Rmu_sc0002045.1_g000015

protein desumoylation

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002045.1
OG0000124
Physical Location & Seq
Reverse (-)
63737 .. 67246
3510 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002045.1_g000015.1.cds

Sequence Viewer

Length: 2322 bp
atggacgaacgaggcattgtgattgcgaataaggaaggggctagtaagttttcgagggaaaatgttcgaataatgaccaattcaaaactctgggaatttagtgcagccgtgaattacatgtcagaagggaaaaaagaggctgtgaggggcattggcctaggctatactttacacttgggatgtacggatttggtacaaccgatcattgaagcaacagttaaatatgttgatccgttgaattacaaaatattgatacacggcatcgtgtgctacataaacggggacgagtttggacgtgtaatgggcatacacgacggtggagaagggattgtgctaggggagggcaaagaagcaaaggagtatggaaaaacagttcgtccaatgtgcgatgcggaaggaagaatgacaattgagttgttgactgacatagtaagtaaacgaagagaggtcgacgacactttcaagattgcgtttgcattgttggcactaacttgtgtgatatgcccgggagtagatgatgcggttgacgtaggcttgttgcttccacttatggagacatcaaaaatagtgcgaaaaaattgggcctcttttgcagtcagtcgcctaatggagggtgtcaaacgtcaccaggaggaaggaactcccgtcgtggggggatgtttgatatttcttcaacttctttaccttgacaaggtcggggacgttcttacacctgataaggacgacctttgtacacctgtaatgtattggaacactaataaggtgcaggaaattgtgaacaagataaggttgacgggaggccacaaaagtcccactgtcatgttggagaagagcaagaggacgaagagattacaagacgcaggtcatgaatgcggggtttcgggattcggactgaatggggacgtccacaagaccatgatggacttgcagttggatgtgagttcgatgaaggaccgcatgtgggatatgaaatgggaagtaagtcgaatgcaacccaaattcttggattttacaaagggggtagaattggcacttgaggaactgaaacaaacattttcacaagtcaaaagtgaattttacacactctctaagcaacaattaggcttggaaaggataaaggaggacaaattccgggtaatggacaatgtggtcaacggcatgggagggattgacgagacaaaaaggcagccttccgccgtgggaatgtgcaacgatgcctgcagtggagaaactcatttgccaaataacaagggtcacagaagcgtgagggaacatgtgagaaagggacttcggtcggagatgtcatgcagcccaacaggaaaatacagcatggaaaggcaggaaattgttaaaaccgcagacataatccgaaaagcttcgaagcgaagtcatgggactgcaatgtacacagcattacatgaatatgaggaatatgcaagtattttacagggcaaagtgggaatgtcacagtgcagcgttggggtaaatatacgatatggagctgggccgtataggctgaagcgcaaactgtctgagtctgaagtgataaattatgttgttgcgtacctcaataaggaaggaggcaacaattggtattggcctacacattttgagtcaagatctaaaagtgcggagggtcaaagattcacgcagtgggtggcacataccaggagggtctgcgccctccaacagtttgatggtaggatcgacacttgtgaaaggatattcttacctgtgcatgaaggttcaatcaaggatgggcattggattctcattgtcgttgacatggtcacaaaggttgctgaagtatgggatagcggagcaggaccagtactacagccaccgagagtggaaaacattttgcttgtgctgagacacatagaccgggtaatgtggtttgataacataacgcaacccggaagcatggtcaaggtagaagattttacaattgttgaggccccgaatttgctaaagcaacaaaacgcatttgactgcggtgtctacgtcatacaaaacatgcagcattatcggaccgactgggcaaaacagtacgactcggaatcgcagcgagcagccatattattggattgtttaacagccccaaataacgagtcggatgcaaacgtaggagcggatatcgtaattagtgacattggggttcaaaacacagcaatgcagcatgatggtttgcttcacaatggacaaggaaagcatatggaagaatgggacggagggaaaggggagtatagacagagacaaggtcgtgcaggacaaggagggcatcggaatgttgggacaacctcccatcaaaaacccatataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_C48

Protein Analysis

773

Amino Acids

86.77

Weight (kDa)

6.91

Isoelectric Point (pI)

38.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000124)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g10992 FvH4_2g25150 FvH4_2g27910 FvH4_2g27931 FvH4_4g09443 FvH4_4g09490 FvH4_4g15990 FvH4_4g15991 FvH4_6g07180 FvH4_6g40320 FvH4_7g10222 FvH4_7g10251
rosa_chinensis RchiOBHm_Chr2g0155611
rosa_laevigata RLG00000009253 RLG00000009254 RLG00000011848 RLG00000017301 RLG00000017302 RLG00000034909
rosa_multiflora Rmu_co8063658.1_g000001 Rmu_co8240443.1_g000001 Rmu_co8264451.1_g000001 Rmu_co8381937.1_g000001 Rmu_co8419903.1_g000001 Rmu_co8513405.1_g000002 Rmu_co8522915.1_g000001 Rmu_co8522915.1_g000004 Rmu_sc0000279.1_g000024 Rmu_sc0000279.1_g000048 Rmu_sc0000642.1_g000017 Rmu_sc0002045.1_g000015 Rmu_sc0002045.1_g000018 Rmu_sc0002045.1_g000023 Rmu_sc0002045.1_g000028 Rmu_sc0003047.1_g000008 Rmu_sc0003179.1_g000019 Rmu_sc0003179.1_g000020 Rmu_sc0003179.1_g000022 Rmu_sc0003179.1_g000023 Rmu_sc0003422.1_g000011 Rmu_sc0004999.1_g000014 Rmu_sc0005712.1_g000018 Rmu_sc0005712.1_g000023 Rmu_sc0006198.1_g000019 Rmu_sc0006373.1_g000005 Rmu_sc0006514.1_g000028 Rmu_sc0006514.1_g000031 Rmu_sc0007367.1_g000010 Rmu_sc0011475.1_g000002 Rmu_sc0025304.1_g000001 Rmu_ssc0000161.1_g000030 Rmu_ssc0000161.1_g000032 Rmu_ssc0000387.1_g000018
rosa_roxburghii Rroxscaffold_1G00031090 Rroxscaffold_1G00032770 Rroxscaffold_1G00068950 Rroxscaffold_1G00069000 Rroxscaffold_1G00069010 Rroxscaffold_2G00129060 Rroxscaffold_2G00129100 Rroxscaffold_4G00309310 Rroxscaffold_4G00309320 Rroxscaffold_5G00350620 Rroxscaffold_5G00350630 Rroxscaffold_7G00162650 Rroxscaffold_7G00162660 Rroxscaffold_7G00162710
rosa_rugosa Rorug02G0564700 Rorug02G0564700 Rorug03G0343100 Rorug04G0189700 Rorug05G0102800 Rorug05G0102900 Rorug05G0103000 Rorug05G0106500 Rorug05G0106600 Rorug05G0106700 Rorug05G0252800 Rorug07G0182100 Rorug07G0283500 Rorug07G0283600
rosa_samantha Rh1AG004000 Rh1AG004100 Rh1AG004200 Rh1AG004400 Rh1AG004500 Rh1AG004600 Rh1AG004800 Rh1AG004900 Rh1AG005300 Rh1AG007000 Rh1AG115000 Rh1CG049400 Rh1CG055400 Rh1CG111000 Rh1DG053600 Rh1DG053700 Rh1DG059300 Rh1DG119700 Rh1DG177100 Rh1DG177200 Rh2AG353800 Rh2AG354000 Rh2AG354100 Rh2AG354300 Rh2AG354400 Rh2AG354500 Rh2AG354600 Rh2AG354700 Rh2AG642300 Rh2AG642400 Rh2AG642500 Rh2BG336500 Rh2BG336600 Rh2BG336700 Rh2BG336800 Rh2BG336900 Rh2CG299900 Rh2CG300000 Rh2CG300100 Rh2DG337000 Rh2DG337100 Rh3AG246600 Rh3BG121900 Rh3BG122300 Rh3BG122600 Rh3BG122700 Rh3DG304800 Rh3DG304900 Rh4AG148800 Rh4AG249000 Rh4AG249100 Rh4AG249200 Rh4BG182700 Rh4BG182800 Rh4BG182900 Rh4BG254400 Rh4BG254500 Rh4BG254600 Rh4CG155500 Rh4CG155700 Rh4DG057900 Rh4DG058000 Rh4DG058100 Rh4DG058200 Rh4DG129100 Rh5AG364500 Rh5AG364600 Rh5AG364800 Rh5AG365300 Rh5CG363700 Rh5CG497600 Rh5DG239500 Rh5DG239600 Rh6AG173500 Rh6AG175400 Rh6BG075900 Rh6BG076300 Rh6BG076400 Rh6BG076500 Rh6BG076600 Rh6CG151000 Rh6CG151200 Rh6CG151300 Rh6CG151400 Rh6CG205200 Rh6CG205300 Rh6CG419700 Rh6CG419900 Rh6CG420100 Rh6DG498700 Rh6DG498800 Rh7AG329000 Rh7AG329100 Rh7AG329300 Rh7AG329400 Rh7AG353000 Rh7AG353100 Rh7AG353300 Rh7AG353400 Rh7AG353500 Rh7CG346400 Rh7CG346500 Rh7CG346700 Rh7CG370800 Rh7CG370900 Rh7CG371000 Rh7CG371100 Rh7DG325000 Rh7DG325100 Rh7DG325200 Rh7DG325300 Rh7DG353100 Rh7DG353200 Rh7DG353300 Rh7DG363500 Rh7DG364000
rosa_wichuraiana Rw0G002290 Rw0G012780 Rw1G000260 Rw1G000270 Rw1G010400 Rw1G010410 Rw1G010420 Rw1G010430 Rw1G010440 Rw2G003210 Rw2G003220 Rw4G010970 Rw5G048520 Rw6G013320 Rw6G013470 Rw6G014940 Rw6G016570 Rw6G016590 Rw6G016600 Rw6G016610 Rw6G016620 Rw6G035450 Rw7G027760 Rw7G030460

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 1148, 1997
AatII GACGTC 1 cut(s) 906
Acc36I ACCTGC 1 cut(s) 851
AccBSI CCGCTC 1 cut(s) 2132
AccI GTMKAC 2 cut(s) 450, 2001
AclWI GGATC 2 cut(s) 224, 1712
AcsI RAATTY 5 cut(s) 95, 998, 1073, 1127, 1963
AcuI CTGAAG 3 cut(s) 1538, 1560, 1824
AcyI GRCGYC 1 cut(s) 903
AdeI CACNNNGTG 1 cut(s) 1653
AfaI GTAC 7 cut(s) 184, 195, 733, 1406, 1565, 1833, 2051
AfiI CCNNNNNNNGG 7 cut(s) 610, 650, 651, 691, 961, 1138, 1573
AflIII ACRYGT 3 cut(s) 117, 295, 1273
AgsI TTSAA 7 cut(s) 84, 209, 238, 463, 674, 1749, 2162
AjiI CACGTC 1 cut(s) 296
AjnI CCWGG 2 cut(s) 627, 1667
AleI CACNNNNGTG 1 cut(s) 315
AloI GAACNNNNNNTCC 2 cut(s) 357, 389
AluBI AGCT 2 cut(s) 1376, 1502
AluI AGCT 2 cut(s) 1376, 1502
Alw26I GTCTC 4 cut(s) 548, 1169, 1867, 2248
AlwI GGATC 2 cut(s) 224, 1712
Ama87I CYCGRG 1 cut(s) 505
AoxI GGCC 6 cut(s) 154, 582, 799, 1505, 1598, 1956
ApeKI GCWGC 8 cut(s) 104, 1186, 1308, 1473, 2020, 2065, 2072, 2176
ApoI RAATTY 5 cut(s) 95, 998, 1073, 1127, 1963
ArsI GACNNNNNNTTYG 2 cut(s) 2096, 2128
Asp700I GAANNNNTTC 2 cut(s) 63, 1375
AspA2I CCTAGG 1 cut(s) 157
AspLEI GCGC 2 cut(s) 1524, 1682
AspS9I GGNCC 6 cut(s) 582, 952, 1505, 1826, 1957, 2031
AsuC2I CCSGG 5 cut(s) 506, 507, 1133, 1886, 1917
AsuHPI GGTGA 1 cut(s) 617
AsuII TTCGAA 2 cut(s) 67, 1379
AvaI CYCGRG 1 cut(s) 505
AvaII GGWCC 3 cut(s) 952, 1826, 2031
AvrII CCTAGG 1 cut(s) 157
BbvI GCAGC 8 cut(s) 116, 1198, 1320, 1485, 2032, 2077, 2084, 2188
BccI CCATC 5 cut(s) 913, 1691, 1751, 2177, 2313
BceAI ACGGC 5 cut(s) 92, 274, 1171, 1181, 1492
BcgI CGANNNNNNTGC 4 cut(s) 2009, 2043, 2099, 2133
BciT130I CCWGG 2 cut(s) 629, 1669
BcnI CCSGG 5 cut(s) 506, 507, 1133, 1886, 1917
BcoDI GTCTC 4 cut(s) 548, 1169, 1867, 2248
BfaI CTAG 3 cut(s) 42, 158, 335
BfmI CTRYAG 2 cut(s) 1219, 1835
BfuAI ACCTGC 1 cut(s) 851
BglI GCCNNNNNGGC 1 cut(s) 1513
BglII AGATCT 1 cut(s) 1619
BisI GCNGC 8 cut(s) 105, 1187, 1309, 1474, 2021, 2066, 2073, 2177
BlnI CCTAGG 1 cut(s) 157
BlsI GCNGC 8 cut(s) 106, 1188, 1310, 1475, 2022, 2067, 2074, 2178
BmcAI AGTACT 1 cut(s) 1833
Bme1390I CCNGG 7 cut(s) 506, 507, 629, 1133, 1669, 1886, 1917
Bme18I GGWCC 3 cut(s) 952, 1826, 2031
BmeT110I CYCGRG 1 cut(s) 505
BmgBI CACGTC 1 cut(s) 296
BmgT120I GGNCC 6 cut(s) 582, 952, 1505, 1826, 1957, 2031
BmiI GGNNCC 1 cut(s) 1959
BmrFI CCNGG 7 cut(s) 506, 507, 629, 1133, 1669, 1886, 1917
BmrI ACTGGG 1 cut(s) 2047
BmsI GCATC 6 cut(s) 270, 379, 508, 1204, 2107, 2290
BmuI ACTGGG 1 cut(s) 2047
BoxI GACNNNNGTC 2 cut(s) 861, 1291
Bpu14I TTCGAA 2 cut(s) 67, 1379
BpuEI CTTGAG 1 cut(s) 1055
BpuMI CCSGG 5 cut(s) 506, 507, 1133, 1886, 1917
BsaHI GRCGYC 1 cut(s) 903
BsaJI CCNNGG 3 cut(s) 157, 505, 1197
Bsc4I CCNNNNNNNGG 7 cut(s) 610, 650, 651, 691, 961, 1138, 1573
Bse1I ACTGG 2 cut(s) 1829, 2042
Bse3DI GCAATG 2 cut(s) 1407, 2178
BseBI CCWGG 2 cut(s) 629, 1669
BseDI CCNNGG 3 cut(s) 157, 505, 1197
BseGI GGATG 5 cut(s) 185, 662, 940, 1762, 2122
BseLI CCNNNNNNNGG 7 cut(s) 610, 650, 651, 691, 961, 1138, 1573
BseMI GCAATG 2 cut(s) 1407, 2178
BseMII CTCAG 2 cut(s) 1524, 1862
BseNI ACTGG 2 cut(s) 1829, 2042
BseXI GCAGC 8 cut(s) 116, 1198, 1320, 1485, 2032, 2077, 2084, 2188
BseYI CCCAGC 1 cut(s) 1502
BsgI GTGCAG 4 cut(s) 123, 785, 1492, 2286
Bsh1285I CGRYCG 1 cut(s) 1295
BshFI GGCC 6 cut(s) 156, 584, 801, 1507, 1600, 1958
BsiEI CGRYCG 1 cut(s) 1295
BsiHKCI CYCGRG 1 cut(s) 505
BsiSI CCGG 4 cut(s) 506, 1132, 1885, 1917
BslFI GGGAC 8 cut(s) 296, 713, 795, 914, 1299, 1408, 2240, 2308
BslI CCNNNNNNNGG 7 cut(s) 610, 650, 651, 691, 961, 1138, 1573
BsmAI GTCTC 4 cut(s) 548, 1169, 1867, 2248
BsmFI GGGAC 8 cut(s) 296, 713, 795, 914, 1299, 1408, 2240, 2308
BsmI GAATGC 2 cut(s) 875, 993
BsnI GGCC 6 cut(s) 156, 584, 801, 1507, 1600, 1958
BsoBI CYCGRG 1 cut(s) 505
Bsp119I TTCGAA 2 cut(s) 67, 1379
Bsp1407I TGTACA 2 cut(s) 731, 1404
Bsp143I GATC 4 cut(s) 201, 229, 1619, 1704
BspANI GGCC 6 cut(s) 156, 584, 801, 1507, 1600, 1958
BspCNI CTCAG 2 cut(s) 1525, 1863
BspHI TCATGA 1 cut(s) 865
BspLI GGNNCC 1 cut(s) 1959
BspMAI CTGCAG 1 cut(s) 1223
BspMI ACCTGC 1 cut(s) 851
BspPI GGATC 2 cut(s) 224, 1712
BspQI GCTCTTC 1 cut(s) 824
BspT104I TTCGAA 2 cut(s) 67, 1379
BsrBI CCGCTC 1 cut(s) 2132
BsrDI GCAATG 2 cut(s) 1407, 2178
BsrGI TGTACA 2 cut(s) 731, 1404
BsrI ACTGG 2 cut(s) 1829, 2042
BssECI CCNNGG 3 cut(s) 157, 505, 1197
BssMI GATC 4 cut(s) 201, 229, 1619, 1704
BssNI GRCGYC 1 cut(s) 903
BssT1I CCWWGG 1 cut(s) 157
Bst2UI CCWGG 2 cut(s) 629, 1669
Bst4CI ACNGT 8 cut(s) 217, 317, 373, 817, 1470, 1530, 1692, 2049
Bst6I CTCTTC 3 cut(s) 436, 824, 839
BstACI GRCGYC 1 cut(s) 903
BstAPI GCANNNNNTGC 1 cut(s) 267
BstAUI TGTACA 2 cut(s) 731, 1404
BstBI TTCGAA 2 cut(s) 67, 1379
BstC8I GCNNGC 2 cut(s) 1219, 2070
BstDEI CTNAG 3 cut(s) 1089, 1533, 1871
BstDSI CCRYGG 1 cut(s) 1197
BstENI CCTNNNNNAGG 3 cut(s) 608, 689, 1571
BstF5I GGATG 5 cut(s) 185, 662, 940, 1762, 2122
BstHHI GCGC 2 cut(s) 1524, 1682
BstKTI GATC 4 cut(s) 204, 232, 1622, 1707
BstMAI GTCTC 4 cut(s) 548, 1169, 1867, 2248
BstMBI GATC 4 cut(s) 201, 229, 1619, 1704
BstMCI CGRYCG 1 cut(s) 1295
BstMWI GCNNNNNNNGC 4 cut(s) 267, 482, 590, 1513
BstNI CCWGG 2 cut(s) 629, 1669
BstNSI RCATGY 4 cut(s) 121, 961, 1277, 2020
BstPAI GACNNNNGTC 2 cut(s) 861, 1291
BstSCI CCNGG 7 cut(s) 504, 505, 627, 1131, 1667, 1884, 1915
BstSFI CTRYAG 2 cut(s) 1219, 1835
BstV1I GCAGC 8 cut(s) 116, 1198, 1320, 1485, 2032, 2077, 2084, 2188
BstX2I RGATCY 1 cut(s) 1619
BstXI CCANNNNNNTGG 2 cut(s) 1003, 2083
BstYI RGATCY 1 cut(s) 1619
BsuRI GGCC 6 cut(s) 156, 584, 801, 1507, 1600, 1958
BtgI CCRYGG 1 cut(s) 1197
BtgZI GCGATG 1 cut(s) 402
BtrI CACGTC 1 cut(s) 296
BtsCI GGATG 5 cut(s) 185, 662, 940, 1762, 2122
BtsI GCAGTG 2 cut(s) 1228, 1658
BtsIMutI CAGTG 4 cut(s) 813, 1228, 1475, 1658
BveI ACCTGC 1 cut(s) 851
Cac8I GCNNGC 2 cut(s) 1219, 2070
CciI TCATGA 1 cut(s) 865
CfoI GCGC 2 cut(s) 1524, 1682
Cfr13I GGNCC 6 cut(s) 582, 952, 1505, 1826, 1957, 2031
Cfr9I CCCGGG 1 cut(s) 505
CpoI CGGWCCG 1 cut(s) 2031
CseI GACGC 1 cut(s) 866
Csp6I GTAC 7 cut(s) 183, 194, 732, 1405, 1564, 1832, 2050
CspI CGGWCCG 1 cut(s) 2031
CviQI GTAC 7 cut(s) 183, 194, 732, 1405, 1564, 1832, 2050
DdeI CTNAG 3 cut(s) 1089, 1533, 1871
DpnI GATC 4 cut(s) 203, 231, 1621, 1706
DpnII GATC 4 cut(s) 201, 229, 1619, 1704
DraIII CACNNNGTG 1 cut(s) 1653
DrdI GACNNNNNNGTC 2 cut(s) 1148, 1997
DseDI GACNNNNNNGTC 2 cut(s) 1148, 1997
Eam1104I CTCTTC 3 cut(s) 436, 824, 839
EarI CTCTTC 3 cut(s) 436, 824, 839
EciI GGCGGA 1 cut(s) 1183
Eco130I CCWWGG 1 cut(s) 157
Eco32I GATATC 1 cut(s) 2137
Eco47I GGWCC 3 cut(s) 952, 1826, 2031
Eco57I CTGAAG 3 cut(s) 1538, 1560, 1824
Eco88I CYCGRG 1 cut(s) 505
EcoNI CCTNNNNNAGG 3 cut(s) 608, 689, 1571
EcoO109I RGGNCCY 1 cut(s) 1957
EcoRII CCWGG 2 cut(s) 627, 1667
EcoRV GATATC 1 cut(s) 2137
EcoT14I CCWWGG 1 cut(s) 157
ErhI CCWWGG 1 cut(s) 157
FalI AAGNNNNNCTT 2 cut(s) 1174, 1206
FaqI GGGAC 8 cut(s) 296, 713, 795, 914, 1299, 1408, 2240, 2308
FauI CCCGC 1 cut(s) 866
FauNDI CATATG 1 cut(s) 2214
FblI GTMKAC 2 cut(s) 450, 2001
Fnu4HI GCNGC 8 cut(s) 105, 1187, 1309, 1474, 2021, 2066, 2073, 2177
FokI GGATG 5 cut(s) 192, 669, 947, 1769, 2129
Fsp4HI GCNGC 8 cut(s) 105, 1187, 1309, 1474, 2021, 2066, 2073, 2177
FspBI CTAG 3 cut(s) 42, 158, 335
GlaI GCGC 2 cut(s) 1523, 1681
GluI GCNGC 8 cut(s) 105, 1187, 1309, 1474, 2021, 2066, 2073, 2177
GsaI CCCAGC 1 cut(s) 1506
HaeIII GGCC 6 cut(s) 156, 584, 801, 1507, 1600, 1958
HapII CCGG 4 cut(s) 506, 1132, 1885, 1917
HgaI GACGC 1 cut(s) 866
HhaI GCGC 2 cut(s) 1524, 1682
Hin1I GRCGYC 1 cut(s) 903
Hin6I GCGC 2 cut(s) 1522, 1680
HinP1I GCGC 2 cut(s) 1522, 1680
HincII GTYRAC 6 cut(s) 420, 451, 526, 792, 1153, 1783
HindII GTYRAC 6 cut(s) 420, 451, 526, 792, 1153, 1783
HindIII AAGCTT 1 cut(s) 1374
HinfI GANTC 8 cut(s) 885, 1535, 1613, 1644, 1768, 2054, 2060, 2111
HpaII CCGG 4 cut(s) 506, 1132, 1885, 1917
HphI GGTGA 1 cut(s) 617
Hpy188III TCNNGA 4 cut(s) 463, 866, 882, 1617
Hpy99I CGWCG 3 cut(s) 317, 455, 650
HpyAV CCTTC 9 cut(s) 29, 119, 317, 389, 629, 943, 1200, 1571, 1736
HpyCH4III ACNGT 8 cut(s) 217, 317, 373, 817, 1470, 1530, 1692, 2049
HpyCH4IV ACGT 7 cut(s) 295, 528, 622, 702, 903, 2004, 2124
HpyF10VI GCNNNNNNNGC 4 cut(s) 267, 482, 590, 1513
HpyF3I CTNAG 3 cut(s) 1089, 1533, 1871
HpySE526I ACGT 7 cut(s) 295, 528, 622, 702, 903, 2004, 2124
Hsp92I GRCGYC 1 cut(s) 903
HspAI GCGC 2 cut(s) 1522, 1680
Kzo9I GATC 4 cut(s) 201, 229, 1619, 1704
LguI GCTCTTC 1 cut(s) 824
LmnI GCTCC 3 cut(s) 1499, 1820, 2129
Lsp1109I GCAGC 8 cut(s) 116, 1198, 1320, 1485, 2032, 2077, 2084, 2188
LweI GCATC 6 cut(s) 270, 379, 508, 1204, 2107, 2290
MaeI CTAG 3 cut(s) 42, 158, 335
MaeII ACGT 7 cut(s) 295, 528, 622, 702, 903, 2004, 2124
MaeIII GTNAC 5 cut(s) 623, 1253, 1464, 1789, 2147
MalI GATC 4 cut(s) 203, 231, 1621, 1706
MbiI CCGCTC 1 cut(s) 2132
MboI GATC 4 cut(s) 201, 229, 1619, 1704
MboII GAAGA 7 cut(s) 411, 453, 662, 841, 856, 1949, 2231
MfeI CAATTG 3 cut(s) 408, 1588, 1947
MflI RGATCY 1 cut(s) 1619
MlyI GAGTC 4 cut(s) 1544, 1622, 2048, 2120
MmeI TCCRAC 5 cut(s) 804, 912, 1275, 1711, 2094
MroXI GAANNNNTTC 2 cut(s) 63, 1375
MseI TTAA 3 cut(s) 219, 1350, 2093
MslI CAYNNNNRTG 5 cut(s) 315, 818, 1422, 2171, 2286
MspI CCGG 4 cut(s) 506, 1132, 1885, 1917
MspR9I CCNGG 7 cut(s) 506, 507, 629, 1133, 1669, 1886, 1917
MunI CAATTG 3 cut(s) 408, 1588, 1947
Mva1269I GAATGC 2 cut(s) 875, 993
MvaI CCWGG 2 cut(s) 629, 1669
MwoI GCNNNNNNNGC 4 cut(s) 267, 482, 590, 1513
NciI CCSGG 5 cut(s) 506, 507, 1133, 1886, 1917
NdeI CATATG 1 cut(s) 2214
NdeII GATC 4 cut(s) 201, 229, 1619, 1704
NlaIV GGNNCC 1 cut(s) 1959
NmuCI GTSAC 5 cut(s) 623, 1253, 1464, 1789, 2147
NspI RCATGY 4 cut(s) 121, 961, 1277, 2020
NspV TTCGAA 2 cut(s) 67, 1379
OliI CACNNNNGTG 1 cut(s) 315
PagI TCATGA 1 cut(s) 865
PciI ACATGT 2 cut(s) 117, 1273
PciSI GCTCTTC 1 cut(s) 824
PctI GAATGC 2 cut(s) 875, 993
PdmI GAANNNNTTC 2 cut(s) 63, 1375
PfeI GAWTC 4 cut(s) 885, 1644, 1768, 2060
PflFI GACNNNGTC 3 cut(s) 692, 1787, 2259
PkrI GCNGC 8 cut(s) 106, 1188, 1310, 1475, 2022, 2067, 2074, 2178
PleI GAGTC 4 cut(s) 1543, 1621, 2048, 2119
PpsI GAGTC 4 cut(s) 1543, 1621, 2048, 2119
PscI ACATGT 2 cut(s) 117, 1273
PshAI GACNNNNGTC 2 cut(s) 861, 1291
Psp6I CCWGG 2 cut(s) 627, 1667
PspFI CCCAGC 1 cut(s) 1502
PspGI CCWGG 2 cut(s) 627, 1667
PspN4I GGNNCC 1 cut(s) 1959
PspPI GGNCC 6 cut(s) 582, 952, 1505, 1826, 1957, 2031
PstI CTGCAG 1 cut(s) 1223
PsuI RGATCY 1 cut(s) 1619
PsyI GACNNNGTC 3 cut(s) 692, 1787, 2259
RsaI GTAC 7 cut(s) 184, 195, 733, 1406, 1565, 1833, 2051
RsaNI GTAC 7 cut(s) 183, 194, 732, 1405, 1564, 1832, 2050
RseI CAYNNNNRTG 5 cut(s) 315, 818, 1422, 2171, 2286
Rsr2I CGGWCCG 1 cut(s) 2031
RsrII CGGWCCG 1 cut(s) 2031
SalI GTCGAC 1 cut(s) 449
SapI GCTCTTC 1 cut(s) 824
SaqAI TTAA 3 cut(s) 219, 1350, 2093
SatI GCNGC 8 cut(s) 105, 1187, 1309, 1474, 2021, 2066, 2073, 2177
Sau3AI GATC 4 cut(s) 201, 229, 1619, 1704
Sau96I GGNCC 6 cut(s) 582, 952, 1505, 1826, 1957, 2031
ScaI AGTACT 1 cut(s) 1833
SchI GAGTC 4 cut(s) 1544, 1622, 2048, 2120
ScrFI CCNGG 7 cut(s) 506, 507, 629, 1133, 1669, 1886, 1917
SfaNI GCATC 6 cut(s) 270, 379, 508, 1204, 2107, 2290
SfcI CTRYAG 2 cut(s) 1219, 1835
SfuI TTCGAA 2 cut(s) 67, 1379
SinI GGWCC 3 cut(s) 952, 1826, 2031
SmaI CCCGGG 1 cut(s) 507
SmiMI CAYNNNNRTG 5 cut(s) 315, 818, 1422, 2171, 2286
SmlI CTYRAG 1 cut(s) 1034
SmoI CTYRAG 1 cut(s) 1034
SspI AATATT 1 cut(s) 249
SspMI CTAG 3 cut(s) 42, 158, 335
StyD4I CCNGG 7 cut(s) 504, 505, 627, 1131, 1667, 1884, 1915
StyI CCWWGG 1 cut(s) 157
TaaI ACNGT 8 cut(s) 217, 317, 373, 817, 1470, 1530, 1692, 2049
TaiI ACGT 7 cut(s) 298, 531, 625, 705, 906, 2007, 2127
TaqI TCGA 7 cut(s) 53, 67, 450, 944, 985, 1379, 1707
TaqII GACCGA 2 cut(s) 1281, 2048
TatI WGTACW 3 cut(s) 731, 1404, 1831
TfiI GAWTC 4 cut(s) 885, 1644, 1768, 2060
Tru1I TTAA 3 cut(s) 219, 1350, 2093
Tru9I TTAA 3 cut(s) 219, 1350, 2093
TscAI CASTG 4 cut(s) 820, 1228, 1475, 1658
TseFI GTSAC 5 cut(s) 623, 1253, 1464, 1789, 2147
TseI GCWGC 8 cut(s) 104, 1186, 1308, 1473, 2020, 2065, 2072, 2176
Tsp45I GTSAC 5 cut(s) 623, 1253, 1464, 1789, 2147
TspDTI ATGAA 5 cut(s) 882, 962, 983, 1434, 1755
TspGWI ACGGA 3 cut(s) 200, 222, 2244
TspMI CCCGGG 1 cut(s) 505
TspRI CASTG 4 cut(s) 820, 1228, 1475, 1658
Tth111I GACNNNGTC 3 cut(s) 692, 1787, 2259
VpaK11BI GGWCC 3 cut(s) 952, 1826, 2031
XagI CCTNNNNNAGG 3 cut(s) 608, 689, 1571
XapI RAATTY 5 cut(s) 95, 998, 1073, 1127, 1963
XceI RCATGY 4 cut(s) 121, 961, 1277, 2020
XcmI CCANNNNNNNNNTGG 2 cut(s) 820, 1694
XmaI CCCGGG 1 cut(s) 505
XmaJI CCTAGG 1 cut(s) 157
XmiI GTMKAC 2 cut(s) 450, 2001
XmnI GAANNNNTTC 2 cut(s) 63, 1375
XspI CTAG 3 cut(s) 42, 158, 335
ZraI GACGTC 1 cut(s) 904
ZrmI AGTACT 1 cut(s) 1833
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.