Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0000124

Physical Location & Seq

Genomic Coordinates Reverse (-)

59979674 .. 59983925

Gene Structure 4252 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G035450.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1251 bp

ATGGCCGATTTCAGTACAATGTTTCACCCAAGCTTCATCGTCGTTGTGCGGTACCCGGGACAGAACGTCGAAGATGCGGTGAGTTGTTGGTTGGGAAAAATTCCACCGCGCTTTAGTAGGGAGCACTTGAGGGACGATGAGGATGGGGTCGCTCGACTGGTCTTGGATGGATGCAGGGAGTGTTCATATTATGTGAAGGTTACCCCACAAGGGCAGGACCATTGGCTGGGTTCTGGTTGGGGGAGCTTTCTCGAGAATGTCCGACACGGTCAGGGTCGAATGGTGCTGCTACTCCAGTACAAAGGCGGCATGAAGTTCGTCGTGCGCCGGTATGATGTGAACGGGGCGTTGATGTACGCTTCTCCTCGACCCAGATTCGGTCGCCCGCCTCCCACATCACCCACTATTAGGGGGGTATTCGATGGCTTCGTTTCTGACATTTGGGATCAGACGGTCACTGTGCCTGTCGTACCAAGAGGTGTCGTCCATGATAGGCTGATTGCGGACGGAGCCCCTGCTGTTTGTGACTTCCGATGGGAGACGGATCCTCCAGTATTACAGCAGGTGGAGATCACGGGAGGACGTAGGAAGCTAAGATTCGTACATGAATGGGAACGCTTTCACTTGGAGAATCGCTTGGGAAAACGTCGGAACCCTTTGCACGACGCGCTGCAATTCACCCGTGCTCCAGACGCGGCTCCACATACCAATGGTATTGAGCAAGAAGAGGGGAATCTGGACCCTGAGGAGGACCGTAGGGATGAGGATGGGGCACGGGTGGAAGATATGGAGGAAGATATGGAGCAAGGAATCAATGAAGATGCAGTTGAAGAAGGCGACGACGAAACTCCGGAGGAAAGGGTGCCAGTTTCATGGCCGTACAGGGAGATCCTGCCAATGCACAATCCAGAGATGTCACGGTCCAAGTTTGCTCAGTCCACATTTCGCAGACGAACACCAGTTCAGATAAAGGTGCAGAAATCCGACGGACGTCTGTGGAGAATGAAAGCCGTTCCATCCAATACCACTCACTACTTAAGTAAAGGGTACACCAAATTCAGGAAGGACCTCAGTCTGCCTATAAGGTCTGCAATCGAGCTCCATGTGGTTGATGGCAACAGATTGGTTTTCGAGATATTAGAAATGAATCCAGAAGATGAAGCTGAGGAAAATGGGGCAAACATTGAGATTGGAGGGCTATGGAGGTTGATGAGAAACCAACTGAAGATTACAATGATATTGGAGGGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016553 GO:0016554 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR

Protein Analysis

416

Amino Acids

47.8

Weight (kDa)

5.58

Isoelectric Point (pI)

61.36

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000124)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g10992 FvH4_2g25150 FvH4_2g27910 FvH4_2g27931 FvH4_4g09443 FvH4_4g09490 FvH4_4g15990 FvH4_4g15991 FvH4_6g07180 FvH4_6g40320 FvH4_7g10222 FvH4_7g10251
rosa_chinensis	RchiOBHm_Chr2g0155611
rosa_laevigata	RLG00000009253 RLG00000009254 RLG00000011848 RLG00000017301 RLG00000017302 RLG00000034909
rosa_multiflora	Rmu_co8063658.1_g000001 Rmu_co8240443.1_g000001 Rmu_co8264451.1_g000001 Rmu_co8381937.1_g000001 Rmu_co8419903.1_g000001 Rmu_co8513405.1_g000002 Rmu_co8522915.1_g000001 Rmu_co8522915.1_g000004 Rmu_sc0000279.1_g000024 Rmu_sc0000279.1_g000048 Rmu_sc0000642.1_g000017 Rmu_sc0002045.1_g000015 Rmu_sc0002045.1_g000018 Rmu_sc0002045.1_g000023 Rmu_sc0002045.1_g000028 Rmu_sc0003047.1_g000008 Rmu_sc0003179.1_g000019 Rmu_sc0003179.1_g000020 Rmu_sc0003179.1_g000022 Rmu_sc0003179.1_g000023 Rmu_sc0003422.1_g000011 Rmu_sc0004999.1_g000014 Rmu_sc0005712.1_g000018 Rmu_sc0005712.1_g000023 Rmu_sc0006198.1_g000019 Rmu_sc0006373.1_g000005 Rmu_sc0006514.1_g000028 Rmu_sc0006514.1_g000031 Rmu_sc0007367.1_g000010 Rmu_sc0011475.1_g000002 Rmu_sc0025304.1_g000001 Rmu_ssc0000161.1_g000030 Rmu_ssc0000161.1_g000032 Rmu_ssc0000387.1_g000018
rosa_roxburghii	Rroxscaffold_1G00031090 Rroxscaffold_1G00032770 Rroxscaffold_1G00068950 Rroxscaffold_1G00069000 Rroxscaffold_1G00069010 Rroxscaffold_2G00129060 Rroxscaffold_2G00129100 Rroxscaffold_4G00309310 Rroxscaffold_4G00309320 Rroxscaffold_5G00350620 Rroxscaffold_5G00350630 Rroxscaffold_7G00162650 Rroxscaffold_7G00162660 Rroxscaffold_7G00162710
rosa_rugosa	Rorug02G0564700 Rorug02G0564700 Rorug03G0343100 Rorug04G0189700 Rorug05G0102800 Rorug05G0102900 Rorug05G0103000 Rorug05G0106500 Rorug05G0106600 Rorug05G0106700 Rorug05G0252800 Rorug07G0182100 Rorug07G0283500 Rorug07G0283600
rosa_samantha	Rh1AG004000 Rh1AG004100 Rh1AG004200 Rh1AG004400 Rh1AG004500 Rh1AG004600 Rh1AG004800 Rh1AG004900 Rh1AG005300 Rh1AG007000 Rh1AG115000 Rh1CG049400 Rh1CG055400 Rh1CG111000 Rh1DG053600 Rh1DG053700 Rh1DG059300 Rh1DG119700 Rh1DG177100 Rh1DG177200 Rh2AG353800 Rh2AG354000 Rh2AG354100 Rh2AG354300 Rh2AG354400 Rh2AG354500 Rh2AG354600 Rh2AG354700 Rh2AG642300 Rh2AG642400 Rh2AG642500 Rh2BG336500 Rh2BG336600 Rh2BG336700 Rh2BG336800 Rh2BG336900 Rh2CG299900 Rh2CG300000 Rh2CG300100 Rh2DG337000 Rh2DG337100 Rh3AG246600 Rh3BG121900 Rh3BG122300 Rh3BG122600 Rh3BG122700 Rh3DG304800 Rh3DG304900 Rh4AG148800 Rh4AG249000 Rh4AG249100 Rh4AG249200 Rh4BG182700 Rh4BG182800 Rh4BG182900 Rh4BG254400 Rh4BG254500 Rh4BG254600 Rh4CG155500 Rh4CG155700 Rh4DG057900 Rh4DG058000 Rh4DG058100 Rh4DG058200 Rh4DG129100 Rh5AG364500 Rh5AG364600 Rh5AG364800 Rh5AG365300 Rh5CG363700 Rh5CG497600 Rh5DG239500 Rh5DG239600 Rh6AG173500 Rh6AG175400 Rh6BG075900 Rh6BG076300 Rh6BG076400 Rh6BG076500 Rh6BG076600 Rh6CG151000 Rh6CG151200 Rh6CG151300 Rh6CG151400 Rh6CG205200 Rh6CG205300 Rh6CG419700 Rh6CG419900 Rh6CG420100 Rh6DG498700 Rh6DG498800 Rh7AG329000 Rh7AG329100 Rh7AG329300 Rh7AG329400 Rh7AG353000 Rh7AG353100 Rh7AG353300 Rh7AG353400 Rh7AG353500 Rh7CG346400 Rh7CG346500 Rh7CG346700 Rh7CG370800 Rh7CG370900 Rh7CG371000 Rh7CG371100 Rh7DG325000 Rh7DG325100 Rh7DG325200 Rh7DG325300 Rh7DG353100 Rh7DG353200 Rh7DG353300 Rh7DG363500 Rh7DG364000
rosa_wichuraiana	Rw0G002290 Rw0G012780 Rw1G000260 Rw1G000270 Rw1G010400 Rw1G010410 Rw1G010420 Rw1G010430 Rw1G010440 Rw2G003210 Rw2G003220 Rw4G010970 Rw5G048520 Rw6G013320 Rw6G013470 Rw6G014940 Rw6G016570 Rw6G016590 Rw6G016600 Rw6G016610 Rw6G016620 Rw6G035450 Rw7G027760 Rw7G030460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	553
AatII	GACGTC	1 cut(s)	994
Acc36I	ACCTGC	1 cut(s)	553
Acc65I	GGTACC	1 cut(s)	51
AccB1I	GGYRCC	2 cut(s)	51, 862
AccB7I	CCANNNNNTGG	1 cut(s)	226
AccII	CGCG	3 cut(s)	109, 668, 695
AccIII	TCCGGA	1 cut(s)	850
AciI	CCGC	7 cut(s)	49, 77, 107, 306, 386, 503, 695
AclWI	GGATC	4 cut(s)	453, 539, 552, 883
AcoI	YGGCCR	2 cut(s)	3, 875
AcsI	RAATTY	2 cut(s)	99, 1055
AcuI	CTGAAG	1 cut(s)	1244
AcyI	GRCGYC	1 cut(s)	991
AfaI	GTAC	8 cut(s)	16, 53, 299, 356, 471, 603, 881, 1049
AfiI	CCNNNNNNNGG	6 cut(s)	210, 226, 377, 408, 748, 1059
AflII	CTTAAG	1 cut(s)	1036
AgsI	TTSAA	1 cut(s)	830
AhdI	GACNNNNNGTC	1 cut(s)	65
AluBI	AGCT	5 cut(s)	33, 246, 592, 1099, 1163
AluI	AGCT	5 cut(s)	33, 246, 592, 1099, 1163
Alw21I	GWGCWC	3 cut(s)	126, 688, 1101
Alw26I	GTCTC	1 cut(s)	533
AlwI	GGATC	4 cut(s)	453, 539, 552, 883
Ama87I	CYCGRG	2 cut(s)	55, 251
Aor13HI	TCCGGA	1 cut(s)	850
AoxI	GGCC	2 cut(s)	3, 875
ApeKI	GCWGC	2 cut(s)	286, 670
ApoI	RAATTY	2 cut(s)	99, 1055
Asp700I	GAANNNNTTC	1 cut(s)	618
Asp718I	GGTACC	1 cut(s)	51
AspLEI	GCGC	3 cut(s)	111, 327, 670
AspS9I	GGNCC	5 cut(s)	217, 739, 751, 921, 1066
AsuC2I	CCSGG	2 cut(s)	56, 57
AsuHPI	GGTGA	4 cut(s)	17, 91, 390, 670
AvaI	CYCGRG	2 cut(s)	55, 251
AvaII	GGWCC	5 cut(s)	217, 739, 751, 921, 1066
AxyI	CCTNAGG	1 cut(s)	744
BaeGI	GKGCMC	1 cut(s)	775
BamHI	GGATCC	1 cut(s)	544
BanI	GGYRCC	2 cut(s)	51, 862
BanII	GRGCYC	2 cut(s)	514, 1101
Bbv12I	GWGCWC	3 cut(s)	126, 688, 1101
BbvCI	CCTCAGC	1 cut(s)	1164
BbvI	GCAGC	2 cut(s)	273, 657
BccI	CCATC	7 cut(s)	137, 161, 416, 528, 761, 1024, 1106
BceAI	ACGGC	2 cut(s)	862, 995
BcgI	CGANNNNNNTGC	2 cut(s)	298, 332
BcnI	CCSGG	2 cut(s)	56, 57
BcoDI	GTCTC	1 cut(s)	533
BfaI	CTAG	1 cut(s)	1249
BfrI	CTTAAG	1 cut(s)	1036
BfuAI	ACCTGC	1 cut(s)	553
BisI	GCNGC	4 cut(s)	287, 307, 671, 696
BlsI	GCNGC	4 cut(s)	288, 308, 672, 697
Bme1390I	CCNGG	2 cut(s)	56, 57
Bme18I	GGWCC	5 cut(s)	217, 739, 751, 921, 1066
BmeRI	GACNNNNNGTC	1 cut(s)	65
BmeT110I	CYCGRG	2 cut(s)	55, 251
BmgT120I	GGNCC	5 cut(s)	217, 739, 751, 921, 1066
BmiI	GGNNCC	7 cut(s)	53, 511, 546, 653, 699, 741, 864
BmrFI	CCNGG	2 cut(s)	56, 57
BmsI	GCATC	3 cut(s)	64, 161, 811
BoxI	GACNNNNGTC	2 cut(s)	990, 1071
BpmI	CTGGAG	3 cut(s)	278, 534, 672
Bpu10I	CCTNAGC	1 cut(s)	1164
BpuEI	CTTGAG	1 cut(s)	148
BpuMI	CCSGG	2 cut(s)	56, 57
BsaHI	GRCGYC	1 cut(s)	991
BsaJI	CCNNGG	1 cut(s)	55
BsaWI	WCCGGW	1 cut(s)	850
BsaXI	ACNNNNNCTCC	4 cut(s)	532, 562, 670, 700
Bsc4I	CCNNNNNNNGG	6 cut(s)	210, 226, 377, 408, 748, 1059
Bse118I	RCCGGY	1 cut(s)	327
Bse1I	ACTGG	5 cut(s)	162, 295, 551, 866, 959
Bse21I	CCTNAGG	1 cut(s)	744
BseAI	TCCGGA	1 cut(s)	850
BseDI	CCNNGG	1 cut(s)	55
BseGI	GGATG	6 cut(s)	148, 172, 176, 766, 772, 1016
BseLI	CCNNNNNNNGG	6 cut(s)	210, 226, 377, 408, 748, 1059
BseMII	CTCAG	4 cut(s)	735, 947, 1084, 1155
BseNI	ACTGG	5 cut(s)	162, 295, 551, 866, 959
BseRI	GAGGAG	2 cut(s)	354, 761
BseSI	GKGCMC	1 cut(s)	775
BseXI	GCAGC	2 cut(s)	273, 657
BseYI	CCCAGC	1 cut(s)	226
BsgI	GTGCAG	1 cut(s)	995
Bsh1236I	CGCG	3 cut(s)	109, 668, 695
Bsh1285I	CGRYCG	1 cut(s)	382
BshFI	GGCC	2 cut(s)	5, 877
BshNI	GGYRCC	2 cut(s)	51, 862
BsiEI	CGRYCG	1 cut(s)	382
BsiHKAI	GWGCWC	3 cut(s)	126, 688, 1101
BsiHKCI	CYCGRG	2 cut(s)	55, 251
BsiSI	CCGG	3 cut(s)	56, 328, 851
BslFI	GGGAC	2 cut(s)	72, 146
BslI	CCNNNNNNNGG	6 cut(s)	210, 226, 377, 408, 748, 1059
BsmAI	GTCTC	1 cut(s)	533
BsmBI	CGTCTC	1 cut(s)	533
BsmFI	GGGAC	2 cut(s)	72, 146
BsnI	GGCC	2 cut(s)	5, 877
BsoBI	CYCGRG	2 cut(s)	55, 251
Bsp1286I	GDGCHC	5 cut(s)	126, 514, 688, 775, 1101
Bsp13I	TCCGGA	1 cut(s)	850
Bsp143I	GATC	4 cut(s)	445, 544, 570, 888
BspACI	CCGC	7 cut(s)	49, 77, 107, 306, 386, 503, 695
BspANI	GGCC	2 cut(s)	5, 877
BspCNI	CTCAG	4 cut(s)	736, 946, 1083, 1156
BspEI	TCCGGA	1 cut(s)	850
BspFNI	CGCG	3 cut(s)	109, 668, 695
BspLI	GGNNCC	7 cut(s)	53, 511, 546, 653, 699, 741, 864
BspMI	ACCTGC	1 cut(s)	553
BspPI	GGATC	4 cut(s)	453, 539, 552, 883
BspT107I	GGYRCC	2 cut(s)	51, 862
BspTI	CTTAAG	1 cut(s)	1036
BsrFI	RCCGGY	1 cut(s)	327
BsrI	ACTGG	5 cut(s)	162, 295, 551, 866, 959
BssAI	RCCGGY	1 cut(s)	327
BssECI	CCNNGG	1 cut(s)	55
BssMI	GATC	4 cut(s)	445, 544, 570, 888
BssNI	GRCGYC	1 cut(s)	991
Bst4CI	ACNGT	5 cut(s)	269, 454, 460, 755, 921
Bst6I	CTCTTC	1 cut(s)	720
BstACI	GRCGYC	1 cut(s)	991
BstAFI	CTTAAG	1 cut(s)	1036
BstC8I	GCNNGC	1 cut(s)	386
BstDEI	CTNAG	5 cut(s)	593, 744, 933, 1070, 1164
BstEII	GGTNACC	1 cut(s)	199
BstF5I	GGATG	6 cut(s)	148, 172, 176, 766, 772, 1016
BstFNI	CGCG	3 cut(s)	109, 668, 695
BstHHI	GCGC	3 cut(s)	111, 327, 670
BstKTI	GATC	4 cut(s)	448, 547, 573, 891
BstMAI	GTCTC	1 cut(s)	533
BstMBI	GATC	4 cut(s)	445, 544, 570, 888
BstMCI	CGRYCG	1 cut(s)	382
BstMWI	GCNNNNNNNGC	3 cut(s)	509, 667, 692
BstPAI	GACNNNNGTC	2 cut(s)	990, 1071
BstPI	GGTNACC	1 cut(s)	199
BstSCI	CCNGG	2 cut(s)	54, 55
BstSLI	GKGCMC	1 cut(s)	775
BstUI	CGCG	3 cut(s)	109, 668, 695
BstV1I	GCAGC	2 cut(s)	273, 657
BstX2I	RGATCY	2 cut(s)	544, 888
BstXI	CCANNNNNNTGG	1 cut(s)	873
BstYI	RGATCY	2 cut(s)	544, 888
Bsu36I	CCTNAGG	1 cut(s)	744
BsuRI	GGCC	2 cut(s)	5, 877
BtsCI	GGATG	6 cut(s)	148, 172, 176, 766, 772, 1016
BtsIMutI	CAGTG	1 cut(s)	456
BveI	ACCTGC	1 cut(s)	553
Cac8I	GCNNGC	1 cut(s)	386
CfoI	GCGC	3 cut(s)	111, 327, 670
Cfr10I	RCCGGY	1 cut(s)	327
Cfr13I	GGNCC	5 cut(s)	217, 739, 751, 921, 1066
Cfr9I	CCCGGG	1 cut(s)	55
CseI	GACGC	2 cut(s)	674, 701
Csp6I	GTAC	8 cut(s)	15, 52, 298, 355, 470, 602, 880, 1048
CviAII	CATG	5 cut(s)	310, 488, 605, 873, 1103
CviQI	GTAC	8 cut(s)	15, 52, 298, 355, 470, 602, 880, 1048
DdeI	CTNAG	5 cut(s)	593, 744, 933, 1070, 1164
DpnI	GATC	4 cut(s)	447, 546, 572, 890
DpnII	GATC	4 cut(s)	445, 544, 570, 888
DriI	GACNNNNNGTC	1 cut(s)	65
EaeI	YGGCCR	2 cut(s)	3, 875
Eam1104I	CTCTTC	1 cut(s)	720
Eam1105I	GACNNNNNGTC	1 cut(s)	65
EarI	CTCTTC	1 cut(s)	720
Ecl136II	GAGCTC	1 cut(s)	1099
Eco24I	GRGCYC	2 cut(s)	514, 1101
Eco47I	GGWCC	5 cut(s)	217, 739, 751, 921, 1066
Eco53kI	GAGCTC	1 cut(s)	1099
Eco57I	CTGAAG	1 cut(s)	1244
Eco81I	CCTNAGG	1 cut(s)	744
Eco88I	CYCGRG	2 cut(s)	55, 251
Eco91I	GGTNACC	1 cut(s)	199
EcoICRI	GAGCTC	1 cut(s)	1099
EcoO109I	RGGNCCY	1 cut(s)	1066
EcoO65I	GGTNACC	1 cut(s)	199
EcoT38I	GRGCYC	2 cut(s)	514, 1101
Esp3I	CGTCTC	1 cut(s)	533
FaeI	CATG	5 cut(s)	313, 491, 608, 876, 1106
FaqI	GGGAC	2 cut(s)	72, 146
FatI	CATG	5 cut(s)	309, 487, 604, 872, 1102
FauI	CCCGC	1 cut(s)	393
Fnu4HI	GCNGC	4 cut(s)	287, 307, 671, 696
FokI	GGATG	6 cut(s)	155, 179, 183, 773, 779, 1003
FriOI	GRGCYC	2 cut(s)	514, 1101
Fsp4HI	GCNGC	4 cut(s)	287, 307, 671, 696
FspBI	CTAG	1 cut(s)	1249
GlaI	GCGC	3 cut(s)	110, 326, 669
GluI	GCNGC	4 cut(s)	287, 307, 671, 696
GsaI	CCCAGC	1 cut(s)	230
GsuI	CTGGAG	3 cut(s)	278, 534, 672
HaeIII	GGCC	2 cut(s)	5, 877
HapII	CCGG	3 cut(s)	56, 328, 851
HgaI	GACGC	2 cut(s)	674, 701
HhaI	GCGC	3 cut(s)	111, 327, 670
Hin1I	GRCGYC	1 cut(s)	991
Hin1II	CATG	5 cut(s)	313, 491, 608, 876, 1106
Hin6I	GCGC	3 cut(s)	109, 325, 668
HinP1I	GCGC	3 cut(s)	109, 325, 668
HindIII	AAGCTT	1 cut(s)	31
HinfI	GANTC	6 cut(s)	375, 597, 631, 733, 810, 1147
HpaII	CCGG	3 cut(s)	56, 328, 851
HphI	GGTGA	4 cut(s)	17, 91, 390, 670
Hpy166II	GTNNAC	3 cut(s)	340, 939, 1050
Hpy188I	TCNGA	7 cut(s)	263, 436, 450, 533, 651, 966, 985
Hpy188III	TCNNGA	9 cut(s)	251, 253, 689, 737, 851, 908, 1060, 1132, 1151
Hpy8I	GTNNAC	3 cut(s)	340, 939, 1050
Hpy99I	CGWCG	8 cut(s)	44, 71, 323, 651, 668, 842, 845, 989
HpyAV	CCTTC	3 cut(s)	190, 827, 1057
HpyCH4III	ACNGT	5 cut(s)	269, 454, 460, 755, 921
HpyCH4IV	ACGT	4 cut(s)	66, 583, 646, 991
HpyCH4V	TGCA	7 cut(s)	174, 661, 673, 824, 901, 976, 1091
HpyF10VI	GCNNNNNNNGC	3 cut(s)	509, 667, 692
HpyF3I	CTNAG	5 cut(s)	593, 744, 933, 1070, 1164
HpySE526I	ACGT	4 cut(s)	66, 583, 646, 991
Hsp92I	GRCGYC	1 cut(s)	991
Hsp92II	CATG	5 cut(s)	313, 491, 608, 876, 1106
HspAI	GCGC	3 cut(s)	109, 325, 668
Kpn2I	TCCGGA	1 cut(s)	850
KpnI	GGTACC	1 cut(s)	55
Kzo9I	GATC	4 cut(s)	445, 544, 570, 888
LmnI	GCTCC	7 cut(s)	121, 243, 509, 691, 703, 802, 1104
Lsp1109I	GCAGC	2 cut(s)	273, 657
LweI	GCATC	3 cut(s)	64, 161, 811
MaeI	CTAG	1 cut(s)	1249
MaeII	ACGT	4 cut(s)	66, 583, 646, 991
MaeIII	GTNAC	4 cut(s)	199, 454, 524, 915
MalI	GATC	4 cut(s)	447, 546, 572, 890
MboI	GATC	4 cut(s)	445, 544, 570, 888
MboII	GAAGA	8 cut(s)	83, 737, 794, 806, 830, 842, 1166, 1237
MflI	RGATCY	2 cut(s)	544, 888
MhlI	GDGCHC	5 cut(s)	126, 514, 688, 775, 1101
MluCI	AATT	3 cut(s)	99, 674, 1055
MmeI	TCCRAC	3 cut(s)	286, 629, 1008
MroI	TCCGGA	1 cut(s)	850
MroXI	GAANNNNTTC	1 cut(s)	618
MseI	TTAA	1 cut(s)	1037
MslI	CAYNNNNRTG	1 cut(s)	708
MspCI	CTTAAG	1 cut(s)	1036
MspI	CCGG	3 cut(s)	56, 328, 851
MspR9I	CCNGG	2 cut(s)	56, 57
MvnI	CGCG	3 cut(s)	109, 668, 695
MwoI	GCNNNNNNNGC	3 cut(s)	509, 667, 692
NciI	CCSGG	2 cut(s)	56, 57
NdeII	GATC	4 cut(s)	445, 544, 570, 888
NlaIII	CATG	5 cut(s)	313, 491, 608, 876, 1106
NlaIV	GGNNCC	7 cut(s)	53, 511, 546, 653, 699, 741, 864
NmuCI	GTSAC	3 cut(s)	454, 524, 915
PaeR7I	CTCGAG	1 cut(s)	251
PaqCI	CACCTGC	1 cut(s)	553
PcsI	WCGNNNNNNNCGW	1 cut(s)	426
PdmI	GAANNNNTTC	1 cut(s)	618
PfeI	GAWTC	6 cut(s)	375, 597, 631, 733, 810, 1147
PflFI	GACNNNGTC	1 cut(s)	267
PflMI	CCANNNNNTGG	1 cut(s)	226
PkrI	GCNGC	4 cut(s)	288, 308, 672, 697
PpuMI	RGGWCCY	1 cut(s)	1066
PshAI	GACNNNNGTC	2 cut(s)	990, 1071
Psp124BI	GAGCTC	1 cut(s)	1101
Psp5II	RGGWCCY	1 cut(s)	1066
PspEI	GGTNACC	1 cut(s)	199
PspFI	CCCAGC	1 cut(s)	226
PspN4I	GGNNCC	7 cut(s)	53, 511, 546, 653, 699, 741, 864
PspPI	GGNCC	5 cut(s)	217, 739, 751, 921, 1066
PspPPI	RGGWCCY	1 cut(s)	1066
PsuI	RGATCY	2 cut(s)	544, 888
PsyI	GACNNNGTC	1 cut(s)	267
RsaI	GTAC	8 cut(s)	16, 53, 299, 356, 471, 603, 881, 1049
RsaNI	GTAC	8 cut(s)	15, 52, 298, 355, 470, 602, 880, 1048
RseI	CAYNNNNRTG	1 cut(s)	708
SacI	GAGCTC	1 cut(s)	1101
SaqAI	TTAA	1 cut(s)	1037
SatI	GCNGC	4 cut(s)	287, 307, 671, 696
Sau3AI	GATC	4 cut(s)	445, 544, 570, 888
Sau96I	GGNCC	5 cut(s)	217, 739, 751, 921, 1066
ScrFI	CCNGG	2 cut(s)	56, 57
SduI	GDGCHC	5 cut(s)	126, 514, 688, 775, 1101
SfaNI	GCATC	3 cut(s)	64, 161, 811
Sfr274I	CTCGAG	1 cut(s)	251
SinI	GGWCC	5 cut(s)	217, 739, 751, 921, 1066
SlaI	CTCGAG	1 cut(s)	251
SmaI	CCCGGG	1 cut(s)	57
SmiMI	CAYNNNNRTG	1 cut(s)	708
SmlI	CTYRAG	3 cut(s)	127, 251, 1036
SmoI	CTYRAG	3 cut(s)	127, 251, 1036
Sse9I	AATT	3 cut(s)	99, 674, 1055
SsiI	CCGC	7 cut(s)	49, 77, 107, 306, 386, 503, 695
SspMI	CTAG	1 cut(s)	1249
SstI	GAGCTC	1 cut(s)	1101
StyD4I	CCNGG	2 cut(s)	54, 55
TaaI	ACNGT	5 cut(s)	269, 454, 460, 755, 921
TaiI	ACGT	4 cut(s)	69, 586, 649, 994
TaqI	TCGA	8 cut(s)	69, 154, 252, 277, 367, 420, 1095, 1131
TaqII	GACCGA	1 cut(s)	368
TasI	AATT	3 cut(s)	99, 674, 1055
TatI	WGTACW	2 cut(s)	14, 297
TauI	GCSGC	2 cut(s)	309, 698
TfiI	GAWTC	6 cut(s)	375, 597, 631, 733, 810, 1147
Tru1I	TTAA	1 cut(s)	1037
Tru9I	TTAA	1 cut(s)	1037
TscAI	CASTG	1 cut(s)	463
TseFI	GTSAC	3 cut(s)	454, 524, 915
TseI	GCWGC	2 cut(s)	286, 670
Tsp45I	GTSAC	3 cut(s)	454, 524, 915
TspDTI	ATGAA	9 cut(s)	25, 174, 326, 621, 831, 861, 1019, 1160, 1173
TspGWI	ACGGA	3 cut(s)	522, 557, 1002
TspMI	CCCGGG	1 cut(s)	55
TspRI	CASTG	1 cut(s)	463
Tth111I	GACNNNGTC	1 cut(s)	267
Van91I	CCANNNNNTGG	1 cut(s)	226
Vha464I	CTTAAG	1 cut(s)	1036
VpaK11BI	GGWCC	5 cut(s)	217, 739, 751, 921, 1066
XapI	RAATTY	2 cut(s)	99, 1055
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1109
XhoI	CTCGAG	1 cut(s)	251
XmaI	CCCGGG	1 cut(s)	55
XmnI	GAANNNNTTC	1 cut(s)	618
XspI	CTAG	1 cut(s)	1249
ZraI	GACGTC	1 cut(s)	992

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.