Rh6BG076600

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
OG0000124
Physical Location & Seq
Forward (+)
11670875 .. 11686900
16026 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG076600.1

Sequence Viewer

Length: 1413 bp
ATGGATGCTGTCCGGGCCATAGGCCTAGGGTATACTTTACACCTAGGATGCACTGAGTTGGTACAACCGATCATTGAAGCGACTGTTAAATATGTTGATCCGTTGAATTACAAGATTTTGATTCACGGGATCGTATGCTACATAAATGGGGATGAATTTGGACGTGTAATGGGCATACACGATGGTGAAGAACCAATTGTTTTGGGGAATGGCAAAGGAGGAGAGGAGTATGGAACTGCGATTGGGCCAATGTGTGATGGGGAAGGAAGAATCACAGTTGAACAGTTGATTTACATAGTCAGTAAACGAAGAGAGGTGGATGACACTTTCAAGATAGCTTTTGCAATGTTGGCACTGACTTGTGTGATTTGCCCGGGAATAGACGATGCGGTAGATGTGGGAATGTTGCTGCCACTGATGGATACAACACGAATAGTTCGTAAAAATTGGGCCTCATTTGCCGTTAATCGGTTAATGGGGGGTGTGAAAAGGCACAGGGAGGAAGGAACATCCGTGGTGGGGGGATGTATTATATTTCTTCAACTTCTATACCTTGACAAGGGTCAAAAAAACGATATGGAATATGTGGATGTGGGAGTTGGGTCGGACATTTCATGCACCCCAACAGGAAAACAGTTATTGGGAAAGGATAAAAATTTATGTACGGCAGACACAATCCGGACTGGTTTGAAGCGAAGTCATGCGAATGCAATGTACGGTCATTTTAGTGAATATGAGAGATTATGCTTGGGAATTTGTGGAGATGGGGCTAATTCAATTTGCCGCGACGAGATTAATTGTTTGCTACCGAGGAAAAATGTATCAGGAAGTGTGATTAATTATGTGGTGGCGTACCTAAATAAGGAAGGACTCAGCAATTGGTATTGGTCAACGCATTTTGAGTCGATATCTCAATGTTCGGAGGGTAAAAGATTCATGCAATGGGTGGCGCATACCAGGAGAGTCTGCAGCCTCCAAAGGTTTGACGGTAGAATTGACAGTTGTGAGAGGATATTTATGCCTGTGCATGAGGGTTCACTGAAGGATGGCCATTGGATTCTCATTGTGGTTGACATGATCAAAAAGGTTGCAGAAGTATGGGATAGCGGACCGGGCACGGTACTTAAGACATCCATAATGGATAACATTTCACAACTGTACGACTCAGACACGCAGAGATCGACCATATTAATGGATTGTTTAACAGGCCCTAATAACGAGTTGGATGCAAATTTACGAAGGAGTATCATAAATAATAAAAATGGGGGTGAGAATGAAGCGACGGCATCTGAAGGTTCCCAGAAGAAGCGACAACATCAATTGAGGGAAGAATGGGAAGAAATAGAGGAAGGGCAGTATTGGCGCCTACCTGGAGGAATGCGACCACATCTCAATAATGAGGATGGGAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
HMG_box

Protein Analysis

470

Amino Acids

52.43

Weight (kDa)

5.56

Isoelectric Point (pI)

34.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000124)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g10992 FvH4_2g25150 FvH4_2g27910 FvH4_2g27931 FvH4_4g09443 FvH4_4g09490 FvH4_4g15990 FvH4_4g15991 FvH4_6g07180 FvH4_6g40320 FvH4_7g10222 FvH4_7g10251
rosa_chinensis RchiOBHm_Chr2g0155611
rosa_laevigata RLG00000009253 RLG00000009254 RLG00000011848 RLG00000017301 RLG00000017302 RLG00000034909
rosa_multiflora Rmu_co8063658.1_g000001 Rmu_co8240443.1_g000001 Rmu_co8264451.1_g000001 Rmu_co8381937.1_g000001 Rmu_co8419903.1_g000001 Rmu_co8513405.1_g000002 Rmu_co8522915.1_g000001 Rmu_co8522915.1_g000004 Rmu_sc0000279.1_g000024 Rmu_sc0000279.1_g000048 Rmu_sc0000642.1_g000017 Rmu_sc0002045.1_g000015 Rmu_sc0002045.1_g000018 Rmu_sc0002045.1_g000023 Rmu_sc0002045.1_g000028 Rmu_sc0003047.1_g000008 Rmu_sc0003179.1_g000019 Rmu_sc0003179.1_g000020 Rmu_sc0003179.1_g000022 Rmu_sc0003179.1_g000023 Rmu_sc0003422.1_g000011 Rmu_sc0004999.1_g000014 Rmu_sc0005712.1_g000018 Rmu_sc0005712.1_g000023 Rmu_sc0006198.1_g000019 Rmu_sc0006373.1_g000005 Rmu_sc0006514.1_g000028 Rmu_sc0006514.1_g000031 Rmu_sc0007367.1_g000010 Rmu_sc0011475.1_g000002 Rmu_sc0025304.1_g000001 Rmu_ssc0000161.1_g000030 Rmu_ssc0000161.1_g000032 Rmu_ssc0000387.1_g000018
rosa_roxburghii Rroxscaffold_1G00031090 Rroxscaffold_1G00032770 Rroxscaffold_1G00068950 Rroxscaffold_1G00069000 Rroxscaffold_1G00069010 Rroxscaffold_2G00129060 Rroxscaffold_2G00129100 Rroxscaffold_4G00309310 Rroxscaffold_4G00309320 Rroxscaffold_5G00350620 Rroxscaffold_5G00350630 Rroxscaffold_7G00162650 Rroxscaffold_7G00162660 Rroxscaffold_7G00162710
rosa_rugosa Rorug02G0564700 Rorug02G0564700 Rorug03G0343100 Rorug04G0189700 Rorug05G0102800 Rorug05G0102900 Rorug05G0103000 Rorug05G0106500 Rorug05G0106600 Rorug05G0106700 Rorug05G0252800 Rorug07G0182100 Rorug07G0283500 Rorug07G0283600
rosa_samantha Rh1AG004000 Rh1AG004100 Rh1AG004200 Rh1AG004400 Rh1AG004500 Rh1AG004600 Rh1AG004800 Rh1AG004900 Rh1AG005300 Rh1AG007000 Rh1AG115000 Rh1CG049400 Rh1CG055400 Rh1CG111000 Rh1DG053600 Rh1DG053700 Rh1DG059300 Rh1DG119700 Rh1DG177100 Rh1DG177200 Rh2AG353800 Rh2AG354000 Rh2AG354100 Rh2AG354300 Rh2AG354400 Rh2AG354500 Rh2AG354600 Rh2AG354700 Rh2AG642300 Rh2AG642400 Rh2AG642500 Rh2BG336500 Rh2BG336600 Rh2BG336700 Rh2BG336800 Rh2BG336900 Rh2CG299900 Rh2CG300000 Rh2CG300100 Rh2DG337000 Rh2DG337100 Rh3AG246600 Rh3BG121900 Rh3BG122300 Rh3BG122600 Rh3BG122700 Rh3DG304800 Rh3DG304900 Rh4AG148800 Rh4AG249000 Rh4AG249100 Rh4AG249200 Rh4BG182700 Rh4BG182800 Rh4BG182900 Rh4BG254400 Rh4BG254500 Rh4BG254600 Rh4CG155500 Rh4CG155700 Rh4DG057900 Rh4DG058000 Rh4DG058100 Rh4DG058200 Rh4DG129100 Rh5AG364500 Rh5AG364600 Rh5AG364800 Rh5AG365300 Rh5CG363700 Rh5CG497600 Rh5DG239500 Rh5DG239600 Rh6AG173500 Rh6AG175400 Rh6BG075900 Rh6BG076300 Rh6BG076400 Rh6BG076500 Rh6BG076600 Rh6CG151000 Rh6CG151200 Rh6CG151300 Rh6CG151400 Rh6CG205200 Rh6CG205300 Rh6CG419700 Rh6CG419900 Rh6CG420100 Rh6DG498700 Rh6DG498800 Rh7AG329000 Rh7AG329100 Rh7AG329300 Rh7AG329400 Rh7AG353000 Rh7AG353100 Rh7AG353300 Rh7AG353400 Rh7AG353500 Rh7CG346400 Rh7CG346500 Rh7CG346700 Rh7CG370800 Rh7CG370900 Rh7CG371000 Rh7CG371100 Rh7DG325000 Rh7DG325100 Rh7DG325200 Rh7DG325300 Rh7DG353100 Rh7DG353200 Rh7DG353300 Rh7DG363500 Rh7DG364000
rosa_wichuraiana Rw0G002290 Rw0G012780 Rw1G000260 Rw1G000270 Rw1G010400 Rw1G010410 Rw1G010420 Rw1G010430 Rw1G010440 Rw2G003210 Rw2G003220 Rw4G010970 Rw5G048520 Rw6G013320 Rw6G013470 Rw6G014940 Rw6G016570 Rw6G016590 Rw6G016600 Rw6G016610 Rw6G016620 Rw6G035450 Rw7G027760 Rw7G030460

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1362
AccI GTMKAC 1 cut(s) 32
AccII CGCG 1 cut(s) 786
AccIII TCCGGA 1 cut(s) 678
AciI CCGC 3 cut(s) 389, 784, 1107
AclWI GGATC 2 cut(s) 92, 137
AcoI YGGCCR 1 cut(s) 1048
AcsI RAATTY 4 cut(s) 155, 655, 753, 1231
AcuI CTGAAG 2 cut(s) 1061, 1311
AcyI GRCGYC 1 cut(s) 1363
AfaI GTAC 6 cut(s) 63, 664, 716, 854, 1122, 1160
AfiI CCNNNNNNNGG 4 cut(s) 468, 519, 559, 862
AflII CTTAAG 1 cut(s) 1124
AflIII ACRYGT 1 cut(s) 163
AgsI TTSAA 7 cut(s) 77, 106, 281, 331, 542, 691, 777
AjiI CACGTC 1 cut(s) 164
AjnI CCWGG 2 cut(s) 956, 1369
AleI CACNNNNGTG 1 cut(s) 183
AluBI AGCT 1 cut(s) 338
AluI AGCT 1 cut(s) 338
AlwI GGATC 2 cut(s) 92, 137
Ama87I CYCGRG 1 cut(s) 373
Aor13HI TCCGGA 1 cut(s) 678
AoxI GGCC 6 cut(s) 15, 22, 245, 450, 1048, 1207
ApeKI GCWGC 2 cut(s) 409, 969
ApoI RAATTY 4 cut(s) 155, 655, 753, 1231
AseI ATTAAT 3 cut(s) 795, 837, 1190
AspA2I CCTAGG 2 cut(s) 25, 43
AspLEI GCGC 2 cut(s) 952, 1365
AspS9I GGNCC 5 cut(s) 15, 245, 450, 1109, 1208
AsuC2I CCSGG 4 cut(s) 14, 374, 375, 1113
AsuHPI GGTGA 2 cut(s) 197, 1280
AvaI CYCGRG 1 cut(s) 373
AvaII GGWCC 1 cut(s) 1109
AvrII CCTAGG 2 cut(s) 25, 43
BaeGI GKGCMC 1 cut(s) 1118
BalI TGGCCA 1 cut(s) 1050
BanI GGYRCC 1 cut(s) 1362
BbvI GCAGC 2 cut(s) 396, 981
BccI CCATC 6 cut(s) 176, 251, 412, 758, 1040, 1397
BceAI ACGGC 3 cut(s) 446, 681, 1299
BcgI CGANNNNNNTGC 2 cut(s) 1208, 1242
BciT130I CCWGG 2 cut(s) 958, 1371
BciVI GTATCC 1 cut(s) 415
BclI TGATCA 1 cut(s) 1077
BcnI CCSGG 4 cut(s) 14, 374, 375, 1113
BfaI CTAG 2 cut(s) 26, 44
BfmI CTRYAG 1 cut(s) 967
BfoI RGCGCY 1 cut(s) 1366
BfrI CTTAAG 1 cut(s) 1124
BfuI GTATCC 1 cut(s) 415
BisI GCNGC 3 cut(s) 410, 784, 970
BlnI CCTAGG 2 cut(s) 25, 43
BlsI GCNGC 3 cut(s) 411, 785, 971
Bme1390I CCNGG 6 cut(s) 14, 374, 375, 958, 1113, 1371
Bme18I GGWCC 1 cut(s) 1109
BmeT110I CYCGRG 1 cut(s) 373
BmgBI CACGTC 1 cut(s) 164
BmgT120I GGNCC 5 cut(s) 15, 245, 450, 1109, 1208
BmiI GGNNCC 2 cut(s) 1297, 1364
BmrFI CCNGG 6 cut(s) 14, 374, 375, 958, 1113, 1371
BmsI GCATC 4 cut(s) 38, 376, 1216, 1295
BoxI GACNNNNGTC 1 cut(s) 561
BpmI CTGGAG 1 cut(s) 1392
BpuMI CCSGG 4 cut(s) 14, 374, 375, 1113
BsaHI GRCGYC 1 cut(s) 1363
BsaJI CCNNGG 5 cut(s) 25, 43, 373, 513, 809
BsaWI WCCGGW 1 cut(s) 678
Bsc4I CCNNNNNNNGG 4 cut(s) 468, 519, 559, 862
Bse1I ACTGG 1 cut(s) 688
Bse3DI GCAATG 3 cut(s) 351, 717, 947
BseAI TCCGGA 1 cut(s) 678
BseBI CCWGG 2 cut(s) 958, 1371
BseDI CCNNGG 5 cut(s) 25, 43, 373, 513, 809
BseLI CCNNNNNNNGG 4 cut(s) 468, 519, 559, 862
BseMI GCAATG 3 cut(s) 351, 717, 947
BseMII CTCAG 3 cut(s) 45, 886, 1179
BseNI ACTGG 1 cut(s) 688
BseRI GAGGAG 2 cut(s) 234, 239
BseSI GKGCMC 1 cut(s) 1118
BseXI GCAGC 2 cut(s) 396, 981
Bsh1236I CGCG 1 cut(s) 786
BshFI GGCC 6 cut(s) 17, 24, 247, 452, 1050, 1209
BshNI GGYRCC 1 cut(s) 1362
BsiHKCI CYCGRG 1 cut(s) 373
BsiSI CCGG 4 cut(s) 13, 374, 679, 1112
BslI CCNNNNNNNGG 4 cut(s) 468, 519, 559, 862
BsmI GAATGC 2 cut(s) 712, 1383
BsnI GGCC 6 cut(s) 17, 24, 247, 452, 1050, 1209
BsoBI CYCGRG 1 cut(s) 373
Bsp1286I GDGCHC 1 cut(s) 1118
Bsp13I TCCGGA 1 cut(s) 678
Bsp143I GATC 5 cut(s) 69, 97, 129, 1077, 1178
BspACI CCGC 3 cut(s) 389, 784, 1107
BspANI GGCC 6 cut(s) 17, 24, 247, 452, 1050, 1209
BspCNI CTCAG 3 cut(s) 46, 885, 1178
BspEI TCCGGA 1 cut(s) 678
BspFNI CGCG 1 cut(s) 786
BspLI GGNNCC 2 cut(s) 1297, 1364
BspMAI CTGCAG 1 cut(s) 971
BspPI GGATC 2 cut(s) 92, 137
BspT107I GGYRCC 1 cut(s) 1362
BspTI CTTAAG 1 cut(s) 1124
BsrDI GCAATG 3 cut(s) 351, 717, 947
BsrI ACTGG 1 cut(s) 688
BssECI CCNNGG 5 cut(s) 25, 43, 373, 513, 809
BssMI GATC 5 cut(s) 69, 97, 129, 1077, 1178
BssNAI GTATAC 1 cut(s) 33
BssNI GRCGYC 1 cut(s) 1363
BssT1I CCWWGG 2 cut(s) 25, 43
Bst1107I GTATAC 1 cut(s) 33
Bst2UI CCWGG 2 cut(s) 958, 1371
Bst4CI ACNGT 9 cut(s) 85, 277, 285, 636, 719, 989, 1001, 1120, 1158
Bst6I CTCTTC 1 cut(s) 304
BstACI GRCGYC 1 cut(s) 1363
BstAFI CTTAAG 1 cut(s) 1124
BstDEI CTNAG 3 cut(s) 54, 872, 1165
BstDSI CCRYGG 1 cut(s) 513
BstENI CCTNNNNNAGG 2 cut(s) 557, 860
BstFNI CGCG 1 cut(s) 786
BstH2I RGCGCY 1 cut(s) 1366
BstHHI GCGC 2 cut(s) 952, 1365
BstKTI GATC 5 cut(s) 72, 100, 132, 1080, 1181
BstMBI GATC 5 cut(s) 69, 97, 129, 1077, 1178
BstMWI GCNNNNNNNGC 5 cut(s) 14, 350, 458, 1113, 1360
BstNI CCWGG 2 cut(s) 958, 1371
BstPAI GACNNNNGTC 1 cut(s) 561
BstSCI CCNGG 6 cut(s) 12, 372, 373, 956, 1111, 1369
BstSFI CTRYAG 1 cut(s) 967
BstSLI GKGCMC 1 cut(s) 1118
BstUI CGCG 1 cut(s) 786
BstV1I GCAGC 2 cut(s) 396, 981
BstXI CCANNNNNNTGG 1 cut(s) 1192
BstZ17I GTATAC 1 cut(s) 33
BsuI GTATCC 1 cut(s) 415
BsuRI GGCC 6 cut(s) 17, 24, 247, 452, 1050, 1209
BtgI CCRYGG 1 cut(s) 513
BtrI CACGTC 1 cut(s) 164
BtsIMutI CAGTG 4 cut(s) 51, 353, 413, 1037
CfoI GCGC 2 cut(s) 952, 1365
Cfr13I GGNCC 5 cut(s) 15, 245, 450, 1109, 1208
Cfr9I CCCGGG 1 cut(s) 373
CpoI CGGWCCG 1 cut(s) 1109
Csp6I GTAC 6 cut(s) 62, 663, 715, 853, 1121, 1159
CspI CGGWCCG 1 cut(s) 1109
CviAII CATG 5 cut(s) 615, 701, 937, 1028, 1075
CviJI RGCY 9 cut(s) 17, 24, 247, 338, 452, 770, 972, 1050, 1209
CviKI_1 RGCY 9 cut(s) 17, 24, 247, 338, 452, 770, 972, 1050, 1209
CviQI GTAC 6 cut(s) 62, 663, 715, 853, 1121, 1159
DdeI CTNAG 3 cut(s) 54, 872, 1165
DinI GGCGCC 1 cut(s) 1364
DpnI GATC 5 cut(s) 71, 99, 131, 1079, 1180
DpnII GATC 5 cut(s) 69, 97, 129, 1077, 1178
EaeI YGGCCR 1 cut(s) 1048
Eam1104I CTCTTC 1 cut(s) 304
EarI CTCTTC 1 cut(s) 304
Eco130I CCWWGG 2 cut(s) 25, 43
Eco147I AGGCCT 1 cut(s) 24
Eco32I GATATC 1 cut(s) 909
Eco47I GGWCC 1 cut(s) 1109
Eco57I CTGAAG 2 cut(s) 1061, 1311
Eco88I CYCGRG 1 cut(s) 373
EcoNI CCTNNNNNAGG 2 cut(s) 557, 860
EcoO109I RGGNCCY 1 cut(s) 1208
EcoRII CCWGG 2 cut(s) 956, 1369
EcoRV GATATC 1 cut(s) 909
EcoT14I CCWWGG 2 cut(s) 25, 43
EgeI GGCGCC 1 cut(s) 1364
EheI GGCGCC 1 cut(s) 1364
ErhI CCWWGG 2 cut(s) 25, 43
FaeI CATG 5 cut(s) 618, 704, 940, 1031, 1078
FatI CATG 5 cut(s) 614, 700, 936, 1027, 1074
FbaI TGATCA 1 cut(s) 1077
FblI GTMKAC 1 cut(s) 32
Fnu4HI GCNGC 3 cut(s) 410, 784, 970
Fsp4HI GCNGC 3 cut(s) 410, 784, 970
FspBI CTAG 2 cut(s) 26, 44
GlaI GCGC 2 cut(s) 951, 1364
GluI GCNGC 3 cut(s) 410, 784, 970
GsuI CTGGAG 1 cut(s) 1392
HaeII RGCGCY 1 cut(s) 1366
HaeIII GGCC 6 cut(s) 17, 24, 247, 452, 1050, 1209
HapII CCGG 4 cut(s) 13, 374, 679, 1112
HhaI GCGC 2 cut(s) 952, 1365
Hin1I GRCGYC 1 cut(s) 1363
Hin1II CATG 5 cut(s) 618, 704, 940, 1031, 1078
Hin6I GCGC 2 cut(s) 950, 1363
HinP1I GCGC 2 cut(s) 950, 1363
HincII GTYRAC 2 cut(s) 891, 1072
HindII GTYRAC 2 cut(s) 891, 1072
HinfI GANTC 8 cut(s) 121, 270, 870, 902, 933, 963, 1057, 1163
HpaII CCGG 4 cut(s) 13, 374, 679, 1112
HphI GGTGA 2 cut(s) 197, 1280
Hpy166II GTNNAC 5 cut(s) 33, 305, 891, 1037, 1072
Hpy188I TCNGA 4 cut(s) 607, 922, 1168, 1291
Hpy188III TCNNGA 3 cut(s) 331, 679, 825
Hpy8I GTNNAC 5 cut(s) 33, 305, 891, 1037, 1072
Hpy99I CGWCG 2 cut(s) 791, 1285
HpyAV CCTTC 7 cut(s) 257, 497, 860, 1036, 1233, 1286, 1343
HpyCH4III ACNGT 9 cut(s) 85, 277, 285, 636, 719, 989, 1001, 1120, 1158
HpyCH4IV ACGT 1 cut(s) 163
HpyCH4V TGCA 9 cut(s) 51, 344, 618, 710, 940, 969, 1027, 1091, 1229
HpyF10VI GCNNNNNNNGC 5 cut(s) 14, 350, 458, 1113, 1360
HpyF3I CTNAG 3 cut(s) 54, 872, 1165
HpySE526I ACGT 1 cut(s) 163
Hsp92I GRCGYC 1 cut(s) 1363
Hsp92II CATG 5 cut(s) 618, 704, 940, 1031, 1078
HspAI GCGC 2 cut(s) 950, 1363
KasI GGCGCC 1 cut(s) 1362
Kpn2I TCCGGA 1 cut(s) 678
Ksp22I TGATCA 1 cut(s) 1077
Kzo9I GATC 5 cut(s) 69, 97, 129, 1077, 1178
Lsp1109I GCAGC 2 cut(s) 396, 981
LweI GCATC 4 cut(s) 38, 376, 1216, 1295
MaeI CTAG 2 cut(s) 26, 44
MaeII ACGT 1 cut(s) 163
MalI GATC 5 cut(s) 71, 99, 131, 1079, 1180
MboI GATC 5 cut(s) 69, 97, 129, 1077, 1178
MboII GAAGA 7 cut(s) 200, 279, 321, 530, 1315, 1340, 1349
MfeI CAATTG 3 cut(s) 195, 877, 1319
MhlI GDGCHC 1 cut(s) 1118
MlsI TGGCCA 1 cut(s) 1050
MluNI TGGCCA 1 cut(s) 1050
Mly113I GGCGCC 1 cut(s) 1363
MlyI GAGTC 4 cut(s) 864, 911, 972, 1157
MmeI TCCRAC 2 cut(s) 585, 1203
Mox20I TGGCCA 1 cut(s) 1050
MroI TCCGGA 1 cut(s) 678
MscI TGGCCA 1 cut(s) 1050
MseI TTAA 8 cut(s) 87, 465, 473, 795, 837, 1125, 1190, 1202
MslI CAYNNNNRTG 4 cut(s) 183, 705, 726, 1190
Msp20I TGGCCA 1 cut(s) 1050
MspCI CTTAAG 1 cut(s) 1124
MspI CCGG 4 cut(s) 13, 374, 679, 1112
MspR9I CCNGG 6 cut(s) 14, 374, 375, 958, 1113, 1371
MunI CAATTG 3 cut(s) 195, 877, 1319
Mva1269I GAATGC 2 cut(s) 712, 1383
MvaI CCWGG 2 cut(s) 958, 1371
MvnI CGCG 1 cut(s) 786
MwoI GCNNNNNNNGC 5 cut(s) 14, 350, 458, 1113, 1360
NarI GGCGCC 1 cut(s) 1363
NciI CCSGG 4 cut(s) 14, 374, 375, 1113
NdeII GATC 5 cut(s) 69, 97, 129, 1077, 1178
NlaIII CATG 5 cut(s) 618, 704, 940, 1031, 1078
NlaIV GGNNCC 2 cut(s) 1297, 1364
OliI CACNNNNGTG 1 cut(s) 183
PceI AGGCCT 1 cut(s) 24
PcsI WCGNNNNNNNCGW 2 cut(s) 436, 1178
PctI GAATGC 2 cut(s) 712, 1383
PfeI GAWTC 4 cut(s) 121, 270, 933, 1057
PkrI GCNGC 3 cut(s) 411, 785, 971
PleI GAGTC 4 cut(s) 864, 910, 971, 1157
PluTI GGCGCC 1 cut(s) 1366
PpsI GAGTC 4 cut(s) 864, 910, 971, 1157
PshAI GACNNNNGTC 1 cut(s) 561
PshBI ATTAAT 3 cut(s) 795, 837, 1190
Psp6I CCWGG 2 cut(s) 956, 1369
PspGI CCWGG 2 cut(s) 956, 1369
PspN4I GGNNCC 2 cut(s) 1297, 1364
PspPI GGNCC 5 cut(s) 15, 245, 450, 1109, 1208
PstI CTGCAG 1 cut(s) 971
RsaI GTAC 6 cut(s) 63, 664, 716, 854, 1122, 1160
RsaNI GTAC 6 cut(s) 62, 663, 715, 853, 1121, 1159
RseI CAYNNNNRTG 4 cut(s) 183, 705, 726, 1190
Rsr2I CGGWCCG 1 cut(s) 1109
RsrII CGGWCCG 1 cut(s) 1109
SaqAI TTAA 8 cut(s) 87, 465, 473, 795, 837, 1125, 1190, 1202
SatI GCNGC 3 cut(s) 410, 784, 970
Sau3AI GATC 5 cut(s) 69, 97, 129, 1077, 1178
Sau96I GGNCC 5 cut(s) 15, 245, 450, 1109, 1208
SchI GAGTC 4 cut(s) 864, 911, 972, 1157
ScrFI CCNGG 6 cut(s) 14, 374, 375, 958, 1113, 1371
SduI GDGCHC 1 cut(s) 1118
SfaNI GCATC 4 cut(s) 38, 376, 1216, 1295
SfcI CTRYAG 1 cut(s) 967
SfoI GGCGCC 1 cut(s) 1364
SinI GGWCC 1 cut(s) 1109
SmaI CCCGGG 1 cut(s) 375
SmiMI CAYNNNNRTG 4 cut(s) 183, 705, 726, 1190
SmlI CTYRAG 1 cut(s) 1124
SmoI CTYRAG 1 cut(s) 1124
SseBI AGGCCT 1 cut(s) 24
SsiI CCGC 3 cut(s) 389, 784, 1107
SspDI GGCGCC 1 cut(s) 1362
SspMI CTAG 2 cut(s) 26, 44
StuI AGGCCT 1 cut(s) 24
StyD4I CCNGG 6 cut(s) 12, 372, 373, 956, 1111, 1369
StyI CCWWGG 2 cut(s) 25, 43
TaaI ACNGT 9 cut(s) 85, 277, 285, 636, 719, 989, 1001, 1120, 1158
TaiI ACGT 1 cut(s) 166
TaqI TCGA 2 cut(s) 905, 1181
TauI GCSGC 1 cut(s) 786
TfiI GAWTC 4 cut(s) 121, 270, 933, 1057
Tru1I TTAA 8 cut(s) 87, 465, 473, 795, 837, 1125, 1190, 1202
Tru9I TTAA 8 cut(s) 87, 465, 473, 795, 837, 1125, 1190, 1202
TscAI CASTG 4 cut(s) 58, 360, 420, 1044
TseI GCWGC 2 cut(s) 409, 969
TspDTI ATGAA 4 cut(s) 168, 603, 925, 1290
TspGWI ACGGA 2 cut(s) 90, 502
TspMI CCCGGG 1 cut(s) 373
TspRI CASTG 4 cut(s) 58, 360, 420, 1044
Vha464I CTTAAG 1 cut(s) 1124
VpaK11BI GGWCC 1 cut(s) 1109
VspI ATTAAT 3 cut(s) 795, 837, 1190
XagI CCTNNNNNAGG 2 cut(s) 557, 860
XapI RAATTY 4 cut(s) 155, 655, 753, 1231
XmaI CCCGGG 1 cut(s) 373
XmaJI CCTAGG 2 cut(s) 25, 43
XmiI GTMKAC 1 cut(s) 32
XspI CTAG 2 cut(s) 26, 44
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.