Rw7G027760

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0000124
Physical Location & Seq
Reverse (-)
36543962 .. 36545454
1493 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G027760.1

Sequence Viewer

Length: 1101 bp
ATGACGGTGATGCGCGGTCCACTCTTCGGGGGAGGTGGAAATAGCGAAGTATTGAAGAGATCCAGTCAACTGGTACCCAGAGATTTGGTGACCAAGTCCAGCATCCAGGAGTTCATATTGAGCACCCGGGGTCTGTCCCCTAAAAAGGTGACTGCCATATCTGAACTGGGGCTTACAAGTCTTCTGGATATTGCGTGCACTACCCAGGTTAGCCCTGTGTGGCGGTTGATGGTGCACAACATTGACCTCTCAAACCACACTGTGTCCATTCACGGTCACAACTTTCCCACAAATGCCTTGGAGTTCAACCGTTTAATGGGAATGCTTGACTTGGGTACAGAGATCAAGCTGGGGGCTACCATAGACGCAGGAGAGTATGGTGTCTTTGTGCAGGACTTGTGCGATGGAAAAGGTCGGATACAGGTCTATCTATTGAAGGAGATTGTCATGAATTGGGCTGATGTGGACGACATGTTCCGTATTGCATTTACAATGCTTGCATTGGTTCTGGTGCTATGCCTAGGCACGGGTGACAATGTCGATCCATCCTTGGTACTCCCGCTACTAGAGATGGGGGAGATTGGGAAGAAAAATTGGGCTTCATTCTATGTGAAGACATTACTGGAAGCTGTGACTACTCAGCGGGAATCTGGTGACTATGTAATTGGTGGGTGCCTTGGAGGCTTCAAGAGCCCAATTGTTATGATGGAAAGGAGTAACCGTTCCAAGATGGCAACAAAGTGCGATGTAGATGACGGTGAGTTTGGGCTTGGACTGAGGAAGGGGGTTCATGAGGATATTTTTGATATCAAGCTGGACATGATGGGTGTTAAGGGTGACATCAACAGGCTTACTGGGATTGTTGGAAGGCTGCAACCTGACATGGCCGAGCTGACAAGGAAAGTGGACATTATATCACAGCAGTTACGTAGTTGGAAGAAAGAAGCTGCAGAGATGGTGAGGCGTGAGAGGCCGCCGAGGAATGACAATAGGAAAAATGAGAAGTCGGCGCAGGATGCTGCAATAGAGCTGGAGGAGAACATGGGCACGCGAACAATGAATTCCAAGCAGGTTCCAATACAACAAAAACTTCAGGGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
HMG_box

Protein Analysis

366

Amino Acids

40.56

Weight (kDa)

6.56

Isoelectric Point (pI)

36.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000124)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g10992 FvH4_2g25150 FvH4_2g27910 FvH4_2g27931 FvH4_4g09443 FvH4_4g09490 FvH4_4g15990 FvH4_4g15991 FvH4_6g07180 FvH4_6g40320 FvH4_7g10222 FvH4_7g10251
rosa_chinensis RchiOBHm_Chr2g0155611
rosa_laevigata RLG00000009253 RLG00000009254 RLG00000011848 RLG00000017301 RLG00000017302 RLG00000034909
rosa_multiflora Rmu_co8063658.1_g000001 Rmu_co8240443.1_g000001 Rmu_co8264451.1_g000001 Rmu_co8381937.1_g000001 Rmu_co8419903.1_g000001 Rmu_co8513405.1_g000002 Rmu_co8522915.1_g000001 Rmu_co8522915.1_g000004 Rmu_sc0000279.1_g000024 Rmu_sc0000279.1_g000048 Rmu_sc0000642.1_g000017 Rmu_sc0002045.1_g000015 Rmu_sc0002045.1_g000018 Rmu_sc0002045.1_g000023 Rmu_sc0002045.1_g000028 Rmu_sc0003047.1_g000008 Rmu_sc0003179.1_g000019 Rmu_sc0003179.1_g000020 Rmu_sc0003179.1_g000022 Rmu_sc0003179.1_g000023 Rmu_sc0003422.1_g000011 Rmu_sc0004999.1_g000014 Rmu_sc0005712.1_g000018 Rmu_sc0005712.1_g000023 Rmu_sc0006198.1_g000019 Rmu_sc0006373.1_g000005 Rmu_sc0006514.1_g000028 Rmu_sc0006514.1_g000031 Rmu_sc0007367.1_g000010 Rmu_sc0011475.1_g000002 Rmu_sc0025304.1_g000001 Rmu_ssc0000161.1_g000030 Rmu_ssc0000161.1_g000032 Rmu_ssc0000387.1_g000018
rosa_roxburghii Rroxscaffold_1G00031090 Rroxscaffold_1G00032770 Rroxscaffold_1G00068950 Rroxscaffold_1G00069000 Rroxscaffold_1G00069010 Rroxscaffold_2G00129060 Rroxscaffold_2G00129100 Rroxscaffold_4G00309310 Rroxscaffold_4G00309320 Rroxscaffold_5G00350620 Rroxscaffold_5G00350630 Rroxscaffold_7G00162650 Rroxscaffold_7G00162660 Rroxscaffold_7G00162710
rosa_rugosa Rorug02G0564700 Rorug02G0564700 Rorug03G0343100 Rorug04G0189700 Rorug05G0102800 Rorug05G0102900 Rorug05G0103000 Rorug05G0106500 Rorug05G0106600 Rorug05G0106700 Rorug05G0252800 Rorug07G0182100 Rorug07G0283500 Rorug07G0283600
rosa_samantha Rh1AG004000 Rh1AG004100 Rh1AG004200 Rh1AG004400 Rh1AG004500 Rh1AG004600 Rh1AG004800 Rh1AG004900 Rh1AG005300 Rh1AG007000 Rh1AG115000 Rh1CG049400 Rh1CG055400 Rh1CG111000 Rh1DG053600 Rh1DG053700 Rh1DG059300 Rh1DG119700 Rh1DG177100 Rh1DG177200 Rh2AG353800 Rh2AG354000 Rh2AG354100 Rh2AG354300 Rh2AG354400 Rh2AG354500 Rh2AG354600 Rh2AG354700 Rh2AG642300 Rh2AG642400 Rh2AG642500 Rh2BG336500 Rh2BG336600 Rh2BG336700 Rh2BG336800 Rh2BG336900 Rh2CG299900 Rh2CG300000 Rh2CG300100 Rh2DG337000 Rh2DG337100 Rh3AG246600 Rh3BG121900 Rh3BG122300 Rh3BG122600 Rh3BG122700 Rh3DG304800 Rh3DG304900 Rh4AG148800 Rh4AG249000 Rh4AG249100 Rh4AG249200 Rh4BG182700 Rh4BG182800 Rh4BG182900 Rh4BG254400 Rh4BG254500 Rh4BG254600 Rh4CG155500 Rh4CG155700 Rh4DG057900 Rh4DG058000 Rh4DG058100 Rh4DG058200 Rh4DG129100 Rh5AG364500 Rh5AG364600 Rh5AG364800 Rh5AG365300 Rh5CG363700 Rh5CG497600 Rh5DG239500 Rh5DG239600 Rh6AG173500 Rh6AG175400 Rh6BG075900 Rh6BG076300 Rh6BG076400 Rh6BG076500 Rh6BG076600 Rh6CG151000 Rh6CG151200 Rh6CG151300 Rh6CG151400 Rh6CG205200 Rh6CG205300 Rh6CG419700 Rh6CG419900 Rh6CG420100 Rh6DG498700 Rh6DG498800 Rh7AG329000 Rh7AG329100 Rh7AG329300 Rh7AG329400 Rh7AG353000 Rh7AG353100 Rh7AG353300 Rh7AG353400 Rh7AG353500 Rh7CG346400 Rh7CG346500 Rh7CG346700 Rh7CG370800 Rh7CG370900 Rh7CG371000 Rh7CG371100 Rh7DG325000 Rh7DG325100 Rh7DG325200 Rh7DG325300 Rh7DG353100 Rh7DG353200 Rh7DG353300 Rh7DG363500 Rh7DG364000
rosa_wichuraiana Rw0G002290 Rw0G012780 Rw1G000260 Rw1G000270 Rw1G010400 Rw1G010410 Rw1G010420 Rw1G010430 Rw1G010440 Rw2G003210 Rw2G003220 Rw4G010970 Rw5G048520 Rw6G013320 Rw6G013470 Rw6G014940 Rw6G016570 Rw6G016590 Rw6G016600 Rw6G016610 Rw6G016620 Rw6G035450 Rw7G027760 Rw7G030460

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1060
Acc65I GGTACC 1 cut(s) 73
AccB1I GGYRCC 2 cut(s) 73, 672
AccII CGCG 2 cut(s) 15, 1051
AciI CCGC 5 cut(s) 15, 223, 560, 643, 974
AclWI GGATC 2 cut(s) 54, 536
AcoI YGGCCR 1 cut(s) 885
AcsI RAATTY 1 cut(s) 1060
AcuI CTGAAG 1 cut(s) 1076
AdeI CACNNNGTG 1 cut(s) 262
AfaI GTAC 3 cut(s) 75, 337, 555
AfiI CCNNNNNNNGG 4 cut(s) 26, 145, 316, 526
AflIII ACRYGT 1 cut(s) 471
AgsI TTSAA 4 cut(s) 55, 307, 436, 688
AjnI CCWGG 2 cut(s) 105, 204
AloI GAACNNNNNNTCC 4 cut(s) 458, 490, 706, 738
AluBI AGCT 6 cut(s) 349, 629, 814, 892, 947, 1030
AluI AGCT 6 cut(s) 349, 629, 814, 892, 947, 1030
Alw21I GWGCWC 3 cut(s) 125, 200, 237
Alw44I GTGCAC 2 cut(s) 196, 233
AlwI GGATC 2 cut(s) 54, 536
Ama87I CYCGRG 1 cut(s) 126
AoxI GGCC 2 cut(s) 885, 971
ApaLI GTGCAC 2 cut(s) 196, 233
ApeKI GCWGC 3 cut(s) 871, 947, 1019
ApoI RAATTY 1 cut(s) 1060
ArsI GACNNNNNNTTYG 2 cut(s) 746, 778
Asp718I GGTACC 1 cut(s) 73
AspA2I CCTAGG 1 cut(s) 520
AspLEI GCGC 2 cut(s) 15, 1012
AspS9I GGNCC 1 cut(s) 17
AsuC2I CCSGG 2 cut(s) 127, 128
AsuHPI GGTGA 8 cut(s) 19, 100, 160, 542, 665, 770, 848, 970
AvaI CYCGRG 1 cut(s) 126
AvaII GGWCC 1 cut(s) 17
AvrII CCTAGG 1 cut(s) 520
BaeGI GKGCMC 3 cut(s) 200, 237, 1049
BanI GGYRCC 2 cut(s) 73, 672
BanII GRGCYC 1 cut(s) 695
BbsI GAAGAC 2 cut(s) 173, 620
Bbv12I GWGCWC 3 cut(s) 125, 200, 237
BbvI GCAGC 3 cut(s) 858, 934, 1006
BccI CCATC 8 cut(s) 223, 398, 553, 565, 700, 724, 817, 949
BciT130I CCWGG 2 cut(s) 107, 206
BciVI GTATCC 1 cut(s) 411
BcnI CCSGG 2 cut(s) 127, 128
BfaI CTAG 2 cut(s) 521, 566
BfmI CTRYAG 1 cut(s) 948
BfuAI ACCTGC 1 cut(s) 1060
BfuI GTATCC 1 cut(s) 411
BglI GCCNNNNNGGC 1 cut(s) 681
BisI GCNGC 4 cut(s) 872, 948, 974, 1020
BlnI CCTAGG 1 cut(s) 520
BlsI GCNGC 4 cut(s) 873, 949, 975, 1021
Bme1390I CCNGG 4 cut(s) 107, 127, 128, 206
Bme18I GGWCC 1 cut(s) 17
BmeT110I CYCGRG 1 cut(s) 126
BmgT120I GGNCC 1 cut(s) 17
BmiI GGNNCC 3 cut(s) 75, 674, 1074
BmrFI CCNGG 4 cut(s) 107, 127, 128, 206
BmrI ACTGGG 2 cut(s) 176, 864
BmsI GCATC 2 cut(s) 111, 1006
BmuI ACTGGG 2 cut(s) 176, 864
BpiI GAAGAC 2 cut(s) 173, 620
BpmI CTGGAG 1 cut(s) 1052
BpuMI CCSGG 2 cut(s) 127, 128
BsaAI YACGTR 1 cut(s) 929
BsaJI CCNNGG 8 cut(s) 126, 127, 204, 297, 520, 549, 676, 977
BsaXI ACNNNNNCTCC 2 cut(s) 706, 736
Bsc4I CCNNNNNNNGG 4 cut(s) 26, 145, 316, 526
Bse1I ACTGG 5 cut(s) 63, 75, 171, 627, 859
BseBI CCWGG 2 cut(s) 107, 206
BseDI CCNNGG 8 cut(s) 126, 127, 204, 297, 520, 549, 676, 977
BseGI GGATG 3 cut(s) 102, 545, 1021
BseLI CCNNNNNNNGG 4 cut(s) 26, 145, 316, 526
BseMII CTCAG 2 cut(s) 653, 767
BseNI ACTGG 5 cut(s) 63, 75, 171, 627, 859
BseRI GAGGAG 1 cut(s) 1049
BseSI GKGCMC 3 cut(s) 200, 237, 1049
BseXI GCAGC 3 cut(s) 858, 934, 1006
BseYI CCCAGC 1 cut(s) 349
BsgI GTGCAG 1 cut(s) 410
Bsh1236I CGCG 2 cut(s) 15, 1051
BshFI GGCC 2 cut(s) 887, 973
BshNI GGYRCC 2 cut(s) 73, 672
BsiHKAI GWGCWC 3 cut(s) 125, 200, 237
BsiHKCI CYCGRG 1 cut(s) 126
BsiSI CCGG 1 cut(s) 127
BslFI GGGAC 1 cut(s) 121
BslI CCNNNNNNNGG 4 cut(s) 26, 145, 316, 526
BsmFI GGGAC 1 cut(s) 121
BsmI GAATGC 1 cut(s) 327
BsnI GGCC 2 cut(s) 887, 973
BsoBI CYCGRG 1 cut(s) 126
Bsp1286I GDGCHC 5 cut(s) 125, 200, 237, 695, 1049
Bsp143I GATC 3 cut(s) 59, 342, 541
BspACI CCGC 5 cut(s) 15, 223, 560, 643, 974
BspANI GGCC 2 cut(s) 887, 973
BspCNI CTCAG 2 cut(s) 652, 768
BspFNI CGCG 2 cut(s) 15, 1051
BspHI TCATGA 2 cut(s) 447, 790
BspLI GGNNCC 3 cut(s) 75, 674, 1074
BspMAI CTGCAG 1 cut(s) 952
BspMI ACCTGC 1 cut(s) 1060
BspPI GGATC 2 cut(s) 54, 536
BspT107I GGYRCC 2 cut(s) 73, 672
BsrI ACTGG 5 cut(s) 63, 75, 171, 627, 859
BssECI CCNNGG 8 cut(s) 126, 127, 204, 297, 520, 549, 676, 977
BssMI GATC 3 cut(s) 59, 342, 541
BssT1I CCWWGG 4 cut(s) 297, 520, 549, 676
Bst2UI CCWGG 2 cut(s) 107, 206
Bst4CI ACNGT 6 cut(s) 7, 262, 275, 311, 722, 758
Bst6I CTCTTC 2 cut(s) 29, 50
BstBAI YACGTR 1 cut(s) 929
BstC8I GCNNGC 3 cut(s) 196, 498, 1049
BstDEI CTNAG 2 cut(s) 639, 776
BstEII GGTNACC 1 cut(s) 88
BstF5I GGATG 3 cut(s) 102, 545, 1021
BstFNI CGCG 2 cut(s) 15, 1051
BstHHI GCGC 2 cut(s) 15, 1012
BstKTI GATC 3 cut(s) 62, 345, 544
BstMBI GATC 3 cut(s) 59, 342, 541
BstMWI GCNNNNNNNGC 4 cut(s) 681, 690, 970, 1016
BstNI CCWGG 2 cut(s) 107, 206
BstNSI RCATGY 1 cut(s) 475
BstPI GGTNACC 1 cut(s) 88
BstSCI CCNGG 4 cut(s) 105, 125, 126, 204
BstSFI CTRYAG 1 cut(s) 948
BstSLI GKGCMC 3 cut(s) 200, 237, 1049
BstSNI TACGTA 1 cut(s) 929
BstUI CGCG 2 cut(s) 15, 1051
BstV1I GCAGC 3 cut(s) 858, 934, 1006
BstV2I GAAGAC 2 cut(s) 173, 620
BstX2I RGATCY 1 cut(s) 59
BstXI CCANNNNNNTGG 2 cut(s) 70, 85
BstYI RGATCY 1 cut(s) 59
BsuI GTATCC 1 cut(s) 411
BsuRI GGCC 2 cut(s) 887, 973
BtgZI GCGATG 2 cut(s) 417, 759
BtsCI GGATG 3 cut(s) 102, 545, 1021
BtsIMutI CAGTG 1 cut(s) 258
BveI ACCTGC 1 cut(s) 1060
Cac8I GCNNGC 3 cut(s) 196, 498, 1049
CciI TCATGA 2 cut(s) 447, 790
CfoI GCGC 2 cut(s) 15, 1012
Cfr13I GGNCC 1 cut(s) 17
Cfr9I CCCGGG 1 cut(s) 126
CseI GACGC 1 cut(s) 374
Csp6I GTAC 3 cut(s) 74, 336, 554
CspCI CAANNNNNGTGG 2 cut(s) 885, 920
CviAII CATG 6 cut(s) 448, 472, 791, 820, 883, 1042
CviQI GTAC 3 cut(s) 74, 336, 554
DdeI CTNAG 2 cut(s) 639, 776
DpnI GATC 3 cut(s) 61, 344, 543
DpnII GATC 3 cut(s) 59, 342, 541
DraIII CACNNNGTG 1 cut(s) 262
EaeI YGGCCR 1 cut(s) 885
Eam1104I CTCTTC 2 cut(s) 29, 50
EarI CTCTTC 2 cut(s) 29, 50
Eco105I TACGTA 1 cut(s) 929
Eco130I CCWWGG 4 cut(s) 297, 520, 549, 676
Eco24I GRGCYC 1 cut(s) 695
Eco32I GATATC 1 cut(s) 808
Eco47I GGWCC 1 cut(s) 17
Eco57I CTGAAG 1 cut(s) 1076
Eco88I CYCGRG 1 cut(s) 126
Eco91I GGTNACC 1 cut(s) 88
EcoO65I GGTNACC 1 cut(s) 88
EcoRI GAATTC 1 cut(s) 1060
EcoRII CCWGG 2 cut(s) 105, 204
EcoRV GATATC 1 cut(s) 808
EcoT14I CCWWGG 4 cut(s) 297, 520, 549, 676
EcoT38I GRGCYC 1 cut(s) 695
ErhI CCWWGG 4 cut(s) 297, 520, 549, 676
FaeI CATG 6 cut(s) 451, 475, 794, 823, 886, 1045
FaqI GGGAC 1 cut(s) 121
FatI CATG 6 cut(s) 447, 471, 790, 819, 882, 1041
FauI CCCGC 2 cut(s) 567, 636
Fnu4HI GCNGC 4 cut(s) 872, 948, 974, 1020
FokI GGATG 3 cut(s) 89, 532, 1028
FriOI GRGCYC 1 cut(s) 695
Fsp4HI GCNGC 4 cut(s) 872, 948, 974, 1020
FspBI CTAG 2 cut(s) 521, 566
GlaI GCGC 2 cut(s) 14, 1011
GluI GCNGC 4 cut(s) 872, 948, 974, 1020
GsaI CCCAGC 1 cut(s) 353
GsuI CTGGAG 1 cut(s) 1052
HaeIII GGCC 2 cut(s) 887, 973
HapII CCGG 1 cut(s) 127
HgaI GACGC 1 cut(s) 374
HhaI GCGC 2 cut(s) 15, 1012
Hin1II CATG 6 cut(s) 451, 475, 794, 823, 886, 1045
Hin6I GCGC 2 cut(s) 13, 1010
HinP1I GCGC 2 cut(s) 13, 1010
HincII GTYRAC 1 cut(s) 68
HindII GTYRAC 1 cut(s) 68
HinfI GANTC 1 cut(s) 647
HpaII CCGG 1 cut(s) 127
HphI GGTGA 8 cut(s) 19, 100, 160, 542, 665, 770, 848, 970
Hpy166II GTNNAC 6 cut(s) 20, 68, 198, 235, 466, 907
Hpy188I TCNGA 2 cut(s) 163, 417
Hpy188III TCNNGA 4 cut(s) 185, 448, 688, 791
Hpy8I GTNNAC 6 cut(s) 20, 68, 198, 235, 466, 907
HpyAV CCTTC 3 cut(s) 430, 775, 861
HpyCH4III ACNGT 6 cut(s) 7, 262, 275, 311, 722, 758
HpyCH4IV ACGT 1 cut(s) 928
HpyCH4V TGCA 8 cut(s) 198, 235, 391, 485, 500, 874, 950, 1022
HpyF10VI GCNNNNNNNGC 4 cut(s) 681, 690, 970, 1016
HpyF3I CTNAG 2 cut(s) 639, 776
HpySE526I ACGT 1 cut(s) 928
Hsp92II CATG 6 cut(s) 451, 475, 794, 823, 886, 1045
HspAI GCGC 2 cut(s) 13, 1010
KpnI GGTACC 1 cut(s) 77
Kzo9I GATC 3 cut(s) 59, 342, 541
Lsp1109I GCAGC 3 cut(s) 858, 934, 1006
LweI GCATC 2 cut(s) 111, 1006
MaeI CTAG 2 cut(s) 521, 566
MaeII ACGT 1 cut(s) 928
MaeIII GTNAC 9 cut(s) 88, 148, 275, 530, 631, 653, 716, 836, 924
MalI GATC 3 cut(s) 61, 344, 543
MboI GATC 3 cut(s) 59, 342, 541
MboII GAAGA 6 cut(s) 16, 67, 173, 598, 625, 949
MfeI CAATTG 1 cut(s) 696
MflI RGATCY 1 cut(s) 59
MhlI GDGCHC 5 cut(s) 125, 200, 237, 695, 1049
MluCI AATT 5 cut(s) 451, 592, 663, 696, 1060
MmeI TCCRAC 3 cut(s) 395, 844, 914
MnlI CCTC 9 cut(s) 26, 257, 674, 771, 787, 954, 963, 972, 1027
MseI TTAA 2 cut(s) 314, 831
MspA1I CMGCKG 1 cut(s) 643
MspI CCGG 1 cut(s) 127
MspR9I CCNGG 4 cut(s) 107, 127, 128, 206
MunI CAATTG 1 cut(s) 696
Mva1269I GAATGC 1 cut(s) 327
MvaI CCWGG 2 cut(s) 107, 206
MvnI CGCG 2 cut(s) 15, 1051
MwoI GCNNNNNNNGC 4 cut(s) 681, 690, 970, 1016
NciI CCSGG 2 cut(s) 127, 128
NdeII GATC 3 cut(s) 59, 342, 541
NlaIII CATG 6 cut(s) 451, 475, 794, 823, 886, 1045
NlaIV GGNNCC 3 cut(s) 75, 674, 1074
NmeAIII GCCGAG 2 cut(s) 913, 1002
NmuCI GTSAC 7 cut(s) 88, 148, 275, 530, 631, 653, 836
NspI RCATGY 1 cut(s) 475
PagI TCATGA 2 cut(s) 447, 790
PciI ACATGT 1 cut(s) 471
PctI GAATGC 1 cut(s) 327
PfeI GAWTC 1 cut(s) 647
PflFI GACNNNGTC 2 cut(s) 94, 536
PfoI TCCNGGA 1 cut(s) 105
PkrI GCNGC 4 cut(s) 873, 949, 975, 1021
Ppu21I YACGTR 1 cut(s) 929
PscI ACATGT 1 cut(s) 471
Psp6I CCWGG 2 cut(s) 105, 204
PspEI GGTNACC 1 cut(s) 88
PspFI CCCAGC 1 cut(s) 349
PspGI CCWGG 2 cut(s) 105, 204
PspN4I GGNNCC 3 cut(s) 75, 674, 1074
PspPI GGNCC 1 cut(s) 17
PstI CTGCAG 1 cut(s) 952
PsuI RGATCY 1 cut(s) 59
PsyI GACNNNGTC 2 cut(s) 94, 536
RsaI GTAC 3 cut(s) 75, 337, 555
RsaNI GTAC 3 cut(s) 74, 336, 554
SaqAI TTAA 2 cut(s) 314, 831
SatI GCNGC 4 cut(s) 872, 948, 974, 1020
Sau3AI GATC 3 cut(s) 59, 342, 541
Sau96I GGNCC 1 cut(s) 17
ScrFI CCNGG 4 cut(s) 107, 127, 128, 206
SduI GDGCHC 5 cut(s) 125, 200, 237, 695, 1049
SfaNI GCATC 2 cut(s) 111, 1006
SfcI CTRYAG 1 cut(s) 948
SinI GGWCC 1 cut(s) 17
SmaI CCCGGG 1 cut(s) 128
SnaBI TACGTA 1 cut(s) 929
Sse9I AATT 5 cut(s) 451, 592, 663, 696, 1060
SsiI CCGC 5 cut(s) 15, 223, 560, 643, 974
SspMI CTAG 2 cut(s) 521, 566
StyD4I CCNGG 4 cut(s) 105, 125, 126, 204
StyI CCWWGG 4 cut(s) 297, 520, 549, 676
TaaI ACNGT 6 cut(s) 7, 262, 275, 311, 722, 758
TaiI ACGT 1 cut(s) 931
TaqI TCGA 1 cut(s) 540
TasI AATT 5 cut(s) 451, 592, 663, 696, 1060
TauI GCSGC 1 cut(s) 976
TfiI GAWTC 1 cut(s) 647
Tru1I TTAA 2 cut(s) 314, 831
Tru9I TTAA 2 cut(s) 314, 831
TscAI CASTG 1 cut(s) 265
TseFI GTSAC 7 cut(s) 88, 148, 275, 530, 631, 653, 836
TseI GCWGC 3 cut(s) 871, 947, 1019
Tsp45I GTSAC 7 cut(s) 88, 148, 275, 530, 631, 653, 836
TspDTI ATGAA 5 cut(s) 103, 464, 591, 779, 1073
TspGWI ACGGA 1 cut(s) 467
TspMI CCCGGG 1 cut(s) 126
TspRI CASTG 1 cut(s) 265
Tth111I GACNNNGTC 2 cut(s) 94, 536
VneI GTGCAC 2 cut(s) 196, 233
VpaK11BI GGWCC 1 cut(s) 17
XapI RAATTY 1 cut(s) 1060
XceI RCATGY 1 cut(s) 475
XcmI CCANNNNNNNNNTGG 2 cut(s) 163, 295
XmaI CCCGGG 1 cut(s) 126
XmaJI CCTAGG 1 cut(s) 520
XspI CTAG 2 cut(s) 521, 566
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.