RchiOBHm_Chr2g0155611

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000124
Physical Location & Seq
Forward (+)
72490388 .. 72492292
1905 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1593 bp
ATGGGGGACTTGGTGACAAATTCCAAACCCTATGAGTTCACACTCACCGTATCTGGACTCTCCGTTGAAAAGGTGGCTGCCATAGCTGAGATGGGCTTTGATGGTCTCTTGCAGATTGGATGCAACACTCTTGTTGGACCTGTCTGGAGGCTGATGGTGCACAGTGTTGACATCGGCAACCGCAGAGTGTCGATAATGGGCCAGAACTTTGCAGTTACTCCACATGAGTTTGGCCGTGTAATGGGAGTGCAGGATGGAGGCTCTGACTTTGAACTGGGGACTGCCACAGACGTTGCTGAGTATGGCATGATTGTTGAAGACATGTGTGACAGAGAAGGAAGGATCCAGTACTGTCATCTGAAGGAAATAGTACGGGACCGTGAGGAAGCCGACGACAAGTTCAGGATCGCATTTTCGTTGCTTGCACTAGGTTTGGTTCTGTGCCCTACAACAGATGACGCTGTTGACACGTCTCTGATTCTACCCCTTCTGGAAACGGGACGCATTGGGCAGAAGAACTGGGCTTCCTTTTGTCTCCAAAGATTGCTAGACTCTGTGACGGCCCAGAGGGAACATGGGGACGGTGTTGTTGGGGGGTGTGTGCTCTTCCTCCAGGTTCTATACTTCGAGAAGGTCGGCTCGGCTTGTTTTCATATTGATAGGTCTATACTTCCACTTATGGCCTGGGGGGACTTTGAGGTAAGGGAGTTGATAACCAGGGTTAGGACATATGGTGGCTTTAAGAGTCCAATTGTCATGATGGAGAGGAACAAGCGGGTGAAAATGGCTAGTAAATGCGCCGATGATGATGGTGAGTTTGGACTCGGACTGAGGAAGTCAGTTCATGAGGACATCTTCGACGTCAAGTTGGAGCTCATGGGGGTCAAGGGTGACGTGTGGAGGCTCATGGATGCTTGTGGGAGGATTCAGCCTGATGTGGCCGAACTAGCAAGGAAAGTGGAGATTATAGCACATCAGATAAGCGGTTTGAGGGAGGAATGTGCCGACATGGTGAAGATCCAACTGCTGAGATCGGCAAACAGGAGGGGGGATGACTGCAACGTTCACACAGTCCCTGTGTGGAAACCGCGGCAGAGGGATGGAATGGGGAGTGGAGATTCAGTCCTCCATGCTGACACATTTCTGGAGGAAGAGAGCTTGCAGCGAATGAAGGCAAAATCAAAGCTATGTGATAATGCTTTTGGTAAGGCAGTATCTGCCAGCTCAAGCAGTCCTGGTGCCGCCCCAACAAGAGAGATGAGACCATATCAGGGCGGTTGTGTGCCTGAATCCAAGGCAGTTGTATCTCCACATGCCAGGGCCATGTTCACTTATGCAGTCACCCGCAACGAGGAGGTCAATCATGTGATTAGTTCGGGCTGTAATGGAGCAGGGCTCACTAATGCCAAAAGTTGGATGCTGCCAGGACCTTACATGCTGATGCACCCTATAGGGAATGACGACATTCTCCTAATCAATTACATTTTCATGGGTGGGAAGAAAGTTACGGTGGAGGAGGGAAGGTTAGCACACAAACTCGATGGGAACTATGGTTGCTTCAACCGGGAATCAGAAGGCACTACTTTACCGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
HMG_box

Protein Analysis

530

Amino Acids

58.4

Weight (kDa)

5.71

Isoelectric Point (pI)

34.67

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000124)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g10992 FvH4_2g25150 FvH4_2g27910 FvH4_2g27931 FvH4_4g09443 FvH4_4g09490 FvH4_4g15990 FvH4_4g15991 FvH4_6g07180 FvH4_6g40320 FvH4_7g10222 FvH4_7g10251
rosa_chinensis RchiOBHm_Chr2g0155611
rosa_laevigata RLG00000009253 RLG00000009254 RLG00000011848 RLG00000017301 RLG00000017302 RLG00000034909
rosa_multiflora Rmu_co8063658.1_g000001 Rmu_co8240443.1_g000001 Rmu_co8264451.1_g000001 Rmu_co8381937.1_g000001 Rmu_co8419903.1_g000001 Rmu_co8513405.1_g000002 Rmu_co8522915.1_g000001 Rmu_co8522915.1_g000004 Rmu_sc0000279.1_g000024 Rmu_sc0000279.1_g000048 Rmu_sc0000642.1_g000017 Rmu_sc0002045.1_g000015 Rmu_sc0002045.1_g000018 Rmu_sc0002045.1_g000023 Rmu_sc0002045.1_g000028 Rmu_sc0003047.1_g000008 Rmu_sc0003179.1_g000019 Rmu_sc0003179.1_g000020 Rmu_sc0003179.1_g000022 Rmu_sc0003179.1_g000023 Rmu_sc0003422.1_g000011 Rmu_sc0004999.1_g000014 Rmu_sc0005712.1_g000018 Rmu_sc0005712.1_g000023 Rmu_sc0006198.1_g000019 Rmu_sc0006373.1_g000005 Rmu_sc0006514.1_g000028 Rmu_sc0006514.1_g000031 Rmu_sc0007367.1_g000010 Rmu_sc0011475.1_g000002 Rmu_sc0025304.1_g000001 Rmu_ssc0000161.1_g000030 Rmu_ssc0000161.1_g000032 Rmu_ssc0000387.1_g000018
rosa_roxburghii Rroxscaffold_1G00031090 Rroxscaffold_1G00032770 Rroxscaffold_1G00068950 Rroxscaffold_1G00069000 Rroxscaffold_1G00069010 Rroxscaffold_2G00129060 Rroxscaffold_2G00129100 Rroxscaffold_4G00309310 Rroxscaffold_4G00309320 Rroxscaffold_5G00350620 Rroxscaffold_5G00350630 Rroxscaffold_7G00162650 Rroxscaffold_7G00162660 Rroxscaffold_7G00162710
rosa_rugosa Rorug02G0564700 Rorug02G0564700 Rorug03G0343100 Rorug04G0189700 Rorug05G0102800 Rorug05G0102900 Rorug05G0103000 Rorug05G0106500 Rorug05G0106600 Rorug05G0106700 Rorug05G0252800 Rorug07G0182100 Rorug07G0283500 Rorug07G0283600
rosa_samantha Rh1AG004000 Rh1AG004100 Rh1AG004200 Rh1AG004400 Rh1AG004500 Rh1AG004600 Rh1AG004800 Rh1AG004900 Rh1AG005300 Rh1AG007000 Rh1AG115000 Rh1CG049400 Rh1CG055400 Rh1CG111000 Rh1DG053600 Rh1DG053700 Rh1DG059300 Rh1DG119700 Rh1DG177100 Rh1DG177200 Rh2AG353800 Rh2AG354000 Rh2AG354100 Rh2AG354300 Rh2AG354400 Rh2AG354500 Rh2AG354600 Rh2AG354700 Rh2AG642300 Rh2AG642400 Rh2AG642500 Rh2BG336500 Rh2BG336600 Rh2BG336700 Rh2BG336800 Rh2BG336900 Rh2CG299900 Rh2CG300000 Rh2CG300100 Rh2DG337000 Rh2DG337100 Rh3AG246600 Rh3BG121900 Rh3BG122300 Rh3BG122600 Rh3BG122700 Rh3DG304800 Rh3DG304900 Rh4AG148800 Rh4AG249000 Rh4AG249100 Rh4AG249200 Rh4BG182700 Rh4BG182800 Rh4BG182900 Rh4BG254400 Rh4BG254500 Rh4BG254600 Rh4CG155500 Rh4CG155700 Rh4DG057900 Rh4DG058000 Rh4DG058100 Rh4DG058200 Rh4DG129100 Rh5AG364500 Rh5AG364600 Rh5AG364800 Rh5AG365300 Rh5CG363700 Rh5CG497600 Rh5DG239500 Rh5DG239600 Rh6AG173500 Rh6AG175400 Rh6BG075900 Rh6BG076300 Rh6BG076400 Rh6BG076500 Rh6BG076600 Rh6CG151000 Rh6CG151200 Rh6CG151300 Rh6CG151400 Rh6CG205200 Rh6CG205300 Rh6CG419700 Rh6CG419900 Rh6CG420100 Rh6DG498700 Rh6DG498800 Rh7AG329000 Rh7AG329100 Rh7AG329300 Rh7AG329400 Rh7AG353000 Rh7AG353100 Rh7AG353300 Rh7AG353400 Rh7AG353500 Rh7CG346400 Rh7CG346500 Rh7CG346700 Rh7CG370800 Rh7CG370900 Rh7CG371000 Rh7CG371100 Rh7DG325000 Rh7DG325100 Rh7DG325200 Rh7DG325300 Rh7DG353100 Rh7DG353200 Rh7DG353300 Rh7DG363500 Rh7DG364000
rosa_wichuraiana Rw0G002290 Rw0G012780 Rw1G000260 Rw1G000270 Rw1G010400 Rw1G010410 Rw1G010420 Rw1G010430 Rw1G010440 Rw2G003210 Rw2G003220 Rw4G010970 Rw5G048520 Rw6G013320 Rw6G013470 Rw6G014940 Rw6G016570 Rw6G016590 Rw6G016600 Rw6G016610 Rw6G016620 Rw6G035450 Rw7G027760 Rw7G030460

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 864
AccB1I GGYRCC 1 cut(s) 1238
AccB7I CCANNNNNTGG 1 cut(s) 1413
AccII CGCG 1 cut(s) 1090
AciI CCGC 8 cut(s) 181, 775, 984, 1088, 1090, 1242, 1275, 1345
AclI AACGTT 1 cut(s) 1062
AclWI GGATC 4 cut(s) 337, 350, 413, 1012
AcoI YGGCCR 2 cut(s) 232, 939
AcsI RAATTY 1 cut(s) 19
AcuI CTGAAG 1 cut(s) 380
AcyI GRCGYC 1 cut(s) 861
AfaI GTAC 2 cut(s) 350, 372
AfiI CCNNNNNNNGG 5 cut(s) 241, 723, 1271, 1351, 1413
AflIII ACRYGT 3 cut(s) 321, 468, 894
AgsI TTSAA 4 cut(s) 68, 272, 317, 1561
AjiI CACGTC 2 cut(s) 471, 895
AjnI CCWGG 6 cut(s) 612, 683, 716, 1234, 1316, 1423
AloI GAACNNNNNNTCC 2 cut(s) 509, 541
AluBI AGCT 5 cut(s) 86, 874, 1158, 1186, 1224
AluI AGCT 5 cut(s) 86, 874, 1158, 1186, 1224
Alw21I GWGCWC 3 cut(s) 162, 606, 876
Alw26I GTCTC 4 cut(s) 110, 477, 539, 1255
Alw44I GTGCAC 1 cut(s) 158
AlwI GGATC 4 cut(s) 337, 350, 413, 1012
AlwNI CAGNNNCTG 2 cut(s) 1076, 1217
AoxI GGCC 6 cut(s) 199, 232, 561, 681, 939, 1320
ApaLI GTGCAC 1 cut(s) 158
ApeKI GCWGC 3 cut(s) 77, 1162, 1420
ApoI RAATTY 1 cut(s) 19
AspLEI GCGC 1 cut(s) 800
AspS9I GGNCC 6 cut(s) 137, 199, 376, 562, 1320, 1427
AsuC2I CCSGG 1 cut(s) 1565
AsuHPI GGTGA 7 cut(s) 25, 37, 790, 824, 902, 1024, 1333
AvaII GGWCC 3 cut(s) 137, 376, 1427
BaeGI GKGCMC 2 cut(s) 162, 446
BamHI GGATCC 1 cut(s) 342
BanI GGYRCC 1 cut(s) 1238
BanII GRGCYC 2 cut(s) 876, 1398
BbsI GAAGAC 1 cut(s) 324
Bbv12I GWGCWC 3 cut(s) 162, 606, 876
BbvI GCAGC 3 cut(s) 64, 1174, 1407
BccI CCATC 8 cut(s) 85, 95, 148, 248, 754, 803, 1094, 1535
BceAI ACGGC 2 cut(s) 219, 576
BciT130I CCWGG 6 cut(s) 614, 685, 718, 1236, 1318, 1425
BcnI CCSGG 1 cut(s) 1565
BcoDI GTCTC 4 cut(s) 110, 477, 539, 1255
BfaI CTAG 4 cut(s) 428, 548, 789, 947
BfmI CTRYAG 1 cut(s) 1449
BisI GCNGC 5 cut(s) 78, 1091, 1163, 1242, 1421
BlsI GCNGC 5 cut(s) 79, 1092, 1164, 1243, 1422
BmcAI AGTACT 1 cut(s) 350
Bme1390I CCNGG 7 cut(s) 614, 685, 718, 1236, 1318, 1425, 1565
Bme18I GGWCC 3 cut(s) 137, 376, 1427
BmgBI CACGTC 2 cut(s) 471, 895
BmgT120I GGNCC 6 cut(s) 137, 199, 376, 562, 1320, 1427
BmiI GGNNCC 3 cut(s) 344, 377, 1240
BmrFI CCNGG 7 cut(s) 614, 685, 718, 1236, 1318, 1425, 1565
BmrI ACTGGG 2 cut(s) 284, 529
BmsI GCATC 4 cut(s) 110, 901, 1407, 1431
BmuI ACTGGG 2 cut(s) 284, 529
BpiI GAAGAC 1 cut(s) 324
BplI GAGNNNNNCTC 2 cut(s) 1380, 1412
BpmI CTGGAG 3 cut(s) 166, 596, 1166
BpuEI CTTGAG 1 cut(s) 1210
BpuMI CCSGG 1 cut(s) 1565
BsaHI GRCGYC 1 cut(s) 861
BsaI GGTCTC 2 cut(s) 110, 1255
BsaJI CCNNGG 5 cut(s) 684, 717, 1088, 1293, 1317
BsaXI ACNNNNNCTCC 4 cut(s) 1107, 1137, 1508, 1538
Bsc4I CCNNNNNNNGG 5 cut(s) 241, 723, 1271, 1351, 1413
Bse1I ACTGG 3 cut(s) 279, 346, 524
BseBI CCWGG 6 cut(s) 614, 685, 718, 1236, 1318, 1425
BseDI CCNNGG 5 cut(s) 684, 717, 1088, 1293, 1317
BseGI GGATG 6 cut(s) 125, 259, 916, 1057, 1105, 1422
BseLI CCNNNNNNNGG 5 cut(s) 241, 723, 1271, 1351, 1413
BseMII CTCAG 4 cut(s) 78, 288, 821, 1019
BseNI ACTGG 3 cut(s) 279, 346, 524
BseRI GAGGAG 2 cut(s) 1367, 1529
BseSI GKGCMC 2 cut(s) 162, 446
BseXI GCAGC 3 cut(s) 64, 1174, 1407
BsgI GTGCAG 1 cut(s) 269
Bsh1236I CGCG 1 cut(s) 1090
BshFI GGCC 6 cut(s) 201, 234, 563, 683, 941, 1322
BshNI GGYRCC 1 cut(s) 1238
BsiHKAI GWGCWC 3 cut(s) 162, 606, 876
BsiSI CCGG 1 cut(s) 1564
BslFI GGGAC 7 cut(s) 20, 292, 389, 513, 593, 704, 1058
BslI CCNNNNNNNGG 5 cut(s) 241, 723, 1271, 1351, 1413
BsmAI GTCTC 4 cut(s) 110, 477, 539, 1255
BsmBI CGTCTC 1 cut(s) 477
BsmFI GGGAC 7 cut(s) 20, 292, 389, 513, 593, 704, 1058
BsnI GGCC 6 cut(s) 201, 234, 563, 683, 941, 1322
Bso31I GGTCTC 2 cut(s) 110, 1255
Bsp1286I GDGCHC 5 cut(s) 162, 446, 606, 876, 1398
Bsp143I GATC 4 cut(s) 342, 405, 1017, 1031
BspACI CCGC 8 cut(s) 181, 775, 984, 1088, 1090, 1242, 1275, 1345
BspANI GGCC 6 cut(s) 201, 234, 563, 683, 941, 1322
BspCNI CTCAG 4 cut(s) 79, 289, 822, 1020
BspFNI CGCG 1 cut(s) 1090
BspHI TCATGA 2 cut(s) 756, 844
BspLI GGNNCC 3 cut(s) 344, 377, 1240
BspPI GGATC 4 cut(s) 337, 350, 413, 1012
BspQI GCTCTTC 1 cut(s) 611
BspT107I GGYRCC 1 cut(s) 1238
BspTNI GGTCTC 2 cut(s) 110, 1255
BsrI ACTGG 3 cut(s) 279, 346, 524
BssECI CCNNGG 5 cut(s) 684, 717, 1088, 1293, 1317
BssMI GATC 4 cut(s) 342, 405, 1017, 1031
BssNI GRCGYC 1 cut(s) 861
BssT1I CCWWGG 1 cut(s) 1293
Bst2UI CCWGG 6 cut(s) 614, 685, 718, 1236, 1318, 1425
Bst4CI ACNGT 8 cut(s) 49, 164, 353, 380, 584, 1072, 1510, 1590
Bst6I CTCTTC 2 cut(s) 611, 1146
BstACI GRCGYC 1 cut(s) 861
BstAPI GCANNNNNTGC 1 cut(s) 1217
BstC8I GCNNGC 3 cut(s) 423, 1160, 1222
BstDEI CTNAG 4 cut(s) 87, 297, 830, 1028
BstDSI CCRYGG 1 cut(s) 1088
BstF5I GGATG 6 cut(s) 125, 259, 916, 1057, 1105, 1422
BstFNI CGCG 1 cut(s) 1090
BstHHI GCGC 1 cut(s) 800
BstKTI GATC 4 cut(s) 345, 408, 1020, 1034
BstMAI GTCTC 4 cut(s) 110, 477, 539, 1255
BstMBI GATC 4 cut(s) 342, 405, 1017, 1031
BstMWI GCNNNNNNNGC 4 cut(s) 83, 157, 947, 1217
BstNI CCWGG 6 cut(s) 614, 685, 718, 1236, 1318, 1425
BstNSI RCATGY 3 cut(s) 325, 1316, 1438
BstSCI CCNGG 7 cut(s) 612, 683, 716, 1234, 1316, 1423, 1563
BstSFI CTRYAG 1 cut(s) 1449
BstSLI GKGCMC 2 cut(s) 162, 446
BstUI CGCG 1 cut(s) 1090
BstV1I GCAGC 3 cut(s) 64, 1174, 1407
BstV2I GAAGAC 1 cut(s) 324
BstX2I RGATCY 2 cut(s) 342, 1017
BstYI RGATCY 2 cut(s) 342, 1017
BsuRI GGCC 6 cut(s) 201, 234, 563, 683, 941, 1322
BtgI CCRYGG 1 cut(s) 1088
BtrI CACGTC 2 cut(s) 471, 895
BtsCI GGATG 6 cut(s) 125, 259, 916, 1057, 1105, 1422
BtsIMutI CAGTG 1 cut(s) 169
Cac8I GCNNGC 3 cut(s) 423, 1160, 1222
CaiI CAGNNNCTG 2 cut(s) 1076, 1217
CciI TCATGA 2 cut(s) 756, 844
CfoI GCGC 1 cut(s) 800
Cfr13I GGNCC 6 cut(s) 137, 199, 376, 562, 1320, 1427
Cfr42I CCGCGG 1 cut(s) 1091
CseI GACGC 2 cut(s) 467, 510
Csp6I GTAC 2 cut(s) 349, 371
CspCI CAANNNNNGTGG 4 cut(s) 274, 309, 939, 974
CviQI GTAC 2 cut(s) 349, 371
DdeI CTNAG 4 cut(s) 87, 297, 830, 1028
DpnI GATC 4 cut(s) 344, 407, 1019, 1033
DpnII GATC 4 cut(s) 342, 405, 1017, 1031
EaeI YGGCCR 2 cut(s) 232, 939
Eam1104I CTCTTC 2 cut(s) 611, 1146
EarI CTCTTC 2 cut(s) 611, 1146
Ecl136II GAGCTC 1 cut(s) 874
Eco130I CCWWGG 1 cut(s) 1293
Eco24I GRGCYC 2 cut(s) 876, 1398
Eco31I GGTCTC 2 cut(s) 110, 1255
Eco47I GGWCC 3 cut(s) 137, 376, 1427
Eco53kI GAGCTC 1 cut(s) 874
Eco57I CTGAAG 1 cut(s) 380
EcoICRI GAGCTC 1 cut(s) 874
EcoO109I RGGNCCY 1 cut(s) 1427
EcoRII CCWGG 6 cut(s) 612, 683, 716, 1234, 1316, 1423
EcoT14I CCWWGG 1 cut(s) 1293
EcoT38I GRGCYC 2 cut(s) 876, 1398
ErhI CCWWGG 1 cut(s) 1293
Esp3I CGTCTC 1 cut(s) 477
FaqI GGGAC 7 cut(s) 20, 292, 389, 513, 593, 704, 1058
FauI CCCGC 2 cut(s) 768, 1352
FauNDI CATATG 1 cut(s) 730
Fnu4HI GCNGC 5 cut(s) 78, 1091, 1163, 1242, 1421
FokI GGATG 6 cut(s) 132, 266, 923, 1064, 1112, 1429
FriOI GRGCYC 2 cut(s) 876, 1398
Fsp4HI GCNGC 5 cut(s) 78, 1091, 1163, 1242, 1421
FspBI CTAG 4 cut(s) 428, 548, 789, 947
GlaI GCGC 1 cut(s) 799
GluI GCNGC 5 cut(s) 78, 1091, 1163, 1242, 1421
GsuI CTGGAG 3 cut(s) 166, 596, 1166
HaeIII GGCC 6 cut(s) 201, 234, 563, 683, 941, 1322
HapII CCGG 1 cut(s) 1564
HgaI GACGC 2 cut(s) 467, 510
HhaI GCGC 1 cut(s) 800
Hin1I GRCGYC 1 cut(s) 861
Hin6I GCGC 1 cut(s) 798
HinP1I GCGC 1 cut(s) 798
HincII GTYRAC 2 cut(s) 169, 466
HindII GTYRAC 2 cut(s) 169, 466
HinfI GANTC 9 cut(s) 57, 478, 551, 745, 822, 925, 1118, 1289, 1568
HpaII CCGG 1 cut(s) 1564
HphI GGTGA 7 cut(s) 25, 37, 790, 824, 902, 1024, 1333
Hpy166II GTNNAC 6 cut(s) 39, 160, 169, 466, 1066, 1329
Hpy188I TCNGA 6 cut(s) 265, 360, 477, 827, 978, 1573
Hpy188III TCNNGA 8 cut(s) 54, 145, 403, 491, 628, 757, 845, 1145
Hpy8I GTNNAC 6 cut(s) 39, 160, 169, 466, 1066, 1329
Hpy99I CGWCG 2 cut(s) 395, 863
HpyAV CCTTC 8 cut(s) 329, 333, 355, 497, 625, 1165, 1515, 1568
HpyCH4III ACNGT 8 cut(s) 49, 164, 353, 380, 584, 1072, 1510, 1590
HpyCH4IV ACGT 5 cut(s) 291, 470, 861, 894, 1062
HpyF10VI GCNNNNNNNGC 4 cut(s) 83, 157, 947, 1217
HpyF3I CTNAG 4 cut(s) 87, 297, 830, 1028
HpySE526I ACGT 5 cut(s) 291, 470, 861, 894, 1062
Hsp92I GRCGYC 1 cut(s) 861
HspAI GCGC 1 cut(s) 798
KspI CCGCGG 1 cut(s) 1091
Kzo9I GATC 4 cut(s) 342, 405, 1017, 1031
LguI GCTCTTC 1 cut(s) 611
LmnI GCTCC 2 cut(s) 871, 1388
Lsp1109I GCAGC 3 cut(s) 64, 1174, 1407
LweI GCATC 4 cut(s) 110, 901, 1407, 1431
MaeI CTAG 4 cut(s) 428, 548, 789, 947
MaeII ACGT 5 cut(s) 291, 470, 861, 894, 1062
MaeIII GTNAC 7 cut(s) 13, 214, 326, 556, 890, 1339, 1504
MalI GATC 4 cut(s) 344, 407, 1019, 1033
MboI GATC 4 cut(s) 342, 405, 1017, 1031
MboII GAAGA 7 cut(s) 329, 526, 598, 847, 1027, 1163, 1510
MfeI CAATTG 1 cut(s) 750
MflI RGATCY 2 cut(s) 342, 1017
MhlI GDGCHC 5 cut(s) 162, 446, 606, 876, 1398
MluCI AATT 3 cut(s) 19, 750, 1477
MlyI GAGTC 4 cut(s) 51, 545, 754, 816
MmeI TCCRAC 4 cut(s) 115, 849, 1045, 1394
MseI TTAA 1 cut(s) 741
MslI CAYNNNNRTG 2 cut(s) 1439, 1487
MspA1I CMGCKG 1 cut(s) 1090
MspI CCGG 1 cut(s) 1564
MspR9I CCNGG 7 cut(s) 614, 685, 718, 1236, 1318, 1425, 1565
MunI CAATTG 1 cut(s) 750
MvaI CCWGG 6 cut(s) 614, 685, 718, 1236, 1318, 1425
MvnI CGCG 1 cut(s) 1090
MwoI GCNNNNNNNGC 4 cut(s) 83, 157, 947, 1217
NciI CCSGG 1 cut(s) 1565
NdeI CATATG 1 cut(s) 730
NdeII GATC 4 cut(s) 342, 405, 1017, 1031
NlaIV GGNNCC 3 cut(s) 344, 377, 1240
NmeAIII GCCGAG 1 cut(s) 620
NmuCI GTSAC 5 cut(s) 13, 326, 556, 890, 1339
NspI RCATGY 3 cut(s) 325, 1316, 1438
PagI TCATGA 2 cut(s) 756, 844
PciI ACATGT 1 cut(s) 321
PciSI GCTCTTC 1 cut(s) 611
PfeI GAWTC 5 cut(s) 478, 925, 1118, 1289, 1568
PflMI CCANNNNNTGG 1 cut(s) 1413
PkrI GCNGC 5 cut(s) 79, 1092, 1164, 1243, 1422
PleI GAGTC 4 cut(s) 51, 545, 753, 816
PpsI GAGTC 4 cut(s) 51, 545, 753, 816
PpuMI RGGWCCY 1 cut(s) 1427
PscI ACATGT 1 cut(s) 321
Psp124BI GAGCTC 1 cut(s) 876
Psp1406I AACGTT 1 cut(s) 1062
Psp5II RGGWCCY 1 cut(s) 1427
Psp6I CCWGG 6 cut(s) 612, 683, 716, 1234, 1316, 1423
PspGI CCWGG 6 cut(s) 612, 683, 716, 1234, 1316, 1423
PspN4I GGNNCC 3 cut(s) 344, 377, 1240
PspPI GGNCC 6 cut(s) 137, 199, 376, 562, 1320, 1427
PspPPI RGGWCCY 1 cut(s) 1427
PstNI CAGNNNCTG 2 cut(s) 1076, 1217
PsuI RGATCY 2 cut(s) 342, 1017
RsaI GTAC 2 cut(s) 350, 372
RsaNI GTAC 2 cut(s) 349, 371
RseI CAYNNNNRTG 2 cut(s) 1439, 1487
SacI GAGCTC 1 cut(s) 876
SacII CCGCGG 1 cut(s) 1091
SapI GCTCTTC 1 cut(s) 611
SaqAI TTAA 1 cut(s) 741
SatI GCNGC 5 cut(s) 78, 1091, 1163, 1242, 1421
Sau3AI GATC 4 cut(s) 342, 405, 1017, 1031
Sau96I GGNCC 6 cut(s) 137, 199, 376, 562, 1320, 1427
ScaI AGTACT 1 cut(s) 350
SchI GAGTC 4 cut(s) 51, 545, 754, 816
ScrFI CCNGG 7 cut(s) 614, 685, 718, 1236, 1318, 1425, 1565
SduI GDGCHC 5 cut(s) 162, 446, 606, 876, 1398
SfaNI GCATC 4 cut(s) 110, 901, 1407, 1431
SfcI CTRYAG 1 cut(s) 1449
Sfr303I CCGCGG 1 cut(s) 1091
SgrBI CCGCGG 1 cut(s) 1091
SinI GGWCC 3 cut(s) 137, 376, 1427
SmiMI CAYNNNNRTG 2 cut(s) 1439, 1487
SmlI CTYRAG 1 cut(s) 1225
SmoI CTYRAG 1 cut(s) 1225
Sse9I AATT 3 cut(s) 19, 750, 1477
SsiI CCGC 8 cut(s) 181, 775, 984, 1088, 1090, 1242, 1275, 1345
SspMI CTAG 4 cut(s) 428, 548, 789, 947
SstI GAGCTC 1 cut(s) 876
StyD4I CCNGG 7 cut(s) 612, 683, 716, 1234, 1316, 1423, 1563
StyI CCWWGG 1 cut(s) 1293
TaaI ACNGT 8 cut(s) 49, 164, 353, 380, 584, 1072, 1510, 1590
TaiI ACGT 5 cut(s) 294, 473, 864, 897, 1065
TaqI TCGA 4 cut(s) 191, 627, 858, 1539
TasI AATT 3 cut(s) 19, 750, 1477
TatI WGTACW 1 cut(s) 348
TauI GCSGC 2 cut(s) 1093, 1244
TfiI GAWTC 5 cut(s) 478, 925, 1118, 1289, 1568
Tru1I TTAA 1 cut(s) 741
Tru9I TTAA 1 cut(s) 741
TscAI CASTG 1 cut(s) 169
TseFI GTSAC 5 cut(s) 13, 326, 556, 890, 1339
TseI GCWGC 3 cut(s) 77, 1162, 1420
Tsp45I GTSAC 5 cut(s) 13, 326, 556, 890, 1339
TspDTI ATGAA 4 cut(s) 641, 833, 1184, 1477
TspGWI ACGGA 1 cut(s) 52
TspRI CASTG 1 cut(s) 169
Van91I CCANNNNNTGG 1 cut(s) 1413
VneI GTGCAC 1 cut(s) 158
VpaK11BI GGWCC 3 cut(s) 137, 376, 1427
XapI RAATTY 1 cut(s) 19
XceI RCATGY 3 cut(s) 325, 1316, 1438
XcmI CCANNNNNNNNNTGG 3 cut(s) 88, 572, 681
XspI CTAG 4 cut(s) 428, 548, 789, 947
ZraI GACGTC 1 cut(s) 862
ZrmI AGTACT 1 cut(s) 350
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.