FvH4_7g10222

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0000124
Physical Location & Seq
Forward (+)
9693269 .. 9694805
1537 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g10222.t1

Sequence Viewer

Length: 1305 bp
ATGGTCAACCGAATGTCCAAGGCTAAGAGGGTATTGGTAGGGTATATCGGATTTGGAACTACTGTTAACGTTGGTTGCTGCCGTGTCGTCCCGTCGATTTTCCAACTGATGGTCGGAAAAATTGACATCGACGAAGGAAGTGTGTGGCTGAACGGTAGGAAGCATTTCGTCAACCACGTTGAGGTTTCACGTGTCCTAGGACTAGAAGACGGTGGTGAGGCTATTCAGTTAGGAGAGGGCATACTCCCTGCAGAGTACGGAGAGATCGTCAGTCCTCTGTTGGACGCGGGTGGGAATATATCATTCGGTAATGTCAGCTGGGTGGTAAGTGATCGACCGGAGGCGGACGCCATTTTCGCAGTGGCATACGGGTTGCTGGCCCTAACGTGTTTTATTTGTCCTGGTAACTCGACAGAGATCGACCTAGCGATGTTGAAACCCCTCATCGATGTGGACAGAATAAGCTGTAAAAACTGGGCCACCTTTGCAATTGAACGACTGTTTAGGGGGATAATGATGCATAGAGAGACTGGGATGCTTGTCGTGGAGGGGAGTGCAATCTTTTTACAGGTGCTTTACTGTGAGTTGCTTGTGGAGAGGGTTGAGGGTACGGAGCGCCGGAGGAATCCATTAATGGCCTGGAATACGGAGGCTATTAGCAACCTCTTAGCCAAAGTGGTTGCAGGTCCGCAAGAGAGAGAGGTGAACAATGAGACGATCGTTTCCGAAGACGATTCGGTTGGGTATCCGCTGCAGCACGCTGTGCACAGAGATATTTTTGGTTGCTTGGTTAAGGTCGAGGAAGCGCATAAACAGATGGGTGTTCTGATCAACTTAGCGGGCGAATTCCCAAAGCAAATAGCTATTCTGACCAACCAAGTATTGAAACTGACGGAAGAAGTCTGCAATTTTCGACCACGGTTGAAAGACAATGTGCGGGAATTATATAGAACCGGACGTCTTAATAAGGGAGTAGGATCATGCTCCACGGAGGAGGTTCAAAGGGACATACCGCACTGCCAGCATTCGATGCCCCAGGGTGCTATGTCAAATTCAAGCAGATTTGTGGAAGGTGTACCGCATATTATGAACATGTGTCCTAGTAACAACAATACACCAAACAACGGTAAGCGATCGGCGGCTGAAGCATTTGGGGACTCTAATGAGGAAGATCAACTTTACATGCGTAAACTAATGGGATGCACGGCGGGGCCGTACGGTGAGGTTGGGTTCCGCGGGGCAATATTTCGTAGGTCCATACCAACTAAGATATCGGCTGAGCAAGGAGGAAGGGAGAATTATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
HMG_box

Protein Analysis

435

Amino Acids

47.91

Weight (kDa)

5.82

Isoelectric Point (pI)

39.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000124)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g10992 FvH4_2g25150 FvH4_2g27910 FvH4_2g27931 FvH4_4g09443 FvH4_4g09490 FvH4_4g15990 FvH4_4g15991 FvH4_6g07180 FvH4_6g40320 FvH4_7g10222 FvH4_7g10251
rosa_chinensis RchiOBHm_Chr2g0155611
rosa_laevigata RLG00000009253 RLG00000009254 RLG00000011848 RLG00000017301 RLG00000017302 RLG00000034909
rosa_multiflora Rmu_co8063658.1_g000001 Rmu_co8240443.1_g000001 Rmu_co8264451.1_g000001 Rmu_co8381937.1_g000001 Rmu_co8419903.1_g000001 Rmu_co8513405.1_g000002 Rmu_co8522915.1_g000001 Rmu_co8522915.1_g000004 Rmu_sc0000279.1_g000024 Rmu_sc0000279.1_g000048 Rmu_sc0000642.1_g000017 Rmu_sc0002045.1_g000015 Rmu_sc0002045.1_g000018 Rmu_sc0002045.1_g000023 Rmu_sc0002045.1_g000028 Rmu_sc0003047.1_g000008 Rmu_sc0003179.1_g000019 Rmu_sc0003179.1_g000020 Rmu_sc0003179.1_g000022 Rmu_sc0003179.1_g000023 Rmu_sc0003422.1_g000011 Rmu_sc0004999.1_g000014 Rmu_sc0005712.1_g000018 Rmu_sc0005712.1_g000023 Rmu_sc0006198.1_g000019 Rmu_sc0006373.1_g000005 Rmu_sc0006514.1_g000028 Rmu_sc0006514.1_g000031 Rmu_sc0007367.1_g000010 Rmu_sc0011475.1_g000002 Rmu_sc0025304.1_g000001 Rmu_ssc0000161.1_g000030 Rmu_ssc0000161.1_g000032 Rmu_ssc0000387.1_g000018
rosa_roxburghii Rroxscaffold_1G00031090 Rroxscaffold_1G00032770 Rroxscaffold_1G00068950 Rroxscaffold_1G00069000 Rroxscaffold_1G00069010 Rroxscaffold_2G00129060 Rroxscaffold_2G00129100 Rroxscaffold_4G00309310 Rroxscaffold_4G00309320 Rroxscaffold_5G00350620 Rroxscaffold_5G00350630 Rroxscaffold_7G00162650 Rroxscaffold_7G00162660 Rroxscaffold_7G00162710
rosa_rugosa Rorug02G0564700 Rorug02G0564700 Rorug03G0343100 Rorug04G0189700 Rorug05G0102800 Rorug05G0102900 Rorug05G0103000 Rorug05G0106500 Rorug05G0106600 Rorug05G0106700 Rorug05G0252800 Rorug07G0182100 Rorug07G0283500 Rorug07G0283600
rosa_samantha Rh1AG004000 Rh1AG004100 Rh1AG004200 Rh1AG004400 Rh1AG004500 Rh1AG004600 Rh1AG004800 Rh1AG004900 Rh1AG005300 Rh1AG007000 Rh1AG115000 Rh1CG049400 Rh1CG055400 Rh1CG111000 Rh1DG053600 Rh1DG053700 Rh1DG059300 Rh1DG119700 Rh1DG177100 Rh1DG177200 Rh2AG353800 Rh2AG354000 Rh2AG354100 Rh2AG354300 Rh2AG354400 Rh2AG354500 Rh2AG354600 Rh2AG354700 Rh2AG642300 Rh2AG642400 Rh2AG642500 Rh2BG336500 Rh2BG336600 Rh2BG336700 Rh2BG336800 Rh2BG336900 Rh2CG299900 Rh2CG300000 Rh2CG300100 Rh2DG337000 Rh2DG337100 Rh3AG246600 Rh3BG121900 Rh3BG122300 Rh3BG122600 Rh3BG122700 Rh3DG304800 Rh3DG304900 Rh4AG148800 Rh4AG249000 Rh4AG249100 Rh4AG249200 Rh4BG182700 Rh4BG182800 Rh4BG182900 Rh4BG254400 Rh4BG254500 Rh4BG254600 Rh4CG155500 Rh4CG155700 Rh4DG057900 Rh4DG058000 Rh4DG058100 Rh4DG058200 Rh4DG129100 Rh5AG364500 Rh5AG364600 Rh5AG364800 Rh5AG365300 Rh5CG363700 Rh5CG497600 Rh5DG239500 Rh5DG239600 Rh6AG173500 Rh6AG175400 Rh6BG075900 Rh6BG076300 Rh6BG076400 Rh6BG076500 Rh6BG076600 Rh6CG151000 Rh6CG151200 Rh6CG151300 Rh6CG151400 Rh6CG205200 Rh6CG205300 Rh6CG419700 Rh6CG419900 Rh6CG420100 Rh6DG498700 Rh6DG498800 Rh7AG329000 Rh7AG329100 Rh7AG329300 Rh7AG329400 Rh7AG353000 Rh7AG353100 Rh7AG353300 Rh7AG353400 Rh7AG353500 Rh7CG346400 Rh7CG346500 Rh7CG346700 Rh7CG370800 Rh7CG370900 Rh7CG371000 Rh7CG371100 Rh7DG325000 Rh7DG325100 Rh7DG325200 Rh7DG325300 Rh7DG353100 Rh7DG353200 Rh7DG353300 Rh7DG363500 Rh7DG364000
rosa_wichuraiana Rw0G002290 Rw0G012780 Rw1G000260 Rw1G000270 Rw1G010400 Rw1G010410 Rw1G010420 Rw1G010430 Rw1G010440 Rw2G003210 Rw2G003220 Rw4G010970 Rw5G048520 Rw6G013320 Rw6G013470 Rw6G014940 Rw6G016570 Rw6G016590 Rw6G016600 Rw6G016610 Rw6G016620 Rw6G035450 Rw7G027760 Rw7G030460

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 961
Acc36I ACCTGC 1 cut(s) 674
AccB7I CCANNNNNTGG 1 cut(s) 109
AccII CGCG 2 cut(s) 287, 1236
AclI AACGTT 1 cut(s) 69
AclWI GGATC 1 cut(s) 985
AcsI RAATTY 2 cut(s) 845, 1051
AcuI CTGAAG 1 cut(s) 1164
AcvI CACGTG 1 cut(s) 191
AcyI GRCGYC 2 cut(s) 348, 958
AdeI CACNNNGTG 1 cut(s) 763
AfaI GTAC 4 cut(s) 257, 610, 1077, 1217
AfiI CCNNNNNNNGG 3 cut(s) 109, 181, 1124
AflIII ACRYGT 3 cut(s) 190, 386, 1092
AgsI TTSAA 6 cut(s) 436, 494, 886, 925, 1001, 1056
AjnI CCWGG 3 cut(s) 400, 638, 1035
AluBI AGCT 3 cut(s) 318, 465, 863
AluI AGCT 3 cut(s) 318, 465, 863
Alw21I GWGCWC 1 cut(s) 768
Alw26I GTCTC 2 cut(s) 521, 707
Alw44I GTGCAC 1 cut(s) 764
AlwI GGATC 1 cut(s) 985
AoxI GGCC 4 cut(s) 378, 477, 636, 1211
ApaLI GTGCAC 1 cut(s) 764
ApeKI GCWGC 3 cut(s) 78, 751, 754
ApoI RAATTY 2 cut(s) 845, 1051
ArsI GACNNNNNNTTYG 2 cut(s) 338, 370
AseI ATTAAT 1 cut(s) 632
Asp700I GAANNNNTTC 1 cut(s) 164
AspA2I CCTAGG 1 cut(s) 196
AspLEI GCGC 2 cut(s) 618, 808
AspS9I GGNCC 5 cut(s) 379, 477, 686, 1211, 1254
AsuHPI GGTGA 3 cut(s) 227, 715, 1232
AvaII GGWCC 2 cut(s) 686, 1254
AvrII CCTAGG 1 cut(s) 196
BaeGI GKGCMC 1 cut(s) 768
BbrPI CACGTG 1 cut(s) 191
BbsI GAAGAC 2 cut(s) 213, 735
Bbv12I GWGCWC 1 cut(s) 768
BbvI GCAGC 3 cut(s) 65, 738, 766
BccI CCATC 2 cut(s) 103, 811
BceAI ACGGC 3 cut(s) 66, 1198, 1221
BciT130I CCWGG 3 cut(s) 402, 640, 1037
BciVI GTATCC 1 cut(s) 756
BclI TGATCA 1 cut(s) 828
BcoDI GTCTC 2 cut(s) 521, 707
BfaI CTAG 4 cut(s) 197, 203, 425, 1101
BfmI CTRYAG 2 cut(s) 249, 752
BfoI RGCGCY 1 cut(s) 619
BfuAI ACCTGC 1 cut(s) 674
BfuI GTATCC 1 cut(s) 756
BisI GCNGC 4 cut(s) 79, 752, 755, 1140
BlnI CCTAGG 1 cut(s) 196
BlpI GCTNAGC 1 cut(s) 1278
BlsI GCNGC 4 cut(s) 80, 753, 756, 1141
Bme1390I CCNGG 3 cut(s) 402, 640, 1037
Bme18I GGWCC 2 cut(s) 686, 1254
BmgT120I GGNCC 5 cut(s) 379, 477, 686, 1211, 1254
BmiI GGNNCC 2 cut(s) 1212, 1232
BmrFI CCNGG 3 cut(s) 402, 640, 1037
BmrI ACTGGG 2 cut(s) 484, 540
BmsI GCATC 4 cut(s) 507, 525, 1020, 1190
BmuI ACTGGG 2 cut(s) 484, 540
BpiI GAAGAC 2 cut(s) 213, 735
Bpu1102I GCTNAGC 1 cut(s) 1278
Bsa29I ATCGAT 1 cut(s) 447
BsaAI YACGTR 1 cut(s) 191
BsaHI GRCGYC 2 cut(s) 348, 958
BsaJI CCNNGG 7 cut(s) 18, 196, 917, 987, 1035, 1036, 1234
BsaWI WCCGGW 2 cut(s) 337, 953
BsaXI ACNNNNNCTCC 2 cut(s) 252, 282
Bsc4I CCNNNNNNNGG 3 cut(s) 109, 181, 1124
Bse1I ACTGG 2 cut(s) 479, 535
BseBI CCWGG 3 cut(s) 402, 640, 1037
BseCI ATCGAT 1 cut(s) 447
BseDI CCNNGG 7 cut(s) 18, 196, 917, 987, 1035, 1036, 1234
BseGI GGATG 2 cut(s) 540, 1205
BseLI CCNNNNNNNGG 3 cut(s) 109, 181, 1124
BseMII CTCAG 1 cut(s) 1269
BseNI ACTGG 2 cut(s) 479, 535
BseRI GAGGAG 1 cut(s) 1007
BseSI GKGCMC 1 cut(s) 768
BseXI GCAGC 3 cut(s) 65, 738, 766
BseYI CCCAGC 1 cut(s) 318
Bsh1236I CGCG 2 cut(s) 287, 1236
Bsh1285I CGRYCG 3 cut(s) 338, 720, 1136
BshFI GGCC 4 cut(s) 380, 479, 638, 1213
BshVI ATCGAT 1 cut(s) 447
BsiEI CGRYCG 3 cut(s) 338, 720, 1136
BsiHKAI GWGCWC 1 cut(s) 768
BsiSI CCGG 3 cut(s) 338, 619, 954
BsiWI CGTACG 1 cut(s) 1215
BslFI GGGAC 3 cut(s) 74, 1019, 1169
BslI CCNNNNNNNGG 3 cut(s) 109, 181, 1124
BsmAI GTCTC 2 cut(s) 521, 707
BsmBI CGTCTC 1 cut(s) 707
BsmFI GGGAC 3 cut(s) 74, 1019, 1169
BsmI GAATGC 1 cut(s) 1024
BsnI GGCC 4 cut(s) 380, 479, 638, 1213
Bsp1286I GDGCHC 1 cut(s) 768
Bsp143I GATC 8 cut(s) 264, 331, 417, 717, 828, 977, 1133, 1171
Bsp1720I GCTNAGC 1 cut(s) 1278
BspANI GGCC 4 cut(s) 380, 479, 638, 1213
BspCNI CTCAG 1 cut(s) 1270
BspDI ATCGAT 1 cut(s) 447
BspFNI CGCG 2 cut(s) 287, 1236
BspLI GGNNCC 2 cut(s) 1212, 1232
BspMAI CTGCAG 2 cut(s) 253, 756
BspMI ACCTGC 1 cut(s) 674
BspPI GGATC 1 cut(s) 985
BsrI ACTGG 2 cut(s) 479, 535
BssECI CCNNGG 7 cut(s) 18, 196, 917, 987, 1035, 1036, 1234
BssMI GATC 8 cut(s) 264, 331, 417, 717, 828, 977, 1133, 1171
BssNI GRCGYC 2 cut(s) 348, 958
BssT1I CCWWGG 2 cut(s) 18, 196
Bst2UI CCWGG 3 cut(s) 402, 640, 1037
Bst4CI ACNGT 8 cut(s) 64, 155, 212, 501, 581, 921, 1127, 1220
BstACI GRCGYC 2 cut(s) 348, 958
BstAPI GCANNNNNTGC 2 cut(s) 763, 1030
BstBAI YACGTR 1 cut(s) 191
BstC8I GCNNGC 4 cut(s) 378, 759, 841, 1022
BstDEI CTNAG 5 cut(s) 24, 667, 835, 1266, 1278
BstDSI CCRYGG 3 cut(s) 917, 987, 1234
BstF5I GGATG 2 cut(s) 540, 1205
BstFNI CGCG 2 cut(s) 287, 1236
BstH2I RGCGCY 1 cut(s) 619
BstHHI GCGC 2 cut(s) 618, 808
BstKTI GATC 8 cut(s) 267, 334, 420, 720, 831, 980, 1136, 1174
BstMAI GTCTC 2 cut(s) 521, 707
BstMBI GATC 8 cut(s) 264, 331, 417, 717, 828, 977, 1133, 1171
BstMCI CGRYCG 3 cut(s) 338, 720, 1136
BstMWI GCNNNNNNNGC 6 cut(s) 356, 485, 763, 1021, 1030, 1145
BstNI CCWGG 3 cut(s) 402, 640, 1037
BstNSI RCATGY 2 cut(s) 1096, 1186
BstSCI CCNGG 3 cut(s) 400, 638, 1035
BstSFI CTRYAG 2 cut(s) 249, 752
BstSLI GKGCMC 1 cut(s) 768
BstUI CGCG 2 cut(s) 287, 1236
BstV1I GCAGC 3 cut(s) 65, 738, 766
BstV2I GAAGAC 2 cut(s) 213, 735
Bsu15I ATCGAT 1 cut(s) 447
BsuI GTATCC 1 cut(s) 756
BsuRI GGCC 4 cut(s) 380, 479, 638, 1213
BsuTUI ATCGAT 1 cut(s) 447
BtgI CCRYGG 3 cut(s) 917, 987, 1234
BtgZI GCGATG 1 cut(s) 443
BtsCI GGATG 2 cut(s) 540, 1205
BtsI GCAGTG 2 cut(s) 366, 1015
BtsIMutI CAGTG 2 cut(s) 366, 1015
BveI ACCTGC 1 cut(s) 674
Cac8I GCNNGC 4 cut(s) 378, 759, 841, 1022
CfoI GCGC 2 cut(s) 618, 808
Cfr13I GGNCC 5 cut(s) 379, 477, 686, 1211, 1254
Cfr42I CCGCGG 1 cut(s) 1237
ClaI ATCGAT 1 cut(s) 447
CseI GACGC 2 cut(s) 293, 356
Csp6I GTAC 4 cut(s) 256, 609, 1076, 1216
CviAII CATG 3 cut(s) 981, 1093, 1183
CviQI GTAC 4 cut(s) 256, 609, 1076, 1216
DdeI CTNAG 5 cut(s) 24, 667, 835, 1266, 1278
DpnI GATC 8 cut(s) 266, 333, 419, 719, 830, 979, 1135, 1173
DpnII GATC 8 cut(s) 264, 331, 417, 717, 828, 977, 1133, 1171
DraIII CACNNNGTG 1 cut(s) 763
EciI GGCGGA 1 cut(s) 359
Eco130I CCWWGG 2 cut(s) 18, 196
Eco32I GATATC 1 cut(s) 1272
Eco47I GGWCC 2 cut(s) 686, 1254
Eco57I CTGAAG 1 cut(s) 1164
Eco72I CACGTG 1 cut(s) 191
EcoRI GAATTC 1 cut(s) 845
EcoRII CCWGG 3 cut(s) 400, 638, 1035
EcoRV GATATC 1 cut(s) 1272
EcoT14I CCWWGG 2 cut(s) 18, 196
EcoT22I ATGCAT 1 cut(s) 522
ErhI CCWWGG 2 cut(s) 18, 196
Esp3I CGTCTC 1 cut(s) 707
FaeI CATG 3 cut(s) 984, 1096, 1186
FalI AAGNNNNNCTT 2 cut(s) 1161, 1193
FaqI GGGAC 3 cut(s) 74, 1019, 1169
FatI CATG 3 cut(s) 980, 1092, 1182
FauI CCCGC 5 cut(s) 280, 832, 930, 1201, 1229
FbaI TGATCA 1 cut(s) 828
Fnu4HI GCNGC 4 cut(s) 79, 752, 755, 1140
FokI GGATG 2 cut(s) 547, 1212
Fsp4HI GCNGC 4 cut(s) 79, 752, 755, 1140
FspBI CTAG 4 cut(s) 197, 203, 425, 1101
GlaI GCGC 2 cut(s) 617, 807
GluI GCNGC 4 cut(s) 79, 752, 755, 1140
GsaI CCCAGC 1 cut(s) 322
HaeII RGCGCY 1 cut(s) 619
HaeIII GGCC 4 cut(s) 380, 479, 638, 1213
HapII CCGG 3 cut(s) 338, 619, 954
HgaI GACGC 2 cut(s) 293, 356
HhaI GCGC 2 cut(s) 618, 808
Hin1I GRCGYC 2 cut(s) 348, 958
Hin1II CATG 3 cut(s) 984, 1096, 1186
Hin6I GCGC 2 cut(s) 616, 806
HinP1I GCGC 2 cut(s) 616, 806
HincII GTYRAC 3 cut(s) 7, 67, 172
HindII GTYRAC 3 cut(s) 7, 67, 172
HinfI GANTC 3 cut(s) 625, 734, 1157
HpaI GTTAAC 1 cut(s) 67
HpaII CCGG 3 cut(s) 338, 619, 954
HphI GGTGA 3 cut(s) 227, 715, 1232
Hpy166II GTNNAC 8 cut(s) 7, 67, 172, 454, 706, 766, 1076, 1190
Hpy188I TCNGA 5 cut(s) 50, 116, 727, 828, 870
Hpy8I GTNNAC 8 cut(s) 7, 67, 172, 454, 706, 766, 1076, 1190
Hpy99I CGWCG 2 cut(s) 97, 134
HpyAV CCTTC 3 cut(s) 128, 1064, 1284
HpyCH4III ACNGT 8 cut(s) 64, 155, 212, 501, 581, 921, 1127, 1220
HpyCH4IV ACGT 5 cut(s) 69, 177, 190, 386, 958
HpyCH4V TGCA 9 cut(s) 251, 488, 520, 557, 683, 754, 766, 906, 1203
HpyF10VI GCNNNNNNNGC 6 cut(s) 356, 485, 763, 1021, 1030, 1145
HpyF3I CTNAG 5 cut(s) 24, 667, 835, 1266, 1278
HpySE526I ACGT 5 cut(s) 69, 177, 190, 386, 958
Hsp92I GRCGYC 2 cut(s) 348, 958
Hsp92II CATG 3 cut(s) 984, 1096, 1186
HspAI GCGC 2 cut(s) 616, 806
Ksp22I TGATCA 1 cut(s) 828
KspAI GTTAAC 1 cut(s) 67
KspI CCGCGG 1 cut(s) 1237
Kzo9I GATC 8 cut(s) 264, 331, 417, 717, 828, 977, 1133, 1171
LmnI GCTCC 2 cut(s) 613, 989
Lsp1109I GCAGC 3 cut(s) 65, 738, 766
LweI GCATC 4 cut(s) 507, 525, 1020, 1190
MaeI CTAG 4 cut(s) 197, 203, 425, 1101
MaeII ACGT 5 cut(s) 69, 177, 190, 386, 958
MaeIII GTNAC 2 cut(s) 404, 1103
MalI GATC 8 cut(s) 266, 333, 419, 719, 830, 979, 1135, 1173
MboI GATC 8 cut(s) 264, 331, 417, 717, 828, 977, 1133, 1171
MboII GAAGA 4 cut(s) 218, 740, 908, 1181
MfeI CAATTG 1 cut(s) 489
MhlI GDGCHC 1 cut(s) 768
MluCI AATT 7 cut(s) 120, 489, 845, 907, 941, 1051, 1297
MlyI GAGTC 1 cut(s) 1151
MmeI TCCRAC 3 cut(s) 94, 127, 261
Mph1103I ATGCAT 1 cut(s) 522
MroXI GAANNNNTTC 1 cut(s) 164
MseI TTAA 4 cut(s) 66, 632, 792, 963
MslI CAYNNNNRTG 1 cut(s) 449
MspA1I CMGCKG 3 cut(s) 318, 751, 1236
MspI CCGG 3 cut(s) 338, 619, 954
MspR9I CCNGG 3 cut(s) 402, 640, 1037
MunI CAATTG 1 cut(s) 489
Mva1269I GAATGC 1 cut(s) 1024
MvaI CCWGG 3 cut(s) 402, 640, 1037
MvnI CGCG 2 cut(s) 287, 1236
MwoI GCNNNNNNNGC 6 cut(s) 356, 485, 763, 1021, 1030, 1145
NdeII GATC 8 cut(s) 264, 331, 417, 717, 828, 977, 1133, 1171
NlaIII CATG 3 cut(s) 984, 1096, 1186
NlaIV GGNNCC 2 cut(s) 1212, 1232
NsiI ATGCAT 1 cut(s) 522
NspI RCATGY 2 cut(s) 1096, 1186
PasI CCCWGGG 1 cut(s) 1036
PciI ACATGT 1 cut(s) 1092
PcsI WCGNNNNNNNCGW 3 cut(s) 174, 264, 1211
PctI GAATGC 1 cut(s) 1024
PdmI GAANNNNTTC 1 cut(s) 164
PfeI GAWTC 2 cut(s) 625, 734
Pfl23II CGTACG 1 cut(s) 1215
PflMI CCANNNNNTGG 1 cut(s) 109
PkrI GCNGC 4 cut(s) 80, 753, 756, 1141
Ple19I CGATCG 2 cut(s) 720, 1136
PleI GAGTC 1 cut(s) 1151
PmaCI CACGTG 1 cut(s) 191
PmlI CACGTG 1 cut(s) 191
PpsI GAGTC 1 cut(s) 1151
Ppu21I YACGTR 1 cut(s) 191
PscI ACATGT 1 cut(s) 1092
PshBI ATTAAT 1 cut(s) 632
Psp1406I AACGTT 1 cut(s) 69
Psp6I CCWGG 3 cut(s) 400, 638, 1035
PspCI CACGTG 1 cut(s) 191
PspFI CCCAGC 1 cut(s) 318
PspGI CCWGG 3 cut(s) 400, 638, 1035
PspLI CGTACG 1 cut(s) 1215
PspN4I GGNNCC 2 cut(s) 1212, 1232
PspPI GGNCC 5 cut(s) 379, 477, 686, 1211, 1254
PstI CTGCAG 2 cut(s) 253, 756
PvuI CGATCG 2 cut(s) 720, 1136
PvuII CAGCTG 1 cut(s) 318
RsaI GTAC 4 cut(s) 257, 610, 1077, 1217
RsaNI GTAC 4 cut(s) 256, 609, 1076, 1216
RseI CAYNNNNRTG 1 cut(s) 449
SacII CCGCGG 1 cut(s) 1237
SaqAI TTAA 4 cut(s) 66, 632, 792, 963
SatI GCNGC 4 cut(s) 79, 752, 755, 1140
Sau3AI GATC 8 cut(s) 264, 331, 417, 717, 828, 977, 1133, 1171
Sau96I GGNCC 5 cut(s) 379, 477, 686, 1211, 1254
SchI GAGTC 1 cut(s) 1151
ScrFI CCNGG 3 cut(s) 402, 640, 1037
SduI GDGCHC 1 cut(s) 768
SfaNI GCATC 4 cut(s) 507, 525, 1020, 1190
SfcI CTRYAG 2 cut(s) 249, 752
Sfr303I CCGCGG 1 cut(s) 1237
SgrBI CCGCGG 1 cut(s) 1237
SinI GGWCC 2 cut(s) 686, 1254
SmiMI CAYNNNNRTG 1 cut(s) 449
Sse9I AATT 7 cut(s) 120, 489, 845, 907, 941, 1051, 1297
SspI AATATT 1 cut(s) 1245
SspMI CTAG 4 cut(s) 197, 203, 425, 1101
StyD4I CCNGG 3 cut(s) 400, 638, 1035
StyI CCWWGG 2 cut(s) 18, 196
TaaI ACNGT 8 cut(s) 64, 155, 212, 501, 581, 921, 1127, 1220
TaiI ACGT 5 cut(s) 72, 180, 193, 389, 961
TaqI TCGA 9 cut(s) 95, 129, 334, 410, 420, 447, 798, 913, 1028
TasI AATT 7 cut(s) 120, 489, 845, 907, 941, 1051, 1297
TauI GCSGC 1 cut(s) 1142
TfiI GAWTC 2 cut(s) 625, 734
Tru1I TTAA 4 cut(s) 66, 632, 792, 963
Tru9I TTAA 4 cut(s) 66, 632, 792, 963
TscAI CASTG 2 cut(s) 366, 1022
TseI GCWGC 3 cut(s) 78, 751, 754
TspDTI ATGAA 1 cut(s) 1103
TspGWI ACGGA 5 cut(s) 273, 626, 662, 908, 1004
TspRI CASTG 2 cut(s) 366, 1022
Van91I CCANNNNNTGG 1 cut(s) 109
VneI GTGCAC 1 cut(s) 764
VpaK11BI GGWCC 2 cut(s) 686, 1254
VspI ATTAAT 1 cut(s) 632
XapI RAATTY 2 cut(s) 845, 1051
XceI RCATGY 2 cut(s) 1096, 1186
XcmI CCANNNNNNNNNTGG 2 cut(s) 358, 636
XmaJI CCTAGG 1 cut(s) 196
XmnI GAANNNNTTC 1 cut(s) 164
XspI CTAG 4 cut(s) 197, 203, 425, 1101
ZraI GACGTC 1 cut(s) 959
Zsp2I ATGCAT 1 cut(s) 522
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.