Rw0G009820

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00393
OG0000182
Physical Location & Seq
Reverse (-)
7324 .. 9198
1875 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G009820.1

Sequence Viewer

Length: 1524 bp
ATGATTACTCGGTATGTTAAATTTTTGCGTTTCCAGCTTACTGTCTTCACTCACCCAATGGCTTTTAGTCTGAATGCAAGGGCTCAAGCCAGCTCGTCGCGAAACCCTTTTAGCTTTTGGCAAATTCCCTTTCCCCGGCCTAGAGCTAATGAACCCCCTCTTAGCATCAACATTGGTGATACTAAGGTTAGGGTGGATCAGAAAGAAACCCATGTCACCATCAAAAGACCCCCTTCTGATTATGCTGAGCACTATCACCGGTACTGTTTGGTCGGAAGGATCTTTGGGAAACAGCTTGATGCCGATACTGTGATACAAAAGGCTGCACTTCTCTGGAGGGATGTTCAAGGCTCCCTCAGTCTGAACAAACTAGCCAACAACTGGTTCAGGCTCGAATTCTCCCTCGAAGATGATCTGCTTTACGTTCTCGATGAGCGCCCTTGGTACATCAAAGGGAGAATCTTTCATGTCCTGCGTTGGGTTCCTGGTTTTGATCTCCTCTTCACCAAGATTCAGCATTTGGTGGTTTGGATTCGCCTCCCAAACCTTCCTCTCCACTATTATGACCCCAAAGTCCTTGAGGATGCTGTTATGCCCTTAGGAAAAATTATCAAACTGGATGAAGCTACTGCTCAAGGCTCACAATGTATCTTTGCTCGGGTCTGTCTTGAAATTGATATCAGGCACCCTCTTACCCGAATTCTTGTCATCCACACTGAGGATGACCTAGATGATCCAGTTAGTGTTCGTGTTTCCTATGAAGGTCTGTTTGTGGTTTGCTTCCAATGCGGCAACCACAAACACAAAATCAATACCTGTCCTTTCAGAGTAAGAGAAGAAGATTTTATCCTAGTAGACCGCTTTTCAGATGATGATGAAGTTGAGCCCTCTGAGAAAGAACTTGCTCCTGAAATTAAAGCCTTACTTTCTGACAAAGTCATGGCAGCTTTTCCTCAGCCCAATACCTCTGTTCTTCGTGGTCAAGGCCCCACTGAATCCTTTGCTGAACAAAATGGGCAGGATGATATTAATCCCCTATCTCCAAACTGGACCCTTGTGACCAGGAAAAGGACTCCAGGTGCCAAGTCTTTTATTGGAAAACAAGGTAATGGCAGAGCCACTATTGGAACCAGATCCCTACCAACTCCAAACCGGAGTGGTTTAGTCAAAGATGGCATTTCCTTCAAAGATGCTACTAGGGGTGGTATCACTATTGGTAGCCCGCTTAGGACTATGAATACGATTGGAAATTCTGCTGCTGATCTTTCTCCCAACTCCCAGGACTTGGACAACTTTATGGATGCCAAAGAAGATGATGAAACTGCTTTCATCAATAATCTAATTGCTCCTGAAAATTCTGCCGTGGAGGCTTGGGACAACGACAACCTGGAAGATCACATGGAAGTTATCTCTGGATATCGTAGCCCACTGAAACGATCCAGAGACATGATGGATAATATGCCTACTGAGAATGACAAGAACAAGGAGGCTGGTCCCTCCCAATTTAATAAAATCTCTAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4283 RVT_1 RVT_3 zf-RVT

Protein Analysis

507

Amino Acids

57.59

Weight (kDa)

6.1

Isoelectric Point (pI)

41.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4283 PF14111 86 - 166 3.9e-13 Domain of unknown function (DUF4283)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000182)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g21471 FvH4_1g27953 FvH4_1g28801 FvH4_2g14522 FvH4_3g04280 FvH4_3g28251 FvH4_4g07491 FvH4_4g30262
malus_domestica MD10G1046400.v1.1 MD10G1126900.v1.1 MD11G1236100.v1.1
prunus_persica Prupe.1G148300_v2.0.a1 Prupe.2G036800_v2.0.a1 Prupe.8G054600_v2.0.a1 Prupe.8G054700_v2.0.a1
pyrus_communis pycom05g05520 pycom08g11160 pycom13g29480
rosa_chinensis RchiOBHm_Chr7g0182921 RchiOBHm_Chr7g0230111
rosa_laevigata RLG00000000536 RLG00000001385 RLG00000001492 RLG00000002640 RLG00000003082 RLG00000005042 RLG00000007254 RLG00000007773 RLG00000008594 RLG00000009508 RLG00000010355 RLG00000013369 RLG00000014370 RLG00000014371 RLG00000018745 RLG00000020268 RLG00000020832 RLG00000022569 RLG00000028073 RLG00000028388 RLG00000028677 RLG00000035645
rosa_multiflora Rmu_co8277499.1_g000001 Rmu_co8500999.1_g000001 Rmu_sc0000014.1_g000025 Rmu_sc0000103.1_g000003 Rmu_sc0000168.1_g000019 Rmu_sc0000283.1_g000006 Rmu_sc0000693.1_g000080 Rmu_sc0000997.1_g000005 Rmu_sc0001228.1_g000005 Rmu_sc0001231.1_g000023 Rmu_sc0002833.1_g000037 Rmu_sc0002869.1_g000015 Rmu_sc0003545.1_g000003 Rmu_sc0003693.1_g000028 Rmu_sc0004000.1_g000022 Rmu_sc0004454.1_g000007 Rmu_sc0004976.1_g000036 Rmu_sc0005014.1_g000013 Rmu_sc0005046.1_g000013 Rmu_sc0005063.1_g000009 Rmu_sc0005652.1_g000002 Rmu_sc0005697.1_g000008 Rmu_sc0006989.1_g000014 Rmu_sc0008957.1_g000003 Rmu_sc0011659.1_g000001 Rmu_sc0027477.1_g000001 Rmu_ssc0000387.1_g000021
rosa_roxburghii Rroxscaffold_1G00020860 Rroxscaffold_1G00035780 Rroxscaffold_1G00051370 Rroxscaffold_2G00101730 Rroxscaffold_3G00230130 Rroxscaffold_4G00280070 Rroxscaffold_4G00281160 Rroxscaffold_4G00318780 Rroxscaffold_5G00341570 Rroxscaffold_5G00341580 Rroxscaffold_7G00191230 Rroxscaffold_7G00195880 Rroxscaffold_7G00195890 Rroxscaffold_7G00209080 Rroxscaffold_7G00209090
rosa_rugosa Rorug02G0170400 Rorug03G0234500 Rorug04G0045200 Rorug07G0191000
rosa_samantha Rh1AG012200 Rh1AG012300 Rh1AG021700 Rh1AG033800 Rh1AG033900 Rh1AG048100 Rh1AG087000 Rh1AG168600 Rh1CG004600 Rh2BG192700 Rh2BG200800 Rh2BG310200 Rh2BG356900 Rh2BG377900 Rh2BG378000 Rh2CG356300 Rh2DG394800 Rh3AG199000 Rh3AG258700 Rh3AG258800 Rh3AG324400 Rh3BG202300 Rh3BG202400 Rh3BG228800 Rh3BG318800 Rh3BG360400 Rh3BG368300 Rh3BG373700 Rh4AG071400 Rh4AG153700 Rh4AG224300 Rh4AG224400 Rh4CG044000 Rh4CG077200 Rh4CG077300 Rh4CG238700 Rh4CG238800 Rh4CG238900 Rh5BG367100 Rh5BG379500 Rh5BG379600 Rh5BG396700 Rh5BG412900 Rh5DG427200 Rh6AG015200 Rh6AG015300 Rh6AG122800 Rh6AG175600 Rh6AG187700 Rh6AG187800 Rh6AG260800 Rh6AG355000 Rh6BG074900 Rh6BG102300 Rh7AG127400 Rh7AG157500 Rh7AG157600 Rh7AG212200 Rh7AG331400 Rh7AG412000 Rh7CG055400 Rh7CG131400 Rh7CG131500 Rh7CG224300 Rh7CG267100 Rh7CG348800
rosa_wichuraiana Rw0G009820 Rw1G000520 Rw1G008820 Rw4G014110 Rw4G019370 Rw4G022440 Rw6G010550 Rw7G001520 Rw7G018400 Rw7G025210 Rw7G027910

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 572
AccB1I GGYRCC 2 cut(s) 684, 1079
AccB7I CCANNNNNTGG 2 cut(s) 381, 1285
AccI GTMKAC 1 cut(s) 855
AccII CGCG 1 cut(s) 100
AciI CCGC 3 cut(s) 789, 859, 1223
AclWI GGATC 5 cut(s) 204, 287, 728, 1128, 1431
AcsI RAATTY 6 cut(s) 20, 123, 395, 699, 1249, 1354
AfaI GTAC 2 cut(s) 263, 446
AfiI CCNNNNNNNGG 6 cut(s) 135, 381, 478, 718, 1068, 1285
AgeI ACCGGT 1 cut(s) 258
AgsI TTSAA 3 cut(s) 347, 671, 1186
AjnI CCWGG 5 cut(s) 484, 1061, 1075, 1278, 1386
AjuI GAANNNNNNNTTGG 2 cut(s) 368, 400
AluBI AGCT 7 cut(s) 37, 93, 114, 146, 295, 626, 947
AluI AGCT 7 cut(s) 37, 93, 114, 146, 295, 626, 947
Alw21I GWGCWC 1 cut(s) 252
Alw26I GTCTC 1 cut(s) 1437
AlwI GGATC 5 cut(s) 204, 287, 728, 1128, 1431
Ama87I CYCGRG 1 cut(s) 657
AoxI GGCC 2 cut(s) 137, 985
ApeKI GCWGC 3 cut(s) 323, 944, 1256
ApoI RAATTY 6 cut(s) 20, 123, 395, 699, 1249, 1354
AseI ATTAAT 1 cut(s) 1029
AsiGI ACCGGT 1 cut(s) 258
AspLEI GCGC 1 cut(s) 438
AspS9I GGNCC 3 cut(s) 986, 1050, 1493
AsuC2I CCSGG 1 cut(s) 136
AsuHPI GGTGA 5 cut(s) 44, 188, 208, 248, 496
AvaI CYCGRG 1 cut(s) 657
AvaII GGWCC 2 cut(s) 1050, 1493
AxyI CCTNAGG 1 cut(s) 598
BaeI ACNNNNGTAYC 2 cut(s) 171, 204
BanI GGYRCC 2 cut(s) 684, 1079
BanII GRGCYC 2 cut(s) 85, 888
BbsI GAAGAC 1 cut(s) 37
Bbv12I GWGCWC 1 cut(s) 252
BbvCI CCTCAGC 1 cut(s) 954
BbvI GCAGC 3 cut(s) 310, 956, 1243
BccI CCATC 3 cut(s) 227, 1166, 1444
BceAI ACGGC 1 cut(s) 1346
BciT130I CCWGG 5 cut(s) 486, 1063, 1077, 1280, 1388
BcnI CCSGG 1 cut(s) 136
BcoDI GTCTC 1 cut(s) 1437
BfaI CTAG 5 cut(s) 141, 371, 728, 851, 1197
BfoI RGCGCY 1 cut(s) 439
BglI GCCNNNNNGGC 1 cut(s) 1367
BisI GCNGC 4 cut(s) 324, 790, 945, 1257
BlpI GCTNAGC 1 cut(s) 246
BlsI GCNGC 4 cut(s) 325, 791, 946, 1258
Bme1390I CCNGG 6 cut(s) 136, 486, 1063, 1077, 1280, 1388
Bme18I GGWCC 2 cut(s) 1050, 1493
BmeT110I CYCGRG 1 cut(s) 657
BmgT120I GGNCC 3 cut(s) 986, 1050, 1493
BmiI GGNNCC 8 cut(s) 352, 483, 686, 988, 1052, 1081, 1129, 1495
BmrFI CCNGG 6 cut(s) 136, 486, 1063, 1077, 1280, 1388
BmsI GCATC 5 cut(s) 174, 289, 574, 1180, 1291
BpiI GAAGAC 1 cut(s) 37
BpmI CTGGAG 2 cut(s) 355, 1059
Bpu10I CCTNAGC 2 cut(s) 954, 1226
Bpu1102I GCTNAGC 1 cut(s) 246
BpuEI CTTGAG 3 cut(s) 69, 599, 618
BpuMI CCSGG 1 cut(s) 136
BsaBI GATNNNNATC 1 cut(s) 1029
BsaJI CCNNGG 4 cut(s) 134, 440, 1278, 1362
BsaWI WCCGGW 2 cut(s) 258, 1152
Bsc4I CCNNNNNNNGG 6 cut(s) 135, 381, 478, 718, 1068, 1285
Bse118I RCCGGY 1 cut(s) 258
Bse1I ACTGG 4 cut(s) 386, 621, 737, 1052
Bse21I CCTNAGG 1 cut(s) 598
Bse8I GATNNNNATC 1 cut(s) 1029
BseBI CCWGG 5 cut(s) 486, 1063, 1077, 1280, 1388
BseDI CCNNGG 4 cut(s) 134, 440, 1278, 1362
BseGI GGATG 7 cut(s) 346, 589, 625, 708, 727, 1027, 1306
BseJI GATNNNNATC 1 cut(s) 1029
BseLI CCNNNNNNNGG 6 cut(s) 135, 381, 478, 718, 1068, 1285
BseMII CTCAG 6 cut(s) 237, 370, 708, 882, 968, 1458
BseNI ACTGG 4 cut(s) 386, 621, 737, 1052
BseRI GAGGAG 1 cut(s) 488
BseXI GCAGC 3 cut(s) 310, 956, 1243
BsgI GTGCAG 1 cut(s) 309
Bsh1236I CGCG 1 cut(s) 100
BshFI GGCC 2 cut(s) 139, 987
BshNI GGYRCC 2 cut(s) 684, 1079
BshTI ACCGGT 1 cut(s) 258
BsiHKAI GWGCWC 1 cut(s) 252
BsiHKCI CYCGRG 1 cut(s) 657
BsiSI CCGG 3 cut(s) 136, 259, 1153
BslFI GGGAC 2 cut(s) 1388, 1479
BslI CCNNNNNNNGG 6 cut(s) 135, 381, 478, 718, 1068, 1285
BsmAI GTCTC 1 cut(s) 1437
BsmFI GGGAC 2 cut(s) 1388, 1479
BsmI GAATGC 1 cut(s) 79
BsnI GGCC 2 cut(s) 139, 987
BsoBI CYCGRG 1 cut(s) 657
Bsp1286I GDGCHC 3 cut(s) 85, 252, 888
Bsp143I GATC 9 cut(s) 196, 279, 412, 493, 733, 1133, 1261, 1393, 1436
Bsp1720I GCTNAGC 1 cut(s) 246
Bsp68I TCGCGA 1 cut(s) 100
BspACI CCGC 3 cut(s) 789, 859, 1223
BspANI GGCC 2 cut(s) 139, 987
BspCNI CTCAG 6 cut(s) 238, 369, 709, 883, 967, 1459
BspFNI CGCG 1 cut(s) 100
BspLI GGNNCC 8 cut(s) 352, 483, 686, 988, 1052, 1081, 1129, 1495
BspPI GGATC 5 cut(s) 204, 287, 728, 1128, 1431
BspT107I GGYRCC 2 cut(s) 684, 1079
BsrFI RCCGGY 1 cut(s) 258
BsrI ACTGG 4 cut(s) 386, 621, 737, 1052
BssAI RCCGGY 1 cut(s) 258
BssECI CCNNGG 4 cut(s) 134, 440, 1278, 1362
BssMI GATC 9 cut(s) 196, 279, 412, 493, 733, 1133, 1261, 1393, 1436
BssT1I CCWWGG 1 cut(s) 440
Bst2UI CCWGG 5 cut(s) 486, 1063, 1077, 1280, 1388
Bst4CI ACNGT 3 cut(s) 43, 266, 310
Bst6I CTCTTC 1 cut(s) 506
BstC8I GCNNGC 2 cut(s) 91, 1223
BstDSI CCRYGG 1 cut(s) 1362
BstF5I GGATG 7 cut(s) 346, 589, 625, 708, 727, 1027, 1306
BstFNI CGCG 1 cut(s) 100
BstH2I RGCGCY 1 cut(s) 439
BstHHI GCGC 1 cut(s) 438
BstKTI GATC 9 cut(s) 199, 282, 415, 496, 736, 1136, 1264, 1396, 1439
BstMAI GTCTC 1 cut(s) 1437
BstMBI GATC 9 cut(s) 196, 279, 412, 493, 733, 1133, 1261, 1393, 1436
BstMWI GCNNNNNNNGC 3 cut(s) 34, 786, 1367
BstNI CCWGG 5 cut(s) 486, 1063, 1077, 1280, 1388
BstSCI CCNGG 6 cut(s) 134, 484, 1061, 1075, 1278, 1386
BstUI CGCG 1 cut(s) 100
BstV1I GCAGC 3 cut(s) 310, 956, 1243
BstV2I GAAGAC 1 cut(s) 37
BstX2I RGATCY 2 cut(s) 279, 1133
BstYI RGATCY 2 cut(s) 279, 1133
Bsu36I CCTNAGG 1 cut(s) 598
BsuRI GGCC 2 cut(s) 139, 987
BtgI CCRYGG 1 cut(s) 1362
BtsCI GGATG 7 cut(s) 346, 589, 625, 708, 727, 1027, 1306
BtsIMutI CAGTG 3 cut(s) 714, 990, 1427
BtuMI TCGCGA 1 cut(s) 100
Cac8I GCNNGC 2 cut(s) 91, 1223
CfoI GCGC 1 cut(s) 438
Cfr10I RCCGGY 1 cut(s) 258
Cfr13I GGNCC 3 cut(s) 986, 1050, 1493
Csp6I GTAC 2 cut(s) 262, 445
CspAI ACCGGT 1 cut(s) 258
CviAII CATG 5 cut(s) 212, 467, 940, 1399, 1447
CviQI GTAC 2 cut(s) 262, 445
DpnI GATC 9 cut(s) 198, 281, 414, 495, 735, 1135, 1263, 1395, 1438
DpnII GATC 9 cut(s) 196, 279, 412, 493, 733, 1133, 1261, 1393, 1436
DrdI GACNNNNNNGTC 1 cut(s) 572
DseDI GACNNNNNNGTC 1 cut(s) 572
Eam1104I CTCTTC 1 cut(s) 506
EarI CTCTTC 1 cut(s) 506
Eco130I CCWWGG 1 cut(s) 440
Eco24I GRGCYC 2 cut(s) 85, 888
Eco32I GATATC 2 cut(s) 679, 1418
Eco47I GGWCC 2 cut(s) 1050, 1493
Eco81I CCTNAGG 1 cut(s) 598
Eco88I CYCGRG 1 cut(s) 657
EcoO109I RGGNCCY 1 cut(s) 986
EcoRI GAATTC 2 cut(s) 395, 699
EcoRII CCWGG 5 cut(s) 484, 1061, 1075, 1278, 1386
EcoRV GATATC 2 cut(s) 679, 1418
EcoT14I CCWWGG 1 cut(s) 440
EcoT38I GRGCYC 2 cut(s) 85, 888
ErhI CCWWGG 1 cut(s) 440
FaeI CATG 5 cut(s) 215, 470, 943, 1402, 1450
FalI AAGNNNNNCTT 4 cut(s) 217, 249, 909, 941
FaqI GGGAC 2 cut(s) 1388, 1479
FatI CATG 5 cut(s) 211, 466, 939, 1398, 1446
FauI CCCGC 1 cut(s) 1230
FblI GTMKAC 1 cut(s) 855
Fnu4HI GCNGC 4 cut(s) 324, 790, 945, 1257
FokI GGATG 7 cut(s) 353, 596, 632, 695, 734, 1034, 1313
FriOI GRGCYC 2 cut(s) 85, 888
Fsp4HI GCNGC 4 cut(s) 324, 790, 945, 1257
FspBI CTAG 5 cut(s) 141, 371, 728, 851, 1197
GlaI GCGC 1 cut(s) 437
GluI GCNGC 4 cut(s) 324, 790, 945, 1257
GsuI CTGGAG 2 cut(s) 355, 1059
HaeII RGCGCY 1 cut(s) 439
HaeIII GGCC 2 cut(s) 139, 987
HapII CCGG 3 cut(s) 136, 259, 1153
HhaI GCGC 1 cut(s) 438
Hin1II CATG 5 cut(s) 215, 470, 943, 1402, 1450
Hin6I GCGC 1 cut(s) 436
HinP1I GCGC 1 cut(s) 436
HinfI GANTC 5 cut(s) 459, 511, 532, 995, 1072
HpaII CCGG 3 cut(s) 136, 259, 1153
HphI GGTGA 5 cut(s) 44, 188, 208, 248, 496
Hpy166II GTNNAC 1 cut(s) 856
Hpy188I TCNGA 9 cut(s) 72, 201, 238, 275, 363, 827, 868, 892, 931
Hpy188III TCNNGA 8 cut(s) 99, 334, 428, 668, 908, 1349, 1413, 1440
Hpy8I GTNNAC 1 cut(s) 856
Hpy99I CGWCG 1 cut(s) 100
HpyAV CCTTC 5 cut(s) 243, 270, 557, 755, 1192
HpyCH4III ACNGT 3 cut(s) 43, 266, 310
HpyCH4IV ACGT 1 cut(s) 423
HpyCH4V TGCA 2 cut(s) 77, 326
HpyF10VI GCNNNNNNNGC 3 cut(s) 34, 786, 1367
HpySE526I ACGT 1 cut(s) 423
Hsp92II CATG 5 cut(s) 215, 470, 943, 1402, 1450
HspAI GCGC 1 cut(s) 436
Kzo9I GATC 9 cut(s) 196, 279, 412, 493, 733, 1133, 1261, 1393, 1436
LmnI GCTCC 3 cut(s) 356, 910, 1351
Lsp1109I GCAGC 3 cut(s) 310, 956, 1243
LweI GCATC 5 cut(s) 174, 289, 574, 1180, 1291
MaeI CTAG 5 cut(s) 141, 371, 728, 851, 1197
MaeII ACGT 1 cut(s) 423
MaeIII GTNAC 2 cut(s) 214, 1057
MalI GATC 9 cut(s) 198, 281, 414, 495, 735, 1135, 1263, 1395, 1438
MboI GATC 9 cut(s) 196, 279, 412, 493, 733, 1133, 1261, 1393, 1436
MboII GAAGA 8 cut(s) 37, 419, 493, 848, 851, 965, 1322, 1403
MflI RGATCY 2 cut(s) 279, 1133
MhlI GDGCHC 3 cut(s) 85, 252, 888
MlyI GAGTC 1 cut(s) 1066
MmeI TCCRAC 1 cut(s) 253
MseI TTAA 4 cut(s) 18, 915, 1029, 1506
MslI CAYNNNNRTG 1 cut(s) 561
MspI CCGG 3 cut(s) 136, 259, 1153
MspR9I CCNGG 6 cut(s) 136, 486, 1063, 1077, 1280, 1388
Mva1269I GAATGC 1 cut(s) 79
MvaI CCWGG 5 cut(s) 486, 1063, 1077, 1280, 1388
MvnI CGCG 1 cut(s) 100
MwoI GCNNNNNNNGC 3 cut(s) 34, 786, 1367
NciI CCSGG 1 cut(s) 136
NdeII GATC 9 cut(s) 196, 279, 412, 493, 733, 1133, 1261, 1393, 1436
NlaIII CATG 5 cut(s) 215, 470, 943, 1402, 1450
NlaIV GGNNCC 8 cut(s) 352, 483, 686, 988, 1052, 1081, 1129, 1495
NmuCI GTSAC 2 cut(s) 214, 1057
NruI TCGCGA 1 cut(s) 100
PctI GAATGC 1 cut(s) 79
PfeI GAWTC 4 cut(s) 459, 511, 532, 995
PflFI GACNNNGTC 1 cut(s) 935
PflMI CCANNNNNTGG 2 cut(s) 381, 1285
PinAI ACCGGT 1 cut(s) 258
PkrI GCNGC 4 cut(s) 325, 791, 946, 1258
PleI GAGTC 1 cut(s) 1066
PpsI GAGTC 1 cut(s) 1066
PshBI ATTAAT 1 cut(s) 1029
Psp6I CCWGG 5 cut(s) 484, 1061, 1075, 1278, 1386
PspGI CCWGG 5 cut(s) 484, 1061, 1075, 1278, 1386
PspN4I GGNNCC 8 cut(s) 352, 483, 686, 988, 1052, 1081, 1129, 1495
PspPI GGNCC 3 cut(s) 986, 1050, 1493
PsuI RGATCY 2 cut(s) 279, 1133
PsyI GACNNNGTC 1 cut(s) 935
RruI TCGCGA 1 cut(s) 100
RsaI GTAC 2 cut(s) 263, 446
RsaNI GTAC 2 cut(s) 262, 445
RseI CAYNNNNRTG 1 cut(s) 561
SaqAI TTAA 4 cut(s) 18, 915, 1029, 1506
SatI GCNGC 4 cut(s) 324, 790, 945, 1257
Sau3AI GATC 9 cut(s) 196, 279, 412, 493, 733, 1133, 1261, 1393, 1436
Sau96I GGNCC 3 cut(s) 986, 1050, 1493
SchI GAGTC 1 cut(s) 1066
ScrFI CCNGG 6 cut(s) 136, 486, 1063, 1077, 1280, 1388
SduI GDGCHC 3 cut(s) 85, 252, 888
SfaNI GCATC 5 cut(s) 174, 289, 574, 1180, 1291
SinI GGWCC 2 cut(s) 1050, 1493
SmiMI CAYNNNNRTG 1 cut(s) 561
SmlI CTYRAG 3 cut(s) 84, 578, 633
SmoI CTYRAG 3 cut(s) 84, 578, 633
SsiI CCGC 3 cut(s) 789, 859, 1223
SspMI CTAG 5 cut(s) 141, 371, 728, 851, 1197
StyD4I CCNGG 6 cut(s) 134, 484, 1061, 1075, 1278, 1386
StyI CCWWGG 1 cut(s) 440
TaaI ACNGT 3 cut(s) 43, 266, 310
TaiI ACGT 1 cut(s) 426
TaqI TCGA 3 cut(s) 393, 405, 429
TauI GCSGC 1 cut(s) 792
TfiI GAWTC 4 cut(s) 459, 511, 532, 995
Tru1I TTAA 4 cut(s) 18, 915, 1029, 1506
Tru9I TTAA 4 cut(s) 18, 915, 1029, 1506
TscAI CASTG 3 cut(s) 721, 997, 1434
TseFI GTSAC 2 cut(s) 214, 1057
TseI GCWGC 3 cut(s) 323, 944, 1256
Tsp45I GTSAC 2 cut(s) 214, 1057
TspDTI ATGAA 8 cut(s) 165, 455, 636, 774, 891, 1250, 1318, 1332
TspRI CASTG 3 cut(s) 721, 997, 1434
Tth111I GACNNNGTC 1 cut(s) 935
Van91I CCANNNNNTGG 2 cut(s) 381, 1285
VpaK11BI GGWCC 2 cut(s) 1050, 1493
VspI ATTAAT 1 cut(s) 1029
XapI RAATTY 6 cut(s) 20, 123, 395, 699, 1249, 1354
XcmI CCANNNNNNNNNTGG 1 cut(s) 1447
XmiI GTMKAC 1 cut(s) 855
XspI CTAG 5 cut(s) 141, 371, 728, 851, 1197
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.