Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 362 |
| AcsI | RAATTY | 1 cut(s) | 139 |
| AfaI | GTAC | 1 cut(s) | 356 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 124, 367, 434 |
| AgsI | TTSAA | 4 cut(s) | 11, 68, 89, 190 |
| AluBI | AGCT | 1 cut(s) | 335 |
| AluI | AGCT | 1 cut(s) | 335 |
| Alw21I | GWGCWC | 1 cut(s) | 132 |
| ApeKI | GCWGC | 1 cut(s) | 364 |
| ApoI | RAATTY | 1 cut(s) | 139 |
| AspS9I | GGNCC | 2 cut(s) | 115, 415 |
| AsuC2I | CCSGG | 1 cut(s) | 435 |
| AvaII | GGWCC | 2 cut(s) | 115, 415 |
| Bbv12I | GWGCWC | 1 cut(s) | 132 |
| BbvI | GCAGC | 1 cut(s) | 376 |
| BccI | CCATC | 1 cut(s) | 269 |
| BcnI | CCSGG | 1 cut(s) | 435 |
| BfaI | CTAG | 3 cut(s) | 242, 260, 439 |
| BisI | GCNGC | 1 cut(s) | 365 |
| BlsI | GCNGC | 1 cut(s) | 366 |
| Bme1390I | CCNGG | 1 cut(s) | 435 |
| Bme18I | GGWCC | 2 cut(s) | 115, 415 |
| BmgT120I | GGNCC | 2 cut(s) | 115, 415 |
| BmrFI | CCNGG | 1 cut(s) | 435 |
| BpmI | CTGGAG | 1 cut(s) | 174 |
| BpuMI | CCSGG | 1 cut(s) | 435 |
| Bsa29I | ATCGAT | 1 cut(s) | 171 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 124, 367, 434 |
| Bse118I | RCCGGY | 1 cut(s) | 367 |
| BseCI | ATCGAT | 1 cut(s) | 171 |
| BseGI | GGATG | 2 cut(s) | 223, 280 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 124, 367, 434 |
| BseMII | CTCAG | 1 cut(s) | 190 |
| BseRI | GAGGAG | 1 cut(s) | 227 |
| BseXI | GCAGC | 1 cut(s) | 376 |
| BshVI | ATCGAT | 1 cut(s) | 171 |
| BsiHKAI | GWGCWC | 1 cut(s) | 132 |
| BsiSI | CCGG | 2 cut(s) | 368, 435 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 124, 367, 434 |
| Bsp1286I | GDGCHC | 1 cut(s) | 132 |
| Bsp143I | GATC | 2 cut(s) | 168, 172 |
| BspACI | CCGC | 1 cut(s) | 362 |
| BspCNI | CTCAG | 1 cut(s) | 189 |
| BspDI | ATCGAT | 1 cut(s) | 171 |
| BsrFI | RCCGGY | 1 cut(s) | 367 |
| BssAI | RCCGGY | 1 cut(s) | 367 |
| BssMI | GATC | 2 cut(s) | 168, 172 |
| Bst4CI | ACNGT | 3 cut(s) | 54, 134, 330 |
| BstC8I | GCNNGC | 1 cut(s) | 369 |
| BstDEI | CTNAG | 2 cut(s) | 94, 176 |
| BstF5I | GGATG | 2 cut(s) | 223, 280 |
| BstKTI | GATC | 2 cut(s) | 171, 175 |
| BstMBI | GATC | 2 cut(s) | 168, 172 |
| BstSCI | CCNGG | 1 cut(s) | 433 |
| BstV1I | GCAGC | 1 cut(s) | 376 |
| Bsu15I | ATCGAT | 1 cut(s) | 171 |
| BsuTUI | ATCGAT | 1 cut(s) | 171 |
| BtsCI | GGATG | 2 cut(s) | 223, 280 |
| BtsIMutI | CAGTG | 1 cut(s) | 139 |
| Cac8I | GCNNGC | 1 cut(s) | 369 |
| Cfr10I | RCCGGY | 1 cut(s) | 367 |
| Cfr13I | GGNCC | 2 cut(s) | 115, 415 |
| ClaI | ATCGAT | 1 cut(s) | 171 |
| Csp6I | GTAC | 1 cut(s) | 355 |
| CviJI | RGCY | 4 cut(s) | 34, 335, 367, 438 |
| CviKI_1 | RGCY | 4 cut(s) | 34, 335, 367, 438 |
| CviQI | GTAC | 1 cut(s) | 355 |
| DdeI | CTNAG | 2 cut(s) | 94, 176 |
| DpnI | GATC | 2 cut(s) | 170, 174 |
| DpnII | GATC | 2 cut(s) | 168, 172 |
| Eco47I | GGWCC | 2 cut(s) | 115, 415 |
| FaiI | YATR | 6 cut(s) | 164, 290, 305, 339, 350, 386 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 365, 397 |
| FauI | CCCGC | 1 cut(s) | 369 |
| Fnu4HI | GCNGC | 1 cut(s) | 365 |
| FokI | GGATG | 2 cut(s) | 230, 287 |
| Fsp4HI | GCNGC | 1 cut(s) | 365 |
| FspBI | CTAG | 3 cut(s) | 242, 260, 439 |
| GluI | GCNGC | 1 cut(s) | 365 |
| GsuI | CTGGAG | 1 cut(s) | 174 |
| HapII | CCGG | 2 cut(s) | 368, 435 |
| HincII | GTYRAC | 2 cut(s) | 265, 378 |
| HindII | GTYRAC | 2 cut(s) | 265, 378 |
| HinfI | GANTC | 2 cut(s) | 102, 314 |
| HpaII | CCGG | 2 cut(s) | 368, 435 |
| Hpy166II | GTNNAC | 4 cut(s) | 265, 355, 378, 415 |
| Hpy188I | TCNGA | 1 cut(s) | 179 |
| Hpy8I | GTNNAC | 4 cut(s) | 265, 355, 378, 415 |
| HpyAV | CCTTC | 1 cut(s) | 438 |
| HpyCH4III | ACNGT | 3 cut(s) | 54, 134, 330 |
| HpyF3I | CTNAG | 2 cut(s) | 94, 176 |
| KroI | GCCGGC | 1 cut(s) | 367 |
| KroNI | GCCGGC | 1 cut(s) | 369 |
| Kzo9I | GATC | 2 cut(s) | 168, 172 |
| LmnI | GCTCC | 2 cut(s) | 60, 127 |
| LpnPI | CCDG | 4 cut(s) | 131, 138, 185, 381 |
| Lsp1109I | GCAGC | 1 cut(s) | 376 |
| MaeI | CTAG | 3 cut(s) | 242, 260, 439 |
| MalI | GATC | 2 cut(s) | 170, 174 |
| MboI | GATC | 2 cut(s) | 168, 172 |
| MboII | GAAGA | 2 cut(s) | 139, 311 |
| MhlI | GDGCHC | 1 cut(s) | 132 |
| MluCI | AATT | 2 cut(s) | 110, 139 |
| MnlI | CCTC | 9 cut(s) | 26, 205, 208, 265, 277, 301, 305, 413, 428 |
| MroNI | GCCGGC | 1 cut(s) | 367 |
| MspI | CCGG | 2 cut(s) | 368, 435 |
| MspR9I | CCNGG | 1 cut(s) | 435 |
| NaeI | GCCGGC | 1 cut(s) | 369 |
| NciI | CCSGG | 1 cut(s) | 435 |
| NdeII | GATC | 2 cut(s) | 168, 172 |
| NgoMIV | GCCGGC | 1 cut(s) | 367 |
| PdiI | GCCGGC | 1 cut(s) | 369 |
| PfeI | GAWTC | 2 cut(s) | 102, 314 |
| PkrI | GCNGC | 1 cut(s) | 366 |
| PspPI | GGNCC | 2 cut(s) | 115, 415 |
| RsaI | GTAC | 1 cut(s) | 356 |
| RsaNI | GTAC | 1 cut(s) | 355 |
| SatI | GCNGC | 1 cut(s) | 365 |
| Sau3AI | GATC | 2 cut(s) | 168, 172 |
| Sau96I | GGNCC | 2 cut(s) | 115, 415 |
| ScrFI | CCNGG | 1 cut(s) | 435 |
| SduI | GDGCHC | 1 cut(s) | 132 |
| SetI | ASST | 7 cut(s) | 45, 312, 337, 383, 405, 420, 430 |
| SinI | GGWCC | 2 cut(s) | 115, 415 |
| Sse9I | AATT | 2 cut(s) | 110, 139 |
| SsiI | CCGC | 1 cut(s) | 362 |
| SspMI | CTAG | 3 cut(s) | 242, 260, 439 |
| StyD4I | CCNGG | 1 cut(s) | 433 |
| TaaI | ACNGT | 3 cut(s) | 54, 134, 330 |
| TaqI | TCGA | 3 cut(s) | 47, 171, 297 |
| TasI | AATT | 2 cut(s) | 110, 139 |
| TatI | WGTACW | 1 cut(s) | 354 |
| TfiI | GAWTC | 2 cut(s) | 102, 314 |
| TscAI | CASTG | 1 cut(s) | 139 |
| TseI | GCWGC | 1 cut(s) | 364 |
| TspDTI | ATGAA | 4 cut(s) | 94, 133, 234, 354 |
| TspGWI | ACGGA | 1 cut(s) | 140 |
| TspRI | CASTG | 1 cut(s) | 139 |
| VpaK11BI | GGWCC | 2 cut(s) | 115, 415 |
| XapI | RAATTY | 1 cut(s) | 139 |
| XspI | CTAG | 3 cut(s) | 242, 260, 439 |