FvH4_1g21471

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0000182
Physical Location & Seq
Reverse (-)
13434400 .. 13436006
1607 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g21471.t1

Sequence Viewer

Length: 1470 bp
ATGCTACTAGTGACTTTACCCAGGTTGGACAACAAGTCAAAAGCCTCAGCAATCTTCTTCAACCCCAATCCTCGCCCCCAACAAAATGAACCCCCTTTTGTTACATCAGTTGGTGGTGTGAGAGTGGTTGTTGAGAGAGACCAAACCCATATCTTTACTCCAAGAAAAACCATGTCCCTGAAACAACACCTGCTGAAATATTGTTTGGTGGCCAAAATCTTTGGCAAAAGAGTATCCCCTAAGTGCATCGTTCGTAGGTGTAACCATCTCTGGGTTGCTCTCCAAGGCACTGTCAAGATGGTGCAAATGGCAAATGGGTGGTTTGCTCTAGAGTTTGTGCACACCCAAGATGCTGATTATGTGCTGGAGAACAAACCTTGGTTTGTCCGAGGTAGAATCTTCCATATTCGGCGATGGGCCCCATCTTTTGATCCCAAGGAGGCCAAGATTGAAACCCTCACACTCTGGGTGCGTTTACCAAACCTCCCATTACACTTTTGGCATGAAGACGCTATTCTACCTGTGGTTAACGTCGTGGGACGCTTTATCAAGCTGGATGAAAAGACCAAAAACACTGAGAACTACATGTTTGCCAGAGCATGCATGGAGATAGATCTTCGTACTCCACTCAAGCGTGTTCTTGTAGTGCATGAAGAAGACGAAGGGGATCTGGAATTTAACATGGTAAGCAAGCCTGTCAAGCTTTATGTTTCATATGAAGGTATTTTTGAGGTCTGTTTCAAGTGTGGCAGTCATAAGCATAAGTTCTGGGAATGCCCCAACAAGAAGAAAGATGATCACTTTGTTTTGGTGGATCGTGCTGAGAGTGACAATGATGTGGAGCCTGAGGAACTAGAGGTTGACCCGGAAATCAAAAGCCTTGCCAACAAAGAAATTATGCTCTATTTTCTGTTACCTATCAAAACTGACAACCACATGCCTGAGGAAGCAGCTAAGGAGGACCTAAACCCGCCCTCTCCAGCTTGGACCACAGTGCAAAGGAAGAACAAAACTACGTCCAAAGCCCAGGCTTCTAGTGGAATCCAAGGAGGAAACGTCTCCAATGGAGATGTCAAGGCTCCTAAAAAGAAGAAAGCAAATATGGTGCAACCGGGTATCTCTTTTAAGGATATGGCTGCAAGCACAGGTGCTTTTGCGGTATCTGATGAGGATGTCCGGAAGGCCCTGCACTTGATCAACTCTAGAAGTCCCTCAAGTAATCAGGAGGAGGTGTCTGAGAATTTTGTGGCTGCAAAGTCTCATGGTAATGAGGGGAAGGATATGGTAATGACTAATGCTGGCATCCAAAGCAGCAAAGGTAATAACCTTGCTATGAGTGGGAGTTCTGAGATGAGCACAGGCACCGAATCAAAGAAGAGAGCTAGGGTTCTGGAAGATGACAACATGCTGTATGAATCTGCTGAGGAGGAAGGCAGTATCTCGTCTGCTGCAAAATTAGCCAAGAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 RVT_1 RVT_3 zf-RVT

Protein Analysis

490

Amino Acids

55.18

Weight (kDa)

8.6

Isoelectric Point (pI)

50.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4283 PF14111 64 - 147 4.6e-13 Domain of unknown function (DUF4283)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000182)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21471 FvH4_1g27953 FvH4_1g28801 FvH4_2g14522 FvH4_3g04280 FvH4_3g28251 FvH4_4g07491 FvH4_4g30262
malus_domestica MD10G1046400.v1.1 MD10G1126900.v1.1 MD11G1236100.v1.1
prunus_persica Prupe.1G148300_v2.0.a1 Prupe.2G036800_v2.0.a1 Prupe.8G054600_v2.0.a1 Prupe.8G054700_v2.0.a1
pyrus_communis pycom05g05520 pycom08g11160 pycom13g29480
rosa_chinensis RchiOBHm_Chr7g0182921 RchiOBHm_Chr7g0230111
rosa_laevigata RLG00000000536 RLG00000001385 RLG00000001492 RLG00000002640 RLG00000003082 RLG00000005042 RLG00000007254 RLG00000007773 RLG00000008594 RLG00000009508 RLG00000010355 RLG00000013369 RLG00000014370 RLG00000014371 RLG00000018745 RLG00000020268 RLG00000020832 RLG00000022569 RLG00000028073 RLG00000028388 RLG00000028677 RLG00000035645
rosa_multiflora Rmu_co8277499.1_g000001 Rmu_co8500999.1_g000001 Rmu_sc0000014.1_g000025 Rmu_sc0000103.1_g000003 Rmu_sc0000168.1_g000019 Rmu_sc0000283.1_g000006 Rmu_sc0000693.1_g000080 Rmu_sc0000997.1_g000005 Rmu_sc0001228.1_g000005 Rmu_sc0001231.1_g000023 Rmu_sc0002833.1_g000037 Rmu_sc0002869.1_g000015 Rmu_sc0003545.1_g000003 Rmu_sc0003693.1_g000028 Rmu_sc0004000.1_g000022 Rmu_sc0004454.1_g000007 Rmu_sc0004976.1_g000036 Rmu_sc0005014.1_g000013 Rmu_sc0005046.1_g000013 Rmu_sc0005063.1_g000009 Rmu_sc0005652.1_g000002 Rmu_sc0005697.1_g000008 Rmu_sc0006989.1_g000014 Rmu_sc0008957.1_g000003 Rmu_sc0011659.1_g000001 Rmu_sc0027477.1_g000001 Rmu_ssc0000387.1_g000021
rosa_roxburghii Rroxscaffold_1G00020860 Rroxscaffold_1G00035780 Rroxscaffold_1G00051370 Rroxscaffold_2G00101730 Rroxscaffold_3G00230130 Rroxscaffold_4G00280070 Rroxscaffold_4G00281160 Rroxscaffold_4G00318780 Rroxscaffold_5G00341570 Rroxscaffold_5G00341580 Rroxscaffold_7G00191230 Rroxscaffold_7G00195880 Rroxscaffold_7G00195890 Rroxscaffold_7G00209080 Rroxscaffold_7G00209090
rosa_rugosa Rorug02G0170400 Rorug03G0234500 Rorug04G0045200 Rorug07G0191000
rosa_samantha Rh1AG012200 Rh1AG012300 Rh1AG021700 Rh1AG033800 Rh1AG033900 Rh1AG048100 Rh1AG087000 Rh1AG168600 Rh1CG004600 Rh2BG192700 Rh2BG200800 Rh2BG310200 Rh2BG356900 Rh2BG377900 Rh2BG378000 Rh2CG356300 Rh2DG394800 Rh3AG199000 Rh3AG258700 Rh3AG258800 Rh3AG324400 Rh3BG202300 Rh3BG202400 Rh3BG228800 Rh3BG318800 Rh3BG360400 Rh3BG368300 Rh3BG373700 Rh4AG071400 Rh4AG153700 Rh4AG224300 Rh4AG224400 Rh4CG044000 Rh4CG077200 Rh4CG077300 Rh4CG238700 Rh4CG238800 Rh4CG238900 Rh5BG367100 Rh5BG379500 Rh5BG379600 Rh5BG396700 Rh5BG412900 Rh5DG427200 Rh6AG015200 Rh6AG015300 Rh6AG122800 Rh6AG175600 Rh6AG187700 Rh6AG187800 Rh6AG260800 Rh6AG355000 Rh6BG074900 Rh6BG102300 Rh7AG127400 Rh7AG157500 Rh7AG157600 Rh7AG212200 Rh7AG331400 Rh7AG412000 Rh7CG055400 Rh7CG131400 Rh7CG131500 Rh7CG224300 Rh7CG267100 Rh7CG348800
rosa_wichuraiana Rw0G009820 Rw1G000520 Rw1G008820 Rw4G014110 Rw4G019370 Rw4G022440 Rw6G010550 Rw7G001520 Rw7G018400 Rw7G025210 Rw7G027910

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 198
Acc36I ACCTGC 1 cut(s) 198
AccB1I GGYRCC 1 cut(s) 1361
AccIII TCCGGA 1 cut(s) 1176
AciI CCGC 2 cut(s) 971, 1157
AclWI GGATC 3 cut(s) 425, 675, 822
AcoI YGGCCR 1 cut(s) 210
AcsI RAATTY 2 cut(s) 674, 1240
AfaI GTAC 1 cut(s) 622
AfiI CCNNNNNNNGG 1 cut(s) 271
AflIII ACRYGT 1 cut(s) 585
AgsI TTSAA 3 cut(s) 61, 452, 742
AhdI GACNNNNNGTC 1 cut(s) 34
AhlI ACTAGT 1 cut(s) 7
AjnI CCWGG 2 cut(s) 20, 1026
AjuI GAANNNNNNNTTGG 2 cut(s) 188, 220
AluBI AGCT 5 cut(s) 553, 703, 953, 983, 1382
AluI AGCT 5 cut(s) 553, 703, 953, 983, 1382
Alw21I GWGCWC 2 cut(s) 342, 1358
Alw26I GTCTC 3 cut(s) 132, 1063, 1263
Alw44I GTGCAC 1 cut(s) 338
AlwI GGATC 3 cut(s) 425, 675, 822
Aor13HI TCCGGA 1 cut(s) 1176
AoxI GGCC 4 cut(s) 210, 417, 441, 1182
ApaI GGGCCC 1 cut(s) 421
ApaLI GTGCAC 1 cut(s) 338
ApeKI GCWGC 5 cut(s) 950, 1136, 1250, 1311, 1448
ApoI RAATTY 2 cut(s) 674, 1240
AspS9I GGNCC 5 cut(s) 417, 418, 961, 987, 1183
AsuC2I CCSGG 2 cut(s) 866, 1113
AvaII GGWCC 2 cut(s) 961, 987
AxyI CCTNAGG 2 cut(s) 846, 942
BaeGI GKGCMC 2 cut(s) 342, 421
BalI TGGCCA 1 cut(s) 212
BanI GGYRCC 1 cut(s) 1361
BanII GRGCYC 1 cut(s) 421
BbsI GAAGAC 2 cut(s) 513, 663
Bbv12I GWGCWC 2 cut(s) 342, 1358
BbvCI CCTCAGC 2 cut(s) 46, 1422
BbvI GCAGC 5 cut(s) 962, 1123, 1237, 1323, 1435
BccI CCATC 4 cut(s) 273, 292, 408, 430
BciT130I CCWGG 2 cut(s) 22, 1028
BciVI GTATCC 1 cut(s) 244
BclI TGATCA 2 cut(s) 796, 1194
BcnI CCSGG 2 cut(s) 866, 1113
BcoDI GTCTC 3 cut(s) 132, 1063, 1263
BcuI ACTAGT 1 cut(s) 7
BfaI CTAG 6 cut(s) 8, 329, 854, 1035, 1203, 1383
BfuAI ACCTGC 1 cut(s) 198
BfuI GTATCC 1 cut(s) 244
BglII AGATCT 1 cut(s) 613
BisI GCNGC 5 cut(s) 951, 1137, 1251, 1312, 1449
BlsI GCNGC 5 cut(s) 952, 1138, 1252, 1313, 1450
Bme1390I CCNGG 4 cut(s) 22, 866, 1028, 1113
Bme18I GGWCC 2 cut(s) 961, 987
BmeRI GACNNNNNGTC 1 cut(s) 34
BmgT120I GGNCC 5 cut(s) 417, 418, 961, 987, 1183
BmiI GGNNCC 5 cut(s) 419, 420, 843, 1080, 1363
BmrFI CCNGG 4 cut(s) 22, 866, 1028, 1113
BmsI GCATC 3 cut(s) 255, 340, 1311
BpiI GAAGAC 2 cut(s) 513, 663
BpmI CTGGAG 2 cut(s) 386, 963
Bpu10I CCTNAGC 3 cut(s) 46, 954, 1422
BpuEI CTTGAG 2 cut(s) 614, 1198
BpuMI CCSGG 2 cut(s) 866, 1113
BsaI GGTCTC 1 cut(s) 132
BsaJI CCNNGG 7 cut(s) 20, 283, 377, 388, 435, 1026, 1045
BsaWI WCCGGW 1 cut(s) 1176
BsaXI ACNNNNNCTCC 6 cut(s) 468, 498, 1041, 1071, 1217, 1247
Bsc4I CCNNNNNNNGG 1 cut(s) 271
Bse21I CCTNAGG 2 cut(s) 846, 942
BseAI TCCGGA 1 cut(s) 1176
BseBI CCWGG 2 cut(s) 22, 1028
BseDI CCNNGG 7 cut(s) 20, 283, 377, 388, 435, 1026, 1045
BseGI GGATG 3 cut(s) 562, 1177, 1302
BseLI CCNNNNNNNGG 1 cut(s) 271
BseMII CTCAG 8 cut(s) 60, 567, 813, 837, 933, 1227, 1338, 1413
BseRI GAGGAG 2 cut(s) 1241, 1439
BseSI GKGCMC 2 cut(s) 342, 421
BseXI GCAGC 5 cut(s) 962, 1123, 1237, 1323, 1435
BsgI GTGCAG 1 cut(s) 1172
BshFI GGCC 4 cut(s) 212, 419, 443, 1184
BshNI GGYRCC 1 cut(s) 1361
BsiHKAI GWGCWC 2 cut(s) 342, 1358
BsiSI CCGG 3 cut(s) 866, 1112, 1177
BslFI GGGAC 3 cut(s) 160, 552, 1194
BslI CCNNNNNNNGG 1 cut(s) 271
BsmAI GTCTC 3 cut(s) 132, 1063, 1263
BsmBI CGTCTC 1 cut(s) 1063
BsmFI GGGAC 3 cut(s) 160, 552, 1194
BsmI GAATGC 1 cut(s) 779
BsnI GGCC 4 cut(s) 212, 419, 443, 1184
Bso31I GGTCTC 1 cut(s) 132
Bsp120I GGGCCC 1 cut(s) 417
Bsp1286I GDGCHC 3 cut(s) 342, 421, 1358
Bsp13I TCCGGA 1 cut(s) 1176
Bsp143I GATC 6 cut(s) 430, 613, 667, 796, 814, 1194
BspACI CCGC 2 cut(s) 971, 1157
BspANI GGCC 4 cut(s) 212, 419, 443, 1184
BspCNI CTCAG 8 cut(s) 59, 568, 814, 838, 934, 1228, 1339, 1414
BspEI TCCGGA 1 cut(s) 1176
BspLI GGNNCC 5 cut(s) 419, 420, 843, 1080, 1363
BspMI ACCTGC 1 cut(s) 198
BspPI GGATC 3 cut(s) 425, 675, 822
BspT107I GGYRCC 1 cut(s) 1361
BspTNI GGTCTC 1 cut(s) 132
BssECI CCNNGG 7 cut(s) 20, 283, 377, 388, 435, 1026, 1045
BssMI GATC 6 cut(s) 430, 613, 667, 796, 814, 1194
BssT1I CCWWGG 4 cut(s) 283, 377, 435, 1045
Bst2UI CCWGG 2 cut(s) 22, 1028
Bst4CI ACNGT 2 cut(s) 292, 994
Bst6I CTCTTC 1 cut(s) 1370
BstC8I GCNNGC 4 cut(s) 601, 692, 1141, 1300
BstF5I GGATG 3 cut(s) 562, 1177, 1302
BstKTI GATC 6 cut(s) 433, 616, 670, 799, 817, 1197
BstMAI GTCTC 3 cut(s) 132, 1063, 1263
BstMBI GATC 6 cut(s) 430, 613, 667, 796, 814, 1194
BstMWI GCNNNNNNNGC 3 cut(s) 700, 1308, 1457
BstNI CCWGG 2 cut(s) 22, 1028
BstNSI RCATGY 4 cut(s) 589, 603, 940, 1408
BstSCI CCNGG 4 cut(s) 20, 864, 1026, 1111
BstSLI GKGCMC 2 cut(s) 342, 421
BstV1I GCAGC 5 cut(s) 962, 1123, 1237, 1323, 1435
BstV2I GAAGAC 2 cut(s) 513, 663
BstX2I RGATCY 2 cut(s) 613, 667
BstYI RGATCY 2 cut(s) 613, 667
Bsu36I CCTNAGG 2 cut(s) 846, 942
BsuI GTATCC 1 cut(s) 244
BsuRI GGCC 4 cut(s) 212, 419, 443, 1184
BtgZI GCGATG 1 cut(s) 427
BtsCI GGATG 3 cut(s) 562, 1177, 1302
BtsIMutI CAGTG 3 cut(s) 288, 573, 999
BveI ACCTGC 1 cut(s) 198
Cac8I GCNNGC 4 cut(s) 601, 692, 1141, 1300
Cfr13I GGNCC 5 cut(s) 417, 418, 961, 987, 1183
CseI GACGC 2 cut(s) 518, 549
Csp6I GTAC 1 cut(s) 621
CviQI GTAC 1 cut(s) 621
DpnI GATC 6 cut(s) 432, 615, 669, 798, 816, 1196
DpnII GATC 6 cut(s) 430, 613, 667, 796, 814, 1194
DriI GACNNNNNGTC 1 cut(s) 34
EaeI YGGCCR 1 cut(s) 210
Eam1104I CTCTTC 1 cut(s) 1370
Eam1105I GACNNNNNGTC 1 cut(s) 34
EarI CTCTTC 1 cut(s) 1370
Eco130I CCWWGG 4 cut(s) 283, 377, 435, 1045
Eco24I GRGCYC 1 cut(s) 421
Eco31I GGTCTC 1 cut(s) 132
Eco47I GGWCC 2 cut(s) 961, 987
Eco81I CCTNAGG 2 cut(s) 846, 942
EcoO109I RGGNCCY 3 cut(s) 418, 961, 1183
EcoRII CCWGG 2 cut(s) 20, 1026
EcoT14I CCWWGG 4 cut(s) 283, 377, 435, 1045
EcoT22I ATGCAT 1 cut(s) 605
EcoT38I GRGCYC 1 cut(s) 421
ErhI CCWWGG 4 cut(s) 283, 377, 435, 1045
Esp3I CGTCTC 1 cut(s) 1063
FaqI GGGAC 3 cut(s) 160, 552, 1194
FauI CCCGC 1 cut(s) 978
FauNDI CATATG 1 cut(s) 715
FbaI TGATCA 2 cut(s) 796, 1194
Fnu4HI GCNGC 5 cut(s) 951, 1137, 1251, 1312, 1449
FokI GGATG 3 cut(s) 569, 1184, 1289
FriOI GRGCYC 1 cut(s) 421
Fsp4HI GCNGC 5 cut(s) 951, 1137, 1251, 1312, 1449
FspBI CTAG 6 cut(s) 8, 329, 854, 1035, 1203, 1383
GluI GCNGC 5 cut(s) 951, 1137, 1251, 1312, 1449
GsuI CTGGAG 2 cut(s) 386, 963
HaeIII GGCC 4 cut(s) 212, 419, 443, 1184
HapII CCGG 3 cut(s) 866, 1112, 1177
HgaI GACGC 2 cut(s) 518, 549
HincII GTYRAC 2 cut(s) 529, 862
HindII GTYRAC 2 cut(s) 529, 862
HindIII AAGCTT 1 cut(s) 701
HinfI GANTC 4 cut(s) 396, 1041, 1367, 1415
HpaI GTTAAC 1 cut(s) 529
HpaII CCGG 3 cut(s) 866, 1112, 1177
Hpy166II GTNNAC 4 cut(s) 340, 476, 529, 862
Hpy188I TCNGA 4 cut(s) 389, 1165, 1237, 1348
Hpy188III TCNNGA 7 cut(s) 295, 329, 671, 1177, 1203, 1223, 1391
Hpy8I GTNNAC 4 cut(s) 340, 476, 529, 862
Hpy99I CGWCG 1 cut(s) 536
HpyAV CCTTC 5 cut(s) 656, 713, 1174, 1270, 1424
HpyCH4III ACNGT 2 cut(s) 292, 994
HpyCH4IV ACGT 3 cut(s) 531, 1016, 1056
HpyF10VI GCNNNNNNNGC 3 cut(s) 700, 1308, 1457
HpySE526I ACGT 3 cut(s) 531, 1016, 1056
Kpn2I TCCGGA 1 cut(s) 1176
Ksp22I TGATCA 2 cut(s) 796, 1194
KspAI GTTAAC 1 cut(s) 529
Kzo9I GATC 6 cut(s) 430, 613, 667, 796, 814, 1194
LmnI GCTCC 2 cut(s) 841, 1084
Lsp1109I GCAGC 5 cut(s) 962, 1123, 1237, 1323, 1435
LweI GCATC 3 cut(s) 255, 340, 1311
MaeI CTAG 6 cut(s) 8, 329, 854, 1035, 1203, 1383
MaeII ACGT 3 cut(s) 531, 1016, 1056
MaeIII GTNAC 5 cut(s) 10, 100, 260, 827, 912
MalI GATC 6 cut(s) 432, 615, 669, 798, 816, 1196
MboI GATC 6 cut(s) 430, 613, 667, 796, 814, 1194
MflI RGATCY 2 cut(s) 613, 667
MhlI GDGCHC 3 cut(s) 342, 421, 1358
MlsI TGGCCA 1 cut(s) 212
MluCI AATT 4 cut(s) 674, 894, 1240, 1454
MluNI TGGCCA 1 cut(s) 212
MmeI TCCRAC 1 cut(s) 6
Mox20I TGGCCA 1 cut(s) 212
Mph1103I ATGCAT 1 cut(s) 605
MroI TCCGGA 1 cut(s) 1176
MscI TGGCCA 1 cut(s) 212
MseI TTAA 3 cut(s) 528, 678, 1125
MslI CAYNNNNRTG 1 cut(s) 1266
Msp20I TGGCCA 1 cut(s) 212
MspI CCGG 3 cut(s) 866, 1112, 1177
MspR9I CCNGG 4 cut(s) 22, 866, 1028, 1113
Mva1269I GAATGC 1 cut(s) 779
MvaI CCWGG 2 cut(s) 22, 1028
MwoI GCNNNNNNNGC 3 cut(s) 700, 1308, 1457
NciI CCSGG 2 cut(s) 866, 1113
NdeI CATATG 1 cut(s) 715
NdeII GATC 6 cut(s) 430, 613, 667, 796, 814, 1194
NlaIV GGNNCC 5 cut(s) 419, 420, 843, 1080, 1363
NmuCI GTSAC 2 cut(s) 10, 827
NsiI ATGCAT 1 cut(s) 605
NspI RCATGY 4 cut(s) 589, 603, 940, 1408
PaeI GCATGC 1 cut(s) 603
PaqCI CACCTGC 1 cut(s) 198
PciI ACATGT 1 cut(s) 585
PctI GAATGC 1 cut(s) 779
PfeI GAWTC 4 cut(s) 396, 1041, 1367, 1415
PkrI GCNGC 5 cut(s) 952, 1138, 1252, 1313, 1450
PpuMI RGGWCCY 1 cut(s) 961
PscI ACATGT 1 cut(s) 585
Psp5II RGGWCCY 1 cut(s) 961
Psp6I CCWGG 2 cut(s) 20, 1026
PspGI CCWGG 2 cut(s) 20, 1026
PspN4I GGNNCC 5 cut(s) 419, 420, 843, 1080, 1363
PspOMI GGGCCC 1 cut(s) 417
PspPI GGNCC 5 cut(s) 417, 418, 961, 987, 1183
PspPPI RGGWCCY 1 cut(s) 961
PsuI RGATCY 2 cut(s) 613, 667
RsaI GTAC 1 cut(s) 622
RsaNI GTAC 1 cut(s) 621
RseI CAYNNNNRTG 1 cut(s) 1266
SaqAI TTAA 3 cut(s) 528, 678, 1125
SatI GCNGC 5 cut(s) 951, 1137, 1251, 1312, 1449
Sau3AI GATC 6 cut(s) 430, 613, 667, 796, 814, 1194
Sau96I GGNCC 5 cut(s) 417, 418, 961, 987, 1183
ScrFI CCNGG 4 cut(s) 22, 866, 1028, 1113
SduI GDGCHC 3 cut(s) 342, 421, 1358
SfaNI GCATC 3 cut(s) 255, 340, 1311
SinI GGWCC 2 cut(s) 961, 987
SmiMI CAYNNNNRTG 1 cut(s) 1266
SmlI CTYRAG 2 cut(s) 629, 1213
SmoI CTYRAG 2 cut(s) 629, 1213
SpeI ACTAGT 1 cut(s) 7
SphI GCATGC 1 cut(s) 603
Sse9I AATT 4 cut(s) 674, 894, 1240, 1454
SsiI CCGC 2 cut(s) 971, 1157
SspI AATATT 1 cut(s) 200
SspMI CTAG 6 cut(s) 8, 329, 854, 1035, 1203, 1383
StyD4I CCNGG 4 cut(s) 20, 864, 1026, 1111
StyI CCWWGG 4 cut(s) 283, 377, 435, 1045
TaaI ACNGT 2 cut(s) 292, 994
TaiI ACGT 3 cut(s) 534, 1019, 1059
TasI AATT 4 cut(s) 674, 894, 1240, 1454
TfiI GAWTC 4 cut(s) 396, 1041, 1367, 1415
Tru1I TTAA 3 cut(s) 528, 678, 1125
Tru9I TTAA 3 cut(s) 528, 678, 1125
TscAI CASTG 3 cut(s) 295, 580, 999
TseFI GTSAC 2 cut(s) 10, 827
TseI GCWGC 5 cut(s) 950, 1136, 1250, 1311, 1448
Tsp45I GTSAC 2 cut(s) 10, 827
TspDTI ATGAA 7 cut(s) 102, 519, 573, 666, 702, 732, 1428
TspRI CASTG 3 cut(s) 295, 580, 999
VneI GTGCAC 1 cut(s) 338
VpaK11BI GGWCC 2 cut(s) 961, 987
XapI RAATTY 2 cut(s) 674, 1240
XbaI TCTAGA 2 cut(s) 328, 1202
XceI RCATGY 4 cut(s) 589, 603, 940, 1408
XcmI CCANNNNNNNNNTGG 3 cut(s) 495, 601, 1034
XspI CTAG 6 cut(s) 8, 329, 854, 1035, 1203, 1383
Zsp2I ATGCAT 1 cut(s) 605
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.