Rmu_sc0006514.1_g000031

protein desumoylation

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006514.1
OG0000124
Physical Location & Seq
Reverse (-)
150627 .. 155079
4453 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006514.1_g000031.1.cds

Sequence Viewer

Length: 2034 bp
atgaaaaaccaagttgcaatattatttcaagagataggttgttcccttgaagctgaggttggacatgataatggatgtgataatttggatgagtgtgaagcgagaactgaagattgtctggtcaatcctacagtaggtcgacgcatgagggaatttagagcaatatgtactggtttgtcagaagagaagcaaatagcaattgatgctaccggttatggggctatatactcgttcaggtgcagcgaactgaatgtccgtctatgccacatgatgtgcaataactttgatgtcgaaaactcaacaatcaagattcacgggagacatttaagggtaacccctgaagacttccgtcatgtaatgagtgtaagggatggtggggcagacgtagatataagtggaagcttggatgcacctgacattgtagagttgaaggctaaatttggtggtgctgacgagaaaataagcttggatgctgtggggaagatggtggtgcaatcagaaaatgctgatgatacatttataatcagtttttgtttgtatgccctgtcaactattattatgccaactgaaagtgatgcagtggatcccaggctacttatcgctataaaggatccaaaaacaattagcacaaaaaattgggcgtcctttgcatttagaaatcttattgatggacttagaaggtataagaatggggcggcatcaacggaacgagctaaggattacgcaagtggtactgttgtggacggtgttgtggacaaatggatcttagtggttttgaacctcgatgtgggagaatgtgagatttgggacagctaccccgacattgatggcagacagcgtcaggagtcttatgcaaatgttattgtggagctctttcagaaggtgttttgtaatgcaattagatcgttgccggcattgtatgcaagactagcctcattgtccacagtgtatccaaaagaatccgcaaccaacccaaacattgaggattctggtatatttttaatcaagaacatgcagtattaccggaaacgctggttcgaaccggcattatcatttgtaatgcacaagttgtcatttttcattatacatatactatactgcagcatcattccggaaattgttgacgactgtttcattatagcttatgtattggctctgaccctagtaatatgtccggaaacaagtaatgacgtacaaagtgggttgttgttgccattactagatacccgcaatataggagcgaagaattgggcaacatttgcagtggactacttgatggagggaataagaaagcatcgtgaagaaggatccccggttgtagcgagatgtgcactatatctgaagctggtatattgtgacaaagttggtgagaagttactgccaaaggagaggctagtggcacctgtgatgaattggagccttggggagataaatctgttgctgggtaggttagtagcagaaactaaaaccaagataatgggtgagacgggggataattgtaataaggggactagtgtggatgaggcagtgaacgacgaggagtctgtgggatttccattaagaaaatcactatatgaagacatgtttgagcttatggtcgacgtgggaaggttaaaagatgatatggtggttgtgaaagaaatcgtatccgtaatatcgcagaaagttttggagctaacaaatggtgtgttggtgcttttggaatctttattgaaggtgaagaaaacttgtgttgccgagattaaagagtgccgattcatgcggatgaacatgcatgatacggaggaacgacatgaaggagaggaatattgtagcctacatcgccatgcagtagagcaaggaattgaactggggcaaaacgtaattttagaagaagtacatggccatgaaaaggcggttcggtcagacactggaagcagcccaaccggagcacaatgtcggaaaagaaaaagcttcagggaagaaggccccattaaagacatgggtgtgaaccgaagtcatggacgtgctgtgggtgaaaacagaagtgattag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_C48

Protein Analysis

677

Amino Acids

75.84

Weight (kDa)

5.3

Isoelectric Point (pI)

38.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000124)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g10992 FvH4_2g25150 FvH4_2g27910 FvH4_2g27931 FvH4_4g09443 FvH4_4g09490 FvH4_4g15990 FvH4_4g15991 FvH4_6g07180 FvH4_6g40320 FvH4_7g10222 FvH4_7g10251
rosa_chinensis RchiOBHm_Chr2g0155611
rosa_laevigata RLG00000009253 RLG00000009254 RLG00000011848 RLG00000017301 RLG00000017302 RLG00000034909
rosa_multiflora Rmu_co8063658.1_g000001 Rmu_co8240443.1_g000001 Rmu_co8264451.1_g000001 Rmu_co8381937.1_g000001 Rmu_co8419903.1_g000001 Rmu_co8513405.1_g000002 Rmu_co8522915.1_g000001 Rmu_co8522915.1_g000004 Rmu_sc0000279.1_g000024 Rmu_sc0000279.1_g000048 Rmu_sc0000642.1_g000017 Rmu_sc0002045.1_g000015 Rmu_sc0002045.1_g000018 Rmu_sc0002045.1_g000023 Rmu_sc0002045.1_g000028 Rmu_sc0003047.1_g000008 Rmu_sc0003179.1_g000019 Rmu_sc0003179.1_g000020 Rmu_sc0003179.1_g000022 Rmu_sc0003179.1_g000023 Rmu_sc0003422.1_g000011 Rmu_sc0004999.1_g000014 Rmu_sc0005712.1_g000018 Rmu_sc0005712.1_g000023 Rmu_sc0006198.1_g000019 Rmu_sc0006373.1_g000005 Rmu_sc0006514.1_g000028 Rmu_sc0006514.1_g000031 Rmu_sc0007367.1_g000010 Rmu_sc0011475.1_g000002 Rmu_sc0025304.1_g000001 Rmu_ssc0000161.1_g000030 Rmu_ssc0000161.1_g000032 Rmu_ssc0000387.1_g000018
rosa_roxburghii Rroxscaffold_1G00031090 Rroxscaffold_1G00032770 Rroxscaffold_1G00068950 Rroxscaffold_1G00069000 Rroxscaffold_1G00069010 Rroxscaffold_2G00129060 Rroxscaffold_2G00129100 Rroxscaffold_4G00309310 Rroxscaffold_4G00309320 Rroxscaffold_5G00350620 Rroxscaffold_5G00350630 Rroxscaffold_7G00162650 Rroxscaffold_7G00162660 Rroxscaffold_7G00162710
rosa_rugosa Rorug02G0564700 Rorug02G0564700 Rorug03G0343100 Rorug04G0189700 Rorug05G0102800 Rorug05G0102900 Rorug05G0103000 Rorug05G0106500 Rorug05G0106600 Rorug05G0106700 Rorug05G0252800 Rorug07G0182100 Rorug07G0283500 Rorug07G0283600
rosa_samantha Rh1AG004000 Rh1AG004100 Rh1AG004200 Rh1AG004400 Rh1AG004500 Rh1AG004600 Rh1AG004800 Rh1AG004900 Rh1AG005300 Rh1AG007000 Rh1AG115000 Rh1CG049400 Rh1CG055400 Rh1CG111000 Rh1DG053600 Rh1DG053700 Rh1DG059300 Rh1DG119700 Rh1DG177100 Rh1DG177200 Rh2AG353800 Rh2AG354000 Rh2AG354100 Rh2AG354300 Rh2AG354400 Rh2AG354500 Rh2AG354600 Rh2AG354700 Rh2AG642300 Rh2AG642400 Rh2AG642500 Rh2BG336500 Rh2BG336600 Rh2BG336700 Rh2BG336800 Rh2BG336900 Rh2CG299900 Rh2CG300000 Rh2CG300100 Rh2DG337000 Rh2DG337100 Rh3AG246600 Rh3BG121900 Rh3BG122300 Rh3BG122600 Rh3BG122700 Rh3DG304800 Rh3DG304900 Rh4AG148800 Rh4AG249000 Rh4AG249100 Rh4AG249200 Rh4BG182700 Rh4BG182800 Rh4BG182900 Rh4BG254400 Rh4BG254500 Rh4BG254600 Rh4CG155500 Rh4CG155700 Rh4DG057900 Rh4DG058000 Rh4DG058100 Rh4DG058200 Rh4DG129100 Rh5AG364500 Rh5AG364600 Rh5AG364800 Rh5AG365300 Rh5CG363700 Rh5CG497600 Rh5DG239500 Rh5DG239600 Rh6AG173500 Rh6AG175400 Rh6BG075900 Rh6BG076300 Rh6BG076400 Rh6BG076500 Rh6BG076600 Rh6CG151000 Rh6CG151200 Rh6CG151300 Rh6CG151400 Rh6CG205200 Rh6CG205300 Rh6CG419700 Rh6CG419900 Rh6CG420100 Rh6DG498700 Rh6DG498800 Rh7AG329000 Rh7AG329100 Rh7AG329300 Rh7AG329400 Rh7AG353000 Rh7AG353100 Rh7AG353300 Rh7AG353400 Rh7AG353500 Rh7CG346400 Rh7CG346500 Rh7CG346700 Rh7CG370800 Rh7CG370900 Rh7CG371000 Rh7CG371100 Rh7DG325000 Rh7DG325100 Rh7DG325200 Rh7DG325300 Rh7DG353100 Rh7DG353200 Rh7DG353300 Rh7DG363500 Rh7DG364000
rosa_wichuraiana Rw0G002290 Rw0G012780 Rw1G000260 Rw1G000270 Rw1G010400 Rw1G010410 Rw1G010420 Rw1G010430 Rw1G010440 Rw2G003210 Rw2G003220 Rw4G010970 Rw5G048520 Rw6G013320 Rw6G013470 Rw6G014940 Rw6G016570 Rw6G016590 Rw6G016600 Rw6G016610 Rw6G016620 Rw6G035450 Rw7G027760 Rw7G030460

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 521
AccB1I GGYRCC 1 cut(s) 1399
AccI GTMKAC 2 cut(s) 139, 1599
AccIII TCCGGA 2 cut(s) 1111, 1174
AciI CCGC 5 cut(s) 695, 963, 1228, 1762, 1895
AclWI GGATC 7 cut(s) 578, 591, 605, 618, 770, 1302, 1315
AcoI YGGCCR 1 cut(s) 1882
AcsI RAATTY 2 cut(s) 152, 437
AcuI CTGAAG 4 cut(s) 129, 360, 1361, 1939
AcyI GRCGYC 1 cut(s) 641
AfaI GTAC 4 cut(s) 169, 733, 1194, 1878
AfiI CCNNNNNNNGG 4 cut(s) 134, 216, 787, 1891
AflIII ACRYGT 1 cut(s) 1581
AgeI ACCGGT 1 cut(s) 209
AgsI TTSAA 6 cut(s) 29, 50, 430, 778, 1714, 1847
AhdI GACNNNNNGTC 1 cut(s) 1540
AhlI ACTAGT 1 cut(s) 1511
AjiI CACGTC 2 cut(s) 1603, 2006
AjnI CCWGG 1 cut(s) 587
AjuI GAANNNNNNNTTGG 4 cut(s) 42, 74, 449, 481
AloI GAACNNNNNNTCC 2 cut(s) 237, 269
Alw21I GWGCWC 3 cut(s) 873, 1333, 1933
Alw26I GTCTC 2 cut(s) 313, 1478
Alw44I GTGCAC 1 cut(s) 1329
AlwI GGATC 7 cut(s) 578, 591, 605, 618, 770, 1302, 1315
AlwNI CAGNNNCTG 1 cut(s) 1910
Aor13HI TCCGGA 2 cut(s) 1111, 1174
AoxI GGCC 2 cut(s) 1882, 1966
ApaLI GTGCAC 1 cut(s) 1329
ApeKI GCWGC 3 cut(s) 240, 1101, 1917
ApoI RAATTY 2 cut(s) 152, 437
ArsI GACNNNNNNTTYG 2 cut(s) 237, 269
AsiGI ACCGGT 1 cut(s) 209
AspS9I GGNCC 1 cut(s) 1967
AsuC2I CCSGG 1 cut(s) 1313
AsuHPI GGTGA 4 cut(s) 1379, 1493, 1729, 2027
AsuII TTCGAA 1 cut(s) 1038
BaeGI GKGCMC 1 cut(s) 1333
BaeI ACNNNNGTAYC 2 cut(s) 723, 756
BalI TGGCCA 1 cut(s) 1884
BamHI GGATCC 3 cut(s) 583, 610, 1307
BanI GGYRCC 1 cut(s) 1399
BanII GRGCYC 1 cut(s) 873
BbsI GAAGAC 2 cut(s) 348, 1584
Bbv12I GWGCWC 3 cut(s) 873, 1333, 1933
BbvCI CCTCAGC 1 cut(s) 54
BbvI GCAGC 3 cut(s) 252, 1113, 1929
BccI CCATC 5 cut(s) 365, 478, 662, 821, 1270
BcgI CGANNNNNNTGC 2 cut(s) 885, 919
BciT130I CCWGG 1 cut(s) 589
BciVI GTATCC 2 cut(s) 960, 1657
BcnI CCSGG 1 cut(s) 1313
BcoDI GTCTC 2 cut(s) 313, 1478
BcuI ACTAGT 1 cut(s) 1511
BfaI CTAG 5 cut(s) 929, 1163, 1220, 1394, 1512
BfmI CTRYAG 2 cut(s) 129, 1099
BfuI GTATCC 2 cut(s) 960, 1657
BisI GCNGC 4 cut(s) 241, 696, 1102, 1918
BlsI GCNGC 4 cut(s) 242, 697, 1103, 1919
Bme1390I CCNGG 2 cut(s) 589, 1313
BmeRI GACNNNNNGTC 1 cut(s) 1540
BmgBI CACGTC 2 cut(s) 1603, 2006
BmgT120I GGNCC 1 cut(s) 1967
BmiI GGNNCC 6 cut(s) 585, 612, 1309, 1401, 1418, 1969
BmrFI CCNGG 2 cut(s) 589, 1313
BmrI ACTGGG 1 cut(s) 1859
BmsI GCATC 7 cut(s) 193, 397, 460, 565, 707, 1113, 1303
BmuI ACTGGG 1 cut(s) 1859
BoxI GACNNNNGTC 1 cut(s) 348
BpiI GAAGAC 2 cut(s) 348, 1584
Bpu10I CCTNAGC 2 cut(s) 54, 714
Bpu14I TTCGAA 1 cut(s) 1038
BpuMI CCSGG 1 cut(s) 1313
BsaHI GRCGYC 1 cut(s) 641
BsaJI CCNNGG 3 cut(s) 587, 1311, 1420
BsaWI WCCGGW 5 cut(s) 209, 1023, 1111, 1174, 1925
Bsc4I CCNNNNNNNGG 4 cut(s) 134, 216, 787, 1891
Bse118I RCCGGY 3 cut(s) 209, 910, 1042
Bse1I ACTGG 3 cut(s) 175, 1854, 1915
BseAI TCCGGA 2 cut(s) 1111, 1174
BseBI CCWGG 1 cut(s) 589
BseDI CCNNGG 3 cut(s) 587, 1311, 1420
BseGI GGATG 7 cut(s) 80, 94, 376, 412, 475, 1525, 1770
BseLI CCNNNNNNNGG 4 cut(s) 134, 216, 787, 1891
BseMII CTCAG 1 cut(s) 45
BseNI ACTGG 3 cut(s) 175, 1854, 1915
BseRI GAGGAG 1 cut(s) 1553
BseSI GKGCMC 1 cut(s) 1333
BseXI GCAGC 3 cut(s) 252, 1113, 1929
BseYI CCCAGC 1 cut(s) 1441
BsgI GTGCAG 1 cut(s) 259
BshFI GGCC 2 cut(s) 1884, 1968
BshNI GGYRCC 1 cut(s) 1399
BshTI ACCGGT 1 cut(s) 209
BsiHKAI GWGCWC 3 cut(s) 873, 1333, 1933
BsiSI CCGG 8 cut(s) 210, 911, 1024, 1043, 1112, 1175, 1313, 1926
BslFI GGGAC 2 cut(s) 821, 1522
BslI CCNNNNNNNGG 4 cut(s) 134, 216, 787, 1891
BsmAI GTCTC 2 cut(s) 313, 1478
BsmBI CGTCTC 1 cut(s) 1478
BsmFI GGGAC 2 cut(s) 821, 1522
BsnI GGCC 2 cut(s) 1884, 1968
Bsp119I TTCGAA 1 cut(s) 1038
Bsp1286I GDGCHC 3 cut(s) 873, 1333, 1933
Bsp13I TCCGGA 2 cut(s) 1111, 1174
Bsp143I GATC 5 cut(s) 583, 610, 762, 902, 1307
BspACI CCGC 5 cut(s) 695, 963, 1228, 1762, 1895
BspANI GGCC 2 cut(s) 1884, 1968
BspCNI CTCAG 1 cut(s) 46
BspEI TCCGGA 2 cut(s) 1111, 1174
BspLI GGNNCC 6 cut(s) 585, 612, 1309, 1401, 1418, 1969
BspMAI CTGCAG 1 cut(s) 1103
BspPI GGATC 7 cut(s) 578, 591, 605, 618, 770, 1302, 1315
BspT104I TTCGAA 1 cut(s) 1038
BspT107I GGYRCC 1 cut(s) 1399
BsrFI RCCGGY 3 cut(s) 209, 910, 1042
BsrI ACTGG 3 cut(s) 175, 1854, 1915
BssAI RCCGGY 3 cut(s) 209, 910, 1042
BssECI CCNNGG 3 cut(s) 587, 1311, 1420
BssMI GATC 5 cut(s) 583, 610, 762, 902, 1307
BssNI GRCGYC 1 cut(s) 641
BssT1I CCWWGG 1 cut(s) 1420
Bst2UI CCWGG 1 cut(s) 589
Bst4CI ACNGT 5 cut(s) 133, 736, 746, 946, 1130
Bst6I CTCTTC 1 cut(s) 177
BstACI GRCGYC 1 cut(s) 641
BstAPI GCANNNNNTGC 3 cut(s) 203, 920, 1259
BstBI TTCGAA 1 cut(s) 1038
BstC8I GCNNGC 1 cut(s) 912
BstDEI CTNAG 4 cut(s) 54, 674, 714, 766
BstEII GGTNACC 1 cut(s) 331
BstENI CCTNNNNNAGG 1 cut(s) 132
BstF5I GGATG 7 cut(s) 80, 94, 376, 412, 475, 1525, 1770
BstKTI GATC 5 cut(s) 586, 613, 765, 905, 1310
BstMAI GTCTC 2 cut(s) 313, 1478
BstMBI GATC 5 cut(s) 583, 610, 762, 902, 1307
BstMWI GCNNNNNNNGC 7 cut(s) 203, 647, 920, 929, 1259, 1328, 1821
BstNI CCWGG 1 cut(s) 589
BstNSI RCATGY 3 cut(s) 1015, 1585, 1774
BstPAI GACNNNNGTC 1 cut(s) 348
BstPI GGTNACC 1 cut(s) 331
BstSCI CCNGG 2 cut(s) 587, 1311
BstSFI CTRYAG 2 cut(s) 129, 1099
BstSLI GKGCMC 1 cut(s) 1333
BstV1I GCAGC 3 cut(s) 252, 1113, 1929
BstV2I GAAGAC 2 cut(s) 348, 1584
BstX2I RGATCY 4 cut(s) 583, 610, 762, 1307
BstXI CCANNNNNNTGG 1 cut(s) 1477
BstYI RGATCY 4 cut(s) 583, 610, 762, 1307
BsuI GTATCC 2 cut(s) 960, 1657
BsuRI GGCC 2 cut(s) 1884, 1968
BtgZI GCGATG 1 cut(s) 1805
BtrI CACGTC 2 cut(s) 1603, 2006
BtsCI GGATG 7 cut(s) 80, 94, 376, 412, 475, 1525, 1770
BtsI GCAGTG 3 cut(s) 585, 1269, 1533
BtsIMutI CAGTG 5 cut(s) 585, 951, 1269, 1533, 1908
Cac8I GCNNGC 1 cut(s) 912
CaiI CAGNNNCTG 1 cut(s) 1910
Cfr10I RCCGGY 3 cut(s) 209, 910, 1042
Cfr13I GGNCC 1 cut(s) 1967
CseI GACGC 3 cut(s) 150, 630, 827
Csp6I GTAC 4 cut(s) 168, 732, 1193, 1877
CspAI ACCGGT 1 cut(s) 209
CviQI GTAC 4 cut(s) 168, 732, 1193, 1877
DdeI CTNAG 4 cut(s) 54, 674, 714, 766
DpnI GATC 5 cut(s) 585, 612, 764, 904, 1309
DpnII GATC 5 cut(s) 583, 610, 762, 902, 1307
DriI GACNNNNNGTC 1 cut(s) 1540
EaeI YGGCCR 1 cut(s) 1882
Eam1104I CTCTTC 1 cut(s) 177
Eam1105I GACNNNNNGTC 1 cut(s) 1540
EarI CTCTTC 1 cut(s) 177
Ecl136II GAGCTC 1 cut(s) 871
Eco130I CCWWGG 1 cut(s) 1420
Eco24I GRGCYC 1 cut(s) 873
Eco53kI GAGCTC 1 cut(s) 871
Eco57I CTGAAG 4 cut(s) 129, 360, 1361, 1939
Eco91I GGTNACC 1 cut(s) 331
EcoICRI GAGCTC 1 cut(s) 871
EcoNI CCTNNNNNAGG 1 cut(s) 132
EcoO109I RGGNCCY 1 cut(s) 1967
EcoO65I GGTNACC 1 cut(s) 331
EcoRII CCWGG 1 cut(s) 587
EcoT14I CCWWGG 1 cut(s) 1420
EcoT22I ATGCAT 1 cut(s) 1776
EcoT38I GRGCYC 1 cut(s) 873
ErhI CCWWGG 1 cut(s) 1420
Esp3I CGTCTC 1 cut(s) 1478
FaqI GGGAC 2 cut(s) 821, 1522
FauI CCCGC 1 cut(s) 1235
FblI GTMKAC 2 cut(s) 139, 1599
Fnu4HI GCNGC 4 cut(s) 241, 696, 1102, 1918
FokI GGATG 7 cut(s) 87, 101, 383, 419, 482, 1532, 1777
FriOI GRGCYC 1 cut(s) 873
Fsp4HI GCNGC 4 cut(s) 241, 696, 1102, 1918
FspBI CTAG 5 cut(s) 929, 1163, 1220, 1394, 1512
GluI GCNGC 4 cut(s) 241, 696, 1102, 1918
GsaI CCCAGC 1 cut(s) 1445
HaeIII GGCC 2 cut(s) 1884, 1968
HapII CCGG 8 cut(s) 210, 911, 1024, 1043, 1112, 1175, 1313, 1926
HgaI GACGC 3 cut(s) 150, 630, 827
Hin1I GRCGYC 1 cut(s) 641
HincII GTYRAC 4 cut(s) 140, 549, 1123, 1600
HindII GTYRAC 4 cut(s) 140, 549, 1123, 1600
HindIII AAGCTT 3 cut(s) 400, 463, 1951
HinfI GANTC 7 cut(s) 310, 845, 959, 986, 1541, 1703, 1755
HpaII CCGG 8 cut(s) 210, 911, 1024, 1043, 1112, 1175, 1313, 1926
HphI GGTGA 4 cut(s) 1379, 1493, 1729, 2027
Hpy188I TCNGA 7 cut(s) 181, 499, 879, 1158, 1341, 1906, 1941
Hpy188III TCNNGA 7 cut(s) 29, 307, 842, 1006, 1112, 1175, 1298
Hpy99I CGWCG 3 cut(s) 144, 1538, 1604
HpyAV CCTTC 8 cut(s) 424, 672, 874, 1298, 1602, 1708, 1790, 1958
HpyCH4III ACNGT 5 cut(s) 133, 736, 746, 946, 1130
HpyCH4IV ACGT 5 cut(s) 384, 1191, 1602, 1860, 2005
HpyF10VI GCNNNNNNNGC 7 cut(s) 203, 647, 920, 929, 1259, 1328, 1821
HpyF3I CTNAG 4 cut(s) 54, 674, 714, 766
HpySE526I ACGT 5 cut(s) 384, 1191, 1602, 1860, 2005
Hsp92I GRCGYC 1 cut(s) 641
Kpn2I TCCGGA 2 cut(s) 1111, 1174
KroI GCCGGC 1 cut(s) 910
KroNI GCCGGC 1 cut(s) 912
Kzo9I GATC 5 cut(s) 583, 610, 762, 902, 1307
LmnI GCTCC 5 cut(s) 868, 1238, 1416, 1672, 1928
Lsp1109I GCAGC 3 cut(s) 252, 1113, 1929
LweI GCATC 7 cut(s) 193, 397, 460, 565, 707, 1113, 1303
MaeI CTAG 5 cut(s) 929, 1163, 1220, 1394, 1512
MaeII ACGT 5 cut(s) 384, 1191, 1602, 1860, 2005
MaeIII GTNAC 3 cut(s) 331, 1355, 1374
MalI GATC 5 cut(s) 585, 612, 764, 904, 1309
MboI GATC 5 cut(s) 583, 610, 762, 902, 1307
MfeI CAATTG 1 cut(s) 198
MflI RGATCY 4 cut(s) 583, 610, 762, 1307
MhlI GDGCHC 3 cut(s) 873, 1333, 1933
MlsI TGGCCA 1 cut(s) 1884
MluNI TGGCCA 1 cut(s) 1884
MlyI GAGTC 2 cut(s) 854, 1550
MmeI TCCRAC 2 cut(s) 40, 1919
Mox20I TGGCCA 1 cut(s) 1884
Mph1103I ATGCAT 1 cut(s) 1776
MroI TCCGGA 2 cut(s) 1111, 1174
MroNI GCCGGC 1 cut(s) 910
MscI TGGCCA 1 cut(s) 1884
MseI TTAA 6 cut(s) 326, 1001, 1559, 1613, 1743, 1974
MslI CAYNNNNRTG 6 cut(s) 69, 1763, 1824, 1884, 1985, 2004
Msp20I TGGCCA 1 cut(s) 1884
MspI CCGG 8 cut(s) 210, 911, 1024, 1043, 1112, 1175, 1313, 1926
MspR9I CCNGG 2 cut(s) 589, 1313
MunI CAATTG 1 cut(s) 198
MvaI CCWGG 1 cut(s) 589
MwoI GCNNNNNNNGC 7 cut(s) 203, 647, 920, 929, 1259, 1328, 1821
NaeI GCCGGC 1 cut(s) 912
NciI CCSGG 1 cut(s) 1313
NdeII GATC 5 cut(s) 583, 610, 762, 902, 1307
NgoMIV GCCGGC 1 cut(s) 910
NlaIV GGNNCC 6 cut(s) 585, 612, 1309, 1401, 1418, 1969
NmeAIII GCCGAG 1 cut(s) 1762
NmuCI GTSAC 1 cut(s) 1355
NsiI ATGCAT 1 cut(s) 1776
NspI RCATGY 3 cut(s) 1015, 1585, 1774
NspV TTCGAA 1 cut(s) 1038
PciI ACATGT 1 cut(s) 1581
PdiI GCCGGC 1 cut(s) 912
PfeI GAWTC 5 cut(s) 310, 959, 986, 1703, 1755
PflFI GACNNNGTC 1 cut(s) 837
PinAI ACCGGT 1 cut(s) 209
PkrI GCNGC 4 cut(s) 242, 697, 1103, 1919
PleI GAGTC 2 cut(s) 853, 1549
PpsI GAGTC 2 cut(s) 853, 1549
PscI ACATGT 1 cut(s) 1581
PshAI GACNNNNGTC 1 cut(s) 348
PsiI TTATAA 1 cut(s) 521
Psp124BI GAGCTC 1 cut(s) 873
Psp6I CCWGG 1 cut(s) 587
PspEI GGTNACC 1 cut(s) 331
PspFI CCCAGC 1 cut(s) 1441
PspGI CCWGG 1 cut(s) 587
PspN4I GGNNCC 6 cut(s) 585, 612, 1309, 1401, 1418, 1969
PspPI GGNCC 1 cut(s) 1967
PstI CTGCAG 1 cut(s) 1103
PstNI CAGNNNCTG 1 cut(s) 1910
PsuI RGATCY 4 cut(s) 583, 610, 762, 1307
PsyI GACNNNGTC 1 cut(s) 837
RsaI GTAC 4 cut(s) 169, 733, 1194, 1878
RsaNI GTAC 4 cut(s) 168, 732, 1193, 1877
RseI CAYNNNNRTG 6 cut(s) 69, 1763, 1824, 1884, 1985, 2004
SacI GAGCTC 1 cut(s) 873
SalI GTCGAC 2 cut(s) 138, 1598
SaqAI TTAA 6 cut(s) 326, 1001, 1559, 1613, 1743, 1974
SatI GCNGC 4 cut(s) 241, 696, 1102, 1918
Sau3AI GATC 5 cut(s) 583, 610, 762, 902, 1307
Sau96I GGNCC 1 cut(s) 1967
SchI GAGTC 2 cut(s) 854, 1550
ScrFI CCNGG 2 cut(s) 589, 1313
SduI GDGCHC 3 cut(s) 873, 1333, 1933
SfaNI GCATC 7 cut(s) 193, 397, 460, 565, 707, 1113, 1303
SfcI CTRYAG 2 cut(s) 129, 1099
SfuI TTCGAA 1 cut(s) 1038
SmiMI CAYNNNNRTG 6 cut(s) 69, 1763, 1824, 1884, 1985, 2004
SpeI ACTAGT 1 cut(s) 1511
SsiI CCGC 5 cut(s) 695, 963, 1228, 1762, 1895
SspI AATATT 2 cut(s) 21, 1808
SspMI CTAG 5 cut(s) 929, 1163, 1220, 1394, 1512
SstI GAGCTC 1 cut(s) 873
StyD4I CCNGG 2 cut(s) 587, 1311
StyI CCWWGG 1 cut(s) 1420
TaaI ACNGT 5 cut(s) 133, 736, 746, 946, 1130
TaiI ACGT 5 cut(s) 387, 1194, 1605, 1863, 2008
TaqI TCGA 5 cut(s) 139, 291, 783, 1038, 1599
TaqII GACCGA 1 cut(s) 1890
TatI WGTACW 2 cut(s) 167, 1876
TauI GCSGC 1 cut(s) 698
TfiI GAWTC 5 cut(s) 310, 959, 986, 1703, 1755
Tru1I TTAA 6 cut(s) 326, 1001, 1559, 1613, 1743, 1974
Tru9I TTAA 6 cut(s) 326, 1001, 1559, 1613, 1743, 1974
TscAI CASTG 5 cut(s) 585, 951, 1269, 1533, 1915
TseFI GTSAC 1 cut(s) 1355
TseI GCWGC 3 cut(s) 240, 1101, 1917
Tsp45I GTSAC 1 cut(s) 1355
TspDTI ATGAA 9 cut(s) 17, 1069, 1123, 1424, 1590, 1747, 1781, 1809, 1902
TspGWI ACGGA 5 cut(s) 245, 338, 719, 1639, 1796
TspRI CASTG 5 cut(s) 585, 951, 1269, 1533, 1915
Tth111I GACNNNGTC 1 cut(s) 837
VneI GTGCAC 1 cut(s) 1329
XagI CCTNNNNNAGG 1 cut(s) 132
XapI RAATTY 2 cut(s) 152, 437
XceI RCATGY 3 cut(s) 1015, 1585, 1774
XcmI CCANNNNNNNNNTGG 1 cut(s) 1978
XmiI GTMKAC 2 cut(s) 139, 1599
XspI CTAG 5 cut(s) 929, 1163, 1220, 1394, 1512
Zsp2I ATGCAT 1 cut(s) 1776
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.