Rh3BG318800

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
OG0000182
Physical Location & Seq
Reverse (-)
32686324 .. 32687672
1349 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3BG318800.1

Sequence Viewer

Length: 1194 bp
ATGGCTAATGGCTGGTACTCGCTTGAATTCACCTATCAGCAGGATCTCGACTTTGTTCTAGAGAATCGACCGTGGTTTGTGAAGGGCAGGATTTTCCATATCCGGCGATGGTCTCCTTCTTTTAACCCGAGGGATGCGGATATTGAAACTCTTATTCTATCGGCCATTCAACCGATCGTGCAAGTGATTGGTCGGTTTATCAAGCTTGATGAACGCACGAAGAATAGCGAGAACTACATCTTCGCTAGAGCTTGCATGGAGATCGACTTGCGCACTCCGCTGAAGGGTACCTTGGTAATCAGGGAAGAAGATGAGGGTGACCTCCCATTTGACATGGTCAGTGAGCCAGCTACAATCTTTCTATCCTATGAGGCTATCTTTGAGGTCTGCTTCCAGTGTGGTAGCTATAAGCACAAGATCAAAGACTCTCCTGCAAAGAGGAAGGAAAAGCACTTTGTTATGGTGGATAAGGAAGAAGGGGATGAAGACATGGTCCCTGCTGACATAGACGTTGATCAGGAGATTAAAGATTTAGCTTCGGAAAAAATCATGCTTTATTTTCTCCAGCCTAATAGGGAAGCCGAAGTTGAGGAGGCTGAAATCAACAACATGGACCTTAACCCACCCTCGCCAGGTTGGAAGTTGGAGGCTTTTGTGAAACCGGGAATTAGCCTCAAGGATGCAACAAAAGGACAAGGCACCATCTTTATCTCTGATGATGGCCAAGACCAGCACAATGGTTCAAAGAAGGGATCCTCCTCTAGTGAGGAGGAAGTGGTTAGCAATTCTAGCTTCGAAAGCTCTGTTTTATCCTATTCTTCTTTTCCTGAGATTGTTAGGCTTTGCAATGATGTGCATGATCGAATTGTTAGGGCTGATGAAATCTATTCCTCGACTCATGCTTTGGATTATTTTTATGCTAACCATAACTCCCCAACTATGCAGTTTGAAAATTTTAGCGATGCTAGGGCCTCGGGTTTTGTTGGGGATGATCAGGACCAGGATATGAATGAGTATGAGATTAAGATGATAAATGGAAGGAGGGCTTTGATGGCTGTTCAGGAGAGCTCTGGTAGGAGCTCGGGATCTAAGAAGAGGACCAGGGAAATGGCTCAAGATGACAACATGACTGAAGCTGCTACAGGAAATGCTGAGGAGGACAGCGCCTCATCTCACAAGGCACCAAAACCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 RVT_1 RVT_3 zf-RVT

Protein Analysis

397

Amino Acids

45.05

Weight (kDa)

4.72

Isoelectric Point (pI)

53.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4283 PF14111 1 - 43 1.6e-07 Domain of unknown function (DUF4283)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000182)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21471 FvH4_1g27953 FvH4_1g28801 FvH4_2g14522 FvH4_3g04280 FvH4_3g28251 FvH4_4g07491 FvH4_4g30262
malus_domestica MD10G1046400.v1.1 MD10G1126900.v1.1 MD11G1236100.v1.1
prunus_persica Prupe.1G148300_v2.0.a1 Prupe.2G036800_v2.0.a1 Prupe.8G054600_v2.0.a1 Prupe.8G054700_v2.0.a1
pyrus_communis pycom05g05520 pycom08g11160 pycom13g29480
rosa_chinensis RchiOBHm_Chr7g0182921 RchiOBHm_Chr7g0230111
rosa_laevigata RLG00000000536 RLG00000001385 RLG00000001492 RLG00000002640 RLG00000003082 RLG00000005042 RLG00000007254 RLG00000007773 RLG00000008594 RLG00000009508 RLG00000010355 RLG00000013369 RLG00000014370 RLG00000014371 RLG00000018745 RLG00000020268 RLG00000020832 RLG00000022569 RLG00000028073 RLG00000028388 RLG00000028677 RLG00000035645
rosa_multiflora Rmu_co8277499.1_g000001 Rmu_co8500999.1_g000001 Rmu_sc0000014.1_g000025 Rmu_sc0000103.1_g000003 Rmu_sc0000168.1_g000019 Rmu_sc0000283.1_g000006 Rmu_sc0000693.1_g000080 Rmu_sc0000997.1_g000005 Rmu_sc0001228.1_g000005 Rmu_sc0001231.1_g000023 Rmu_sc0002833.1_g000037 Rmu_sc0002869.1_g000015 Rmu_sc0003545.1_g000003 Rmu_sc0003693.1_g000028 Rmu_sc0004000.1_g000022 Rmu_sc0004454.1_g000007 Rmu_sc0004976.1_g000036 Rmu_sc0005014.1_g000013 Rmu_sc0005046.1_g000013 Rmu_sc0005063.1_g000009 Rmu_sc0005652.1_g000002 Rmu_sc0005697.1_g000008 Rmu_sc0006989.1_g000014 Rmu_sc0008957.1_g000003 Rmu_sc0011659.1_g000001 Rmu_sc0027477.1_g000001 Rmu_ssc0000387.1_g000021
rosa_roxburghii Rroxscaffold_1G00020860 Rroxscaffold_1G00035780 Rroxscaffold_1G00051370 Rroxscaffold_2G00101730 Rroxscaffold_3G00230130 Rroxscaffold_4G00280070 Rroxscaffold_4G00281160 Rroxscaffold_4G00318780 Rroxscaffold_5G00341570 Rroxscaffold_5G00341580 Rroxscaffold_7G00191230 Rroxscaffold_7G00195880 Rroxscaffold_7G00195890 Rroxscaffold_7G00209080 Rroxscaffold_7G00209090
rosa_rugosa Rorug02G0170400 Rorug03G0234500 Rorug04G0045200 Rorug07G0191000
rosa_samantha Rh1AG012200 Rh1AG012300 Rh1AG021700 Rh1AG033800 Rh1AG033900 Rh1AG048100 Rh1AG087000 Rh1AG168600 Rh1CG004600 Rh2BG192700 Rh2BG200800 Rh2BG310200 Rh2BG356900 Rh2BG377900 Rh2BG378000 Rh2CG356300 Rh2DG394800 Rh3AG199000 Rh3AG258700 Rh3AG258800 Rh3AG324400 Rh3BG202300 Rh3BG202400 Rh3BG228800 Rh3BG318800 Rh3BG360400 Rh3BG368300 Rh3BG373700 Rh4AG071400 Rh4AG153700 Rh4AG224300 Rh4AG224400 Rh4CG044000 Rh4CG077200 Rh4CG077300 Rh4CG238700 Rh4CG238800 Rh4CG238900 Rh5BG367100 Rh5BG379500 Rh5BG379600 Rh5BG396700 Rh5BG412900 Rh5DG427200 Rh6AG015200 Rh6AG015300 Rh6AG122800 Rh6AG175600 Rh6AG187700 Rh6AG187800 Rh6AG260800 Rh6AG355000 Rh6BG074900 Rh6BG102300 Rh7AG127400 Rh7AG157500 Rh7AG157600 Rh7AG212200 Rh7AG331400 Rh7AG412000 Rh7CG055400 Rh7CG131400 Rh7CG131500 Rh7CG224300 Rh7CG267100 Rh7CG348800
rosa_wichuraiana Rw0G009820 Rw1G000520 Rw1G008820 Rw4G014110 Rw4G019370 Rw4G022440 Rw6G010550 Rw7G001520 Rw7G018400 Rw7G025210 Rw7G027910

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 272
Acc65I GGTACC 1 cut(s) 287
AccB1I GGYRCC 3 cut(s) 287, 698, 1180
AciI CCGC 2 cut(s) 137, 278
AclWI GGATC 4 cut(s) 51, 747, 760, 1093
AcoI YGGCCR 2 cut(s) 162, 721
AcsI RAATTY 2 cut(s) 26, 952
AcuI CTGAAG 2 cut(s) 302, 1152
AfaI GTAC 2 cut(s) 17, 289
AfiI CCNNNNNNNGG 2 cut(s) 284, 632
AgsI TTSAA 5 cut(s) 26, 146, 170, 744, 950
AjnI CCWGG 3 cut(s) 631, 999, 1100
AjuI GAANNNNNNNTTGG 2 cut(s) 275, 307
Alw21I GWGCWC 2 cut(s) 1070, 1082
Alw26I GTCTC 1 cut(s) 117
AlwI GGATC 4 cut(s) 51, 747, 760, 1093
Ama87I CYCGRG 3 cut(s) 127, 973, 1081
AoxI GGCC 3 cut(s) 162, 721, 969
ApeKI GCWGC 1 cut(s) 1136
ApoI RAATTY 2 cut(s) 26, 952
ArsI GACNNNNNNTTYG 4 cut(s) 311, 343, 886, 918
Asp718I GGTACC 1 cut(s) 287
AspLEI GCGC 2 cut(s) 273, 1166
AspS9I GGNCC 5 cut(s) 493, 613, 969, 997, 1098
AsuC2I CCSGG 1 cut(s) 663
AsuHPI GGTGA 2 cut(s) 22, 329
AsuII TTCGAA 1 cut(s) 795
AvaI CYCGRG 3 cut(s) 127, 973, 1081
AvaII GGWCC 4 cut(s) 493, 613, 997, 1098
BaeI ACNNNNGTAYC 2 cut(s) 279, 312
BalI TGGCCA 1 cut(s) 723
BamHI GGATCC 1 cut(s) 752
BanI GGYRCC 3 cut(s) 287, 698, 1180
BanII GRGCYC 2 cut(s) 1070, 1082
BbsI GAAGAC 1 cut(s) 492
Bbv12I GWGCWC 2 cut(s) 1070, 1082
BbvCI CCTCAGC 1 cut(s) 1152
BbvI GCAGC 1 cut(s) 1123
BccI CCATC 4 cut(s) 102, 710, 713, 1045
BcgI CGANNNNNNTGC 2 cut(s) 244, 278
BciT130I CCWGG 3 cut(s) 633, 1001, 1102
BclI TGATCA 2 cut(s) 514, 991
BcnI CCSGG 1 cut(s) 663
BcoDI GTCTC 1 cut(s) 117
BfaI CTAG 5 cut(s) 59, 246, 762, 789, 966
BfmI CTRYAG 1 cut(s) 1140
BfoI RGCGCY 1 cut(s) 1167
BisI GCNGC 1 cut(s) 1137
BlsI GCNGC 1 cut(s) 1138
Bme1390I CCNGG 4 cut(s) 633, 663, 1001, 1102
Bme18I GGWCC 4 cut(s) 493, 613, 997, 1098
BmeT110I CYCGRG 3 cut(s) 127, 973, 1081
BmgT120I GGNCC 5 cut(s) 493, 613, 969, 997, 1098
BmiI GGNNCC 5 cut(s) 289, 495, 700, 754, 1182
BmrFI CCNGG 4 cut(s) 633, 663, 1001, 1102
BmsI GCATC 3 cut(s) 124, 670, 952
BpiI GAAGAC 1 cut(s) 492
BpmI CTGGAG 1 cut(s) 548
Bpu10I CCTNAGC 1 cut(s) 1152
Bpu14I TTCGAA 1 cut(s) 795
BpuEI CTTGAG 2 cut(s) 659, 1098
BpuMI CCSGG 1 cut(s) 663
BsaI GGTCTC 1 cut(s) 117
BsaJI CCNNGG 5 cut(s) 71, 128, 291, 972, 1101
BsaXI ACNNNNNCTCC 2 cut(s) 914, 944
Bsc4I CCNNNNNNNGG 2 cut(s) 284, 632
Bse1I ACTGG 1 cut(s) 394
Bse3DI GCAATG 1 cut(s) 853
BseBI CCWGG 3 cut(s) 633, 1001, 1102
BseDI CCNNGG 5 cut(s) 71, 128, 291, 972, 1101
BseGI GGATG 4 cut(s) 139, 487, 685, 994
BseLI CCNNNNNNNGG 2 cut(s) 284, 632
BseMI GCAATG 1 cut(s) 853
BseMII CTCAG 2 cut(s) 819, 1143
BseNI ACTGG 1 cut(s) 394
BseRI GAGGAG 4 cut(s) 605, 748, 782, 1169
BseXI GCAGC 1 cut(s) 1123
Bsh1285I CGRYCG 2 cut(s) 71, 177
BshFI GGCC 3 cut(s) 164, 723, 971
BshNI GGYRCC 3 cut(s) 287, 698, 1180
BsiEI CGRYCG 2 cut(s) 71, 177
BsiHKAI GWGCWC 2 cut(s) 1070, 1082
BsiHKCI CYCGRG 3 cut(s) 127, 973, 1081
BsiSI CCGG 2 cut(s) 103, 662
BslFI GGGAC 1 cut(s) 479
BslI CCNNNNNNNGG 2 cut(s) 284, 632
BsmAI GTCTC 1 cut(s) 117
BsmFI GGGAC 1 cut(s) 479
BsnI GGCC 3 cut(s) 164, 723, 971
Bso31I GGTCTC 1 cut(s) 117
BsoBI CYCGRG 3 cut(s) 127, 973, 1081
Bsp119I TTCGAA 1 cut(s) 795
Bsp1286I GDGCHC 2 cut(s) 1070, 1082
Bsp143I GATC 9 cut(s) 43, 174, 261, 417, 514, 752, 859, 991, 1085
BspACI CCGC 2 cut(s) 137, 278
BspANI GGCC 3 cut(s) 164, 723, 971
BspCNI CTCAG 2 cut(s) 820, 1144
BspLI GGNNCC 5 cut(s) 289, 495, 700, 754, 1182
BspPI GGATC 4 cut(s) 51, 747, 760, 1093
BspT104I TTCGAA 1 cut(s) 795
BspT107I GGYRCC 3 cut(s) 287, 698, 1180
BspTNI GGTCTC 1 cut(s) 117
BsrDI GCAATG 1 cut(s) 853
BsrI ACTGG 1 cut(s) 394
BssECI CCNNGG 5 cut(s) 71, 128, 291, 972, 1101
BssMI GATC 9 cut(s) 43, 174, 261, 417, 514, 752, 859, 991, 1085
BssT1I CCWWGG 1 cut(s) 291
Bst2UI CCWGG 3 cut(s) 633, 1001, 1102
Bst4CI ACNGT 1 cut(s) 72
Bst6I CTCTTC 1 cut(s) 1088
BstBI TTCGAA 1 cut(s) 795
BstC8I GCNNGC 2 cut(s) 253, 348
BstDEI CTNAG 3 cut(s) 828, 1089, 1152
BstDSI CCRYGG 1 cut(s) 71
BstEII GGTNACC 1 cut(s) 317
BstF5I GGATG 4 cut(s) 139, 487, 685, 994
BstH2I RGCGCY 1 cut(s) 1167
BstHHI GCGC 2 cut(s) 273, 1166
BstKTI GATC 9 cut(s) 46, 177, 264, 420, 517, 755, 862, 994, 1088
BstMAI GTCTC 1 cut(s) 117
BstMBI GATC 9 cut(s) 43, 174, 261, 417, 514, 752, 859, 991, 1085
BstMCI CGRYCG 2 cut(s) 71, 177
BstMWI GCNNNNNNNGC 4 cut(s) 277, 789, 798, 1052
BstNI CCWGG 3 cut(s) 633, 1001, 1102
BstPI GGTNACC 1 cut(s) 317
BstSCI CCNGG 4 cut(s) 631, 661, 999, 1100
BstSFI CTRYAG 1 cut(s) 1140
BstV1I GCAGC 1 cut(s) 1123
BstV2I GAAGAC 1 cut(s) 492
BstX2I RGATCY 3 cut(s) 43, 752, 1085
BstXI CCANNNNNNTGG 2 cut(s) 737, 1108
BstYI RGATCY 3 cut(s) 43, 752, 1085
BsuRI GGCC 3 cut(s) 164, 723, 971
BtgI CCRYGG 1 cut(s) 71
BtgZI GCGATG 2 cut(s) 121, 975
BtsCI GGATG 4 cut(s) 139, 487, 685, 994
BtsIMutI CAGTG 2 cut(s) 346, 401
Cac8I GCNNGC 2 cut(s) 253, 348
CfoI GCGC 2 cut(s) 273, 1166
Cfr13I GGNCC 5 cut(s) 493, 613, 969, 997, 1098
Csp6I GTAC 2 cut(s) 16, 288
CviAII CATG 9 cut(s) 256, 334, 490, 550, 610, 857, 899, 1126, 1191
CviQI GTAC 2 cut(s) 16, 288
DdeI CTNAG 3 cut(s) 828, 1089, 1152
DpnI GATC 9 cut(s) 45, 176, 263, 419, 516, 754, 861, 993, 1087
DpnII GATC 9 cut(s) 43, 174, 261, 417, 514, 752, 859, 991, 1085
EaeI YGGCCR 2 cut(s) 162, 721
Eam1104I CTCTTC 1 cut(s) 1088
EarI CTCTTC 1 cut(s) 1088
Ecl136II GAGCTC 2 cut(s) 1068, 1080
Eco130I CCWWGG 1 cut(s) 291
Eco24I GRGCYC 2 cut(s) 1070, 1082
Eco31I GGTCTC 1 cut(s) 117
Eco47I GGWCC 4 cut(s) 493, 613, 997, 1098
Eco53kI GAGCTC 2 cut(s) 1068, 1080
Eco57I CTGAAG 2 cut(s) 302, 1152
Eco88I CYCGRG 3 cut(s) 127, 973, 1081
Eco91I GGTNACC 1 cut(s) 317
EcoICRI GAGCTC 2 cut(s) 1068, 1080
EcoO109I RGGNCCY 1 cut(s) 969
EcoO65I GGTNACC 1 cut(s) 317
EcoRI GAATTC 1 cut(s) 26
EcoRII CCWGG 3 cut(s) 631, 999, 1100
EcoT14I CCWWGG 1 cut(s) 291
EcoT38I GRGCYC 2 cut(s) 1070, 1082
ErhI CCWWGG 1 cut(s) 291
FaeI CATG 9 cut(s) 259, 337, 493, 553, 613, 860, 902, 1129, 1194
FalI AAGNNNNNCTT 4 cut(s) 275, 307, 1030, 1062
FaqI GGGAC 1 cut(s) 479
FatI CATG 9 cut(s) 255, 333, 489, 549, 609, 856, 898, 1125, 1190
FbaI TGATCA 2 cut(s) 514, 991
Fnu4HI GCNGC 1 cut(s) 1137
FokI GGATG 4 cut(s) 146, 494, 692, 1001
FriOI GRGCYC 2 cut(s) 1070, 1082
Fsp4HI GCNGC 1 cut(s) 1137
FspBI CTAG 5 cut(s) 59, 246, 762, 789, 966
FspI TGCGCA 1 cut(s) 272
GlaI GCGC 2 cut(s) 272, 1165
GluI GCNGC 1 cut(s) 1137
GsuI CTGGAG 1 cut(s) 548
HaeII RGCGCY 1 cut(s) 1167
HaeIII GGCC 3 cut(s) 164, 723, 971
HapII CCGG 2 cut(s) 103, 662
HhaI GCGC 2 cut(s) 273, 1166
Hin1II CATG 9 cut(s) 259, 337, 493, 553, 613, 860, 902, 1129, 1194
Hin6I GCGC 2 cut(s) 271, 1164
HinP1I GCGC 2 cut(s) 271, 1164
HindIII AAGCTT 1 cut(s) 203
HinfI GANTC 3 cut(s) 64, 425, 895
HpaII CCGG 2 cut(s) 103, 662
HphI GGTGA 2 cut(s) 22, 329
Hpy188I TCNGA 2 cut(s) 541, 715
Hpy188III TCNNGA 8 cut(s) 47, 59, 518, 827, 995, 1061, 1083, 1115
HpyAV CCTTC 7 cut(s) 76, 126, 277, 436, 470, 742, 1032
HpyCH4III ACNGT 1 cut(s) 72
HpyCH4IV ACGT 1 cut(s) 510
HpyCH4V TGCA 7 cut(s) 181, 255, 434, 683, 846, 856, 943
HpyF10VI GCNNNNNNNGC 4 cut(s) 277, 789, 798, 1052
HpyF3I CTNAG 3 cut(s) 828, 1089, 1152
HpySE526I ACGT 1 cut(s) 510
Hsp92II CATG 9 cut(s) 259, 337, 493, 553, 613, 860, 902, 1129, 1194
HspAI GCGC 2 cut(s) 271, 1164
KpnI GGTACC 1 cut(s) 291
Ksp22I TGATCA 2 cut(s) 514, 991
Kzo9I GATC 9 cut(s) 43, 174, 261, 417, 514, 752, 859, 991, 1085
LmnI GCTCC 1 cut(s) 1077
Lsp1109I GCAGC 1 cut(s) 1123
LweI GCATC 3 cut(s) 124, 670, 952
MaeI CTAG 5 cut(s) 59, 246, 762, 789, 966
MaeII ACGT 1 cut(s) 510
MaeIII GTNAC 1 cut(s) 317
MalI GATC 9 cut(s) 45, 176, 263, 419, 516, 754, 861, 993, 1087
MboI GATC 9 cut(s) 43, 174, 261, 417, 514, 752, 859, 991, 1085
MboII GAAGA 8 cut(s) 232, 232, 317, 320, 485, 497, 810, 1105
MflI RGATCY 3 cut(s) 43, 752, 1085
MhlI GDGCHC 2 cut(s) 1070, 1082
MlsI TGGCCA 1 cut(s) 723
MluCI AATT 5 cut(s) 26, 666, 784, 864, 952
MluNI TGGCCA 1 cut(s) 723
MlyI GAGTC 2 cut(s) 419, 889
MmeI TCCRAC 2 cut(s) 617, 624
Mox20I TGGCCA 1 cut(s) 723
MscI TGGCCA 1 cut(s) 723
MseI TTAA 4 cut(s) 123, 525, 618, 1023
Msp20I TGGCCA 1 cut(s) 723
MspA1I CMGCKG 1 cut(s) 280
MspI CCGG 2 cut(s) 103, 662
MspR9I CCNGG 4 cut(s) 633, 663, 1001, 1102
MvaI CCWGG 3 cut(s) 633, 1001, 1102
MwoI GCNNNNNNNGC 4 cut(s) 277, 789, 798, 1052
NciI CCSGG 1 cut(s) 663
NdeII GATC 9 cut(s) 43, 174, 261, 417, 514, 752, 859, 991, 1085
NlaIII CATG 9 cut(s) 259, 337, 493, 553, 613, 860, 902, 1129, 1194
NlaIV GGNNCC 5 cut(s) 289, 495, 700, 754, 1182
NmuCI GTSAC 1 cut(s) 317
NsbI TGCGCA 1 cut(s) 272
NspV TTCGAA 1 cut(s) 795
PfeI GAWTC 1 cut(s) 64
PflFI GACNNNGTC 2 cut(s) 335, 491
PkrI GCNGC 1 cut(s) 1138
Ple19I CGATCG 1 cut(s) 177
PleI GAGTC 2 cut(s) 419, 889
PpsI GAGTC 2 cut(s) 419, 889
Psp124BI GAGCTC 2 cut(s) 1070, 1082
Psp6I CCWGG 3 cut(s) 631, 999, 1100
PspEI GGTNACC 1 cut(s) 317
PspGI CCWGG 3 cut(s) 631, 999, 1100
PspN4I GGNNCC 5 cut(s) 289, 495, 700, 754, 1182
PspPI GGNCC 5 cut(s) 493, 613, 969, 997, 1098
PsuI RGATCY 3 cut(s) 43, 752, 1085
PsyI GACNNNGTC 2 cut(s) 335, 491
PvuI CGATCG 1 cut(s) 177
RsaI GTAC 2 cut(s) 17, 289
RsaNI GTAC 2 cut(s) 16, 288
SacI GAGCTC 2 cut(s) 1070, 1082
SaqAI TTAA 4 cut(s) 123, 525, 618, 1023
SatI GCNGC 1 cut(s) 1137
Sau3AI GATC 9 cut(s) 43, 174, 261, 417, 514, 752, 859, 991, 1085
Sau96I GGNCC 5 cut(s) 493, 613, 969, 997, 1098
SchI GAGTC 2 cut(s) 419, 889
ScrFI CCNGG 4 cut(s) 633, 663, 1001, 1102
SduI GDGCHC 2 cut(s) 1070, 1082
SfaNI GCATC 3 cut(s) 124, 670, 952
SfcI CTRYAG 1 cut(s) 1140
SfuI TTCGAA 1 cut(s) 795
SinI GGWCC 4 cut(s) 493, 613, 997, 1098
SmlI CTYRAG 2 cut(s) 674, 1113
SmoI CTYRAG 2 cut(s) 674, 1113
Sse9I AATT 5 cut(s) 26, 666, 784, 864, 952
SsiI CCGC 2 cut(s) 137, 278
SspMI CTAG 5 cut(s) 59, 246, 762, 789, 966
SstI GAGCTC 2 cut(s) 1070, 1082
StyD4I CCNGG 4 cut(s) 631, 661, 999, 1100
StyI CCWWGG 1 cut(s) 291
TaaI ACNGT 1 cut(s) 72
TaiI ACGT 1 cut(s) 513
TaqI TCGA 6 cut(s) 48, 67, 264, 795, 862, 893
TasI AATT 5 cut(s) 26, 666, 784, 864, 952
TfiI GAWTC 1 cut(s) 64
Tru1I TTAA 4 cut(s) 123, 525, 618, 1023
Tru9I TTAA 4 cut(s) 123, 525, 618, 1023
TscAI CASTG 2 cut(s) 346, 401
TseFI GTSAC 1 cut(s) 317
TseI GCWGC 1 cut(s) 1136
Tsp45I GTSAC 1 cut(s) 317
TspDTI ATGAA 4 cut(s) 225, 498, 894, 1022
TspRI CASTG 2 cut(s) 346, 401
Tth111I GACNNNGTC 2 cut(s) 335, 491
VpaK11BI GGWCC 4 cut(s) 493, 613, 997, 1098
XapI RAATTY 2 cut(s) 26, 952
XbaI TCTAGA 1 cut(s) 58
XspI CTAG 5 cut(s) 59, 246, 762, 789, 966
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.