700 Rh6DG498800 Rh7AG329000 Rh7AG329100 Rh7AG329300 Rh7AG329400 Rh7AG353000 Rh7AG353100 Rh7AG353300 Rh7AG353400 Rh7AG353500 Rh7CG346400 Rh7CG346500 Rh7CG346700 Rh7CG370800 Rh7CG370900 Rh7CG371000 Rh7CG371100 Rh7DG325000 Rh7DG325100 Rh7DG325200 Rh7DG325300 Rh7DG353100 Rh7DG353200 Rh7DG353300 Rh7DG363500 Rh7DG364000
rosa_wichuraiana	Rw0G002290 Rw0G012780 Rw1G000260 Rw1G000270 Rw1G010400 Rw1G010410 Rw1G010420 Rw1G010430 Rw1G010440 Rw2G003210 Rw2G003220 Rw4G010970 Rw5G048520 Rw6G013320 Rw6G013470 Rw6G014940 Rw6G016570 Rw6G016590 Rw6G016600 Rw6G016610 Rw6G016620 Rw6G035450 Rw7G027760 Rw7G030460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	128
AatII	GACGTC	1 cut(s)	132
Acc16I	TGCGCA	1 cut(s)	308
Acc36I	ACCTGC	2 cut(s)	300, 535
Acc65I	GGTACC	1 cut(s)	51
AccB1I	GGYRCC	2 cut(s)	51, 526
AccB7I	CCANNNNNTGG	1 cut(s)	208
AccI	GTMKAC	1 cut(s)	549
AccII	CGCG	1 cut(s)	288
AciI	CCGC	5 cut(s)	196, 288, 485, 577, 716
AclWI	GGATC	6 cut(s)	160, 841, 854, 861, 1053, 1066
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	2 cut(s)	81, 1028
AcyI	GRCGYC	2 cut(s)	129, 713
AfaI	GTAC	8 cut(s)	16, 53, 281, 314, 338, 453, 916, 1022
AfiI	CCNNNNNNNGG	6 cut(s)	208, 359, 501, 544, 856, 1032
AflIII	ACRYGT	1 cut(s)	964
AgsI	TTSAA	3 cut(s)	393, 685, 866
AhdI	GACNNNNNGTC	1 cut(s)	65
AjiI	CACGTC	1 cut(s)	965
AjnI	CCWGG	2 cut(s)	651, 904
AleI	CACNNNNGTG	1 cut(s)	160
AloI	GAACNNNNNNTCC	2 cut(s)	563, 595
AluBI	AGCT	5 cut(s)	574, 734, 740, 932, 1072
AluI	AGCT	5 cut(s)	574, 734, 740, 932, 1072
Alw21I	GWGCWC	4 cut(s)	167, 710, 771, 1074
Alw26I	GTCTC	1 cut(s)	515
Alw44I	GTGCAC	1 cut(s)	706
AlwI	GGATC	6 cut(s)	160, 841, 854, 861, 1053, 1066
Ama87I	CYCGRG	1 cut(s)	55
AoxI	GGCC	2 cut(s)	3, 492
ApaI	GGGCCC	1 cut(s)	496
ApaLI	GTGCAC	1 cut(s)	706
ApeKI	GCWGC	3 cut(s)	268, 574, 718
ApoI	RAATTY	2 cut(s)	81, 1028
Asp700I	GAANNNNTTC	1 cut(s)	600
Asp718I	GGTACC	1 cut(s)	51
AspLEI	GCGC	1 cut(s)	309
AspS9I	GGNCC	5 cut(s)	199, 492, 493, 799, 946
AsuC2I	CCSGG	3 cut(s)	56, 57, 851
AsuHPI	GGTGA	3 cut(s)	372, 637, 910
AvaI	CYCGRG	1 cut(s)	55
AvaII	GGWCC	3 cut(s)	199, 799, 946
AxyI	CCTNAGG	1 cut(s)	792
BaeGI	GKGCMC	4 cut(s)	496, 710, 747, 823
BamHI	GGATCC	2 cut(s)	846, 1058
BanI	GGYRCC	2 cut(s)	51, 526
BanII	GRGCYC	2 cut(s)	496, 1074
BarI	GAAGNNNNNNTAC	2 cut(s)	152, 184
BbsI	GAAGAC	1 cut(s)	840
Bbv12I	GWGCWC	4 cut(s)	167, 710, 771, 1074
BbvI	GCAGC	3 cut(s)	255, 561, 705
BccI	CCATC	6 cut(s)	143, 482, 809, 903, 953, 997
BceAI	ACGGC	2 cut(s)	421, 968
BcgI	CGANNNNNNTGC	4 cut(s)	345, 379, 700, 734
BciT130I	CCWGG	2 cut(s)	653, 906
BciVI	GTATCC	1 cut(s)	409
BcnI	CCSGG	3 cut(s)	56, 57, 851
BcoDI	GTCTC	1 cut(s)	515
BfuAI	ACCTGC	2 cut(s)	300, 535
BfuI	GTATCC	1 cut(s)	409
BisI	GCNGC	5 cut(s)	269, 289, 575, 716, 719
BlsI	GCNGC	5 cut(s)	270, 290, 576, 717, 720
Bme1390I	CCNGG	5 cut(s)	56, 57, 653, 851, 906
Bme18I	GGWCC	3 cut(s)	199, 799, 946
BmeRI	GACNNNNNGTC	1 cut(s)	65
BmeT110I	CYCGRG	1 cut(s)	55
BmgBI	CACGTC	1 cut(s)	965
BmgT120I	GGNCC	5 cut(s)	199, 492, 493, 799, 946
BmrFI	CCNGG	5 cut(s)	56, 57, 653, 851, 906
BmsI	GCATC	2 cut(s)	112, 418
BoxI	GACNNNNGTC	1 cut(s)	627
BpiI	GAAGAC	1 cut(s)	840
BpmI	CTGGAG	4 cut(s)	260, 524, 720, 991
BpuMI	CCSGG	3 cut(s)	56, 57, 851
BsaHI	GRCGYC	2 cut(s)	129, 713
BsaJI	CCNNGG	3 cut(s)	55, 652, 904
BsaXI	ACNNNNNCTCC	8 cut(s)	514, 544, 563, 593, 718, 748, 918, 948
Bsc4I	CCNNNNNNNGG	6 cut(s)	208, 359, 501, 544, 856, 1032
Bse118I	RCCGGY	1 cut(s)	248
Bse1I	ACTGG	2 cut(s)	144, 277
Bse21I	CCTNAGG	1 cut(s)	792
BseBI	CCWGG	2 cut(s)	653, 906
BseDI	CCNNGG	3 cut(s)	55, 652, 904
BseGI	GGATG	8 cut(s)	154, 433, 493, 820, 865, 914, 981, 989
BseLI	CCNNNNNNNGG	6 cut(s)	208, 359, 501, 544, 856, 1032
BseMII	CTCAG	1 cut(s)	783
BseNI	ACTGG	2 cut(s)	144, 277
BseRI	GAGGAG	3 cut(s)	800, 809, 939
BseSI	GKGCMC	4 cut(s)	496, 710, 747, 823
BseXI	GCAGC	3 cut(s)	255, 561, 705
BseYI	CCCAGC	2 cut(s)	208, 1016
Bsh1236I	CGCG	1 cut(s)	288
BshFI	GGCC	2 cut(s)	5, 494
BshNI	GGYRCC	2 cut(s)	51, 526
BsiHKAI	GWGCWC	4 cut(s)	167, 710, 771, 1074
BsiHKCI	CYCGRG	1 cut(s)	55
BsiSI	CCGG	3 cut(s)	56, 249, 851
BslFI	GGGAC	3 cut(s)	72, 212, 971
BslI	CCNNNNNNNGG	6 cut(s)	208, 359, 501, 544, 856, 1032
BsmAI	GTCTC	1 cut(s)	515
BsmBI	CGTCTC	1 cut(s)	515
BsmFI	GGGAC	3 cut(s)	72, 212, 971
BsnI	GGCC	2 cut(s)	5, 494
BsoBI	CYCGRG	1 cut(s)	55
Bsp120I	GGGCCC	1 cut(s)	492
Bsp1286I	GDGCHC	7 cut(s)	167, 496, 710, 747, 771, 823, 1074
Bsp1407I	TGTACA	1 cut(s)	336
Bsp143I	GATC	4 cut(s)	152, 846, 853, 1058
BspACI	CCGC	5 cut(s)	196, 288, 485, 577, 716
BspANI	GGCC	2 cut(s)	5, 494
BspCNI	CTCAG	1 cut(s)	784
BspFNI	CGCG	1 cut(s)	288
BspMI	ACCTGC	2 cut(s)	300, 535
BspPI	GGATC	6 cut(s)	160, 841, 854, 861, 1053, 1066
BspT107I	GGYRCC	2 cut(s)	51, 526
BsrFI	RCCGGY	1 cut(s)	248
BsrGI	TGTACA	1 cut(s)	336
BsrI	ACTGG	2 cut(s)	144, 277
BssAI	RCCGGY	1 cut(s)	248
BssECI	CCNNGG	3 cut(s)	55, 652, 904
BssMI	GATC	4 cut(s)	152, 846, 853, 1058
BssNI	GRCGYC	2 cut(s)	129, 713
Bst2UI	CCWGG	2 cut(s)	653, 906
Bst4CI	ACNGT	3 cut(s)	442, 526, 691
BstACI	GRCGYC	2 cut(s)	129, 713
BstAUI	TGTACA	1 cut(s)	336
BstDEI	CTNAG	2 cut(s)	792, 1010
BstEII	GGTNACC	1 cut(s)	698
BstENI	CCTNNNNNAGG	1 cut(s)	542
BstF5I	GGATG	8 cut(s)	154, 433, 493, 820, 865, 914, 981, 989
BstFNI	CGCG	1 cut(s)	288
BstHHI	GCGC	1 cut(s)	309
BstKTI	GATC	4 cut(s)	155, 849, 856, 1061
BstMAI	GTCTC	1 cut(s)	515
BstMBI	GATC	4 cut(s)	152, 846, 853, 1058
BstMWI	GCNNNNNNNGC	2 cut(s)	193, 491
BstNI	CCWGG	2 cut(s)	653, 906
BstNSI	RCATGY	1 cut(s)	775
BstPAI	GACNNNNGTC	1 cut(s)	627
BstPI	GGTNACC	1 cut(s)	698
BstSCI	CCNGG	5 cut(s)	54, 55, 651, 849, 904
BstSLI	GKGCMC	4 cut(s)	496, 710, 747, 823
BstUI	CGCG	1 cut(s)	288
BstV1I	GCAGC	3 cut(s)	255, 561, 705
BstV2I	GAAGAC	1 cut(s)	840
BstX2I	RGATCY	2 cut(s)	846, 1058
BstYI	RGATCY	2 cut(s)	846, 1058
Bsu36I	CCTNAGG	1 cut(s)	792
BsuI	GTATCC	1 cut(s)	409
BsuRI	GGCC	2 cut(s)	5, 494
BtrI	CACGTC	1 cut(s)	965
BtsCI	GGATG	8 cut(s)	154, 433, 493, 820, 865, 914, 981, 989
BtsIMutI	CAGTG	3 cut(s)	123, 438, 687
BveI	ACCTGC	2 cut(s)	300, 535
CfoI	GCGC	1 cut(s)	309
Cfr10I	RCCGGY	1 cut(s)	248
Cfr13I	GGNCC	5 cut(s)	199, 492, 493, 799, 946
Cfr9I	CCCGGG	1 cut(s)	55
CseI	GACGC	2 cut(s)	294, 721
Csp6I	GTAC	8 cut(s)	15, 52, 280, 313, 337, 452, 915, 1021
CviAII	CATG	7 cut(s)	30, 292, 466, 470, 534, 772, 1076
CviQI	GTAC	8 cut(s)	15, 52, 280, 313, 337, 452, 915, 1021
DdeI	CTNAG	2 cut(s)	792, 1010
DpnI	GATC	4 cut(s)	154, 848, 855, 1060
DpnII	GATC	4 cut(s)	152, 846, 853, 1058
DrdI	GACNNNNNNGTC	1 cut(s)	128
DriI	GACNNNNNGTC	1 cut(s)	65
DseDI	GACNNNNNNGTC	1 cut(s)	128
EaeI	YGGCCR	1 cut(s)	3
Eam1105I	GACNNNNNGTC	1 cut(s)	65
Ecl136II	GAGCTC	1 cut(s)	1072
Eco24I	GRGCYC	2 cut(s)	496, 1074
Eco47I	GGWCC	3 cut(s)	199, 799, 946
Eco53kI	GAGCTC	1 cut(s)	1072
Eco81I	CCTNAGG	1 cut(s)	792
Eco88I	CYCGRG	1 cut(s)	55
Eco91I	GGTNACC	1 cut(s)	698
EcoICRI	GAGCTC	1 cut(s)	1072
EcoNI	CCTNNNNNAGG	1 cut(s)	542
EcoO109I	RGGNCCY	2 cut(s)	492, 493
EcoO65I	GGTNACC	1 cut(s)	698
EcoRII	CCWGG	2 cut(s)	651, 904
EcoT22I	ATGCAT	1 cut(s)	471
EcoT38I	GRGCYC	2 cut(s)	496, 1074
Esp3I	CGTCTC	1 cut(s)	515
FaeI	CATG	7 cut(s)	33, 295, 469, 473, 537, 775, 1079
FaqI	GGGAC	3 cut(s)	72, 212, 971
FatI	CATG	7 cut(s)	29, 291, 465, 469, 533, 771, 1075
FauI	CCCGC	1 cut(s)	189
FauNDI	CATATG	2 cut(s)	804, 888
FblI	GTMKAC	1 cut(s)	549
Fnu4HI	GCNGC	5 cut(s)	269, 289, 575, 716, 719
FokI	GGATG	8 cut(s)	161, 440, 500, 827, 872, 921, 976, 988
FriOI	GRGCYC	2 cut(s)	496, 1074
Fsp4HI	GCNGC	5 cut(s)	269, 289, 575, 716, 719
FspI	TGCGCA	1 cut(s)	308
GlaI	GCGC	1 cut(s)	308
GluI	GCNGC	5 cut(s)	269, 289, 575, 716, 719
GsaI	CCCAGC	2 cut(s)	212, 1020
GsuI	CTGGAG	4 cut(s)	260, 524, 720, 991
HaeIII	GGCC	2 cut(s)	5, 494
HapII	CCGG	3 cut(s)	56, 249, 851
HgaI	GACGC	2 cut(s)	294, 721
HhaI	GCGC	1 cut(s)	309
Hin1I	GRCGYC	2 cut(s)	129, 713
Hin1II	CATG	7 cut(s)	33, 295, 469, 473, 537, 775, 1079
Hin6I	GCGC	1 cut(s)	307
HinP1I	GCGC	1 cut(s)	307
HincII	GTYRAC	3 cut(s)	322, 550, 1084
HindII	GTYRAC	3 cut(s)	322, 550, 1084
HinfI	GANTC	1 cut(s)	613
HpaII	CCGG	3 cut(s)	56, 249, 851
HphI	GGTGA	3 cut(s)	372, 637, 910
Hpy166II	GTNNAC	8 cut(s)	322, 339, 509, 550, 645, 708, 901, 1084
Hpy188I	TCNGA	6 cut(s)	245, 403, 418, 923, 958, 1044
Hpy188III	TCNNGA	4 cut(s)	610, 857, 949, 970
Hpy8I	GTNNAC	8 cut(s)	322, 339, 509, 550, 645, 708, 901, 1084
Hpy99I	CGWCG	5 cut(s)	71, 134, 407, 633, 715
HpyCH4III	ACNGT	3 cut(s)	442, 526, 691
HpyCH4IV	ACGT	7 cut(s)	66, 129, 420, 565, 628, 664, 964
HpyCH4V	TGCA	4 cut(s)	469, 708, 721, 775
HpyF10VI	GCNNNNNNNGC	2 cut(s)	193, 491
HpyF3I	CTNAG	2 cut(s)	792, 1010
HpySE526I	ACGT	7 cut(s)	66, 129, 420, 565, 628, 664, 964
Hsp92I	GRCGYC	2 cut(s)	129, 713
Hsp92II	CATG	7 cut(s)	33, 295, 469, 473, 537, 775, 1079
HspAI	GCGC	1 cut(s)	307
KpnI	GGTACC	1 cut(s)	55
Kzo9I	GATC	4 cut(s)	152, 846, 853, 1058
LmnI	GCTCC	4 cut(s)	571, 739, 787, 1077
Lsp1109I	GCAGC	3 cut(s)	255, 561, 705
LweI	GCATC	2 cut(s)	112, 418
MaeII	ACGT	7 cut(s)	66, 129, 420, 565, 628, 664, 964
MaeIII	GTNAC	2 cut(s)	436, 698
MalI	GATC	4 cut(s)	154, 848, 855, 1060
MboI	GATC	4 cut(s)	152, 846, 853, 1058
MboII	GAAGA	5 cut(s)	842, 845, 878, 884, 949
MflI	RGATCY	2 cut(s)	846, 1058
MhlI	GDGCHC	7 cut(s)	167, 496, 710, 747, 771, 823, 1074
MluCI	AATT	3 cut(s)	81, 180, 1028
MmeI	TCCRAC	2 cut(s)	426, 600
Mph1103I	ATGCAT	1 cut(s)	471
MroXI	GAANNNNTTC	1 cut(s)	600
MslI	CAYNNNNRTG	1 cut(s)	160
MspA1I	CMGCKG	2 cut(s)	718, 740
MspI	CCGG	3 cut(s)	56, 249, 851
MspR9I	CCNGG	5 cut(s)	56, 57, 653, 851, 906
MvaI	CCWGG	2 cut(s)	653, 906
MvnI	CGCG	1 cut(s)	288
MwoI	GCNNNNNNNGC	2 cut(s)	193, 491
NciI	CCSGG	3 cut(s)	56, 57, 851
NdeI	CATATG	2 cut(s)	804, 888
NdeII	GATC	4 cut(s)	152, 846, 853, 1058
NlaIII	CATG	7 cut(s)	33, 295, 469, 473, 537, 775, 1079
NmuCI	GTSAC	1 cut(s)	436
NsbI	TGCGCA	1 cut(s)	308
NsiI	ATGCAT	1 cut(s)	471
NspI	RCATGY	1 cut(s)	775
OliI	CACNNNNGTG	1 cut(s)	160
PcsI	WCGNNNNNNNCGW	1 cut(s)	417
PdmI	GAANNNNTTC	1 cut(s)	600
PfeI	GAWTC	1 cut(s)	613
PflFI	GACNNNGTC	1 cut(s)	239
PflMI	CCANNNNNTGG	1 cut(s)	208
PfoI	TCCNGGA	1 cut(s)	849
PkrI	GCNGC	5 cut(s)	270, 290, 576, 717, 720
PshAI	GACNNNNGTC	1 cut(s)	627
Psp124BI	GAGCTC	1 cut(s)	1074
Psp6I	CCWGG	2 cut(s)	651, 904
PspEI	GGTNACC	1 cut(s)	698
PspFI	CCCAGC	2 cut(s)	208, 1016
PspGI	CCWGG	2 cut(s)	651, 904
PspOMI	GGGCCC	1 cut(s)	492
PspPI	GGNCC	5 cut(s)	199, 492, 493, 799, 946
PsuI	RGATCY	2 cut(s)	846, 1058
PsyI	GACNNNGTC	1 cut(s)	239
PvuII	CAGCTG	1 cut(s)	740
RsaI	GTAC	8 cut(s)	16, 53, 281, 314, 338, 453, 916, 1022
RsaNI	GTAC	8 cut(s)	15, 52, 280, 313, 337, 452, 915, 1021
RseI	CAYNNNNRTG	1 cut(s)	160
SacI	GAGCTC	1 cut(s)	1074
SalI	GTCGAC	1 cut(s)	548
SatI	GCNGC	5 cut(s)	269, 289, 575, 716, 719
Sau3AI	GATC	4 cut(s)	152, 846, 853, 1058
Sau96I	GGNCC	5 cut(s)	199, 492, 493, 799, 946
ScrFI	CCNGG	5 cut(s)	56, 57, 653, 851, 906
SduI	GDGCHC	7 cut(s)	167, 496, 710, 747, 771, 823, 1074
SfaNI	GCATC	2 cut(s)	112, 418
SinI	GGWCC	3 cut(s)	199, 799, 946
SmaI	CCCGGG	1 cut(s)	57
SmiMI	CAYNNNNRTG	1 cut(s)	160
Sse9I	AATT	3 cut(s)	81, 180, 1028
SsiI	CCGC	5 cut(s)	196, 288, 485, 577, 716
SstI	GAGCTC	1 cut(s)	1074
StyD4I	CCNGG	5 cut(s)	54, 55, 651, 849, 904
TaaI	ACNGT	3 cut(s)	442, 526, 691
TaiI	ACGT	7 cut(s)	69, 132, 423, 568, 631, 667, 967
TaqI	TCGA	8 cut(s)	69, 136, 177, 259, 549, 609, 694, 1068
TasI	AATT	3 cut(s)	81, 180, 1028
TatI	WGTACW	3 cut(s)	14, 279, 336
TauI	GCSGC	2 cut(s)	291, 718
TfiI	GAWTC	1 cut(s)	613
TscAI	CASTG	3 cut(s)	130, 445, 694
TseFI	GTSAC	1 cut(s)	436
TseI	GCWGC	3 cut(s)	268, 574, 718
Tsp45I	GTSAC	1 cut(s)	436
TspDTI	ATGAA	4 cut(s)	25, 308, 885, 992
TspGWI	ACGGA	3 cut(s)	172, 661, 859
TspMI	CCCGGG	1 cut(s)	55
TspRI	CASTG	3 cut(s)	130, 445, 694
Tth111I	GACNNNGTC	1 cut(s)	239
Van91I	CCANNNNNTGG	1 cut(s)	208
VneI	GTGCAC	1 cut(s)	706
VpaK11BI	GGWCC	3 cut(s)	199, 799, 946
XagI	CCTNNNNNAGG	1 cut(s)	542
XapI	RAATTY	2 cut(s)	81, 1028
XceI	RCATGY	1 cut(s)	775
XcmI	CCANNNNNNNNNTGG	1 cut(s)	956
XmaI	CCCGGG	1 cut(s)	55
XmiI	GTMKAC	1 cut(s)	549
XmnI	GAANNNNTTC	1 cut(s)	600
ZraI	GACGTC	1 cut(s)	130
Zsp2I	ATGCAT	1 cut(s)	471

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.